ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63o11 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 325 bits (833), Expect = 6e-89 Identities = 162/192 (84%), Positives = 176/192 (91%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+FQME TGVTF+DVAGVDEAK++F EVV FLKKPERFTAVGA+IPKGVLLVGPPG Sbjct: 157 KSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPG 216 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN+PCIVF+DEIDA Sbjct: 217 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDA 276 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LD+ALLRPGRFDR Sbjct: 277 VGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDR 336 Query: 576 QVSVDVPDVRGR 611 QV+VDVPDV+GR Sbjct: 337 QVTVDVPDVKGR 348
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 320 bits (820), Expect = 2e-87 Identities = 162/192 (84%), Positives = 173/192 (90%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTAVGA+IPKGVLLVGPPG Sbjct: 157 KSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPG 216 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPCIVF+DEIDA Sbjct: 217 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDA 276 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDR Sbjct: 277 VGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDR 336 Query: 576 QVSVDVPDVRGR 611 QVSVDVPD RGR Sbjct: 337 QVSVDVPDFRGR 348
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 314 bits (805), Expect = 1e-85 Identities = 155/192 (80%), Positives = 170/192 (88%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+FQM+ TGV FDDVAG+DEAK++ EVV FLK+PERFTAVGA+IPKGVLLVGPPG Sbjct: 156 KSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPG 215 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC++F+DEIDA Sbjct: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDA 275 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LDSAL+RPGRFDR Sbjct: 276 VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDR 335 Query: 576 QVSVDVPDVRGR 611 QV VD PD GR Sbjct: 336 QVMVDAPDYSGR 347
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 312 bits (800), Expect = 4e-85 Identities = 154/192 (80%), Positives = 172/192 (89%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+FQME TGV FDDVAG+DEAK++ EVV FLK+PE+FTA+GA+IP+GVLL+GPPG Sbjct: 195 KSKARFQMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPG 254 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC+VF+DEIDA Sbjct: 255 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDA 314 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGFEGN+GIIV+AATNR D+LD ALLRPGRFDR Sbjct: 315 VGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDR 374 Query: 576 QVSVDVPDVRGR 611 QV+VD PDV+GR Sbjct: 375 QVTVDYPDVQGR 386
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 299 bits (765), Expect = 5e-81 Identities = 147/192 (76%), Positives = 165/192 (85%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+FQM TG+ FDDVAG++EAK++ EVV FLK P +F AVGA IPKGVLLVGPPG Sbjct: 138 KSKARFQMVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLVGPPG 197 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPC+VF+DEIDA Sbjct: 198 TGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDA 257 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGFEGNTG+IV+AATNR D+LD+ALLRPGRFDR Sbjct: 258 VGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDR 317 Query: 576 QVSVDVPDVRGR 611 Q+ V +PDV+ R Sbjct: 318 QIMVSMPDVKSR 329
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 295 bits (756), Expect = 5e-80 Identities = 148/192 (77%), Positives = 165/192 (85%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ QMEP T VTF DVAG+++AK + EVV+FLK +RFT +GA+IPKGVLLVGPPG Sbjct: 145 KSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIPKGVLLVGPPG 204 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK NAPCIVF+DEIDA Sbjct: 205 TGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDA 264 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGFEGNTGII+VAATNR D+LDSAL+RPGRFDR Sbjct: 265 VGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDR 324 Query: 576 QVSVDVPDVRGR 611 QV VD PD GR Sbjct: 325 QVVVDRPDYAGR 336
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 288 bits (737), Expect = 9e-78 Identities = 142/192 (73%), Positives = 161/192 (83%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 ++KA+F ME TG+ F+DVAG++EAK++ E+V FLK +FT VGA IPKGVLLVGPPG Sbjct: 155 KAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLVGPPG 214 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APCIVF+DEIDA Sbjct: 215 TGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDA 274 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGF G+TG+IVVAATNR D+LDSALLRPGRFDR Sbjct: 275 VGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDR 334 Query: 576 QVSVDVPDVRGR 611 Q+ V +P++ GR Sbjct: 335 QIMVSLPNINGR 346
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 288 bits (736), Expect = 1e-77 Identities = 141/192 (73%), Positives = 163/192 (84%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPG Sbjct: 234 RSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 293 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDA Sbjct: 294 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 353 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDR Sbjct: 354 VGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 413 Query: 576 QVSVDVPDVRGR 611 QV+VD PDV GR Sbjct: 414 QVTVDRPDVAGR 425
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 287 bits (735), Expect = 1e-77 Identities = 141/192 (73%), Positives = 163/192 (84%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPG Sbjct: 237 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 296 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDA Sbjct: 297 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 356 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDR Sbjct: 357 VGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 416 Query: 576 QVSVDVPDVRGR 611 QV+VD PDV GR Sbjct: 417 QVTVDRPDVAGR 428
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 286 bits (732), Expect = 3e-77 Identities = 138/192 (71%), Positives = 165/192 (85%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S A+F+ P+TGV+F D+AG+DEAK +F E+V FLK+P+++T VGA+IPKG+LLVGPPG Sbjct: 170 KSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPG 229 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENAPCIVF+DEIDA Sbjct: 230 TGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDA 289 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLLTEMDGF+ N G+IVV ATNRADILD+ALLRPGRFDR Sbjct: 290 VGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDR 349 Query: 576 QVSVDVPDVRGR 611 QV+V++PD GR Sbjct: 350 QVTVNLPDRLGR 361
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 286 bits (731), Expect = 4e-77 Identities = 140/192 (72%), Positives = 162/192 (84%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPG Sbjct: 237 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 296 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAG PFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDA Sbjct: 297 TGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 356 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDR Sbjct: 357 VGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 416 Query: 576 QVSVDVPDVRGR 611 QV+VD PDV GR Sbjct: 417 QVTVDRPDVAGR 428
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 286 bits (731), Expect = 4e-77 Identities = 140/192 (72%), Positives = 163/192 (84%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SK+KFQ P TGV+F DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPG Sbjct: 246 RSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 305 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDA Sbjct: 306 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDA 365 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDR Sbjct: 366 VGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 425 Query: 576 QVSVDVPDVRGR 611 QV+VD PDV GR Sbjct: 426 QVTVDRPDVAGR 437
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 281 bits (720), Expect = 8e-76 Identities = 138/192 (71%), Positives = 161/192 (83%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPG Sbjct: 214 RSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPG 273 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVR LF+ AK APCIVF+DEIDA Sbjct: 274 TGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDA 333 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPG+FDR Sbjct: 334 VGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDR 393 Query: 576 QVSVDVPDVRGR 611 QV+VD PDV GR Sbjct: 394 QVTVDRPDVAGR 405
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 278 bits (712), Expect = 7e-75 Identities = 139/192 (72%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKAK E F DVAG DE KQ+ +EVVEFLK P +F+A+GARIPKGVLLVGPPG Sbjct: 150 KSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLVGPPG 209 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAPCI+F+DEIDA Sbjct: 210 TGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDA 269 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQLL EMDGF N GII++AATNRADILD ALLRPGRFDR Sbjct: 270 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDR 329 Query: 576 QVSVDVPDVRGR 611 Q+ V+ PDV GR Sbjct: 330 QIQVNRPDVNGR 341
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 278 bits (710), Expect = 1e-74 Identities = 140/192 (72%), Positives = 156/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKAK E V F DVAG DE KQ+ +EVVEFLK P +F +GARIPKGVLLVGPPG Sbjct: 145 KSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPG 204 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKA AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAPC++F+DEIDA Sbjct: 205 TGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDA 264 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQLL EMDGF N GII++AATNRADILD ALLRPGRFDR Sbjct: 265 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDR 324 Query: 576 QVSVDVPDVRGR 611 Q++VD PDV GR Sbjct: 325 QITVDRPDVIGR 336
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 268 bits (685), Expect = 9e-72 Identities = 133/192 (69%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPG Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PDVRGR Sbjct: 316 QVVVGLPDVRGR 327
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 268 bits (685), Expect = 9e-72 Identities = 133/192 (69%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPG Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PDVRGR Sbjct: 316 QVVVGLPDVRGR 327
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 268 bits (685), Expect = 9e-72 Identities = 133/192 (69%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPG Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PDVRGR Sbjct: 316 QVVVGLPDVRGR 327
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 268 bits (685), Expect = 9e-72 Identities = 133/192 (69%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPG Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PDVRGR Sbjct: 316 QVVVGLPDVRGR 327
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 268 bits (685), Expect = 9e-72 Identities = 133/192 (69%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPG Sbjct: 136 KSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PDVRGR Sbjct: 316 QVVVGLPDVRGR 327
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 267 bits (683), Expect = 2e-71 Identities = 137/192 (71%), Positives = 156/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARIP GVLL GPPG Sbjct: 171 RSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPG 230 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ AP I+F+DEIDA Sbjct: 231 TGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDA 290 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLRPGRFDR Sbjct: 291 VGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDR 350 Query: 576 QVSVDVPDVRGR 611 +V V PDV+GR Sbjct: 351 KVLVGRPDVKGR 362
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 267 bits (683), Expect = 2e-71 Identities = 137/192 (71%), Positives = 156/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARIP GVLL GPPG Sbjct: 171 RSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPG 230 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ AP I+F+DEIDA Sbjct: 231 TGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDA 290 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLRPGRFDR Sbjct: 291 VGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDR 350 Query: 576 QVSVDVPDVRGR 611 +V V PDV+GR Sbjct: 351 KVLVGRPDVKGR 362
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 265 bits (678), Expect = 6e-71 Identities = 125/192 (65%), Positives = 154/192 (80%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ + +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPKG LL+GPPG Sbjct: 139 KSKARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPG 198 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPCI+F+DEIDA Sbjct: 199 TGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA 258 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQ+L EMDGFE N G++++AATNR D+LD ALLRPGRFDR Sbjct: 259 VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDR 318 Query: 576 QVSVDVPDVRGR 611 Q++V PD+ GR Sbjct: 319 QIAVANPDINGR 330
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 265 bits (678), Expect = 6e-71 Identities = 125/192 (65%), Positives = 154/192 (80%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ + +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPKG LL+GPPG Sbjct: 139 KSKARLLSDKGPKITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPG 198 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPCI+F+DEIDA Sbjct: 199 TGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDA 258 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V NDEREQTLNQ+L EMDGFE N G++++AATNR D+LD ALLRPGRFDR Sbjct: 259 VGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDR 318 Query: 576 QVSVDVPDVRGR 611 Q++V PD+ GR Sbjct: 319 QIAVANPDINGR 330
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 265 bits (677), Expect = 8e-71 Identities = 129/192 (67%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+VGPPG Sbjct: 136 KSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ A+++APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGF+GN G+I++AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PDVRGR Sbjct: 316 QVIVALPDVRGR 327
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 264 bits (675), Expect = 1e-70 Identities = 127/192 (66%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E +TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+VGPPG Sbjct: 136 KSKARMLPEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ +++ APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 Q+ V +PD+RGR Sbjct: 316 QIFVALPDIRGR 327
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 264 bits (674), Expect = 2e-70 Identities = 128/192 (66%), Positives = 157/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+VGPPG Sbjct: 136 KSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPG 195 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ ++++APCI+F+DEIDA Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDA 255 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD ALLRPGRFDR Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDR 315 Query: 576 QVSVDVPDVRGR 611 QV V +PD+RGR Sbjct: 316 QVIVALPDIRGR 327
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 261 bits (667), Expect = 1e-69 Identities = 126/192 (65%), Positives = 156/192 (81%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S+AK + VTF DVAG DEAK++ E+V+FL+ P +F +G +IPKG+L+VGPPG Sbjct: 135 KSRAKMLNQDQIKVTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPG 194 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAPC++F+DEIDA Sbjct: 195 TGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDA 254 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDR Sbjct: 255 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDR 314 Query: 576 QVSVDVPDVRGR 611 QV V +PDV+GR Sbjct: 315 QVVVGLPDVKGR 326
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 258 bits (659), Expect = 1e-68 Identities = 136/195 (69%), Positives = 158/195 (81%), Gaps = 3/195 (1%) Frame = +3 Query: 36 QSKAKFQME-PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 212 +SKAK +E +T VTFDDVAGV+EAK + EVV+FLK P+R+TA+GA+IPKGVLLVGPP Sbjct: 157 KSKAKVYVEGDSTKVTFDDVAGVEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVGPP 216 Query: 213 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 392 GTGKTLLAKA AGEAGVPFF ISGSEFVE+FVG GA+RVRDLF++AK+ APCIVF+DE+D Sbjct: 217 GTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELD 276 Query: 393 AV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGR 566 A+ NDEREQTLNQLLTEMDGF +IV+AATNR + LD ALLRPGR Sbjct: 277 AIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGR 336 Query: 567 FDRQVSVDVPDVRGR 611 FDRQV VD PD+ GR Sbjct: 337 FDRQVLVDRPDLAGR 351
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 256 bits (653), Expect = 5e-68 Identities = 127/192 (66%), Positives = 153/192 (79%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IPKGVLL GPPG Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPG 206 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDA Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQLL EMDGF G+I++AATNR DILD ALLRPGRFDR Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDR 326 Query: 576 QVSVDVPDVRGR 611 Q+ V PD+ GR Sbjct: 327 QIPVSNPDLAGR 338
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 256 bits (653), Expect = 5e-68 Identities = 127/192 (66%), Positives = 153/192 (79%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IPKGVLL GPPG Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPG 206 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDA Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDA 266 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQLL EMDGF G+I++AATNR DILD ALLRPGRFDR Sbjct: 267 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDR 326 Query: 576 QVSVDVPDVRGR 611 Q+ V PD+ GR Sbjct: 327 QIPVSNPDLAGR 338
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 254 bits (650), Expect = 1e-67 Identities = 123/177 (69%), Positives = 150/177 (84%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 260 F DVAGVDEAK++ MEVV+FLK P+++T +G +IP+GVLLVGPPGTGKTLLA+A+AGEA Sbjct: 140 FADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEAS 199 Query: 261 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 440 VPFF ISGS+F+EMFVG+GASRVRDLFK+A+E AP I+F+DE+DA+ NDE Sbjct: 200 VPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAI-GKSRLNAIHSNDE 258 Query: 441 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 REQTLNQLL EMDGF+ TG+I++AATNR D+LD ALLRPGRFDRQV VD PD++GR Sbjct: 259 REQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGR 315
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 252 bits (643), Expect = 7e-67 Identities = 126/192 (65%), Positives = 151/192 (78%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S+AK + TF DVAGVDEA ++ E+ +FL+ P R+ +GA+IPKGVLL GPPG Sbjct: 147 KSRAKQLSKDMPKTTFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPG 206 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+N+PCI+FVDEIDA Sbjct: 207 TGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDA 266 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 V +DEREQTLNQLL EMDGF G+I++AATNR DILD ALLRPGRFDR Sbjct: 267 VGRQRGTGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDR 326 Query: 576 QVSVDVPDVRGR 611 Q+ V PD+ GR Sbjct: 327 QIPVSNPDLAGR 338
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 250 bits (639), Expect = 2e-66 Identities = 128/193 (66%), Positives = 154/193 (79%), Gaps = 1/193 (0%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S+AK Q + V F DVAG +E KQ+ +EVV+FLK P+++ +GARIP GVLL GPPG Sbjct: 177 KSRAKQQDGKTSKVRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLEGPPG 236 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTLLAKA+AGEAGVPF+SISGS+FVEMFVGVGASRVRDLF+ AK+ AP I+F+DEIDA Sbjct: 237 TGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDA 296 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFD 572 V NDEREQTLNQLL EMDGF+ + +IV+AATNR+D+LD ALLRPGRFD Sbjct: 297 VGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFD 356 Query: 573 RQVSVDVPDVRGR 611 R+V V PDV+GR Sbjct: 357 RKVLVGAPDVKGR 369
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 248 bits (632), Expect = 1e-65 Identities = 125/193 (64%), Positives = 151/193 (78%), Gaps = 1/193 (0%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 +S+AK +E VTF DVAG++E K++ E++E+LK P +F +G R PKGVLL G PG Sbjct: 139 KSRAKVYIEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPG 198 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 GKTLLAKAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEIDA Sbjct: 199 VGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDA 258 Query: 396 VXXXXXXX-XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 572 V +DEREQTLNQLL EMDGF+ + GIIV+AATNR DILD ALLRPGRFD Sbjct: 259 VGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFD 318 Query: 573 RQVSVDVPDVRGR 611 RQ+ + PDVRGR Sbjct: 319 RQIFIPKPDVRGR 331
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 243 bits (619), Expect = 4e-64 Identities = 122/194 (62%), Positives = 148/194 (76%), Gaps = 2/194 (1%) Frame = +3 Query: 36 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 212 +SKAK F E + + F DVAG DEAK++ ME V FLK+P R+ +GA+IP+G +L GPP Sbjct: 331 RSKAKKFNTETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPP 390 Query: 213 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 392 GTGKTLLAKA AGEAGVPF+ +SGSEFVEMFVGVGA+RVRDLFK A+ENAP IVF+DEID Sbjct: 391 GTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEID 450 Query: 393 AV-XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRF 569 A+ NDERE TLNQ+L EMDGF ++V+A TNR DILD ALLRPGRF Sbjct: 451 AIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRF 510 Query: 570 DRQVSVDVPDVRGR 611 DR +++D P++ GR Sbjct: 511 DRHINIDKPELEGR 524
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 239 bits (609), Expect = 6e-63 Identities = 121/181 (66%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V F+D+AG +EAK++ +E+V+FLK P+R+ ++GA+IPKGVLLVGPPGTGKTLLAKA+AGE Sbjct: 173 VRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGE 232 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXX 431 A VPFFS+ GS F+EMFVG+GASRVRDLF AK+ AP I+F+DEIDA+ Sbjct: 233 ASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISG 292 Query: 432 NDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 NDEREQTLNQLL EMDGF N +IV+AATNR +ILD ALLRPGRFDRQV VD PD +G Sbjct: 293 NDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKG 352 Query: 609 R 611 R Sbjct: 353 R 353
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 238 bits (608), Expect = 8e-63 Identities = 123/186 (66%), Positives = 148/186 (79%), Gaps = 2/186 (1%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 +PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLVGPPGTGKTLLAK Sbjct: 164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXX 416 A+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+ Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAG 281 Query: 417 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+RPGRFDRQV VD Sbjct: 282 GVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDK 341 Query: 594 PDVRGR 611 PD GR Sbjct: 342 PDFNGR 347
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 238 bits (608), Expect = 8e-63 Identities = 123/186 (66%), Positives = 148/186 (79%), Gaps = 2/186 (1%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 +PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLVGPPGTGKTLLAK Sbjct: 164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXX 416 A+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+ Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAG 281 Query: 417 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+RPGRFDRQV VD Sbjct: 282 GMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDK 341 Query: 594 PDVRGR 611 PD GR Sbjct: 342 PDFNGR 347
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 236 bits (603), Expect = 3e-62 Identities = 119/195 (61%), Positives = 147/195 (75%), Gaps = 3/195 (1%) Frame = +3 Query: 36 QSKAK-FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPP 212 +S+AK F E + ++F +VAG DEAKQ+ ME V FLK P ++T +GA+IP+G +L GPP Sbjct: 271 KSRAKLFNKETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPP 330 Query: 213 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 392 GTGKTLLAKA AGEA VPF S+SGSEFVEMFVGVGASRVRDLF +A+ AP I+F+DEID Sbjct: 331 GTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEID 390 Query: 393 AV--XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGR 566 A+ NDERE TLNQLL EMDGF + ++V+A TNR D+LD+AL+RPGR Sbjct: 391 AIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGR 450 Query: 567 FDRQVSVDVPDVRGR 611 FDR + +D PDV GR Sbjct: 451 FDRHIQIDSPDVNGR 465
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 230 bits (587), Expect = 2e-60 Identities = 111/179 (62%), Positives = 136/179 (75%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPGTGKTLLAKA AGE Sbjct: 305 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 364 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 A VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPCI+F+DEIDAV Sbjct: 365 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 424 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E+E TLNQLL EMDGF T ++++A TNR DILD ALLRPGRFDRQ+ + PD++GR Sbjct: 425 SEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGR 483
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 230 bits (587), Expect = 2e-60 Identities = 111/179 (62%), Positives = 136/179 (75%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPGTGKTLLAKA AGE Sbjct: 304 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 363 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 A VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPCI+F+DEIDAV Sbjct: 364 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 423 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E+E TLNQLL EMDGF T ++++A TNR DILD ALLRPGRFDRQ+ + PD++GR Sbjct: 424 SEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGR 482
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 229 bits (584), Expect = 5e-60 Identities = 110/179 (61%), Positives = 142/179 (79%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 395 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+GR Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 229 bits (583), Expect = 6e-60 Identities = 110/179 (61%), Positives = 142/179 (79%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 453 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+GR Sbjct: 454 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 512
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 227 bits (578), Expect = 2e-59 Identities = 107/185 (57%), Positives = 139/185 (75%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 236 ++ N V F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPGTGKTLLA Sbjct: 165 LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLA 224 Query: 237 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 416 KA AGEA VPF +++GSEF+EMFVGVG +RVRD+F A+++APCI+F+DEIDA+ Sbjct: 225 KATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGR 284 Query: 417 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 E+E TLNQ+L EMDGF +T ++V+A TNR DILD AL RPGRFDRQ+ + P Sbjct: 285 GHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPP 344 Query: 597 DVRGR 611 D++GR Sbjct: 345 DIKGR 349
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 226 bits (577), Expect = 3e-59 Identities = 106/181 (58%), Positives = 137/181 (75%) Frame = +3 Query: 69 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 248 + V FD++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPPGTGKTLLAKA+A Sbjct: 223 SSVRFDNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVA 282 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 GEAGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID+V Sbjct: 283 GEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELS 342 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 EQTLNQLL EMDGF TG++V+AATNR D+LD ALLRPGRFDR + +++PD++ Sbjct: 343 SYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKE 402 Query: 609 R 611 R Sbjct: 403 R 403
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 225 bits (574), Expect = 7e-59 Identities = 109/179 (60%), Positives = 141/179 (78%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIEFPMH 395 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 QT+ QLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+GR Sbjct: 396 PYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 223 bits (569), Expect = 3e-58 Identities = 105/179 (58%), Positives = 135/179 (75%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V F ++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPPGTGKTLLAKA+AGE Sbjct: 228 VKFTNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGE 287 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 AGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID+V Sbjct: 288 AGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSY 347 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 EQTLNQLL EMDGF TG++V+AATNR D+LD ALLRPGRFDR + +++PD++ R Sbjct: 348 SVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKER 406
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 221 bits (562), Expect = 2e-57 Identities = 105/181 (58%), Positives = 136/181 (75%) Frame = +3 Query: 69 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 248 T F D+AG E ++ E+V++LK P+++ A GAR PKG+LL GPPGTGKTLLAKA A Sbjct: 207 TDKKFTDIAGNKEPIEEVQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATA 266 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 GEA VPFF IS S FVE++VG+GA RVR++FK+A++ AP I+F+DE+DAV Sbjct: 267 GEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGG 326 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 NDEREQTLNQ+L EMDG N GI+++ ATNR D+LD ALLRPGRFDR ++V +PD++ Sbjct: 327 GNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKE 386 Query: 609 R 611 R Sbjct: 387 R 387
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 215 bits (548), Expect = 7e-56 Identities = 106/182 (58%), Positives = 134/182 (73%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 245 NT V+F DV G DE K++ ++VVEFL+ PE+F +GA++PKGVLLVGPPG GKTLLAKA+ Sbjct: 160 NTDVSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAV 219 Query: 246 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 425 +GEA VPF SGS F E+ VG+GASR+R LF AK+N+PC+VF+DEID+V Sbjct: 220 SGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSV--GGNRTFS 277 Query: 426 XXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + QT+NQLL EMDGF+ GIIV+ ATN+A++LD ALLRPGRFD Q+ V P Sbjct: 278 PHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYE 337 Query: 606 GR 611 GR Sbjct: 338 GR 339
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 213 bits (542), Expect = 4e-55 Identities = 104/181 (57%), Positives = 134/181 (74%) Frame = +3 Query: 69 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 248 T V FDDV G DEA+ + E+V+FLK P ++ ++G ++PKGVLL GPPGTGKTLLA+A A Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 GEAGV FF +SGSEF E++VGVGA R+RDLF +A+ AP I+F+DE+DA+ Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQA 395 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 +QTLNQLL E+DGF +GII++ ATN + LD AL RPGRFD+ V+VD+PDVRG Sbjct: 396 Y---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRG 452 Query: 609 R 611 R Sbjct: 453 R 453
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 211 bits (536), Expect = 2e-54 Identities = 106/181 (58%), Positives = 134/181 (74%), Gaps = 1/181 (0%) Frame = +3 Query: 72 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXX 428 EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 N E EQTLNQLL EMDG +IV+A+TNRADILD AL+RPGR DR V +D+P ++ Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484 Query: 609 R 611 R Sbjct: 485 R 485
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 210 bits (534), Expect = 3e-54 Identities = 107/171 (62%), Positives = 130/171 (76%) Frame = +3 Query: 99 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 278 +DEAK + E+V++LK PE+++ +G R+PKGVLLVGPPGTGKTLLA+AIAGEA VPFF Sbjct: 206 MDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHT 265 Query: 279 SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLN 458 +GSEF E+ VG GA RVRDLF KAK APCI+F+DEID+V + QT+N Sbjct: 266 AGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTIN 323 Query: 459 QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 QLL+EMDGF N GIIV+AATNR D LD ALLRPGRFD +V+V PD+ GR Sbjct: 324 QLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGR 374
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 191 bits (486), Expect = 1e-48 Identities = 97/187 (51%), Positives = 125/187 (66%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 ++E ++F+D+ G++ +D EVVE LK PE F VG PKGVLL GPPGTGKTL Sbjct: 138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTL 197 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E F + GSE V+ F+G GA VRD+FK AKE +PCI+F+DEIDAV Sbjct: 198 LAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKR 257 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++TL QLL EMDGF+ + ++AATNR DILD A+LRPGRFDR + + Sbjct: 258 TESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIS 317 Query: 591 VPDVRGR 611 +PD GR Sbjct: 318 MPDEDGR 324
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 189 bits (480), Expect = 5e-48 Identities = 94/187 (50%), Positives = 124/187 (66%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +++ V ++D+ G+++ Q+ EVVE LK PE F VG PKG+LL GPPGTGKTL Sbjct: 160 EVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTL 219 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E F + GSE V+ F+G GAS V+D+FK AKE AP I+F+DEIDA+ Sbjct: 220 LAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKR 279 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++TL QLL EMDGF+ + ++ ATNR DILD A+LRPGRFDR + V Sbjct: 280 TDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVP 339 Query: 591 VPDVRGR 611 PD +GR Sbjct: 340 APDEKGR 346
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 187 bits (476), Expect = 2e-47 Identities = 96/187 (51%), Positives = 126/187 (67%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +++ + V++DD+ G+DE ++ EVVE LK+PE F VG PKGVLL GPPGTGKTL Sbjct: 169 EVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTL 228 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A A F ++ E V+ F+G GA VR+LF+ A+E AP I+F+DEIDA+ Sbjct: 229 LAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARR 288 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++TL QLL EMDGF+ I V+AATNR DILD ALLRPGRFDR + + Sbjct: 289 MRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIP 348 Query: 591 VPDVRGR 611 +PD GR Sbjct: 349 LPDEEGR 355
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 181 bits (460), Expect = 1e-45 Identities = 94/187 (50%), Positives = 122/187 (65%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 ++E V+++ + G++E ++ E VE LKKPE F +G PKGVLL GPPGTGKTL Sbjct: 141 EVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTL 200 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E F I SEFV ++G GA VR +F+ AKE +P I+F+DEIDAV Sbjct: 201 LAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKR 260 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++TL QLL E+DGFE + +VAATNR DILD ALLRPGRFDR + V Sbjct: 261 LKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVP 320 Query: 591 VPDVRGR 611 +P+ GR Sbjct: 321 LPNEDGR 327
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 181 bits (458), Expect = 2e-45 Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+ ++ G++E ++ EVVE LK PE F +G PKGVLL GPPGTGKT+LAKA+A Sbjct: 131 VTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVAT 190 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+ F + SEF + FVG GA VR+LF+ AK AP I+F+DEIDA+ Sbjct: 191 ESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSG 250 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++TL QLL E+DGF+ + ++AATNR DILD ALLRPGRFDR + V +PD +GR Sbjct: 251 EREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGR 310
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 181 bits (458), Expect = 2e-45 Identities = 90/188 (47%), Positives = 123/188 (65%), Gaps = 1/188 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F++E V+++D+ G+D ++ E VE L KPE F VG PKGVLL GPPGTGKT Sbjct: 130 FEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKT 189 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 LLAKA+A + F + GSEFV+ ++G GA VR++F+ AKE AP I+F+DE+DA+ Sbjct: 190 LLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAAR 249 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 + E ++T+ QLL E+DGF+ + V+ ATNR DILD A+LRPGRFDR + V Sbjct: 250 RTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEV 309 Query: 588 DVPDVRGR 611 +P GR Sbjct: 310 PLPTFEGR 317
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 180 bits (457), Expect = 3e-45 Identities = 93/188 (49%), Positives = 119/188 (63%), Gaps = 1/188 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F++ VT++D+ G+++ Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 127 FEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKT 186 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 L+AKA+A F + GSE V F+G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 187 LMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 246 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 247 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 306 Query: 588 DVPDVRGR 611 +PD +GR Sbjct: 307 PLPDYQGR 314
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 179 bits (455), Expect = 4e-45 Identities = 94/188 (50%), Positives = 118/188 (62%), Gaps = 1/188 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 126 FEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 185 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 L+AKAIA E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 186 LMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 245 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 246 RLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 305 Query: 588 DVPDVRGR 611 +PD GR Sbjct: 306 PLPDFEGR 313
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 178 bits (452), Expect = 1e-44 Identities = 93/188 (49%), Positives = 118/188 (62%), Gaps = 1/188 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 129 FEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 188 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 L+AKA+A E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 189 LMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 248 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 249 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 308 Query: 588 DVPDVRGR 611 +PD GR Sbjct: 309 PLPDFEGR 316
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 178 bits (452), Expect = 1e-44 Identities = 93/188 (49%), Positives = 118/188 (62%), Gaps = 1/188 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F++ VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKT Sbjct: 129 FEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKT 188 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 L+AKA+A E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 189 LMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAK 248 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V Sbjct: 249 RMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEV 308 Query: 588 DVPDVRGR 611 +PD GR Sbjct: 309 PLPDFEGR 316
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 177 bits (448), Expect = 3e-44 Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++D+ G++E KQ+ E VE+ LK E F +G R PKGVLL GPPGTGKTLLAKA+A Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+G F S+ G E +VG +R++F+KA+++APCI+F DEIDA+ Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSA 568 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQLLTE+DG E ++V+AATNR DI+D ALLRPGR DR + V VPD + R Sbjct: 569 --VTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKAR 626 Score = 166 bits (419), Expect = 6e-41 Identities = 84/180 (46%), Positives = 118/180 (65%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+ E + E++E ++ PE F +G PKGVLLVGPPGTGKTLLAKA+A Sbjct: 176 VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 EAG F+ I+G E + +VG +R +F++A+ENAP I+F+DEIDA+ Sbjct: 236 EAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAI---APKRDEAT 292 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + + QLLT MDG +G ++V+ ATNR + LD AL RPGRFDR++ + VPD GR Sbjct: 293 GEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGR 352
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 175 bits (444), Expect = 8e-44 Identities = 91/188 (48%), Positives = 120/188 (63%), Gaps = 1/188 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F++ V + D+ G++E + EV+E LK PE F +G PKGVLL GPPGTGKT Sbjct: 123 FEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKT 182 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 LLAKA+A E+ F + SEF + FVG GA VR++F+ A+ AP IVF+DEIDA+ Sbjct: 183 LLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAK 242 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 E ++TL QLL E+DGF+ + ++AATNR DILD ALLRPGRFDR + V Sbjct: 243 RVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEV 302 Query: 588 DVPDVRGR 611 +P+ GR Sbjct: 303 PLPNFEGR 310
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 173 bits (439), Expect = 3e-43 Identities = 86/187 (45%), Positives = 123/187 (65%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +++ + V ++D+ G+D+ ++ E VE +K P F VG P GVLL GPPGTGKTL Sbjct: 139 EVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTL 198 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 +AKA+A + F ++GSE V F+G GA VRDLF+ A+++ P +VF+DEIDA+ Sbjct: 199 MAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKR 258 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++T+ QLL+EMDGF+ I ++AATNR D+LD A+LRPGRFDR + V Sbjct: 259 TDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVP 318 Query: 591 VPDVRGR 611 P+V GR Sbjct: 319 HPNVGGR 325
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 173 bits (439), Expect = 3e-43 Identities = 88/187 (47%), Positives = 123/187 (65%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +++ + VT+ D+ G+D+ ++ E VE L PE+F AVG P GVLL GPPGTGKT+ Sbjct: 142 EVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTM 201 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A + F ++GSE V F+G G+ VRDLF+ A++ P I+F+DEIDAV Sbjct: 202 LAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKR 261 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++T+ QLL+EMDGF+ I ++AATNR D+LDSA+LRPGRFDR + V Sbjct: 262 TDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVP 321 Query: 591 VPDVRGR 611 P+ R Sbjct: 322 NPNPDAR 328
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 173 bits (438), Expect = 4e-43 Identities = 89/187 (47%), Positives = 121/187 (64%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 ++E V F DV G++E ++ E V +K P F +G PKGVLL GPPGTGKTL Sbjct: 129 EVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTL 188 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+AGE F + GSE V F+G GA VR++F+ A+E AP I+F+DEIDA+ Sbjct: 189 LAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKR 248 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 + E ++T+ QLL E+DGF+ + V+AATNR D++D A+LRPGRFDR + V Sbjct: 249 VDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVP 308 Query: 591 VPDVRGR 611 +P +RGR Sbjct: 309 LPSLRGR 315
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 172 bits (437), Expect = 5e-43 Identities = 86/190 (45%), Positives = 120/190 (63%), Gaps = 1/190 (0%) Frame = +3 Query: 45 AKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTG 221 A ++ + V +D + G+DE Q+ E VE L PERF +G PKGVLL G PGTG Sbjct: 146 AAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTG 205 Query: 222 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX 401 KTLLAKA+A F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 206 KTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIA 265 Query: 402 XXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQV 581 + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LRPGRFDR V Sbjct: 266 ARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLV 325 Query: 582 SVDVPDVRGR 611 V +P + R Sbjct: 326 HVPMPGIEAR 335
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 172 bits (435), Expect = 9e-43 Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +D + G+DE Q+ E VE L +PERF +G PKGVLL G PGTGKTLLAKA+A Sbjct: 156 VDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH 215 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 216 RTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGA 275 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LRPGRFDR V V +P + R Sbjct: 276 DREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEAR 335
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 170 bits (430), Expect = 3e-42 Identities = 83/180 (46%), Positives = 121/180 (67%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ ++EAKQ E+VE+ ++ PE F +G PKG+LL GPPGTGKTLLA+A+A Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G F +++G E + F G R+R++FK+A+ENAP I+F+DEIDA+ Sbjct: 269 EIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAI---APKREDVT 325 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + ++ + QLLT MDG +G +IV+ ATNR D +D AL RPGRFDR++ + PD +GR Sbjct: 326 GEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGR 385 Score = 163 bits (413), Expect = 3e-40 Identities = 84/180 (46%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++D+ G+D KQ E VE+ L+ PE FT G PKG+LL GPPGTGKT+LAKA+A Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+G F ++ G E + +VG +R++F+KA++ AP ++F DEID++ Sbjct: 544 ESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG 603 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ER +NQLL EMDG ++++AATNR DILD ALLRPGRFDR + V PD R Sbjct: 604 VTER--IVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTAR 661
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 168 bits (426), Expect = 1e-41 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 168 bits (426), Expect = 1e-41 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 168 bits (426), Expect = 1e-41 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 168 bits (426), Expect = 1e-41 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 168 bits (426), Expect = 1e-41 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 168 bits (425), Expect = 1e-41 Identities = 84/178 (47%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 276 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 277 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 334
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 167 bits (423), Expect = 2e-41 Identities = 83/178 (46%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 271 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 272 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 329
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 167 bits (422), Expect = 3e-41 Identities = 83/180 (46%), Positives = 119/180 (66%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++D+ G++ AKQ+ ME VE+ LK PE F A + P+G+LL GPPGTGKTLLAKA+A Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+ F S+ G E + +VG VR++F+KA++ APC++F DEID++ Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSH 571 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ER ++QLLTE+DG E ++V+AATNR D++D ALLRPGR +R + + PD + R Sbjct: 572 VTER--VVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKAR 629 Score = 162 bits (410), Expect = 7e-40 Identities = 83/180 (46%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+ + E++E LK PE F +G PKGVLL GPPGTGKTL+AKA+A Sbjct: 179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 238 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F ISG E + + G R+R++F++AKENAP I+F+DEID++ Sbjct: 239 EVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSI---APKREEVT 295 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + + QLL MDG E +IV+AATNR D +D AL RPGRFDR++ + VPD GR Sbjct: 296 GEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGR 355
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 166 bits (419), Expect = 6e-41 Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P+ R Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEAR 324
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 166 bits (419), Expect = 6e-41 Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 202 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 203 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 262 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P+ R Sbjct: 263 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEAR 321
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 166 bits (419), Expect = 6e-41 Identities = 84/180 (46%), Positives = 115/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 +TFD + G+ E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLAKA+A Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 G F S V+ ++G A +R++F AKE+ PCI+F+DE+DA+ Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++TL +LLT+MDGF+ ++ ATNR D LD ALLRPGR DR+V + +P+ GR Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 165 bits (417), Expect = 1e-40 Identities = 84/180 (46%), Positives = 117/180 (65%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 +T+DDV G+ EAK + E VE+ L +PE+FT +G P GVLL GPPGTGKTL+AKA+A Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F S+ G + + +VG +R F+KA++ AP ++F DE+D++ Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSL--APGRGQTGG 576 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 N+ E+ +NQLLTE+DG E ++V+AATNR DI+D AL+R GRFDR V V P + GR Sbjct: 577 NNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGR 636 Score = 164 bits (415), Expect = 2e-40 Identities = 81/181 (44%), Positives = 118/181 (65%), Gaps = 1/181 (0%) Frame = +3 Query: 72 GVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 248 G+T++D+ G++ Q E+VE +K P+ F +G P+GVLL GPPGTGKTLLAKA+A Sbjct: 185 GITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVA 244 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 E FFSI+G E + + G ++R++F+ AK+++P I+F+DE+D++ Sbjct: 245 NETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSI---APKREDV 301 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 + + + QLLT MDG EG +IV+AATNR D +D AL RPGRFDR++ + VPD G Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIG 361 Query: 609 R 611 R Sbjct: 362 R 362
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 164 bits (416), Expect = 1e-40 Identities = 85/179 (47%), Positives = 118/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGSGGD 260 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 319
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 164 bits (416), Expect = 1e-40 Identities = 83/190 (43%), Positives = 116/190 (61%), Gaps = 1/190 (0%) Frame = +3 Query: 39 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPG 215 S + Q + V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG Sbjct: 147 SISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPG 206 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 GKT+LA A+A F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA Sbjct: 207 CGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDA 266 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 + + E ++ L +LL +MDGF+ T + V+ ATNRAD LD ALLRPGR DR Sbjct: 267 IATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 326 Query: 576 QVSVDVPDVR 605 ++ +PD R Sbjct: 327 KIEFPLPDRR 336
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 164 bits (415), Expect = 2e-40 Identities = 85/192 (44%), Positives = 117/192 (60%), Gaps = 1/192 (0%) Frame = +3 Query: 39 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPG 215 S Q+E VT+ DV G E + EVVE L PERF +G PKG++L GPPG Sbjct: 164 SVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPG 223 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 TGKTL A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDA Sbjct: 224 TGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDA 283 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 + ++E ++T+ +L+T++DGF+ I V+ ATNR + LD AL+RPGR DR Sbjct: 284 IGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDR 343 Query: 576 QVSVDVPDVRGR 611 +V +PD+ GR Sbjct: 344 KVEFGLPDLEGR 355
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 164 bits (414), Expect = 2e-40 Identities = 85/186 (45%), Positives = 115/186 (61%), Gaps = 1/186 (0%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 +E VT+ DV G + + EVVE L PERF +G PKG+LL GPPGTGKTL Sbjct: 200 VEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDAV Sbjct: 260 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARF 319 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 ++E ++T+ +L+T++DGF+ I V+ ATNR + LD ALLRPGR DR+V + Sbjct: 320 DDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL 379 Query: 594 PDVRGR 611 PD+ GR Sbjct: 380 PDLEGR 385
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 164 bits (414), Expect = 2e-40 Identities = 80/183 (43%), Positives = 112/183 (61%), Gaps = 1/183 (0%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 242 + VT+DDV G+DE K++ E VE+ + P+++T G KGVL GPPGTGKTLLAKA Sbjct: 481 SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA 540 Query: 243 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 422 +A E F S+ G E + M+ G S +RD+F KA+ AP +VF+DE+D++ Sbjct: 541 VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSL 600 Query: 423 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 602 ++ +NQLLTEMDG + V+ ATNR D +D A+LRPGR D+ + V +PD Sbjct: 601 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDE 660 Query: 603 RGR 611 R Sbjct: 661 NAR 663 Score = 153 bits (386), Expect = 4e-37 Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DD+ G + E+VE L+ P+ F A+G + P+GVL+ GPPGTGKTL+A+A+A Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSI---APKRDKTN 327 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + ++QLLT MDG + + ++V+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 328 GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 387
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 164 bits (414), Expect = 2e-40 Identities = 83/180 (46%), Positives = 118/180 (65%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F ++GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++ L +LL +MDGFE ++ + V+ ATNRAD LD ALLRPGR DR+ ++ P +R R Sbjct: 283 DREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRK--IEFPSLRDR 340
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 164 bits (414), Expect = 2e-40 Identities = 83/180 (46%), Positives = 118/180 (65%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F ++GSEFV ++G G VRD+F+ A+ENAP I+F+DE+D++ Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++ L +LLT+MDGF+ +T + V+ ATNRAD LD ALLRPGR DR+ ++ P +R R Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRK--IEFPYLRDR 346
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 163 bits (413), Expect = 3e-40 Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 165 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 224 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 225 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 284 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 344 Query: 591 VPDVRGR 611 +PD+ GR Sbjct: 345 LPDLEGR 351
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 163 bits (413), Expect = 3e-40 Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343 Query: 591 VPDVRGR 611 +PD+ GR Sbjct: 344 LPDLEGR 350
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 163 bits (413), Expect = 3e-40 Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343 Query: 591 VPDVRGR 611 +PD+ GR Sbjct: 344 LPDLEGR 350
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 163 bits (413), Expect = 3e-40 Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 Q+E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 164 QVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTL 223 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 224 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGAR 283 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ Sbjct: 284 FDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFS 343 Query: 591 VPDVRGR 611 +PD+ GR Sbjct: 344 LPDLEGR 350
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 163 bits (412), Expect = 4e-40 Identities = 80/178 (44%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 ++D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F+ AKE APCI+F+DEIDA+ + Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 290 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 347
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 163 bits (412), Expect = 4e-40 Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 163 bits (412), Expect = 4e-40 Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 163 bits (412), Expect = 4e-40 Identities = 83/178 (46%), Positives = 113/178 (63%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 339
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 163 bits (412), Expect = 4e-40 Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 +++ D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA+ Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ +T + V+ ATNR D LD ALLRPGR DR++ +PD R Sbjct: 278 DREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 335
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 162 bits (411), Expect = 5e-40 Identities = 80/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVAN 190 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F ++GSEFV+ ++G G VRD+F+ A+E AP IVF+DE+D++ Sbjct: 191 HTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSA 250 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++ L +LL +MDGF+ + V+ ATNRAD +D ALLRPGR DR++ +PD R Sbjct: 251 DREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRR 308
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 162 bits (410), Expect = 7e-40 Identities = 83/180 (46%), Positives = 115/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V++ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 F + GSEFV+ ++G G VRD+F+ A+ENAP I+F+DEIDA+ Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++ L +LLT+MDGF+ + V+ ATNRAD LD ALLRPGR DR+ ++ P R R Sbjct: 251 DREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRK--IEFPSYRDR 308
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 162 bits (409), Expect = 9e-40 Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 3/182 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 ++F V G++E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 GV F + S V+ ++G A +R++F AKE+ PC++F+DEIDA+ Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248 Query: 432 NDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + E ++TL +LL +MDGF+ G T II+ ATNR D LD ALLRPGR DR++ + +P+ Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIM--ATNRPDTLDPALLRPGRLDRKIEIPLPNEV 306 Query: 606 GR 611 GR Sbjct: 307 GR 308
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 161 bits (408), Expect = 1e-39 Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 1/186 (0%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 594 PDVRGR 611 PD+ GR Sbjct: 339 PDLEGR 344
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 161 bits (408), Expect = 1e-39 Identities = 83/186 (44%), Positives = 115/186 (61%), Gaps = 1/186 (0%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 594 PDVRGR 611 PD+ GR Sbjct: 339 PDLEGR 344
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 161 bits (408), Expect = 1e-39 Identities = 76/180 (42%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD R Sbjct: 597 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSR 656 Score = 150 bits (379), Expect = 3e-36 Identities = 80/181 (44%), Positives = 115/181 (63%), Gaps = 2/181 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 432 NDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD G Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379 Query: 609 R 611 R Sbjct: 380 R 380
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 161 bits (407), Expect = 2e-39 Identities = 80/179 (44%), Positives = 117/179 (65%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+D V G+ + ++ EV+E +K PE F ++G PKGV+L GPPGTGKTLLA+A+A Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SG+E V+ ++G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGFE + I ++ ATNR DILD ALLRPGR DR++ P V R Sbjct: 266 SEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAAR 324
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 161 bits (407), Expect = 2e-39 Identities = 79/178 (44%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 169 YHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEAR 346
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 160 bits (406), Expect = 2e-39 Identities = 84/180 (46%), Positives = 116/180 (64%), Gaps = 2/180 (1%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+D V G+D+ ++ EV+E +K PE F ++G PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 188 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 189 TDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGG 248 Query: 435 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 D E ++T+ +LL ++DGFE I V+ TNR DILD ALLRPGR DR++ P GR Sbjct: 249 DSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGR 308
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 160 bits (406), Expect = 2e-39 Identities = 78/178 (43%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 ++D+ G+++ Q+ +E + + +RF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 175 YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 234 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 235 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 294 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 295 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEAR 352
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 160 bits (405), Expect = 3e-39 Identities = 78/178 (43%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 247 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 248 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 307 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 308 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 365
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 160 bits (405), Expect = 3e-39 Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F SI G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD R Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 657 Score = 150 bits (378), Expect = 4e-36 Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 160 bits (405), Expect = 3e-39 Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 1/187 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 Q+E VT+ DV G + + EVVE L PER+ +G PKGVLL GPPGTGKTL Sbjct: 167 QVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTL 226 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDAV Sbjct: 227 CARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGAR 286 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR+V Sbjct: 287 FDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFA 346 Query: 591 VPDVRGR 611 +PD+ GR Sbjct: 347 LPDLAGR 353
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 160 bits (405), Expect = 3e-39 Identities = 78/178 (43%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 160 bits (405), Expect = 3e-39 Identities = 78/178 (43%), Positives = 115/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 160 bits (405), Expect = 3e-39 Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 2/188 (1%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 ++E T++ V G+DE ++ EV+E +K PE F ++G PKGV++ GPPGTGKTL Sbjct: 146 KVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LA+A+A F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 206 LARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTR 265 Query: 411 XXXXXXXND-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 D E ++T+ +LL ++DGFE I ++ ATNR DILD ALLRPGR DR++ Sbjct: 266 TEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEF 325 Query: 588 DVPDVRGR 611 P+ R Sbjct: 326 PNPNELAR 333
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 160 bits (404), Expect = 4e-39 Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 2/180 (1%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T++ V G+++ ++ EV+E +K PE F ++G PKG+LL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262 Query: 435 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 D E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P R Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEAR 322
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 160 bits (404), Expect = 4e-39 Identities = 80/180 (44%), Positives = 117/180 (65%), Gaps = 3/180 (1%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 ++D+ G+++ Q+ +E + + E+F +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 165 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 224 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F AKE +PCI+F+DEIDA+ + Sbjct: 225 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 284 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP--DVRGR 611 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P + RGR Sbjct: 285 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGR 344
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 160 bits (404), Expect = 4e-39 Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDA 597 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD R Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR 657 Score = 150 bits (378), Expect = 4e-36 Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 159 bits (403), Expect = 5e-39 Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA 597 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD R Sbjct: 598 GGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR 657 Score = 150 bits (380), Expect = 2e-36 Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 159 bits (403), Expect = 5e-39 Identities = 84/180 (46%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DD+ G+++ K++ E VE L KP+ F +G R KG LL GPPG GKTLLAKA+A Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+ F SI G E + +VG +R++FKKAK+ AP IVF+DEID++ Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG 583 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ER +NQLLT +DG E G++V+ ATNR DI+D ALLR GRFD+ + + PD R Sbjct: 584 VTER--IVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEAR 641 Score = 158 bits (400), Expect = 1e-38 Identities = 79/186 (42%), Positives = 117/186 (62%), Gaps = 1/186 (0%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 +E + ++++D+ G+ E E++E LK PE F +G PKGV+L GPPGTGKTL+ Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLI 240 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 A+A+A E+G F SI+G E + + G ++R++F KA+E AP I+F+DEID++ Sbjct: 241 ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSI---AP 297 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 + + + QLLT MDG + +IV+ ATNR D +D AL RPGRFDR++ + V Sbjct: 298 KREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGV 357 Query: 594 PDVRGR 611 PD GR Sbjct: 358 PDRNGR 363
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 159 bits (402), Expect = 6e-39 Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 1/186 (0%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 158 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 217 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 218 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 277 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 278 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 337 Query: 594 PDVRGR 611 PD+ R Sbjct: 338 PDLESR 343
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 159 bits (402), Expect = 6e-39 Identities = 82/186 (44%), Positives = 114/186 (61%), Gaps = 1/186 (0%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 594 PDVRGR 611 PD+ R Sbjct: 339 PDLESR 344
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 159 bits (401), Expect = 8e-39 Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ DV G+D+ Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A + Sbjct: 186 TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQ 245 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F I GSE ++ ++G G VR+LF+ A+ENAP IVF+DEIDAV Sbjct: 246 TSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGE 305 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPD 360
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 158 bits (400), Expect = 1e-38 Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Score = 150 bits (380), Expect = 2e-36 Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 579 VSVDVPDVRGR 611 V + +PD GR Sbjct: 366 VDIGIPDATGR 376
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 158 bits (400), Expect = 1e-38 Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Score = 151 bits (381), Expect = 2e-36 Identities = 80/191 (41%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E V +DDV G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 579 VSVDVPDVRGR 611 V + +PD GR Sbjct: 366 VDIGIPDATGR 376
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 158 bits (400), Expect = 1e-38 Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Score = 150 bits (380), Expect = 2e-36 Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 579 VSVDVPDVRGR 611 V + +PD GR Sbjct: 366 VDIGIPDATGR 376
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 158 bits (399), Expect = 1e-38 Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 169 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 228 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 229 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 288 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF+ N + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 289 EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 346
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 158 bits (399), Expect = 1e-38 Identities = 79/177 (44%), Positives = 111/177 (62%), Gaps = 1/177 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 ++ D+ G D KQ+ E VE L + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 148 SYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ + Sbjct: 208 TSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGAD 267 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 E ++ L +LL +MDGF+ + + V+ ATNR D LD ALLRPGR DR++ +PD R Sbjct: 268 REVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 158 bits (399), Expect = 1e-38 Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 209 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 210 KATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDR 269 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF+ T + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 270 EVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 327
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 157 bits (398), Expect = 2e-38 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 157 bits (398), Expect = 2e-38 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 157 bits (398), Expect = 2e-38 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) Length = 805 Score = 157 bits (398), Expect = 2e-38 Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 594 GGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653 Score = 150 bits (378), Expect = 4e-36 Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 190 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 249 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 250 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 309 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 310 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 366 Query: 579 VSVDVPDVRGR 611 V + +PD GR Sbjct: 367 VDIGIPDSTGR 377
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 157 bits (398), Expect = 2e-38 Identities = 78/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDAV Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 301 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 302 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S| Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 157 bits (397), Expect = 2e-38 Identities = 72/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G+++ K++ ++V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Score = 150 bits (380), Expect = 2e-36 Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 1/191 (0%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGT Sbjct: 189 KREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGT 248 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 249 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI 308 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+ Sbjct: 309 ---APKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDRE 365 Query: 579 VSVDVPDVRGR 611 V + +PD GR Sbjct: 366 VDIGIPDATGR 376
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 156 bits (394), Expect = 5e-38 Identities = 76/175 (43%), Positives = 111/175 (63%), Gaps = 1/175 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR+LF+ A+E+ P IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 155 bits (393), Expect = 7e-38 Identities = 75/184 (40%), Positives = 112/184 (60%), Gaps = 1/184 (0%) Frame = +3 Query: 63 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 477 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 534 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 535 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGS 594 Query: 420 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 595 VGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 654 Query: 600 VRGR 611 R Sbjct: 655 EASR 658 Score = 149 bits (375), Expect = 8e-36 Identities = 77/191 (40%), Positives = 117/191 (61%), Gaps = 1/191 (0%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E V +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGT Sbjct: 195 KREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGT 254 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F + ++N+P I+F+DEIDA+ Sbjct: 255 GKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI 314 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + ++ ++QLLT MDG + ++V+AATNR + +D AL R GRFDR+ Sbjct: 315 ---APKREKAHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDRE 371 Query: 579 VSVDVPDVRGR 611 + + +PD GR Sbjct: 372 IDIGIPDAVGR 382
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 155 bits (393), Expect = 7e-38 Identities = 76/181 (41%), Positives = 113/181 (62%), Gaps = 2/181 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX-XXXXXXXX 428 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 656 Query: 609 R 611 R Sbjct: 657 R 657 Score = 150 bits (379), Expect = 3e-36 Identities = 80/181 (44%), Positives = 115/181 (63%), Gaps = 2/181 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 432 NDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD G Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379 Query: 609 R 611 R Sbjct: 380 R 380
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 155 bits (392), Expect = 9e-38 Identities = 74/179 (41%), Positives = 113/179 (63%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 T+ DV G+D+ ++ +E + +K+ ++F +G R PKG L+ GPPGTGKTLLA+A A + Sbjct: 179 TYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ 238 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F ++ + V+M++G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 239 TNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGD 298 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF + + V+AATNR D+LD ALLR GR DR++ +P R Sbjct: 299 REVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSR 357
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 155 bits (392), Expect = 9e-38 Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 1/189 (0%) Frame = +3 Query: 48 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGK 224 K E +++ DV G+ E ++ EVVE L PE F VG PKG LL GPPGTGK Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197 Query: 225 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX 404 TLLA+A+A + F + S V+ ++G A +R++F A+++ PCIVF+DEIDA+ Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257 Query: 405 XXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVS 584 + E ++TL +LL ++DGF+ + V+ ATNR D LD ALLRPGR DR++ Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317 Query: 585 VDVPDVRGR 611 + +P+ + R Sbjct: 318 IGLPNEQSR 326
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 155 bits (391), Expect = 1e-37 Identities = 78/183 (42%), Positives = 118/183 (64%), Gaps = 1/183 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F PN VT+ D+ +++ +++ M ++ ++ P++F A+G P GVLL GPPG GKT Sbjct: 572 FVTVPN--VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 629 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 LLAKA+A E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 689 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 + + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V Sbjct: 690 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 746 Query: 588 DVP 596 +P Sbjct: 747 GLP 749 Score = 136 bits (343), Expect = 4e-32 Identities = 80/200 (40%), Positives = 113/200 (56%), Gaps = 8/200 (4%) Frame = +3 Query: 36 QSKAK-----FQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLL 200 Q KAK FQ+ + V F+DV G D ++ +++ ++ PE + +G P+GVLL Sbjct: 247 QKKAKARGLEFQI---SNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLL 303 Query: 201 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 380 GPPG GKTLLA AIAGE +P ++ E V G ++R+LF++A NAPCI+F+ Sbjct: 304 HGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFI 363 Query: 381 DEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE---GNTGIIVVAATNRADILDSAL 551 DEIDA+ D + + QLLT MD ++V+ ATNR D LD AL Sbjct: 364 DEIDAI---TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPAL 420 Query: 552 LRPGRFDRQVSVDVPDVRGR 611 R GRFDR++ + +PD R Sbjct: 421 RRAGRFDREICLGIPDEASR 440
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 154 bits (390), Expect = 1e-37 Identities = 78/185 (42%), Positives = 117/185 (63%), Gaps = 1/185 (0%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 236 E N +T++D+ G+ + E++E LK PE F ++G PKGVL+ G PGTGKT +A Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578 Query: 237 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 416 KAIA E+ + I+G E + +G ++R +FKKA E PCI+F+DEID++ Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSI---ANK 635 Query: 417 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 N+ ++ ++QLLT MDG + N ++V+AATNR + +D AL R GRFDR++ + VP Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695 Query: 597 DVRGR 611 D +GR Sbjct: 696 DEQGR 700 Score = 154 bits (388), Expect = 3e-37 Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT++D+ G++E K+ E + + L+ + + KG+LL GPPG GKTLLAKAIA Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F S+ G E + M+ G + VRDLF KA+ +PCI+F DEID++ Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSL--AKERNSNTN 1048 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ND ++ +NQ+LTE+DG I ++AATNR DILD AL RPGR D+ + + +PD++ R Sbjct: 1049 NDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSR 1108
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 154 bits (390), Expect = 1e-37 Identities = 78/179 (43%), Positives = 111/179 (62%), Gaps = 1/179 (0%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 ++ D+ G+D Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A Sbjct: 191 SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANS 250 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR+LF+ A E +P IVF+DEIDAV Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGE 310 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF+ + V+ ATNR + LD ALLRPGR DR++ +PD++ R Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTR 369
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 154 bits (389), Expect = 2e-37 Identities = 78/180 (43%), Positives = 108/180 (60%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++D+ G++E K++ E V+ + E+F G KGVL GPPGTGKTLLAKAIA Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E F S+ G E + M+ G S VRD+F KA+ APC+VF+DE+D++ Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS 613 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++ +NQLLTEMDG + V+ ATNR D +D AL+RPGR D+ + V +PD R Sbjct: 614 GG-GDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEAR 672 Score = 149 bits (376), Expect = 6e-36 Identities = 74/180 (41%), Positives = 113/180 (62%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DD+ G E+VE L+ P+ F ++G + P+G+L+ GPPGTGKTL+A+A+A Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E G FF I+G E + G S +R F++A++N+P I+F+DEID++ Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSI---APKREKTN 337 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + + ++QLLT MDG + + ++V+AATNR + +D AL R GRFDR+V V +PD GR Sbjct: 338 GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGR 397
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 154 bits (389), Expect = 2e-37 Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 154 bits (389), Expect = 2e-37 Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 154 bits (389), Expect = 2e-37 Identities = 75/180 (41%), Positives = 114/180 (63%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 152 bits (383), Expect = 1e-36 Identities = 76/183 (41%), Positives = 116/183 (63%), Gaps = 1/183 (0%) Frame = +3 Query: 51 FQMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKT 227 F PN VT+ D+ +++ + + M ++ ++ P++F +G P G+LL GPPG GKT Sbjct: 571 FVTVPN--VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKT 628 Query: 228 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXX 407 LLAKA+A E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688 Query: 408 XXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 + + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFV 745 Query: 588 DVP 596 +P Sbjct: 746 GLP 748 Score = 137 bits (345), Expect = 2e-32 Identities = 78/195 (40%), Positives = 110/195 (56%), Gaps = 3/195 (1%) Frame = +3 Query: 36 QSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPG 215 ++KA+ + V F+DV G D ++ +++ ++ PE + +G P+GVLL GPPG Sbjct: 248 KAKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPG 307 Query: 216 TGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDA 395 GKTLLA AIAGE +P ++ E V G ++R+LF +A NAPCIVF+DEIDA Sbjct: 308 CGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDA 367 Query: 396 VXXXXXXXXXXXNDEREQTLNQLLTEMDGFE---GNTGIIVVAATNRADILDSALLRPGR 566 + D + + QLLT MD ++V+ ATNR D LD AL R GR Sbjct: 368 I---TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGR 424 Query: 567 FDRQVSVDVPDVRGR 611 FDR+V + +PD R Sbjct: 425 FDREVCLGIPDEAAR 439
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 151 bits (381), Expect = 2e-36 Identities = 80/192 (41%), Positives = 120/192 (62%), Gaps = 2/192 (1%) Frame = +3 Query: 42 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGT 218 K + + E + +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGT Sbjct: 196 KREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGT 255 Query: 219 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 GKTL+A+A+A E G FF I+G E + G S +R F++ ++N P I+F+DEIDA+ Sbjct: 256 GKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI 315 Query: 399 XXXXXXXXXXXNDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDR 575 N E E+ + +QLLT MDG +G + ++V+AATNR + +D AL R GRFDR Sbjct: 316 ----APKREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDR 371 Query: 576 QVSVDVPDVRGR 611 ++ + +PD GR Sbjct: 372 EIDIGIPDAVGR 383 Score = 150 bits (380), Expect = 2e-36 Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 2/185 (1%) Frame = +3 Query: 63 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 478 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 535 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXX 416 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 536 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGG 595 Query: 417 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +P Sbjct: 596 AGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 655 Query: 597 DVRGR 611 D R Sbjct: 656 DEASR 660
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 150 bits (380), Expect = 2e-36 Identities = 81/195 (41%), Positives = 121/195 (62%), Gaps = 8/195 (4%) Frame = +3 Query: 39 SKAKFQMEPNTG------VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVL 197 SKA+ + + G VT+DD+ G+D K + ++ ++ LK PE FT+ G + G+L Sbjct: 711 SKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGIL 769 Query: 198 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 377 GPPGTGKTL+AKAIA + FFS+ G E + M++G + VR +F+KA+E PC++F Sbjct: 770 FYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIF 829 Query: 378 VDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALL 554 DEID+V ++ ++QLL E+DG + G+ V+ ATNR D+LD ALL Sbjct: 830 FDEIDSV-APKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALL 888 Query: 555 RPGRFDRQVSVDVPD 599 RPGRFD+ + + +PD Sbjct: 889 RPGRFDKLLYLGIPD 903
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 149 bits (377), Expect = 5e-36 Identities = 75/184 (40%), Positives = 113/184 (61%), Gaps = 1/184 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +M+ + ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTL Sbjct: 172 KMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 231 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A + F I GSE ++ ++G G R +FK A ENAP IVF+DEIDA+ Sbjct: 232 LAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR 291 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 E ++T+ +LL ++DGF+ + V+ ATN+ + LD AL+RPGR DR++ + Sbjct: 292 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFE 351 Query: 591 VPDV 602 PD+ Sbjct: 352 NPDL 355
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 149 bits (376), Expect = 6e-36 Identities = 76/177 (42%), Positives = 113/177 (63%), Gaps = 2/177 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+DD+ G+D K + M+ ++ LK PE F++ G + G+L GPPGTGKTLLAKAIA Sbjct: 699 VTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIAS 757 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 758 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 816 Query: 432 NDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 817 GGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISD 873
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 147 bits (370), Expect = 3e-35 Identities = 77/180 (42%), Positives = 105/180 (58%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V + D+ G +E K E+++ L+ E F +G PKGVLL GPPG KTL AKA+A Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+G+ F ++ G E +VG +R++F+KA+ AP I+F DEIDA+ Sbjct: 573 ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA 632 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 L LL E+DG E G+++VAATNR D +D+ALLRPGR DR + V PDV R Sbjct: 633 ---ANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNAR 689 Score = 125 bits (315), Expect = 7e-29 Identities = 68/194 (35%), Positives = 112/194 (57%), Gaps = 2/194 (1%) Frame = +3 Query: 36 QSKAKFQM-EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGP 209 Q+ K+ + EP +++ V G+D+ + +E L +P F++ G P+G+LL GP Sbjct: 231 QANRKYNLPEP---LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGP 287 Query: 210 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 389 PGTGKT+L + +A + +I+G V ++G + +RD+F +A++ P I+F+DEI Sbjct: 288 PGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEI 347 Query: 390 DAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRF 569 D++ + R + LLT MDG ++V+AATNR + +D AL RPGRF Sbjct: 348 DSIAPNRANDDSGEVESR--VVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRF 405 Query: 570 DRQVSVDVPDVRGR 611 D++V + +PDV R Sbjct: 406 DQEVEIGIPDVDAR 419
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 147 bits (370), Expect = 3e-35 Identities = 69/178 (38%), Positives = 111/178 (62%), Gaps = 1/178 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + D+ G+ + ++ E + +++ ++F +G + PKG L+ GPPGTGKTLLA+A A ++ Sbjct: 184 YSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQS 243 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 F ++ + V+MF+G GA VRD F AKE +P I+F+DE+DA+ + Sbjct: 244 NATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDR 303 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++T+ +LL ++DGF + + V+AATNR D LD ALLR GR DR++ +P+ R Sbjct: 304 EVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEAR 361
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 146 bits (369), Expect = 4e-35 Identities = 76/179 (42%), Positives = 111/179 (62%), Gaps = 2/179 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+DDV G+ K ME ++ LK PE F + G + G+L GPPGTGKTLLAKAIA Sbjct: 715 VTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIAT 773 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 774 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSV-APKRGNQGDS 832 Query: 432 NDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 ++ ++QLL E+DG + G+ ++ ATNR D+LD ALLRPGRFD+ + + + D R Sbjct: 833 GGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTR 891
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 146 bits (369), Expect = 4e-35 Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 4/179 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++DV G+D K + ++ +E LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 810 VKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIAT 868 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 869 NFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 927 Query: 432 NDEREQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ ++QLL E+DG EG G+ VV ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 928 GGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIAD 986
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 146 bits (368), Expect = 5e-35 Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DD+ G+ +AK +E +E+ K F++ R+ G+LL G PG GKTLLA A+A Sbjct: 796 VRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAA 855 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + G+ F SI G E + ++G VR+LF++A+ PCI+F DE D++ Sbjct: 856 QCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 915 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 D + +NQ+LT+MDG EG G+ V+AAT+R D++DSALLRPGR D+ V D+PD R Sbjct: 916 TD---RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDR 972
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 145 bits (366), Expect = 9e-35 Identities = 78/184 (42%), Positives = 114/184 (61%), Gaps = 5/184 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+DDV G++ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 991 VTWDDVGGLNNVKDAVTETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1049 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1050 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1108 Query: 432 NDEREQTLNQLLTEMDGFEG----NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ ++QLL E+DG G + G+ V+ ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 1109 GGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSD 1168 Query: 600 VRGR 611 + Sbjct: 1169 THDK 1172
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 145 bits (365), Expect = 1e-34 Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 5/184 (2%) Frame = +3 Query: 63 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 PN G +DDV G+ K +E ++ L++PE F A G + G+L GPPGTGKTLLAK Sbjct: 1025 PNVG--WDDVGGLTNVKDALVETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAK 1081 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 AIA E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1082 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGN 1140 Query: 420 XXXXNDEREQTLNQLLTEMDGFEG----NTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 ++ ++QLL E+DG G + G+ V+ ATNR D+LD+ALLRPGRFD+ + + Sbjct: 1141 QGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYL 1200 Query: 588 DVPD 599 V D Sbjct: 1201 GVSD 1204
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 145 bits (365), Expect = 1e-34 Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 2/181 (1%) Frame = +3 Query: 63 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 242 PN G +DDV G++ K+D ++ +E K + + G + G+L GPPGTGKTLLAKA Sbjct: 714 PNVG--WDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPPGTGKTLLAKA 771 Query: 243 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 422 IA + FFS+ G E + M++G + VR +F+KA++ PC+VF DE+D+V Sbjct: 772 IATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSV-APQRGNQ 830 Query: 423 XXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + Sbjct: 831 GDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 890 Query: 597 D 599 D Sbjct: 891 D 891
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 145 bits (365), Expect = 1e-34 Identities = 78/184 (42%), Positives = 112/184 (60%), Gaps = 5/184 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+DDV G+ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 988 VTWDDVGGLGNVKDAITETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1046 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1047 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1105 Query: 432 NDEREQTLNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 1106 GGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSD 1165 Query: 600 VRGR 611 + Sbjct: 1166 THDK 1169
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 143 bits (361), Expect = 3e-34 Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 2/176 (1%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTLLAKA+A + Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 F + GSE ++ ++G G VR LF A+E++P IVF+DEIDA+ Sbjct: 249 TSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAE 308 Query: 435 DEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 E ++T+ +LL ++DGF+ I V+ ATNR LD AL+RPGR DR++ + PD Sbjct: 309 REIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPD 364
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 143 bits (360), Expect = 4e-34 Identities = 75/181 (41%), Positives = 111/181 (61%), Gaps = 6/181 (3%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++D+ G+D K + M+ ++ LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 836 VKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIAT 894 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 895 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 953 Query: 432 NDEREQTLNQLLTEMDGFEGNT-----GIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + Sbjct: 954 GGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 1013 Query: 597 D 599 D Sbjct: 1014 D 1014
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 143 bits (360), Expect = 4e-34 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 4/179 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++DV G+D K + ++ ++ +K PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 816 VKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIAT 874 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 875 NFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSV-APKRGNQGDS 933 Query: 432 NDEREQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ ++QLL E+DG +G G+ VV ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 934 EGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSD 992
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 142 bits (358), Expect = 8e-34 Identities = 70/176 (39%), Positives = 108/176 (61%), Gaps = 1/176 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+ +V + + + M +V+ +K+PE + VG P GVLL GPPG GKTLLAKA+A Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E+ F SI G E + +VG +R +F +A+ + PC++F DE+DA+ Sbjct: 590 ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDAL---VPRRDTSL 646 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ + +N LLTE+DG GI V+ ATNR D++D A+LRPGR D+ + +++P+ Sbjct: 647 SESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPN 702 Score = 130 bits (328), Expect = 2e-30 Identities = 77/184 (41%), Positives = 106/184 (57%), Gaps = 5/184 (2%) Frame = +3 Query: 63 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 PN+ + + G+D+ ME++ + PE F + G P+GVLL GPPG GKT +A Sbjct: 200 PNSSLK--SLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+AGE VPF SIS V G ++RDLF +A+ APC+VF DEIDA+ Sbjct: 258 ALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317 Query: 420 XXXXNDEREQTLNQLLTEMD--GFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSV 587 + R + QLLT MD E G +I++ ATNR D LD+AL R GRFDR++ + Sbjct: 318 AQREMERR--IVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICL 375 Query: 588 DVPD 599 +VP+ Sbjct: 376 NVPN 379
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 141 bits (355), Expect = 2e-33 Identities = 72/177 (40%), Positives = 107/177 (60%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V++ DV G+ E K++ +E ++ + ++G R G+LL GPPGTGKTLLAKA+A E Sbjct: 702 VSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 760 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 + F S+ G E + M+VG VR++F +A+ APCI+F DE+D++ Sbjct: 761 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSL-APSRGRSGDSG 819 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R Sbjct: 820 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDR 876 Score = 42.7 bits (99), Expect = 8e-04 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 1/117 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 371 VLL GPPG GKT + A G+ + S G ++++ +F +A+ P + Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525 Query: 372 VFVDEIDAVXXXXXXXXXXXNDEREQ-TLNQLLTEMDGFEGNTGIIVVAATNRADIL 539 + + +D + D R L LL D ++VVA T+RA L Sbjct: 526 LLLTAVDLL---GRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDL 579
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 140 bits (354), Expect = 2e-33 Identities = 74/176 (42%), Positives = 113/176 (64%), Gaps = 3/176 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DD+ G++EAK + ++ L+ PE F+ G + GVLL GPPGTGKTLLAKA+A Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVAT 710 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E + F SI G E + M+VG + VR++F+KA+ ++PC++F DE+D++ Sbjct: 711 ELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG 770 Query: 432 NDEREQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 N ++ ++QLL E+D + N + V+ ATNR D+LD +LLRPGRFD+ V + + Sbjct: 771 N-VMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGI 825 Score = 37.4 bits (85), Expect = 0.035 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Frame = +3 Query: 195 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC-I 371 LL G P TGKT + +A P F+IS EF + +++ D+F + +PC I Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-DMFVQNVVKSPCAI 484 Query: 372 VFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAAT 521 +FV ++D + +++ LL+++D + G +V T Sbjct: 485 IFVKDLDVLSISSDEGNIVPG---SKSIQILLSKIDLVKSPQGRYIVIGT 531
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 140 bits (353), Expect = 3e-33 Identities = 71/177 (40%), Positives = 107/177 (60%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V++ DV G+ + K++ +E ++ + ++G R G+LL GPPGTGKTLLAKA+A E Sbjct: 703 VSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 761 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 + F S+ G E + M+VG VR++F +A+ APCI+F DE+D++ Sbjct: 762 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSL-APSRGRSGDSG 820 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R Sbjct: 821 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDR 877 Score = 39.7 bits (91), Expect = 0.007 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 371 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 372 VFVDEIDAVXXXXXXXXXXXNDER-EQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 539 + + +D + D R TL LL + D ++VVA T+R L Sbjct: 527 LLLTAVDLL---GRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDL 580
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 140 bits (353), Expect = 3e-33 Identities = 71/177 (40%), Positives = 107/177 (60%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 V++ DV G+ + K++ +E ++ + ++G R G+LL GPPGTGKTLLAKA+A E Sbjct: 700 VSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 758 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 + F S+ G E + M+VG VR++F +A+ APCI+F DE+D++ Sbjct: 759 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSL-APSRGRSGDSG 817 Query: 435 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R Sbjct: 818 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDR 874 Score = 38.1 bits (87), Expect = 0.020 Identities = 30/117 (25%), Positives = 48/117 (41%), Gaps = 1/117 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 371 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 372 VFVDEIDAVXXXXXXXXXXXNDER-EQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 539 + + +D + D R TL LL + D ++VVA T+R L Sbjct: 526 LLLTALDLL---GRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDL 579
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 139 bits (351), Expect = 5e-33 Identities = 71/182 (39%), Positives = 108/182 (59%), Gaps = 1/182 (0%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPER-FTAVGARIPKGVLLVGPPGTGKTL 230 ++ T + + D+ + AK +E +E+ K E F R+ G+LL G PG GKTL Sbjct: 687 KLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTL 746 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LA A+A + G+ F S+ G E + F+G +R+LF++A+ PCI+F DE D++ Sbjct: 747 LASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKR 806 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 D + +NQLLT+MDG EG G+ ++AAT+R D++DSALLRPGR D+ V + Sbjct: 807 GHDSTGVTD---RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICN 863 Query: 591 VP 596 +P Sbjct: 864 IP 865
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 138 bits (347), Expect = 1e-32 Identities = 71/177 (40%), Positives = 111/177 (62%), Gaps = 2/177 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V ++D+ G++ K + ++ ++ LK PE F A G + G+L GPPGTGKTLLAKA+A Sbjct: 720 VFWEDIGGLEMVKGEILDTIDMPLKFPELF-ASGMKKRSGILFYGPPGTGKTLLAKAVAT 778 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 + FFS+ G E + M++G + VR +F++A++ PC++F DE+D+V Sbjct: 779 NFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSV-APKRGNQGDS 837 Query: 432 NDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 838 GGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISD 894
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 137 bits (345), Expect = 2e-32 Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 1/174 (0%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 +D + G+ E +Q M+ ++ K PE F + R G+LL GPPGTGKTLLA IA E+ Sbjct: 839 WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARES 898 Query: 258 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 437 + F S+ G E + ++G VRD+F +A+ PCI+F DE +++ D Sbjct: 899 RMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTD 958 Query: 438 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 + +NQLLT++DG EG G+ V+AAT+R D++D ALLRPGR D+ V PD Sbjct: 959 ---RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPD 1009
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 137 bits (344), Expect = 3e-32 Identities = 75/180 (41%), Positives = 104/180 (57%), Gaps = 1/180 (0%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V +DDV G+D + F +V +KKP+ + A G + G LL GPPG GKTL+AKA A Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAAN 584 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 EAG F I G+E + +VG +R LF++A+ APC++F DE+DA+ Sbjct: 585 EAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWV 644 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E+ LNQ L E+DG E + V+ ATNR D++D A LRPGRF + V +P+ R Sbjct: 645 ---VERLLNQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADER 700 Score = 136 bits (343), Expect = 4e-32 Identities = 82/201 (40%), Positives = 110/201 (54%), Gaps = 15/201 (7%) Frame = +3 Query: 54 QMEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 ++E G TF D G+ + + M V+ + PE F +G + P G+L GPPG GKT Sbjct: 223 EVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTK 282 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LA AIA EAGVPF+ IS +E + G +R+LF KA AP IVF+DEIDA+ Sbjct: 283 LANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---- 338 Query: 411 XXXXXXXNDERE---QTLNQLLTEMDGFEGNTG-----------IIVVAATNRADILDSA 548 N +RE + + QLLT MDG GN G ++V+ ATNR D LD A Sbjct: 339 --GSKRENQQREMEKRIVTQLLTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPA 395 Query: 549 LLRPGRFDRQVSVDVPDVRGR 611 L R GRF+ ++++ PD R Sbjct: 396 LRRSGRFETEIALTAPDEDAR 416
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 136 bits (342), Expect = 5e-32 Identities = 77/181 (42%), Positives = 108/181 (59%), Gaps = 2/181 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 VT+DDV G+ + K+ + VE+ +K F +G +G+LL GPPG KT LAKA A Sbjct: 283 VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAAN 342 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXXXXXX 428 A FFS+S +E M+VG G + +R+ F++A+ +P I+F DE D V Sbjct: 343 AAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSN 402 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 608 + E+ L+ LLTEMDG E GI+V+AATNR +D+AL+RPGRFD + V PD+ Sbjct: 403 SSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEA 462 Query: 609 R 611 R Sbjct: 463 R 463 Score = 90.9 bits (224), Expect = 3e-18 Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 8/183 (4%) Frame = +3 Query: 87 DVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV 263 ++ G + A Q E++ F + P +G + P+G+LL GPPGTGKT L +A+ E Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Query: 264 PFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXX 431 +S G +R+ F +A +A P ++F+DEID + Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVL----CPRRDAR 138 Query: 432 NDEREQTLNQLLTEMDGFEGNTG---IIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 602 ++ + +QL T MD + ++ ++VVA+TNR D +D AL R GRFD V V P+ Sbjct: 139 REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNE 198 Query: 603 RGR 611 R Sbjct: 199 EDR 201
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 124 bits (312), Expect = 2e-28 Identities = 63/173 (36%), Positives = 103/173 (59%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 260 F ++ G +EAK+ ++++L+ P+ F G PK VL GPPGTGKTL+A+A+A E Sbjct: 123 FSEIIGQEEAKKKCRIIMKYLENPKLF---GEWAPKNVLFYGPPGTGKTLMARALATETN 179 Query: 261 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 440 F + E + VG + +R+L+++A E+APCIVF+DE+DA+ + Sbjct: 180 SSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAI--GLSREYQSLRGD 237 Query: 441 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 + +N LLTE+DG + N G++ +AATN +LD A+ RF+ ++ +P+ Sbjct: 238 VSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPN 288
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 124 bits (311), Expect = 2e-28 Identities = 69/192 (35%), Positives = 104/192 (54%), Gaps = 18/192 (9%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 +TF D+ G++ KQ+ + V FL K + ++ P G L GPPGTGKTL+AKA++ E Sbjct: 346 ITFRDIGGMESLKQE-LATVAFLLKQKNYSN---SYPMGYLFAGPPGTGKTLMAKAMSYE 401 Query: 255 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 434 A P+ + GS+F GV +RV DLFK+ + +PCI+++DEID++ Sbjct: 402 AETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLE 461 Query: 435 DER------------------EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 560 + + L Q L MDG++ +I++ ATNR + LD A++RP Sbjct: 462 QLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRP 521 Query: 561 GRFDRQVSVDVP 596 GRFDRQ+ P Sbjct: 522 GRFDRQIVFSPP 533
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 123 bits (308), Expect = 5e-28 Identities = 77/189 (40%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 230 ++ T V FDD+AG D AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 333 VDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 390 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 391 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 447 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVS 584 +D + + L E DG + G+ ++V+ ATNR LD A+LR RF ++V Sbjct: 448 CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 505 Query: 585 VDVPDVRGR 611 V +P+ R Sbjct: 506 VSLPNEETR 514
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 123 bits (308), Expect = 5e-28 Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 6/185 (3%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 251 V FDD+ G+D E+V L PE + P+GVL GPPGTGKTL+A+A+A Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469 Query: 252 -----EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 416 E + FF G++ + +VG ++R LF++AK++ P I+F DEID + Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSS 529 Query: 417 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 + ++ LL MDG + +IV+ ATNR D +D AL RPGRFDR+ +P Sbjct: 530 KQEQIH---ASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLP 586 Query: 597 DVRGR 611 DV+ R Sbjct: 587 DVKAR 591
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 122 bits (307), Expect = 6e-28 Identities = 63/180 (35%), Positives = 104/180 (57%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 E + +T DDV G ++AK ++++L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVRSSITMDDVIGQEDAKIKCRIIMKYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 420 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 + + +N LLTEMDG N G++ + ATN ++LD A+ RF+ ++ +PD Sbjct: 234 YQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPD 291
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 122 bits (305), Expect = 1e-27 Identities = 74/191 (38%), Positives = 102/191 (53%), Gaps = 6/191 (3%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 M ++ V FD V G+ Q EVV F + PE F PKGV+ GPPGTGKTL+ Sbjct: 382 MSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441 Query: 234 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 A+A+A E V FF G++ + +VG ++R LF +A P I+F DEID + Sbjct: 442 ARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGL 501 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + ++ LL MDG +G ++V+ ATNR D LD AL RPGRFDR+ Sbjct: 502 APVRSSKQDQIH---ASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRE 558 Query: 579 VSVDVPDVRGR 611 + +PD+ R Sbjct: 559 LRFSLPDLNAR 569
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 121 bits (304), Expect = 1e-27 Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 4/189 (2%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 230 ++ T V FDD+AG + AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 331 VDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 388 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 389 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 445 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVS 584 +D + + L E DG + G+ ++V+ ATNR LD A+LR RF ++V Sbjct: 446 CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 503 Query: 585 VDVPDVRGR 611 V +P+ R Sbjct: 504 VSLPNEETR 512
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 121 bits (303), Expect = 2e-27 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 21/202 (10%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHK-ELYREYALRPPKGVLLYGPPGCGKTL 301 Query: 231 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 362 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 363 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 533 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 534 ILDSALLRPGRFDRQVSVDVPD 599 ++D A+LRPGR D ++ ++ PD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 120 bits (302), Expect = 2e-27 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 21/202 (10%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 231 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 362 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 363 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 533 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 534 ILDSALLRPGRFDRQVSVDVPD 599 ++D A+LRPGR D ++ ++ PD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 120 bits (302), Expect = 2e-27 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 21/202 (10%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 230 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 231 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 362 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 363 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 533 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 534 ILDSALLRPGRFDRQVSVDVPD 599 ++D A+LRPGR D ++ ++ PD Sbjct: 420 MIDPAILRPGRLDVKIKIERPD 441
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 120 bits (300), Expect = 4e-27 Identities = 62/179 (34%), Positives = 103/179 (57%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 239 E + +T DDV G ++AK ++ +L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVKSDITMDDVIGQEDAKIKCRIIMRYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 420 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 596 + + +N LLTEMDG N G++ + ATN ++LD+A+ RF+ ++ +P Sbjct: 234 FQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLP 290
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 117 bits (293), Expect = 3e-26 Identities = 73/191 (38%), Positives = 99/191 (51%), Gaps = 6/191 (3%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 M+ +T V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 72 MQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 131 Query: 234 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 132 ARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGL 191 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 192 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDRE 248 Query: 579 VSVDVPDVRGR 611 +PD R Sbjct: 249 FLFSLPDKNAR 259
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 117 bits (293), Expect = 3e-26 Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 3/194 (1%) Frame = +3 Query: 39 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPP 212 S A +PN V ++DVAG++ AK+ E V +K P F G R P G+LL GPP Sbjct: 120 SSAILSEKPN--VKWEDVAGLEGAKEALKEAVILPVKFPHLFK--GNRKPTSGILLYGPP 175 Query: 213 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 392 GTGK+ LAKA+A EA FFS+S S+ V ++G V+ LF A+EN P I+F+DE+D Sbjct: 176 GTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVD 235 Query: 393 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALLRPGRF 569 A+ ++ + +LL +M+G ++ G++V+ ATN LDSA+ R RF Sbjct: 236 AL---TGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RF 290 Query: 570 DRQVSVDVPDVRGR 611 +R++ + +PD+ R Sbjct: 291 ERRIYIPLPDLAAR 304
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 117 bits (293), Expect = 3e-26 Identities = 71/186 (38%), Positives = 112/186 (60%), Gaps = 2/186 (1%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 236 +PN V +DD+AG++ AK+ E V +K P+ F+ G + G+LL GPPGTGK+ LA Sbjct: 123 KPN--VRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLA 179 Query: 237 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 416 KA+A EAG FFSIS S+ V ++G VR LF+ A+E P I+F+DEID++ Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL---CGS 236 Query: 417 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 593 ++ + + L +M+G + +G++V+ ATN LDSA+ R RF++++ + + Sbjct: 237 RSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPL 294 Query: 594 PDVRGR 611 P+ R Sbjct: 295 PNAHAR 300
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 115 bits (289), Expect = 8e-26 Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 6/191 (3%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 248 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 307 Query: 234 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 308 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 367 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 368 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDRE 424 Query: 579 VSVDVPDVRGR 611 +PD R Sbjct: 425 FLFSLPDKEAR 435
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 115 bits (288), Expect = 1e-25 Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 6/191 (3%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 233 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 417 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 476 Query: 234 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 477 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 536 Query: 399 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 578 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 537 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDRE 593 Query: 579 VSVDVPDVRGR 611 +PD R Sbjct: 594 FLFSLPDKEAR 604
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 114 bits (284), Expect = 3e-25 Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 4/183 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 248 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 249 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 425 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSE 245 Query: 426 XXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 602 ++ + + L +M G N GI+V+ ATN +LDSA+ R RF++++ + +P+ Sbjct: 246 NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEA 303 Query: 603 RGR 611 R Sbjct: 304 HAR 306
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 113 bits (282), Expect = 5e-25 Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 4/183 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 248 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 249 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 425 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSE 245 Query: 426 XXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 602 ++ + + L +M G N GI+V+ ATN +LDSA+ R RF++++ + +P+ Sbjct: 246 NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEP 303 Query: 603 RGR 611 R Sbjct: 304 HAR 306
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 109 bits (273), Expect = 6e-24 Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 9/194 (4%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 230 ++ N V + D+AG+ EAK+ E V L P+ F G R P KGVL+VGPPGTGKT+ Sbjct: 225 VQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRPWKGVLMVGPPGTGKTM 282 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E G FF++S + + G VR LF+ A+ AP +F+DEID++ Sbjct: 283 LAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSI--CS 340 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRF 569 ++ + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 341 KRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RL 398 Query: 570 DRQVSVDVPDVRGR 611 ++++ + +P++ GR Sbjct: 399 EKRIYIPLPEIDGR 412
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 108 bits (270), Expect = 1e-23 Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 12/194 (6%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N + +DD+A ++EAK+ E V + P+ F G R P KGVL+VGPPGTGKT+LAK Sbjct: 202 NPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAK 259 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CS 314 Query: 420 XXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRF 569 +DE E + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 315 RRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RL 372 Query: 570 DRQVSVDVPDVRGR 611 ++++ + +P +GR Sbjct: 373 EKRIYIPLPTAKGR 386
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 108 bits (270), Expect = 1e-23 Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 12/194 (6%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N + +DD+A ++EAK+ E V + P+ F G R P KGVL+VGPPGTGKT+LAK Sbjct: 200 NPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAK 257 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ Sbjct: 258 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CS 312 Query: 420 XXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRF 569 +DE E + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 313 RRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RL 370 Query: 570 DRQVSVDVPDVRGR 611 ++++ + +P +GR Sbjct: 371 EKRIYIPLPTAKGR 384
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 108 bits (270), Expect = 1e-23 Identities = 73/194 (37%), Positives = 110/194 (56%), Gaps = 12/194 (6%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N + +DD+A ++EAK+ E V + P+ F G R P KGVL+VGPPGTGKT+LAK Sbjct: 200 NPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAK 257 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ Sbjct: 258 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CS 312 Query: 420 XXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRF 569 +DE E + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 313 RRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RL 370 Query: 570 DRQVSVDVPDVRGR 611 ++++ + +P +GR Sbjct: 371 EKRIYIPLPTAKGR 384
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 108 bits (269), Expect = 2e-23 Identities = 73/191 (38%), Positives = 105/191 (54%), Gaps = 9/191 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N + +DD+A ++EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 200 NPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 257 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E FF+IS S + G VR LF+ A+ AP +F+DEID++ Sbjct: 258 AVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 317 Query: 420 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 578 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 318 EEHEASRRVKA--ELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKR 373 Query: 579 VSVDVPDVRGR 611 + + +P +GR Sbjct: 374 IYIPLPSAKGR 384
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 107 bits (268), Expect = 2e-23 Identities = 75/196 (38%), Positives = 107/196 (54%), Gaps = 11/196 (5%) Frame = +3 Query: 57 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 230 ++ GV +DDVAG+ EAK+ E V L PE F G R P KGVL+ GPPGTGKTL Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTL 287 Query: 231 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 LAKA+A E G FF++S + + G VR LF A+ AP +F+DEID++ Sbjct: 288 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGFEGNTG---------IIVVAATNRADILDSALLRPG 563 + R + ++LL ++DG NT ++V+AATN +D AL R Sbjct: 348 GGSGEHESSRRVK--SELLVQVDGV-SNTATNEDGSRKIVMVLAATNFPWDIDEALRR-- 402 Query: 564 RFDRQVSVDVPDVRGR 611 R ++++ + +PD R Sbjct: 403 RLEKRIYIPLPDFESR 418
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 107 bits (266), Expect = 4e-23 Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 4/188 (2%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 233 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 234 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---C 233 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 ++ + + L +M G N G +V+ ATN +LDSA+ R RF++++ + Sbjct: 234 GSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYI 291 Query: 588 DVPDVRGR 611 +P+ R Sbjct: 292 PLPEEAAR 299
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 107 bits (266), Expect = 4e-23 Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 4/188 (2%) Frame = +3 Query: 60 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 233 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 234 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 410 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---C 233 Query: 411 XXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 ++ + + L +M G N G +V+ ATN +LDSA+ R RF++++ + Sbjct: 234 GSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYI 291 Query: 588 DVPDVRGR 611 +P+ R Sbjct: 292 PLPEEAAR 299
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 106 bits (264), Expect = 6e-23 Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Frame = +3 Query: 39 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVV--EFLKKPERFTAVGARIPKGVLLVGPP 212 S+ K + P+ + + G+D QD + PE + + KG+LL GPP Sbjct: 260 SRRKQIINPDFKLEDLGIGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPP 319 Query: 213 GTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASRVRDLFK--------KAKENAP 365 GTGKTL+A+ ++ G ++G E + +VG +R+LFK K +++ Sbjct: 320 GTGKTLIARKLSKMLNGKEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDL 379 Query: 366 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDS 545 ++ DE+D+V + +NQLL++MDG + I+V+ TNR D++D+ Sbjct: 380 HVIIFDELDSVFKQRGSGKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDT 439 Query: 546 ALLRPGRFDRQVSVDVPDVRGR 611 ALLRPGRF+ Q+ + +PD +GR Sbjct: 440 ALLRPGRFEIQIEISLPDEKGR 461 Score = 38.9 bits (89), Expect = 0.012 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = +3 Query: 186 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASR----VRDLFKKAK 353 + +LL GPPG GKT +A +A + PF + + E VG+G R + ++F+ Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSA---ETLVGMGELRKIQEIDNVFRDVH 650 Query: 354 ENAPCIVFVDEIDAV 398 ++ ++ +D+I+ + Sbjct: 651 KSPLNVLVIDKIENI 665
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 106 bits (264), Expect = 6e-23 Identities = 72/191 (37%), Positives = 104/191 (54%), Gaps = 9/191 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N V +DD+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 420 XXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQ 578 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 579 VSVDVPDVRGR 611 + + +P +GR Sbjct: 377 IYIPLPSAKGR 387
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 104 bits (260), Expect = 2e-22 Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 10/164 (6%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 323 P +G KG+LL GPPGTGKTL+A+ I A P ++G E + +VG Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEE 321 Query: 324 RVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 479 +R+LFK K +E++ I+ DE+D+V + +NQLL +MD Sbjct: 322 NIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG-VGDNVVNQLLAKMD 380 Query: 480 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 G + I+V+ TNR D++DSALLRPGRF+ QV + +PD +GR Sbjct: 381 GVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGR 424 Score = 36.6 bits (83), Expect = 0.059 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 368 +L+ GP G+GKT LA IA ++G PF IS +E M + + + F+ A ++ Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 369 IVFVDEIDAV 398 I+ +D ++ + Sbjct: 620 ILVIDSLETL 629
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 103 bits (256), Expect = 5e-22 Identities = 64/164 (39%), Positives = 91/164 (55%), Gaps = 10/164 (6%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 323 PE +G + +G+LL GPPGTGKTL+A+ I A P ++G + ++ +VG S Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESES 377 Query: 324 RVRDLFKKAKEN-APC-------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 479 VR LF A+E C I+ DEIDA+ + + +NQLL++MD Sbjct: 378 NVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSS-VHDTVVNQLLSKMD 436 Query: 480 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 G E I+V+ TNR D++D ALLRPGR + Q+ V +PD GR Sbjct: 437 GVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGR 480 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 368 V+L G TGKT LA +A + PF IS + V ++ F+ AK + Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLS 675 Query: 369 IVFVDEID 392 ++ +D ++ Sbjct: 676 VLLIDNLE 683
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 103 bits (256), Expect = 5e-22 Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 9/163 (5%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASR 326 P + +G + KG+LL GPPGTGKTL+A+ I G ++G E + FVG Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 327 VRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 482 VRDLF A+++ ++ DEIDA+ + +NQLLT++DG Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTG-VHDSIVNQLLTKIDG 357 Query: 483 FEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 E ++++ TNR D+LD ALLRPGR + QV + +PD GR Sbjct: 358 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGR 400 Score = 35.0 bits (79), Expect = 0.17 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +3 Query: 195 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE-FVEMFVGVGASRVRDLFKKAKENAPCI 371 LL GP G+GKT LA I ++ P+ I +E + + + + +F+ A ++ I Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 372 VFVDEID 392 + +D+I+ Sbjct: 594 IILDDIE 600
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 102 bits (254), Expect = 9e-22 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 9/191 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N V + D+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 420 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 578 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 579 VSVDVPDVRGR 611 + + +P +GR Sbjct: 377 IYIPLPSAKGR 387
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 102 bits (254), Expect = 9e-22 Identities = 71/191 (37%), Positives = 103/191 (53%), Gaps = 9/191 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 239 N V + D+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 240 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 419 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 420 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 578 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRMKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 579 VSVDVPDVRGR 611 + + +P +GR Sbjct: 377 IYIPLPSAKGR 387
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 100 bits (249), Expect = 3e-21 Identities = 60/164 (36%), Positives = 91/164 (55%), Gaps = 10/164 (6%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 323 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 300 Query: 324 RVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 479 VR LF +A+E I+ DEIDA+ + +NQLLT++D Sbjct: 301 NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSG-VHDTVVNQLLTKID 359 Query: 480 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 G + I+V+ TNR D++D ALLRPGR + Q+ + +P+ +GR Sbjct: 360 GVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 403 Score = 35.0 bits (79), Expect = 0.17 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Frame = +3 Query: 93 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 272 A V +D M V+ K PE V VL+ G P +GKT LA +A + PF Sbjct: 512 APVSNLLEDGMLYVQQAKAPESSGLVS------VLVAGAPNSGKTALAAQLAKMSDFPFV 565 Query: 273 SI-SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 392 + S + V +R +F A + + VD ++ Sbjct: 566 KVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCIVVDNVE 606
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 99.4 bits (246), Expect = 7e-21 Identities = 59/164 (35%), Positives = 90/164 (54%), Gaps = 10/164 (6%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 323 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 305 Query: 324 RVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 479 +R LF +A+E I+ DEIDA+ + +NQLL ++D Sbjct: 306 NIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSG-VHDTVVNQLLAKID 364 Query: 480 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 G E I+V+ TNR D++D ALLRPGR + Q+ + +P+ +GR Sbjct: 365 GVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGR 408 Score = 30.4 bits (67), Expect = 4.2 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +3 Query: 99 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 278 V E +D M V+ K E V VL+ G P +GK+ LA +A + PF + Sbjct: 519 VTELLEDGMLSVQQAKATESSGLVS------VLIEGAPNSGKSALAANLAQLSDFPFVKV 572 Query: 279 -SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 392 S + V +R +F A + + VD ++ Sbjct: 573 CSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVE 611
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 99.4 bits (246), Expect = 7e-21 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 22/201 (10%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 248 V +DD+AG++ AK E V + +P+ F G R P +G+LL GPPGTGKT+LA+A+A Sbjct: 602 VHWDDIAGLESAKYSLKEAVVYPFLRPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVA 659 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 E+ FFSIS S ++G VR LF AK+ +P I+FVDEID++ Sbjct: 660 TESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSI--MGSRNNEN 717 Query: 429 XNDEREQTLNQLL--------------------TEMDGFEGNTGIIVVAATNRADILDSA 548 N+ + N+ L ++ +G E +T ++V+AATN +D A Sbjct: 718 ENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEA 777 Query: 549 LLRPGRFDRQVSVDVPDVRGR 611 R RF R+ + +P+ + R Sbjct: 778 ARR--RFVRRQYIPLPEDQTR 796
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 99.4 bits (246), Expect = 7e-21 Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 5/184 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 248 ++ DD+ G+ + KQ E V L PE F G R P K ++L GPPGTGKTL+A+AIA Sbjct: 190 MSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIA 247 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 E+ FF++S ++ + G VR LF+ A+ AP I+F+DEID + Sbjct: 248 SESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTL--GGQRGNSG 305 Query: 429 XNDEREQTLNQLLTEMDGFEG---NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ + ++ L +MDG + + + V+AATN LD AL R RF++++ + +PD Sbjct: 306 EHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPD 363 Query: 600 VRGR 611 + R Sbjct: 364 IDAR 367
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 99.0 bits (245), Expect = 1e-20 Identities = 65/193 (33%), Positives = 100/193 (51%), Gaps = 14/193 (7%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 248 V ++D+AG+ AK E V + +P+ F G R P +G+LL GPPGTGKT++AKA+A Sbjct: 468 VYWEDIAGLRNAKNSLKEAVVYPFLRPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVA 525 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 E+ FFS+S S + ++G VR LF AK+ +P I+F+DEID++ Sbjct: 526 TESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSM---LTARSDN 582 Query: 429 XNDEREQTLNQLLTEMDGFEGNTG------------IIVVAATNRADILDSALLRPGRFD 572 N+ + +LL + T ++V+ ATN +D A R RF Sbjct: 583 ENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFS 640 Query: 573 RQVSVDVPDVRGR 611 R++ + +PD R Sbjct: 641 RKLYIPLPDYETR 653
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 99.0 bits (245), Expect = 1e-20 Identities = 64/170 (37%), Positives = 92/170 (54%), Gaps = 5/170 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFT-AVGARIPKGVLLVGPPGTGKTLLAKAIA 248 +TF D+ G+D D E V + L PE ++ + + P GVLL GPPG GKT+LAKA+A Sbjct: 88 ITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALA 147 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 E+G F SI S ++ + G V +F A + PCI+F+DEID+ Sbjct: 148 KESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDS----FLRERSS 203 Query: 429 XNDEREQTLN-QLLTEMDGFEGNTGIIVVAATNRADILDSALLR--PGRF 569 + E TL + +T DG N ++++ ATNR + +D A LR P RF Sbjct: 204 TDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLRRLPKRF 253
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 99.0 bits (245), Expect = 1e-20 Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 13/167 (7%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 314 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 315 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 470 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 471 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++DG E I+V+ TNR D++D ALLRPGR + ++ + +PD +GR Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403 Score = 37.7 bits (86), Expect = 0.027 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 368 VLL GPP +GKT +A IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 369 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 539 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 99.0 bits (245), Expect = 1e-20 Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 13/167 (7%) Frame = +3 Query: 150 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 314 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 315 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 470 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 471 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++DG E I+V+ TNR D++D ALLRPGR + ++ + +PD +GR Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGR 403 Score = 38.9 bits (89), Expect = 0.012 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 368 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 369 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 539 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 97.4 bits (241), Expect = 3e-20 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 15/189 (7%) Frame = +3 Query: 90 VAGVDEAKQD-FMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----A 248 + G+D+ D F F + PE +G KG+LL GPPG GKTLLA+ I A Sbjct: 220 IGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXX 404 E V ++G E + +VG + +R LF A+E + I+ DEIDA+ Sbjct: 280 REPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICK 335 Query: 405 XXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVS 584 + +NQLL+++DG E I+V+ TNR D++D ALLRPGR + ++ Sbjct: 336 QRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKME 394 Query: 585 VDVPDVRGR 611 + +PD +GR Sbjct: 395 IGLPDEKGR 403 Score = 38.9 bits (89), Expect = 0.012 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 368 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 369 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 539 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 97.4 bits (241), Expect = 3e-20 Identities = 45/60 (75%), Positives = 52/60 (86%) Frame = +3 Query: 432 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+GR Sbjct: 13 HDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGR 72
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 97.1 bits (240), Expect = 4e-20 Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 15/195 (7%) Frame = +3 Query: 72 GVTFDDVAGVDEAKQDFMEV-----VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 236 G F+D+ G+ +F + L P +G KG+LL GPPGTGKTL+A Sbjct: 263 GFKFEDM-GIGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIA 321 Query: 237 KAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--------ENAPCIVFVDE 386 + I A P ++G E + +VG VR LF A+ E+ I+ DE Sbjct: 322 RQIGKMLNAREPKI-VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDE 380 Query: 387 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGR 566 +DA+ +Q +NQLL +MDG + I+V+ TNR D++D ALLRPGR Sbjct: 381 LDAICKKRGSSGGDTG-VGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGR 439 Query: 567 FDRQVSVDVPDVRGR 611 + + + +PD GR Sbjct: 440 LEVHMEISLPDEHGR 454 Score = 37.4 bits (85), Expect = 0.035 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = +3 Query: 132 VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFV 308 V+ +K ER V VLL GP +GKT LA IA + PF +S V M Sbjct: 574 VQQVKNSERTRLVS------VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNE 627 Query: 309 GVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 + V +F+ + ++ ++ VDEI+ + Sbjct: 628 NARVAHVNRVFEDSYKSPLSVIVVDEIERI 657
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 95.1 bits (235), Expect = 1e-19 Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 5/184 (2%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 245 +T+ D+AG+DE + + V L +R G+R+ PKGVLL GPPG GKTL+AKA Sbjct: 92 ITWHDIAGLDEVITELKDTV-ILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKAT 150 Query: 246 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 425 A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 151 AKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSS 207 Query: 426 XXNDEREQTLNQLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++ Q ++ DG + N +I++ ATNR LDSA+LR R + ++ P+ Sbjct: 208 SDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPN 265 Query: 600 VRGR 611 VR R Sbjct: 266 VRQR 269
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 92.8 bits (229), Expect = 7e-19 Identities = 52/136 (38%), Positives = 77/136 (56%) Frame = +3 Query: 81 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 260 F D+ G+ + + E+V FL+ R +P G+LL GPPGTGKTLL +A+AGEA Sbjct: 973 FTDIVGIQKVLLELYEIVLFLRNSGRNFTHSETLPHGILLTGPPGTGKTLLVQALAGEAQ 1032 Query: 261 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 440 VP +SGS +E A +++ +F++A++ APCIVF+DEID + + + Sbjct: 1033 VPVIVLSGSSLMEPGES-AAFKLQLVFQEARQLAPCIVFIDEIDTL-----------SSK 1080 Query: 441 REQTLNQLLTEMDGFE 488 R Q L + GFE Sbjct: 1081 RSQLLQNPMANDPGFE 1096 Score = 67.8 bits (164), Expect = 2e-11 Identities = 37/99 (37%), Positives = 53/99 (53%) Frame = +3 Query: 315 GASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN 494 GA + D FKK K+N N+++ L+QLL E+DG +G Sbjct: 1125 GAKKEFDNFKKQKKNP----------------AEYNSKQNEKQVSLLSQLLIELDGIQGR 1168 Query: 495 TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 G+++ ATNR ++LD ALLRPGRFD+ V V +P + R Sbjct: 1169 NGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKR 1207
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 91.3 bits (225), Expect = 2e-18 Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 1/183 (0%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 242 N D+ G++E K F K+ E + G IPKG+LLVG GTGK+L AK+ Sbjct: 238 NPVTKISDIGGLNELKSWLKFRAASFSKRAEEY---GLPIPKGLLLVGIQGTGKSLTAKS 294 Query: 243 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 422 IA E +P + +G +RVR + + A+ +PCI+++DEID Sbjct: 295 IANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNN 354 Query: 423 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 602 +R +T + E + + VVA N D L LLR GRFD + +PD+ Sbjct: 355 DSGTTKR--VFGTFITWLS--EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDL 410 Query: 603 RGR 611 + R Sbjct: 411 KER 413
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 89.7 bits (221), Expect = 6e-18 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 8/176 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 233 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLR--PGRF 569 ++ Q ++ DG + + +IV+ ATNR LDSA++R P RF Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRF 255
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 89.7 bits (221), Expect = 6e-18 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 8/176 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 233 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLR--PGRF 569 ++ Q ++ DG + + +IV+ ATNR LDSA++R P RF Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRF 255
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 89.7 bits (221), Expect = 6e-18 Identities = 63/176 (35%), Positives = 91/176 (51%), Gaps = 8/176 (4%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 233 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLR--PGRF 569 ++ Q ++ DG + + +IV+ ATNR LDSA++R P RF Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRF 255
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 89.4 bits (220), Expect = 8e-18 Identities = 61/182 (33%), Positives = 91/182 (50%), Gaps = 3/182 (1%) Frame = +3 Query: 75 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 245 VT+ DVAG+DE + + V L +R G+++ PKGVLL GPPG GKTL+AKA Sbjct: 91 VTWRDVAGLDEIISEMQDTV-ILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKAT 149 Query: 246 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 425 A +G F ++ S + + G +F A + PCI+F+DEID+ Sbjct: 150 AKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDH 209 Query: 426 XXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 605 + L +D E N+ ++V+ ATNR +D+A+LR R V +P+ Sbjct: 210 EATAMMKAQFMSLWDGLDTGE-NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAA 266 Query: 606 GR 611 R Sbjct: 267 QR 268
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 87.0 bits (214), Expect = 4e-17 Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 5/187 (2%) Frame = +3 Query: 66 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAV-GARI---PKGVLLVGPPGTGKTLL 233 + G +D++ G +E E+ + + P RF + G+ + P+G+LL GPPG GKTLL Sbjct: 77 DVGADWDEIGGCEEL---VAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLL 133 Query: 234 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 413 AKA+A AG F ++ S + + G +F A++ P I+F+DEID+ Sbjct: 134 AKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDS---FLR 190 Query: 414 XXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVD 590 ++ Q +T DGF + IIV+ ATNR +D+A+LR R + V Sbjct: 191 DRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVP 248 Query: 591 VPDVRGR 611 VP+ + R Sbjct: 249 VPNAKQR 255
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 82.0 bits (201), Expect = 1e-15 Identities = 58/184 (31%), Positives = 89/184 (48%), Gaps = 9/184 (4%) Frame = +3 Query: 87 DVAGVDEAKQDFMEVVEFLKKPERFTAV-----GARIPKGVLLVGPPGTGKTLLAKAIAG 251 ++ GVD K ++LKK + + G P+G+LL+G GTGK+L AKAIA Sbjct: 229 NIGGVDNLK-------DWLKKRKTSFTIQASNYGLPTPRGLLLIGIQGTGKSLTAKAIAT 281 Query: 252 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 431 E +P + VG SR+R + A+ +PCI+++DE+D Sbjct: 282 EWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMD--------KAFSN 333 Query: 432 NDER--EQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ND R T N++L + E + VVA N D+L ++R GRFD +D+P+ Sbjct: 334 NDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPE 393 Query: 600 VRGR 611 + R Sbjct: 394 LEER 397
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 80.9 bits (198), Expect = 3e-15 Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 5/177 (2%) Frame = +3 Query: 84 DDVAGVDEAKQDFMEVVEFLKKPERFTA-----VGARIPKGVLLVGPPGTGKTLLAKAIA 248 +D+ G+D K +LKK R + G PKG+LLVG GTGK+L AKAIA Sbjct: 228 EDIGGLDALKS-------WLKKRSRSFSKQSFNYGIPTPKGLLLVGIQGTGKSLTAKAIA 280 Query: 249 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 428 + +P + + VG SR+R++ A+ +PC++++DEID Sbjct: 281 NDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDS 340 Query: 429 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 R +T + E T + VVA N L S +LR GRFD +D+P+ Sbjct: 341 GTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPN 393
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 77.0 bits (188), Expect = 4e-14 Identities = 47/157 (29%), Positives = 81/157 (51%) Frame = +3 Query: 129 VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 308 +V+ ++ + G ++ +L GPPG GKTL A+ A E G+P F + + ++ Sbjct: 100 LVKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYL 159 Query: 309 GVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 488 G A+ +R F+ A++ PC++F DE DA+ ++E + +N LL +D + Sbjct: 160 GETATNIRKTFEFARKQ-PCVLFFDEFDAL--ARTRDDSGEHNELRRVVNSLLLFIDNMQ 216 Query: 489 GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 599 ++AATN LD+A+ R RFD + D P+ Sbjct: 217 PKG--FLIAATNLDRSLDAAIWR--RFDEVLWFDRPE 249
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 7/156 (4%) Frame = +3 Query: 126 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 299 +V EF+ P+ +T G +G LL GPPG GK+ A+AGE + S++ S + Sbjct: 204 DVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263 Query: 300 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ-----TLNQL 464 R+ L A + + +V ++++DA N + Q T + L Sbjct: 264 -------DRLNHLLSVAPQQS--LVLLEDVDA--AFLSRDLAVENPVKYQGLGRLTFSGL 312 Query: 465 LTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 572 L +DG IV TN D LD AL+RPGR D Sbjct: 313 LNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/165 (29%), Positives = 77/165 (46%) Frame = +3 Query: 93 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 272 +G+ E D +V +F+K + ++ G +G LL GPPG+GKT +A+AGE Sbjct: 232 SGIKEGILD--DVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNIC 289 Query: 273 SISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT 452 ++ SE + R+ L E + I+ +++IDA T Sbjct: 290 ILNLSE-----NNLTDDRLNHLMNNMPERS--ILLLEDIDA-AFNKRSQTGEQGFHSSVT 341 Query: 453 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 + LL +DG + I TN + LD+A++RPGR D +V V Sbjct: 342 FSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 62.4 bits (150), Expect = 1e-09 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Frame = +3 Query: 93 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 272 +GV E D +V EF+ P+ +T G +G LL GPPG GK+ A+AGE G Sbjct: 195 SGVAERIVD--DVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSIC 252 Query: 273 SISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX----XXXXXXXNDE 440 +S S+ + R+ L A + + I+ ++++DA Sbjct: 253 LMSLSD-----RSLSDDRLNHLLSVAPQQS--IILLEDVDAAFVSRELLPTENPLAYQGM 305 Query: 441 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 572 T + LL +DG + IV TN + LD AL+RPGR D Sbjct: 306 GRLTFSGLLNALDGVASSEARIVFMTTNFIERLDPALVRPGRVD 349
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 60.5 bits (145), Expect = 4e-09 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 5/154 (3%) Frame = +3 Query: 126 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 299 +V F++ P+ ++ G +G LL GPPG GK+ A+AGE + S+S S + Sbjct: 204 DVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD 263 Query: 300 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX---XXXNDEREQTLNQLLT 470 R+ L A + + I+ ++++DA T + LL Sbjct: 264 -------DRLNHLLSVAPQQS--IILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLN 314 Query: 471 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 572 +DG IV TN D LD AL+RPGR D Sbjct: 315 ALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 58.5 bits (140), Expect = 1e-08 Identities = 42/149 (28%), Positives = 67/149 (44%) Frame = +3 Query: 126 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 305 +V +FL+ + + G +G LL GPPG+GKT A+AGE ++ +E Sbjct: 223 DVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAE----- 277 Query: 306 VGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF 485 G+ R+ L A +V ++++D+ T + LL +DG Sbjct: 278 KGLTDDRLNHLLSNVPPKA--VVLLEDVDS-AFQGRERSGEVGFHANVTFSGLLNALDGV 334 Query: 486 EGNTGIIVVAATNRADILDSALLRPGRFD 572 + I+ TN + LD AL+RPGR D Sbjct: 335 TSSDERIIFMTTNHPEKLDPALVRPGRVD 363
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 58.5 bits (140), Expect = 1e-08 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 7/156 (4%) Frame = +3 Query: 126 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 299 ++ EF+ P+ + G +G LL GPPG GK+ A+AGE + S++ S + Sbjct: 204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263 Query: 300 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ-----TLNQL 464 R+ L A + + +V ++++DA N + Q T + L Sbjct: 264 -------DRLNHLLSVAPQQS--LVLLEDVDA--AFLSRDLAVENPIKYQGLGRLTFSGL 312 Query: 465 LTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 572 L +DG IV TN D LD AL+RPGR D Sbjct: 313 LNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 56.2 bits (134), Expect = 7e-08 Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Frame = +3 Query: 186 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV--------EMFVGV---GASRVR 332 KG+LLVGP GK+ L K +A ++ VP IS S+ + E ++ + R+ Sbjct: 1652 KGILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRLT 1711 Query: 333 DLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT------LNQLLTEMDGFEGN 494 + + AK+ +PCI+++ +I + N E + T L TE + Sbjct: 1712 LILELAKKMSPCIIWIQDIHEL----NVNRSTENVESDPTFLLGILLKYFHTEFIS-KST 1766 Query: 495 TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 602 GII++ +T+ +D AL+ P R D+ +++ + D+ Sbjct: 1767 KGIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDI 1802
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 56.2 bits (134), Expect = 7e-08 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 22/161 (13%) Frame = +3 Query: 171 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS-----------------GSEFVE 299 G+ + KG+LL+GP GTG++ L K++A ++ VP IS +EF + Sbjct: 1366 GSLLSKGILLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEF-D 1424 Query: 300 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 479 FV + AK +PCI+++ I + + L+ L+ + Sbjct: 1425 PFVKDKMEDFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLF 1484 Query: 480 GF-----EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 587 F + I+V+A+T+ +D AL+ P R DR +++ Sbjct: 1485 RFRDGEKDSMRNILVIASTHIPQRVDPALIAPNRLDRSINI 1525
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 53.9 bits (128), Expect = 4e-07 Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 17/164 (10%) Frame = +3 Query: 171 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV--------EMFVGVGASR 326 G KG+LL+GP TG++ L K +A E+ VP F IS ++ + E ++ + Sbjct: 1393 GLSYSKGILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIES 1452 Query: 327 VRDL---FKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT------LNQLLTEMD 479 +R L AK+ +PCI+++ I + N E + T L T+ Sbjct: 1453 LRRLNLTLDFAKKMSPCIIWIQNIHQL----NVNRLTQNVESDPTFLLGILLKYFQTDFS 1508 Query: 480 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 + N IIV+ +T+ +D AL+ P R D+ ++V + ++ R Sbjct: 1509 KTKKN-NIIVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQR 1551
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 50.4 bits (119), Expect = 4e-06 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%) Frame = +3 Query: 171 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV-----------------E 299 G+ KG+LL+GP GTG++ L K++A ++ VP IS + + Sbjct: 619 GSLFSKGILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFN 678 Query: 300 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 479 F F+ AK +PCI+++ I + + L LL + Sbjct: 679 TFWRDTIDHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYIS 738 Query: 480 -GFEGNT--GIIVVAATNRADILDSALLRPGRFDRQVSV 587 G E ++ I+ +A+T+ +D AL+ P R D +++ Sbjct: 739 RGGEKDSIRNILFIASTHIPQRVDPALIAPNRLDSSINI 777
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 50.1 bits (118), Expect = 5e-06 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 1/141 (0%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK-ENAPC 368 +LL GPPGTGKTL AK +A +G+ + ++G + M G + + LF A Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHKLFDWANTSRRGL 406 Query: 369 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 548 ++F+DE DA + + TLN L M + + ++V A+N + D A Sbjct: 407 LLFMDEADA--FLRKRATEEISKDLRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCA 462 Query: 549 LLRPGRFDRQVSVDVPDVRGR 611 + R D V D+P R Sbjct: 463 I--NSRIDVMVHFDLPQQEER 481
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 49.3 bits (116), Expect = 9e-06 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Frame = +3 Query: 84 DDVAGVDEAKQDFMEVVEFL---KKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 254 +DV D+AK+ + + +KP++ + LL GPPG GKT L +AIA E Sbjct: 22 EDVVNQDQAKKILVPWFKAWLEGRKPDK---------RAALLYGPPGVGKTSLVEAIASE 72 Query: 255 AGVPFFSISGSEF-----VEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 + ++ S++ +E VG ASR R +FK+ ++ +DE+D + Sbjct: 73 FNLEMIELNASDYRRRSDIERIVG-AASRKRSMFKRG-----VVILLDEVDGI 119
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 49.3 bits (116), Expect = 9e-06 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%) Frame = +3 Query: 156 RFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 335 R T + + +L+ GPPGTGKTL AK +A +G+ + ++G + M G + + Sbjct: 384 RNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHK 442 Query: 336 LFKKAK-ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 512 LF A ++FVDE DA +++ TLN L + + ++V Sbjct: 443 LFDWANTSRRGLLLFVDEADA--FLRKRATEKISEDLRATLNAFLYRTG--QHSNKFMLV 498 Query: 513 AATNRADILDSALLRPGRFDRQVSVDVP 596 A+N+ + D A+ R + V D+P Sbjct: 499 LASNQPEQFDWAI--NDRINEMVHFDLP 524
>RFCL_NANEQ (P60373) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 430 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 T D+V ++AKQ + V KK + K +LL GPPGTGKT A+A E Sbjct: 41 TLDEVENQEQAKQILRDYVINYKKKYK--------GKALLLYGPPGTGKTSSVYALANEL 92 Query: 258 GVPFFSISGSE-----FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 G ++ S+ + VG AS+ + LF K + I+ VDE+D + Sbjct: 93 GYEVLEVNASDERDAIHIHHIVG-EASKGKPLFHKGR-----IILVDEVDGL 138
>RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 486 Score = 48.9 bits (115), Expect = 1e-05 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Frame = +3 Query: 78 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 257 + +DVAG ++ KQ +E +E + +G + K +LL GPPG+GKT LA AIA + Sbjct: 12 SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63 Query: 258 GVPFFSISGS-----EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 398 ++ S + + VG A+ K+ ++ +DE+D + Sbjct: 64 AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL 109
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 48.5 bits (114), Expect = 2e-05 Identities = 20/37 (54%), Positives = 28/37 (75%) Frame = +3 Query: 501 IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 611 ++V+A TNR D+LD AL+RPGRF RQ+ P ++GR Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGR 37
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%) Frame = +3 Query: 90 VAGVDEAKQDFMEVV---EFLKKPERFTAVGARIPKG-VLLVGPPGTGKTLLAKAIAGEA 257 V G D+AK+ F+ V + + ++ + G I K +++VGP GTGKTLLA+ IA Sbjct: 77 VIGQDDAKR-FLSVAVYNHYKRLLQQEDSDGVEIEKSNIIMVGPTGTGKTLLARTIAKML 135 Query: 258 GVPFFSISGSEFVEM-FVGVGASRVRDLFKKA-----KENAPCIVFVDEIDAVXXXXXXX 419 VPF + + E +VG + +A K+ IVF+DEID + Sbjct: 136 HVPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVKQAERGIVFIDEIDKIARKSDNP 195 Query: 420 XXXXNDEREQTLNQLLTEMDG 482 + E LL ++G Sbjct: 196 SITRDVSGEGVQQGLLKLLEG 216
>HSLU_OCEIH (Q8CXH1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 465 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +3 Query: 180 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDLFKKA 350 +PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL + A Sbjct: 50 VPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVEMA 108
>Y1189_COXBU (P39918) Hypothetical protein CBU1189| Length = 440 Score = 47.8 bits (112), Expect = 3e-05 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 11/147 (7%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--ENAP 365 ++L GPPG+GKT LA+ IA +AG SIS V G +RD+ ++A+ + Sbjct: 47 MILWGPPGSGKTTLAEIIAQKAGARVESISA-------VLAGVKDIRDVVERAERHKGQA 99 Query: 366 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN------TGIIVVAATNR 527 I+FVDE+ ++ TL TE F+ N T + V+ Sbjct: 100 TILFVDEVHGFNKSQQDAFLPHVEKGTITLIGATTENPSFQLNNALLSRTRVYVLKQLTE 159 Query: 528 AD---ILDSALLRPGRFDRQVSVDVPD 599 AD IL++AL R + ++++P+ Sbjct: 160 ADLLSILENALANEERGLGKKALEIPE 186
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 47.8 bits (112), Expect = 3e-05 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%) Frame = +3 Query: 156 RFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 335 R T + + VL+ GPPGTGKTL AK +A +G+ + ++G + M G + + Sbjct: 335 RNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHK 393 Query: 336 LFKKAK-ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 512 +F A ++FVDE DA +++ TLN L + ++ ++V Sbjct: 394 VFDWASTSRRGLLLFVDEADA--FLRKRATEKISEDLRATLNAFLHRTG--QHSSKFMLV 449 Query: 513 AATNRADILDSALLRPGRFDRQVSVDVP 596 A+N+ + D A+ R D V +P Sbjct: 450 LASNQPEQFDWAI--NDRIDEMVCFALP 475
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 47.4 bits (111), Expect = 3e-05 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 15/136 (11%) Frame = +3 Query: 192 VLLVGPPGTGKTLLAKAIAGEAGVPFFS----------ISGSEFVEMFVGVG--ASRVRD 335 +LL GPPGTGKT L K +A + S S F + F G ++ D Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 336 LFKKAKENAPCIVFV--DEIDAVXXXXXXXXXXXN-DEREQTLNQLLTEMDGFEGNTGII 506 + E+ C+VFV DE++++ + + +N LLT++D ++ Sbjct: 235 QIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVL 294 Query: 507 VVAATNRADILDSALL 554 ++ +N LD AL+ Sbjct: 295 ILCTSNLESTLDKALV 310 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,936,477 Number of Sequences: 219361 Number of extensions: 1604610 Number of successful extensions: 11598 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 10077 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11080 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
