Clone Name | bah63o08 |
---|---|
Clone Library Name | barley_pub |
>RPE_ORYSA (Q9ZTP5) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 274 Score = 230 bits (586), Expect = 2e-60 Identities = 114/125 (91%), Positives = 123/125 (98%), Gaps = 1/125 (0%) Frame = +1 Query: 193 KLFQVKAS-RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 369 K F+V+AS RVDKFSK+DIIVSPSILSANF+KLGEQVKAVEVAGCDWIHVDVMDGRFVPN Sbjct: 33 KAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPN 92 Query: 370 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 549 ITIGPL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCEQ++TIHLHRTV+ Sbjct: 93 ITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVN 152 Query: 550 QIKSL 564 QIKSL Sbjct: 153 QIKSL 157
>RPE_SPIOL (Q43157) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) Length = 285 Score = 225 bits (573), Expect = 8e-59 Identities = 113/121 (93%), Positives = 118/121 (97%), Gaps = 1/121 (0%) Frame = +1 Query: 205 VKA-SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIG 381 VKA SRVDKFSKSDIIVSPSILSANFAKLGEQVKAVE+AGCDWIHVDVMDGRFVPNITIG Sbjct: 48 VKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIG 107 Query: 382 PLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKS 561 PL+VDALRPVTDLPLDVHLMIVEPEQR+PDFIKAGADIVSVHCE +TIHLHRTV+QIKS Sbjct: 108 PLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKS 167 Query: 562 L 564 L Sbjct: 168 L 168
>RPE_SOLTU (Q43843) Ribulose-phosphate 3-epimerase, chloroplast precursor (EC| 5.1.3.1) (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) (R5P3E) (Fragment) Length = 280 Score = 222 bits (566), Expect = 5e-58 Identities = 105/118 (88%), Positives = 117/118 (99%) Frame = +1 Query: 211 ASRVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLI 390 +SRVDKFSKSDIIVSPSILSANF+KLGEQVKA+E AGCDWIHVDVMDGRFVPNITIGPL+ Sbjct: 46 SSRVDKFSKSDIIVSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLV 105 Query: 391 VDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSL 564 VD+LRP+TDLPLDVHLMIVEP+QR+PDFIKAGADIVSVHCEQ++TIHLHRT++QIKSL Sbjct: 106 VDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSL 163
>RPE_SYNY3 (P74061) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 162 bits (410), Expect = 6e-40 Identities = 77/108 (71%), Positives = 94/108 (87%) Frame = +1 Query: 241 DIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDL 420 +I+V+PSILSA+F++LGE++KAV+ AG DWIHVDVMDGRFVPNITIGPLIVDA+RP+T Sbjct: 3 NIVVAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKK 62 Query: 421 PLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSL 564 LDVHLMIVEPE+ + DF KAGADI+SVH E A+ HLHRT+ QI+ L Sbjct: 63 TLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIREL 110
>RPE_BACSU (O34557) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 144 bits (364), Expect = 1e-34 Identities = 74/105 (70%), Positives = 85/105 (80%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I V+PSILSA+FA LG ++K VE G D IH+DVMDG FVPNITIGPLIV+A+RPVTDLP Sbjct: 2 IKVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLP 61 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 LDVHLMI EP++ IP F KAGADI+SVH E A HLHRT+ IK Sbjct: 62 LDVHLMIEEPDRYIPAFAKAGADILSVHAE--ACPHLHRTIQLIK 104
>RPEC_RALEU (P40117) Ribulose-phosphate 3-epimerase, chromosomal (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 115 bits (287), Expect = 1e-25 Identities = 56/109 (51%), Positives = 80/109 (73%) Frame = +1 Query: 232 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 411 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +VPN+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVPNLTIGPLVCEAIRPL 71 Query: 412 TDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +P+DVHLM+ + IP F KAGA+I+S H E A+ H+ RT+ I+ Sbjct: 72 VSIPIDVHLMVEPVDALIPLFAKAGANIISFHPE--ASRHVDRTIGLIR 118
>RPEP_RALEU (Q04539) Ribulose-phosphate 3-epimerase, plasmid (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 241 Score = 111 bits (278), Expect = 1e-24 Identities = 54/109 (49%), Positives = 79/109 (72%) Frame = +1 Query: 232 SKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV 411 S+ I ++PSILSA+FA+LGE+V A+E G D +H DVMD +V N+TIGPL+ +A+RP+ Sbjct: 12 SQRAIRLAPSILSADFARLGEEVCAIEAGGADLVHFDVMDNHYVSNLTIGPLVCEAIRPL 71 Query: 412 TDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +P+DVHLM+ + IP F KAGA+++S H E A+ H+ RT+ I+ Sbjct: 72 VSIPIDVHLMVEPVDALIPMFAKAGANLISFHPE--ASRHVDRTIGLIR 118
>RPE_RHOCA (P51012) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 105 bits (261), Expect = 1e-22 Identities = 51/106 (48%), Positives = 71/106 (66%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I ++PSILSA+FA G +++A+E G DW+HVDVMDG FVPN+T GP V A R Sbjct: 7 IKIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTV 66 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKS 561 +DVHLMI + I + +AGAD+++ H E A H+HRT+ I++ Sbjct: 67 MDVHLMISPVDAYIDAYAQAGADVLTAHVE--AGPHIHRTLQAIRA 110
>RPE_STRCO (Q9L0Z5) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 102 bits (254), Expect = 8e-22 Identities = 48/91 (52%), Positives = 66/91 (72%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G +V++L TD PLD Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLD 62 Query: 430 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTA 522 HLMI P++ P +++AGA V+ H E A Sbjct: 63 CHLMIEAPDRWAPQYVEAGAGSVTFHAEAAA 93
>RPE_BUCAI (P57603) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 102 bits (254), Expect = 8e-22 Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 1/104 (0%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 426 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+I+++LR P+ Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPI 65 Query: 427 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 DVHLM+ + IP F KAGA ++ H E AT+H+ RT++ IK Sbjct: 66 DVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIK 107
>RPE_BUCAP (Q8K940) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 101 bits (252), Expect = 1e-21 Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 1/104 (0%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT-DLPL 426 ++ SILSA+FA+LGE K AG DWIH DVMD +VPN+T+GP+I+ ALR +P+ Sbjct: 6 LASSILSADFARLGEDTKKAIDAGSDWIHFDVMDNHYVPNLTMGPMILKALRNYNITVPI 65 Query: 427 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 DVHLM+ + IP F +AGAD ++ H E +T H+ RT++ IK Sbjct: 66 DVHLMVKPVDNLIPQFAEAGADFITFHPE--STDHIDRTLNLIK 107
>RPE_SERMA (P45455) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 210 Score = 101 bits (251), Expect = 2e-21 Identities = 52/105 (49%), Positives = 72/105 (68%), Gaps = 1/105 (0%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP++ +ALR P Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM+ ++ +PDF KAGA +S H E A+ H+ RT+ IK Sbjct: 65 IDVHLMVKPVDRIVPDFAKAGASYISFHPE--ASEHVDRTIQLIK 107
>RPE_TREPA (O66107) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 218 Score = 101 bits (251), Expect = 2e-21 Identities = 47/103 (45%), Positives = 67/103 (65%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G ++ LR T LP D Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFD 66 Query: 430 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 VHLM+ P I DF++AGAD ++ H E A +H HR + I+ Sbjct: 67 VHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIR 107
>RPE_AQUAE (O67098) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 222 Score = 100 bits (249), Expect = 3e-21 Identities = 50/106 (47%), Positives = 71/106 (66%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+ ++ +GEQ++A G D +H DVMDG FVPNIT G I+ +R LP+ Sbjct: 3 LLAPSILAGDWWCIGEQIQATIRGGADILHYDVMDGHFVPNITAGYEILSHIRKRASLPI 62 Query: 427 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSL 564 D HLMI P++ IP F++AGA+ +SVH E H+HRT+ IK L Sbjct: 63 DAHLMIENPDKYIPKFVEAGANWISVHIEN--NYHIHRTLQLIKEL 106
>RPE_MYCTU (P65760) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 99.8 bits (247), Expect = 5e-21 Identities = 47/91 (51%), Positives = 67/91 (73%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 427 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D HLMI P++ P + +AGA V+ H E T Sbjct: 67 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEAT 97
>RPE_MYCBO (P65761) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 99.8 bits (247), Expect = 5e-21 Identities = 47/91 (51%), Positives = 67/91 (73%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG +V++L VTD+P+ Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPM 66 Query: 427 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D HLMI P++ P + +AGA V+ H E T Sbjct: 67 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEAT 97
>RPE_CHLTR (O84123) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 233 Score = 97.4 bits (241), Expect = 2e-20 Identities = 47/104 (45%), Positives = 67/104 (64%) Frame = +1 Query: 217 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVD 396 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP +V Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVA 61 Query: 397 ALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATI 528 A+ T+L L+VH MI P + + F+KAGAD + VH E I Sbjct: 62 AINRSTELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENI 105
>RPE_SHIFL (P0AG10) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 97.4 bits (241), Expect = 2e-20 Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIK 107
>RPE_ECOLI (P0AG07) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 97.4 bits (241), Expect = 2e-20 Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIK 107
>RPE_ECOL6 (P0AG08) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 97.4 bits (241), Expect = 2e-20 Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIK 107
>RPE_ECO57 (P0AG09) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 97.4 bits (241), Expect = 2e-20 Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+++ +LR P Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM+ ++ +PDF AGA I++ H E A+ H+ RT+ IK Sbjct: 65 IDVHLMVKPVDRIVPDFAAAGASIITFHPE--ASEHVDRTLQLIK 107
>RPE_CHLMU (Q9PKR7) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 95.9 bits (237), Expect = 7e-20 Identities = 49/108 (45%), Positives = 71/108 (65%) Frame = +1 Query: 235 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 414 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG FVPNIT GP I+ A+ T Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRST 62 Query: 415 DLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 DL L+VH MI P + + F+KAGAD + VH E A +L +D I+ Sbjct: 63 DLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFE--AAENLKEILDYIR 108
>RPE_CHLPN (Q9Z8Z9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 229 Score = 95.1 bits (235), Expect = 1e-19 Identities = 45/98 (45%), Positives = 65/98 (66%) Frame = +1 Query: 235 KSDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVT 414 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG FVPN+T GP I+ A+ T Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRST 63 Query: 415 DLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATI 528 DL L+VH MI P + I F+++GAD + VH E + I Sbjct: 64 DLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDI 101
>RPE_MYCLE (Q9CCP9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 94.0 bits (232), Expect = 3e-19 Identities = 45/91 (49%), Positives = 65/91 (71%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPL 426 +++PSIL+A+FA+L ++ A VA DW+HVDVMDG FVPN+TIG +V +L +D+P+ Sbjct: 4 LIAPSILAADFARLTDE--AAVVASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPM 61 Query: 427 DVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D HLMI P++ P + +AGA V+ H E T Sbjct: 62 DCHLMIDNPDRWAPPYAEAGAYNVTFHAEAT 92
>RPE_RHORU (P51013) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 225 Score = 93.2 bits (230), Expect = 5e-19 Identities = 48/105 (45%), Positives = 69/105 (65%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPL+ ALRP T LP Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM + I F +AGAD+++ H E A+ H+HR+V I+ Sbjct: 65 IDVHLMTRPVDPLIDSFAEAGADMITFHPE--ASDHVHRSVQMIR 107
>RPE_HAEIN (P44756) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 224 Score = 93.2 bits (230), Expect = 5e-19 Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 1/105 (0%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV-TDLP 423 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP + ALR P Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAP 64 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 +DVHLM+ ++ IPDF KAGA+ ++ H E + H+ R++ I+ Sbjct: 65 IDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIR 107
>RPE_YEAST (P46969) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 238 Score = 87.8 bits (216), Expect = 2e-17 Identities = 48/114 (42%), Positives = 66/114 (57%), Gaps = 14/114 (12%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 423 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G IV +LR P Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPG 64 Query: 424 ------------LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTA-TIHLHRTV 546 D H+M+ PE+ + DF K GAD + H E T +HL + + Sbjct: 65 DASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHLVKLI 118
>RPE_HELPJ (Q9ZJ75) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 85.5 bits (210), Expect = 1e-16 Identities = 43/104 (41%), Positives = 68/104 (65%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP+I++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLD 60 Query: 430 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKS 561 VHLM+ + F I+S+H E H HR + IKS Sbjct: 61 VHLMVENASFFVELFAPLNPQIISIHAENEK--HPHRVLQLIKS 102
>RPE_SCHPO (O14105) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 228 Score = 85.1 bits (209), Expect = 1e-16 Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 3/93 (3%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALR---PVTDL 420 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP++V A+R + Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEA 65 Query: 421 PLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D HLM++EPE+ I AGA + H E T Sbjct: 66 FFDCHLMVIEPERYIDQLADAGASLFCFHYEAT 98
>RPE_CANGA (Q6FL81) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 246 Score = 84.7 bits (208), Expect = 2e-16 Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 16/107 (14%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP- 423 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G IV +LR Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQ 64 Query: 424 ---------------LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D H+M+ EPE+ + DF KAGAD + H E T Sbjct: 65 EEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYEAT 111
>RPE_ASHGO (Q755M2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 239 Score = 83.6 bits (205), Expect = 4e-16 Identities = 45/102 (44%), Positives = 63/102 (61%), Gaps = 11/102 (10%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV----- 411 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP IV +LR Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVG 64 Query: 412 ---TDLP---LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 +D P D H+M+ EPE+ + F++ GAD + H E T Sbjct: 65 DKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYEAT 106
>RPE_HELPY (P56188) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 217 Score = 83.2 bits (204), Expect = 5e-16 Identities = 42/105 (40%), Positives = 68/105 (64%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP++++ + ++ +PLD Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLD 60 Query: 430 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSL 564 VHLM+ F I+S+H E H HR + IK+L Sbjct: 61 VHLMVENASFFAELFAPLKPQIISIHAENEK--HPHRVLQLIKNL 103
>ALSE_ECOLI (P32719) D-allulose-6-phosphate 3-epimerase (EC 5.1.3.-)| Length = 231 Score = 82.8 bits (203), Expect = 6e-16 Identities = 37/103 (35%), Positives = 63/103 (61%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLD 61 Query: 430 VHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIK 558 HLM+ P+ I +AGAD +++H E T R +D+I+ Sbjct: 62 CHLMVTRPQDYIAQLARAGADFITLHPE-TINGQAFRLIDEIR 103
>RPE1_ORYSA (Q9SE42) Ribulose-phosphate 3-epimerase, cytoplasmic isoform (EC| 5.1.3.1) (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) Length = 228 Score = 82.4 bits (202), Expect = 8e-16 Identities = 37/88 (42%), Positives = 54/88 (61%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLD 429 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG ++ +LR T LD Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLD 68 Query: 430 VHLMIVEPEQRIPDFIKAGADIVSVHCE 513 HLM+ P + KAGA + H E Sbjct: 69 CHLMVTNPSDYVEPLAKAGASGFTFHIE 96
>RPE_BUCBP (Q89A59) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 228 Score = 81.3 bits (199), Expect = 2e-15 Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 3/108 (2%) Frame = +1 Query: 247 IVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV---TD 417 ++S S+LSANF++LGE + V +G D IH DVMD +V N+T GP+++++LR V Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKS 64 Query: 418 LPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKS 561 + +DVHLM + I F K +I+S H E T + +T+ IKS Sbjct: 65 MVIDVHLMTCPVDDLIIKFAKLDVNIISFHPESTNNV--EKTIKLIKS 110
>RPE_METJA (Q58093) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) Length = 234 Score = 77.8 bits (190), Expect = 2e-14 Identities = 43/107 (40%), Positives = 68/107 (63%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 I + SILSA+F L E++K E AG D+ HVD+MDG FVPNI++G I ++ +T+LP Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELP 61 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVDQIKSL 564 ++VHLM+ + + +F + D ++ H E A R +++IKS+ Sbjct: 62 VEVHLMVENVDLFVNEFEE--MDYITFHIE--AVKFPFRIINRIKSI 104
>RPE_PONPY (Q5R5Y2) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 74.3 bits (181), Expect = 2e-13 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 2/92 (2%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 423 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D+H+M+ +PEQ + AGA+ + H E T Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYAFHLEAT 98
>RPE_HUMAN (Q96AT9) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-3-epimerase) Length = 228 Score = 74.3 bits (181), Expect = 2e-13 Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 2/92 (2%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 423 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D+H+M+ +PEQ + AGA+ + H E T Sbjct: 67 FDMHMMVSKPEQWVKPMAVAGANQYTFHLEAT 98
>RPE_MOUSE (Q8VEE0) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Ribulose-5-phosphate-epimerase) Length = 228 Score = 73.9 bits (180), Expect = 3e-13 Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 2/92 (2%) Frame = +1 Query: 250 VSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPV--TDLP 423 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G +V++LR D Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPF 66 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCEQT 519 D+H+M+ PEQ + AGA+ + H E T Sbjct: 67 FDMHMMVSRPEQWVKPMAVAGANQYTFHLEAT 98
>RPE_ENCCU (Q8SRP6) Ribulose-phosphate 3-epimerase (EC 5.1.3.1)| (Pentose-5-phosphate 3-epimerase) (PPE) (RPE) Length = 217 Score = 56.2 bits (134), Expect = 6e-08 Identities = 32/85 (37%), Positives = 45/85 (52%) Frame = +1 Query: 259 SILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVHL 438 SIL NF L E++ ++ G IH+DVMD FV NIT GP I++ + D DVH+ Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHM 71 Query: 439 MIVEPEQRIPDFIKAGADIVSVHCE 513 M+ P I +V++H E Sbjct: 72 MVESPLDIIMQIDLERVSLVTIHSE 96
>SGCE_ECOLI (P39362) Protein sgcE (EC 5.1.3.-)| Length = 210 Score = 49.3 bits (116), Expect = 8e-06 Identities = 27/90 (30%), Positives = 44/90 (48%) Frame = +1 Query: 244 IIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLP 423 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T P Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHP 60 Query: 424 LDVHLMIVEPEQRIPDFIKAGADIVSVHCE 513 L H M+ P++ + + VH E Sbjct: 61 LSFHFMLARPQRWFNALAEIRPAWIFVHAE 90
>HIS4_RHORT (Q2RNA6) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 33.5 bits (75), Expect = 0.43 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 292 EQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDV 432 +Q A +AGC WIHV ++G F P V+A+ DLP+ + Sbjct: 34 DQAAAFALAGCRWIHVVDLNGAFAGRPVNAP-AVEAILAAVDLPVQL 79
>NU4M_HIPAM (Q9ZZY2) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 30.8 bits (68), Expect = 2.8 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -3 Query: 417 ISHWTQSINNQWSNCDIWHKAPIHDINMNPVTSCHL 310 + +WTQ+++N WSN +W + + P+ HL Sbjct: 179 LQYWTQAVSNSWSNVFLWLACMMAFMVKMPLYGLHL 214
>RPOD_LEPIN (P59117) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 211 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 348 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>RPOD_LEPIC (P61540) RNA polymerase sigma factor rpoD| Length = 585 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = +1 Query: 211 ASRVDKFSK--SDIIVSPSILSANFAKLGEQVKAVEVAGCDWIHVDVM 348 A R++K K + I+S SIL AN+ KL ++++ ++ D I VD M Sbjct: 119 AKRIEKGEKIIEETILSSSILRANYIKLLPKIRSKKIKVYDLIRVDKM 166
>SPB1_CRYNE (Q5KM86) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 908 Score = 30.4 bits (67), Expect = 3.6 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 388 IVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLH 537 + + P L + V L ++P + F+ ADI + HC QT H+H Sbjct: 62 VAEKYMPKGSLIIGVDLNAIKPLPHVTTFV---ADITTPHCRQTLRQHMH 108
>HKR1_YEAST (P41809) Hansenula MRAKII killer toxin-resistant protein 1 precursor| Length = 1802 Score = 30.4 bits (67), Expect = 3.6 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%) Frame = -1 Query: 524 VAVCSQWTLTISAPALIKSGIRCSGSTIIRCTSNGRS-------VTGRRASTINGPIVIF 366 VAV S +T + SAPA I S S S + +S S ++ S+ + P+ + Sbjct: 708 VAVSSTYTSSPSAPAAISSTYTSSPSAPVAVSSTYTSSPSAPAAISSTYTSSPSAPVAVS 767 Query: 365 GTKRPSMTST*IQSHPATSTAFTCSPSLAKFAERMEGDT 249 T S ++ + S +TS+ + S + FA G T Sbjct: 768 STYTSSPSALVVLSSTSTSSPYDIVYSPSTFAAISSGYT 806
>LEU12_METAC (Q8THA5) 2-isopropylmalate synthase 2 (EC 2.3.3.13)| (Alpha-isopropylmalate synthase 2) (Alpha-IPM synthetase 2) Length = 515 Score = 30.0 bits (66), Expect = 4.8 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = +1 Query: 280 AKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLIVDALRPVTDLPLDVH 435 A L E KAV+ AGCD I+V G VP+ + I D +T +P+DVH Sbjct: 160 AYLIEVFKAVQEAGCDIINVPDTVGVMVPS-AMYRQIKDIAAEIT-IPIDVH 209
>AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 410 Score = 29.6 bits (65), Expect = 6.2 Identities = 18/62 (29%), Positives = 29/62 (46%) Frame = -1 Query: 482 ALIKSGIRCSGSTIIRCTSNGRSVTGRRASTINGPIVIFGTKRPSMTST*IQSHPATSTA 303 A++ +G+R SG TI+ + R T R + P+ + GT+ + PAT Sbjct: 155 AVLLAGLRASGRTIVIEPAKSRDHTERMLKNLGVPVEVEGTR--------VVLEPATFRG 206 Query: 302 FT 297 FT Sbjct: 207 FT 208
>GLYA_PELCD (Q3A4L9) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 416 Score = 29.6 bits (65), Expect = 6.2 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 19/107 (17%) Frame = -1 Query: 494 ISAPALIKSGIRC-SGST---IIRCTSNGRSVTGRRAS--------TINGPIVIFGTKRP 351 + A AL+K G+ SG T +I G TG+ A T+N V F T+ P Sbjct: 292 VLADALVKRGLNLVSGGTDNHLILVDFTGTETTGKMAEKALEKAGITVNKNSVPFETRSP 351 Query: 350 SMTST*IQSHPATSTAFTCSPSLAKFA-------ERMEGDTMMSLLE 231 +TS PAT+T + + A + ME DT ++ ++ Sbjct: 352 FVTSGIRLGTPATTTRGLKEAEMERVADWVVRALDNMENDTELAAIK 398
>PDXJ_AQUAE (O67417) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 242 Score = 29.6 bits (65), Expect = 6.2 Identities = 12/63 (19%), Positives = 33/63 (52%) Frame = +1 Query: 370 ITIGPLIVDALRPVTDLPLDVHLMIVEPEQRIPDFIKAGADIVSVHCEQTATIHLHRTVD 549 +++ + + L+P+ + ++V L I +++I ++ GAD + +H + A + + Sbjct: 107 VSLKEKLKEYLKPIKEAGIEVSLFIEAQKEQIDASVEVGADAIEIHTGRYANLWNEHRFE 166 Query: 550 QIK 558 + K Sbjct: 167 EAK 169
>NU4M_CANFA (Q9ZZ58) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH| dehydrogenase subunit 4) Length = 459 Score = 29.3 bits (64), Expect = 8.1 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = -3 Query: 462 SLLRFHNHQMHIQW-KISHWTQSINNQWSNCDIWHKAPIHDINMNPVTSCHL 310 +LL HN + + I +W Q + N WSN +W + + P+ HL Sbjct: 163 ALLYIHNFMGSLNFLMIQYWIQPLPNSWSNIFLWLACMMAFMVKMPLYGLHL 214
>HIS4_RHOS4 (P50936) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 239 Score = 29.3 bits (64), Expect = 8.1 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +1 Query: 295 QVKAVEVAGCDWIHVDVMDGRF 360 Q A E AGC+W+H+ ++G F Sbjct: 35 QAAAFEAAGCEWVHLVDLNGAF 56
>YIP2_YEAST (P40455) Hypothetical 27.2 kDa protein in IMP2-DNA43 intergenic| region Length = 235 Score = 29.3 bits (64), Expect = 8.1 Identities = 25/94 (26%), Positives = 41/94 (43%) Frame = -2 Query: 496 QYQHLP**NLEFAAQVPQSSDAHPMEDQSLDAEHQQSMVQL*YLAQSAHP*HQHESSHIL 317 Q QH P +L + P HP++ QS ++ + S P QH+ +H+ Sbjct: 17 QQQHPPGQSLSSISWSPTRRPHHPLKQQSTNSFSEI------LSKSSVQPNVQHDGNHM- 69 Query: 316 PPQQLLPVRQAWQSLQREWKGTQ*CRSWRTCRPL 215 P LL ++Q Q++ + Q RS + PL Sbjct: 70 -PISLLVLKQEHHKQQQQQQQRQNIRSQNSTPPL 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,284,554 Number of Sequences: 219361 Number of extensions: 1266350 Number of successful extensions: 4247 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 4107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4220 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)