Clone Information

BLAST Search Result

Clone Name	bah63o02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NFYB3_ARATH (O23310) Nuclear transcription factor Y subunit B-3 ...	206	2e-53
2	NFYB2_ARATH (Q9FGJ3) Nuclear transcription factor Y subunit B-2 ...	196	2e-50
3	NFYB3_ORYSA (Q60EQ4) Nuclear transcription factor Y subunit B-3 ...	181	1e-45
4	NFYB_MAIZE (P25209) Nuclear transcription factor Y subunit B (NF...	178	7e-45
5	NFYB7_ARATH (Q9SIT9) Nuclear transcription factor Y subunit B-7 ...	175	8e-44
6	NFYB8_ARATH (Q8VYK4) Nuclear transcription factor Y subunit B-8 ...	174	1e-43
7	NFYB1_ARATH (Q9SLG0) Nuclear transcription factor Y subunit B-1 ...	174	1e-43
8	NFYBA_ARATH (Q67XJ2) Nuclear transcription factor Y subunit B-10...	172	5e-43
9	NFYB2_ORYSA (Q5QMG3) Nuclear transcription factor Y subunit B-2 ...	172	7e-43
10	NFYB4_ORYSA (Q65XK1) Nuclear transcription factor Y subunit B-4 ...	159	3e-39
11	NFYB6_ARATH (Q84W66) Nuclear transcription factor Y subunit B-6 ...	159	3e-39
12	NFYB5_ARATH (O82248) Nuclear transcription factor Y subunit B-5 ...	159	6e-39
13	NFYB_CHICK (P25207) Nuclear transcription factor Y subunit beta ...	152	7e-37
14	NFYB_RAT (P63140) Nuclear transcription factor Y subunit beta (N...	152	7e-37
15	NFYB_MOUSE (P63139) Nuclear transcription factor Y subunit beta ...	152	7e-37
16	NFYB_HUMAN (P25208) Nuclear transcription factor Y subunit beta ...	152	7e-37
17	NFYB_HORSE (Q6RG77) Nuclear transcription factor Y subunit beta ...	152	7e-37
18	NFYB_PETMA (P25210) Nuclear transcription factor Y subunit beta ...	144	1e-34
19	NFYB9_ARATH (Q9SFD8) Nuclear transcription factor Y subunit B-9 ...	139	5e-33
20	NFYB4_ARATH (O04027) Nuclear transcription factor Y subunit B-4 ...	133	3e-31
21	HAP3_YEAST (P13434) Transcriptional activator HAP3 (UAS2 regulat...	130	2e-30
22	HAP3_SCHPO (P36611) Transcriptional activator hap3	126	4e-29
23	HAP3_KLULA (P40914) Transcriptional activator HAP3	125	9e-29
24	NFYB_XENLA (P25211) Nuclear transcription factor Y subunit beta ...	105	6e-23
25	NFYB1_ORYSA (Q6Z348) Nuclear transcription factor Y subunit B-1 ...	84	2e-16
26	NC2B_DROME (Q9VJQ5) Negative cofactor 2 beta (dNC2) (Down-regula...	70	5e-12
27	DR1_ARATH (P49592) Dr1 protein homolog	69	8e-12
28	DPOE3_RAT (Q642A5) DNA polymerase epsilon subunit 3 (EC 2.7.7.7)...	67	2e-11
29	DPOE3_PONPY (Q5R4W3) DNA polymerase epsilon subunit 3 (EC 2.7.7....	67	2e-11
30	DPOE3_HUMAN (Q9NRF9) DNA polymerase epsilon subunit 3 (EC 2.7.7....	67	2e-11
31	TBAP_RAT (Q5XI68) TATA-binding protein-associated phosphoprotein...	67	4e-11
32	TBAP_MOUSE (Q91WV0) TATA-binding protein-associated phosphoprote...	67	4e-11
33	TBAP_HUMAN (Q01658) TATA-binding protein-associated phosphoprote...	67	4e-11
34	TBAP_CHICK (Q5ZMV3) TATA-binding protein-associated phosphoprote...	67	4e-11
35	DPOE3_MOUSE (Q9JKP7) DNA polymerase epsilon subunit 3 (EC 2.7.7....	67	4e-11
36	DPB4_SCHPO (P87174) DNA polymerase epsilon subunit D (EC 2.7.7.7...	44	2e-04
37	DPB4_YARLI (Q6CHS6) DNA polymerase epsilon subunit D (EC 2.7.7.7...	41	0.002
38	HAF1_ARCFU (O29910) Probable archaeal histone A1-1	40	0.005
39	DPB4_DEBHA (Q6BIP4) DNA polymerase epsilon subunit D (EC 2.7.7.7...	37	0.033
40	HMT1_METTH (P50483) DNA-binding protein HMt-1.1 (Archaeal histon...	37	0.043
41	HAF2_ARCFU (O28779) Probable archaeal histone A1-2	36	0.056
42	HFO2_METFO (P48783) Archaeal histone A2	35	0.096
43	HFO1_METFO (P48782) Archaeal histone A1	35	0.16
44	HMFB_METFE (P19267) DNA-binding protein HMf-2 (Archaeal histone B)	34	0.21
45	HFOB_METFO (P48784) Archaeal histone B	34	0.21
46	HMT2_METTH (O27731) DNA-binding protein HMt-1.2 (Archaeal histon...	34	0.28
47	HMFA_METFE (P48781) DNA-binding protein HMf-1 (Archaeal histone A)	33	0.47
48	H2B2_LYTPI (P06146) Histone H2B.2, sperm	32	0.81
49	DPB4_ASHGO (Q750A4) DNA polymerase epsilon subunit D (EC 2.7.7.7...	32	1.4
50	CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel al...	31	1.8
51	CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alph...	31	1.8
52	CAC1E_HUMAN (Q15878) Voltage-dependent R-type calcium channel al...	31	1.8
53	CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel al...	31	1.8
54	DPB4_YEAST (Q04603) DNA polymerase epsilon subunit D (EC 2.7.7.7...	31	2.4
55	DPB4_CANGA (Q6FXD0) DNA polymerase epsilon subunit D (EC 2.7.7.7...	31	2.4
56	C11B1_PAPHU (Q29527) Cytochrome P450 11B1, mitochondrial precurs...	30	3.1
57	CXA8_MOUSE (P28236) Gap junction alpha-8 protein (Connexin-50) (...	30	4.0
58	H2A_ENCCU (Q8SSG3) Histone H2A	30	4.0
59	DGKG_RAT (P49620) Diacylglycerol kinase gamma (EC 2.7.1.107) (Di...	30	5.3
60	LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 prote...	29	6.9
61	FZD6_HUMAN (O60353) Frizzled 6 precursor (Frizzled-6) (Fz-6) (hFz6)	29	9.0
62	CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel al...	29	9.0
63	FZD6_CANFA (Q8WMU5) Frizzled 6 precursor (Frizzled-6) (Fz-6)	29	9.0

>NFYB3_ARATH (O23310) Nuclear transcription factor Y subunit B-3 (AtNF-YB-3)|
           (Transcriptional activator HAP3C)
          Length = 161

 Score =  206 bits (525), Expect = 2e-53
 Identities = 102/120 (85%), Positives = 109/120 (90%)
 Frame = +3

Query: 159 MPDSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 338
           M DSDNDSGG  +   +S +EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF
Sbjct: 1   MADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 60

Query: 339 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGAG 518
           ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDY+EPLK+YL K+RE+EGEK   AG
Sbjct: 61  ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAG 120

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>NFYB2_ARATH (Q9FGJ3) Nuclear transcription factor Y subunit B-2 (AtNF-YB-2)|
           (Transcriptional activator HAP3B)
          Length = 190

 Score =  196 bits (499), Expect = 2e-50
 Identities = 97/121 (80%), Positives = 107/121 (88%), Gaps = 6/121 (4%)
 Frame = +3

Query: 159 MPDSDNDSGGPSNADFS------SPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQ 320
           M DSD DSGG  N +        SP+EQDRFLPIANVSRIMKKALPANAKISKDAKET+Q
Sbjct: 1   MGDSDRDSGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQ 60

Query: 321 ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGE 500
           ECVSEFISF+TGEASDKCQ+EKRKTINGDDLLWAMTTLGFEDY+EPLK+YL +FRE+EGE
Sbjct: 61  ECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGE 120

Query: 501 K 503
           +
Sbjct: 121 R 121

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>NFYB3_ORYSA (Q60EQ4) Nuclear transcription factor Y subunit B-3 (OsNF-YB-3)|
           (Transcriptional activator HAP3B)
          Length = 185

 Score =  181 bits (458), Expect = 1e-45
 Identities = 87/114 (76%), Positives = 97/114 (85%)
 Frame = +3

Query: 183 GGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEA 362
           GG         +EQDRFLPIAN+SRIMKKA+PAN KI+KDAKETVQECVSEFISFIT EA
Sbjct: 26  GGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEA 85

Query: 363 SDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGAGAG 524
           SDKCQREKRKTINGDDLLWAM TLGFEDY+EPLK+YL K+RE+EG+  + A AG
Sbjct: 86  SDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAG 139

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>NFYB_MAIZE (P25209) Nuclear transcription factor Y subunit B (NF-YB) (CAAT-box|
           DNA-binding protein subunit B)
          Length = 179

 Score =  178 bits (452), Expect = 7e-45
 Identities = 87/115 (75%), Positives = 99/115 (86%), Gaps = 1/115 (0%)
 Frame = +3

Query: 174 NDSGGP-SNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFI 350
           ++SG P       S +EQDRFLPIAN+SRIMKKA+PAN KI+KDAKETVQECVSEFISFI
Sbjct: 15  HESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFI 74

Query: 351 TGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGA 515
           T EASDKCQREKRKTINGDDLLWAM TLGFEDY+EPLK+YL K+RE+EG+  + A
Sbjct: 75  TSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTA 129

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>NFYB7_ARATH (Q9SIT9) Nuclear transcription factor Y subunit B-7 (AtNF-YB-7)|
          Length = 215

 Score =  175 bits (443), Expect = 8e-44
 Identities = 85/115 (73%), Positives = 99/115 (86%), Gaps = 3/115 (2%)
 Frame = +3

Query: 168 SDNDSGGPS---NADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 338
           ++ + G PS   N + ++ KEQDRFLPIANV RIMKK LP N KISKDAKETVQECVSEF
Sbjct: 16  AETNPGSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEF 75

Query: 339 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           ISF+TGEASDKCQREKRKTINGDD++WA+TTLGFEDY+ PLK+YL K+R+ EGEK
Sbjct: 76  ISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK 130

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>NFYB8_ARATH (Q8VYK4) Nuclear transcription factor Y subunit B-8 (AtNF-YB-8)|
          Length = 173

 Score =  174 bits (441), Expect = 1e-43
 Identities = 84/117 (71%), Positives = 97/117 (82%)
 Frame = +3

Query: 174 NDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFIT 353
           ++SGG  +      +EQDRFLPIAN+SRIMK+ LPAN KI+KDAKE VQECVSEFISF+T
Sbjct: 15  HESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVT 74

Query: 354 GEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGAGAG 524
            EASDKCQREKRKTINGDDLLWAM TLGFEDYMEPLK+YL ++RE+EG+    A  G
Sbjct: 75  SEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGG 131

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>NFYB1_ARATH (Q9SLG0) Nuclear transcription factor Y subunit B-1 (AtNF-YB-1)|
           (Transcriptional activator HAP3A)
          Length = 141

 Score =  174 bits (441), Expect = 1e-43
 Identities = 82/114 (71%), Positives = 95/114 (83%)
 Frame = +3

Query: 159 MPDSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEF 338
           M D+ +   G       S +EQDR+LPIAN+SRIMKKALP N KI KDAK+TVQECVSEF
Sbjct: 1   MADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEF 60

Query: 339 ISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGE 500
           ISFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFEDY+EPLK+YL ++RELEG+
Sbjct: 61  ISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGD 114

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>NFYBA_ARATH (Q67XJ2) Nuclear transcription factor Y subunit B-10 (AtNF-YB-10)|
          Length = 176

 Score =  172 bits (436), Expect = 5e-43
 Identities = 82/117 (70%), Positives = 100/117 (85%)
 Frame = +3

Query: 174 NDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFIT 353
           ++SGG  +    + +EQDRFLPIAN+SRIMK+ LP N KI+KDAKET+QECVSEFISF+T
Sbjct: 14  HESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVT 73

Query: 354 GEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGAGAG 524
            EASDKCQREKRKTINGDDLLWAM TLGFEDY++PLK+YL ++RE+EG+   G+G G
Sbjct: 74  SEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTK-GSGKG 129

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>NFYB2_ORYSA (Q5QMG3) Nuclear transcription factor Y subunit B-2 (OsNF-YB-2)|
           (Transcriptional activator HAP3A)
          Length = 178

 Score =  172 bits (435), Expect = 7e-43
 Identities = 84/124 (67%), Positives = 105/124 (84%), Gaps = 1/124 (0%)
 Frame = +3

Query: 156 GMPDSDND-SGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 332
           GM D+ +D SG P  +     +EQDRFLPIAN+SRIMKKA+PAN KI+KDAKET+QECVS
Sbjct: 14  GMADAGHDESGSPPRS--GGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVS 71

Query: 333 EFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIG 512
           EFISF+T EASDKCQ+EKRKTING+DLL+AM TLGFE+Y++PLK+YLHK+RE+ G+  + 
Sbjct: 72  EFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREVIGDSKLS 131

Query: 513 AGAG 524
           + AG
Sbjct: 132 SKAG 135

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>NFYB4_ORYSA (Q65XK1) Nuclear transcription factor Y subunit B-4 (OsNF-YB-4)|
           (Transcriptional activator HAP3C)
          Length = 143

 Score =  159 bits (403), Expect = 3e-39
 Identities = 77/115 (66%), Positives = 92/115 (80%)
 Frame = +3

Query: 156 GMPDSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE 335
           G   ++N  GG         KEQDRFLPIAN+ RIM++A+P N KI+KD+KE+VQECVSE
Sbjct: 4   GFDGTENGGGGGGGG---VGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSE 60

Query: 336 FISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGE 500
           FISFIT EASDKC +EKRKTINGDDL+W+M TLGFEDY+EPLKLYL  +RE EG+
Sbjct: 61  FISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGD 115

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>NFYB6_ARATH (Q84W66) Nuclear transcription factor Y subunit B-6 (AtNF-YB-6)|
           (Protein LEAFY COTYLEDON 1-LIKE)
          Length = 234

 Score =  159 bits (403), Expect = 3e-39
 Identities = 71/103 (68%), Positives = 92/103 (89%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           +EQDRF+PIANV RIM++ LPA+AKIS D+KET+QECVSE+ISFITGEA+++CQRE+RKT
Sbjct: 57  REQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKT 116

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGAGAG 524
           I  +D+LWAM+ LGF+DY+EPL LYLH++RELEGE+ +   AG
Sbjct: 117 ITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGERGVSCSAG 159

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>NFYB5_ARATH (O82248) Nuclear transcription factor Y subunit B-5 (AtNF-YB-5)|
          Length = 160

 Score =  159 bits (401), Expect = 6e-39
 Identities = 75/103 (72%), Positives = 85/103 (82%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           KEQDR LPIANV RIMK  LPANAK+SK+AKET+QECVSEFISF+TGEASDKC +EKRKT
Sbjct: 50  KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKT 109

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAIGAGAG 524
           +NGDD+ WAM  LGF+DY   LK YLH++R LEGEK    G G
Sbjct: 110 VNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGEKPNHHGKG 152

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>NFYB_CHICK (P25207) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 205

 Score =  152 bits (383), Expect = 7e-37
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 165 DSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFIS 344
           DS ND    +N    S +EQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFIS
Sbjct: 35  DSMNDHED-TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFIS 93

Query: 345 FITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-LEGEKAIG 512
           FIT EAS++C +EKRKTING+D+L+AM+TLGF+ Y+EPLKLYL KFRE ++GEK IG
Sbjct: 94  FITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIG 150

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>NFYB_RAT (P63140) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B) (CCAAT-binding
           transcription factor subunit A) (CBF-A)
          Length = 207

 Score =  152 bits (383), Expect = 7e-37
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 165 DSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFIS 344
           DS ND    +N    S +EQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFIS
Sbjct: 37  DSMNDHED-TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFIS 95

Query: 345 FITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-LEGEKAIG 512
           FIT EAS++C +EKRKTING+D+L+AM+TLGF+ Y+EPLKLYL KFRE ++GEK IG
Sbjct: 96  FITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIG 152

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>NFYB_MOUSE (P63139) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 207

 Score =  152 bits (383), Expect = 7e-37
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 165 DSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFIS 344
           DS ND    +N    S +EQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFIS
Sbjct: 37  DSMNDHED-TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFIS 95

Query: 345 FITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-LEGEKAIG 512
           FIT EAS++C +EKRKTING+D+L+AM+TLGF+ Y+EPLKLYL KFRE ++GEK IG
Sbjct: 96  FITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIG 152

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>NFYB_HUMAN (P25208) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 207

 Score =  152 bits (383), Expect = 7e-37
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 165 DSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFIS 344
           DS ND    +N    S +EQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFIS
Sbjct: 37  DSMNDHED-TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFIS 95

Query: 345 FITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-LEGEKAIG 512
           FIT EAS++C +EKRKTING+D+L+AM+TLGF+ Y+EPLKLYL KFRE ++GEK IG
Sbjct: 96  FITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIG 152

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>NFYB_HORSE (Q6RG77) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 207

 Score =  152 bits (383), Expect = 7e-37
 Identities = 78/117 (66%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 165 DSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFIS 344
           DS ND    +N    S +EQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFIS
Sbjct: 37  DSMNDHED-TNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFIS 95

Query: 345 FITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-LEGEKAIG 512
           FIT EAS++C +EKRKTING+D+L+AM+TLGF+ Y+EPLKLYL KFRE ++GEK IG
Sbjct: 96  FITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGEKGIG 152

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>NFYB_PETMA (P25210) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B)
          Length = 209

 Score =  144 bits (364), Expect = 1e-34
 Identities = 69/101 (68%), Positives = 89/101 (88%), Gaps = 1/101 (0%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           +EQD +LPIANV+RIMK ++P++ KI+KDAKE VQECVSEFISFIT EAS++C +EKRKT
Sbjct: 54  REQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKT 113

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-LEGEKAIGA 515
           ING+D+L+AM+TLGF+ Y+EPLK YL K+RE ++GEK I A
Sbjct: 114 INGEDILFAMSTLGFDSYVEPLKQYLQKYRESMKGEKGINA 154

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>NFYB9_ARATH (Q9SFD8) Nuclear transcription factor Y subunit B-9 (AtNF-YB-9)|
           (Protein LEAFY COTYLEDON 1)
          Length = 208

 Score =  139 bits (350), Expect = 5e-33
 Identities = 58/96 (60%), Positives = 88/96 (91%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           +EQD+++PIANV RIM+K LP++AKIS DAKET+QECVSE+ISF+TGEA+++CQRE+RKT
Sbjct: 28  REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKT 87

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           I  +D+LWAM+ LGF++Y++PL ++++++RE+E ++
Sbjct: 88  ITAEDILWAMSKLGFDNYVDPLTVFINRYREIETDR 123

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>NFYB4_ARATH (O04027) Nuclear transcription factor Y subunit B-4 (AtNF-YB-4)|
           (Transcriptional activator HAP3D)
          Length = 139

 Score =  133 bits (335), Expect = 3e-31
 Identities = 59/95 (62%), Positives = 80/95 (84%)
 Frame = +3

Query: 219 EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 398
           ++DR LPIANV R+MK+ LP+NAKISK+AK+TVQEC +EFISF+T EAS+KC RE RKT+
Sbjct: 3   DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTV 62

Query: 399 NGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           NGDD+ WA++TLG ++Y + +  +LHK+RE E E+
Sbjct: 63  NGDDIWWALSTLGLDNYADAVGRHLHKYREAERER 97

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>HAP3_YEAST (P13434) Transcriptional activator HAP3 (UAS2 regulatory protein A)|
          Length = 144

 Score =  130 bits (327), Expect = 2e-30
 Identities = 63/119 (52%), Positives = 89/119 (74%), Gaps = 5/119 (4%)
 Frame = +3

Query: 162 PDSDNDSGGPSNAD-----FSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQEC 326
           P+   ++GG +++       S+ +EQDR+LPI NV+R+MK  LP +AK+SKDAKE +QEC
Sbjct: 13  PEDTQENGGNASSSGSLQQISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQEC 72

Query: 327 VSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           VSE ISF+T EASD+C  +KRKTING+D+L ++  LGFE+Y E LK+YL K+R+ +  K
Sbjct: 73  VSELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIYLAKYRQQQALK 131

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>HAP3_SCHPO (P36611) Transcriptional activator hap3|
          Length = 116

 Score =  126 bits (316), Expect = 4e-29
 Identities = 61/91 (67%), Positives = 76/91 (83%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIANV+RIMK ALP NAKISK+AK+ VQ+CVSEFISF+TGEAS++C +EKRKTI G+D+
Sbjct: 12  LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDV 71

Query: 414 LWAMTTLGFEDYMEPLKLYLHKFRELEGEKA 506
           L A+ TLGFE+Y E LK+ L K+RE +   A
Sbjct: 72  LLALNTLGFENYAEVLKISLTKYREQQARSA 102

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>HAP3_KLULA (P40914) Transcriptional activator HAP3|
          Length = 205

 Score =  125 bits (313), Expect = 9e-29
 Identities = 59/95 (62%), Positives = 75/95 (78%)
 Frame = +3

Query: 219 EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 398
           EQDR+LPI NV+R+MK  LPA  K+SKDAKE +QECVSEFISF+T EA D+C   KRKTI
Sbjct: 22  EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81

Query: 399 NGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           NG+D+L ++  LGFE+Y E LK+YL K+R+ +  K
Sbjct: 82  NGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIK 116

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>NFYB_XENLA (P25211) Nuclear transcription factor Y subunit beta (Nuclear|
           transcription factor Y subunit B) (NF-YB) (CAAT-box
           DNA-binding protein subunit B) (Fragment)
          Length = 122

 Score =  105 bits (263), Expect = 6e-23
 Identities = 50/67 (74%), Positives = 61/67 (91%), Gaps = 1/67 (1%)
 Frame = +3

Query: 315 VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRE-L 491
           VQECVSEFISFIT EAS++C +EKRKTING+D+L+AM+TLGF+ Y+EPLKLYL KFRE +
Sbjct: 1   VQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAM 60

Query: 492 EGEKAIG 512
           +GEK IG
Sbjct: 61  KGEKGIG 67

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>NFYB1_ORYSA (Q6Z348) Nuclear transcription factor Y subunit B-1 (OsNF-YB-1)|
           (CCAAT-binding transcription factor subunit NF-YB1)
          Length = 186

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 42/109 (38%), Positives = 63/109 (57%)
 Frame = +3

Query: 168 SDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISF 347
           SD   G  +NA+          LP+AN+ R++KK LP  AKI   AK    +C  EF+ F
Sbjct: 22  SDGVGGSATNAE----------LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGF 71

Query: 348 ITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELE 494
           +  EAS+K + E R+T+  +D L +   LGF+ Y++P+  Y+H +RE E
Sbjct: 72  VGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYREFE 120

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>NC2B_DROME (Q9VJQ5) Negative cofactor 2 beta (dNC2) (Down-regulator of|
           transcription 1)
          Length = 183

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 31/98 (31%), Positives = 61/98 (62%)
 Frame = +3

Query: 210 SPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKR 389
           S ++ +  LP A++++I+K+ +P   +++ +++E +  C SEFI  I+ EA++ C    +
Sbjct: 12  SAEDDELTLPRASINKIIKELVPT-VRVANESRELILNCCSEFIHLISSEANEVCNMRNK 70

Query: 390 KTINGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           KTIN + +L A+  LGF DY +  +  LH  +E+  ++
Sbjct: 71  KTINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKR 108

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>DR1_ARATH (P49592) Dr1 protein homolog|
          Length = 159

 Score = 68.9 bits (167), Expect = 8e-12
 Identities = 29/85 (34%), Positives = 57/85 (67%)
 Frame = +3

Query: 201 DFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQR 380
           D     ++D  LP A +++I+K+ LP + ++++DA++ + EC  EFI+ ++ E++D C +
Sbjct: 5   DIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNK 64

Query: 381 EKRKTINGDDLLWAMTTLGFEDYME 455
           E ++TI  + +L A+  LGF +Y+E
Sbjct: 65  EDKRTIAPEHVLKALQVLGFGEYIE 89

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>DPOE3_RAT (Q642A5) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17)
          Length = 145

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           + +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT
Sbjct: 4   RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKF-RELEGEK 503
           +N  D+L AM  + F+ ++ PLK  L  + RE +G+K
Sbjct: 64  LNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKK 100

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>DPOE3_PONPY (Q5R4W3) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17)
          Length = 147

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           + +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT
Sbjct: 4   RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKF-RELEGEK 503
           +N  D+L AM  + F+ ++ PLK  L  + RE +G+K
Sbjct: 64  LNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKK 100

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>DPOE3_HUMAN (Q9NRF9) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17) (Chromatin accessibility complex 17) (HuCHRAC17)
           (CHRAC-17) (Arsenic-transactivated protein) (AsTP)
          Length = 147

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           + +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT
Sbjct: 4   RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKF-RELEGEK 503
           +N  D+L AM  + F+ ++ PLK  L  + RE +G+K
Sbjct: 64  LNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKK 100

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>TBAP_RAT (Q5XI68) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1) (Negative cofactor 2
           beta) (NC2 beta)
          Length = 176

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 31/91 (34%), Positives = 59/91 (64%)
 Frame = +3

Query: 207 SSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 386
           SS  + D  +P A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + +
Sbjct: 4   SSGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSE 62

Query: 387 RKTINGDDLLWAMTTLGFEDYMEPLKLYLHK 479
           +KTI+ + ++ A+ +LGF  Y+  +K  L +
Sbjct: 63  KKTISPEHVIQALESLGFGSYISEVKEVLQE 93

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>TBAP_MOUSE (Q91WV0) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1) (Negative cofactor 2
           beta) (NC2 beta)
          Length = 176

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 31/91 (34%), Positives = 59/91 (64%)
 Frame = +3

Query: 207 SSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 386
           SS  + D  +P A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + +
Sbjct: 4   SSGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSE 62

Query: 387 RKTINGDDLLWAMTTLGFEDYMEPLKLYLHK 479
           +KTI+ + ++ A+ +LGF  Y+  +K  L +
Sbjct: 63  KKTISPEHVIQALESLGFGSYISEVKEVLQE 93

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>TBAP_HUMAN (Q01658) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1) (Dr1 protein)
           (Negative cofactor 2 beta) (NC2 beta)
          Length = 176

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 31/91 (34%), Positives = 59/91 (64%)
 Frame = +3

Query: 207 SSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 386
           SS  + D  +P A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + +
Sbjct: 4   SSGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSE 62

Query: 387 RKTINGDDLLWAMTTLGFEDYMEPLKLYLHK 479
           +KTI+ + ++ A+ +LGF  Y+  +K  L +
Sbjct: 63  KKTISPEHVIQALESLGFGSYISEVKEVLQE 93

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>TBAP_CHICK (Q5ZMV3) TATA-binding protein-associated phosphoprotein|
           (Down-regulator of transcription 1)
          Length = 176

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 31/91 (34%), Positives = 59/91 (64%)
 Frame = +3

Query: 207 SSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 386
           SS  + D  +P A +++++K+ LP N +++ DA+E V  C +EFI  I+ EA++ C + +
Sbjct: 4   SSGNDDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSE 62

Query: 387 RKTINGDDLLWAMTTLGFEDYMEPLKLYLHK 479
           +KTI+ + ++ A+ +LGF  Y+  +K  L +
Sbjct: 63  KKTISPEHVIQALESLGFGSYISEVKEVLQE 93

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>DPOE3_MOUSE (Q9JKP7) DNA polymerase epsilon subunit 3 (EC 2.7.7.7) (DNA|
           polymerase II subunit 3) (DNA polymerase epsilon subunit
           p17) (YB-like protein 1) (YBL1) (NF-YB-like protein)
          Length = 145

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 35/96 (36%), Positives = 56/96 (58%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           + +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT
Sbjct: 4   RPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKT 63

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEK 503
           +N  D+L AM  + F+ ++ PLK  L  +R  E  K
Sbjct: 64  LNASDVLSAMEEMEFQRFITPLKEALEAYRRDEKGK 99

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>DPB4_SCHPO (P87174) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 210

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/95 (24%), Positives = 48/95 (50%)
 Frame = +3

Query: 225 DRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTING 404
           D  LP + + R++K  LP  + + K+A + +    + F+SF+T  + +      RK +  
Sbjct: 14  DLALPRSIIMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTSASGEIATNNNRKILMP 73

Query: 405 DDLLWAMTTLGFEDYMEPLKLYLHKFRELEGEKAI 509
            D+L A+  + + ++ + LK +L  +     EK +
Sbjct: 74  QDVLNALDEIEYPEFSKTLKKHLEAYELALKEKRL 108

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>DPB4_YARLI (Q6CHS6) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 163

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/88 (22%), Positives = 42/88 (47%)
 Frame = +3

Query: 225 DRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTING 404
           D   P + +  + K+ LP +A ISKDA   +Q   + F+S++    +   +   RK I  
Sbjct: 34  DLLYPKSTIKNLAKETLPDDAIISKDALTAIQRAATLFVSYMASHGNASAEAGGRKKITP 93

Query: 405 DDLLWAMTTLGFEDYMEPLKLYLHKFRE 488
            D+  A+  +    ++  +   +++F +
Sbjct: 94  QDVFVALKDVDLAQFVPSVTQSVNEFEQ 121

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>HAF1_ARCFU (O29910) Probable archaeal histone A1-1|
          Length = 72

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 21/67 (31%), Positives = 40/67 (59%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LP+A V R+++KA    +++S+DAK  + + + E+   I  +A++  +   RKT+  DD+
Sbjct: 8   LPLAPVERLLRKA--GASRVSEDAKVELAKAIEEYAMQIGKKAAELAKHAGRKTVKVDDI 65

Query: 414 LWAMTTL 434
             A+  L
Sbjct: 66  KLALREL 72

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>DPB4_DEBHA (Q6BIP4) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 247

 Score = 37.0 bits (84), Expect = 0.033
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
 Frame = +3

Query: 237 PIANVSRIMKKALPA-------NAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           P A V ++ K  + A       N  ++KD+   +Q   + F+S +  +A    + E RKT
Sbjct: 32  PRATVQKLAKNIMNASSDEGASNMILAKDSMIALQRSSTVFVSHLMFQARQISKDEGRKT 91

Query: 396 INGDDLLWAMTTLGFEDYMEPLKLYLHKF 482
           IN  D+L A+    F  ++  +K  L  F
Sbjct: 92  INAQDILSALEKAEFSGFIPEVKQKLSVF 120

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>HMT1_METTH (P50483) DNA-binding protein HMt-1.1 (Archaeal histone A1)|
          Length = 67

 Score = 36.6 bits (83), Expect = 0.043
 Identities = 24/67 (35%), Positives = 35/67 (52%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA V RI+K A     +IS DAKE + + + E    I+ +A +  +   RKT+   D+
Sbjct: 3   LPIAPVGRIIKNA--GAQRISDDAKEALAKALEEMGEEISRKAVELAKHAGRKTVKATDI 60

Query: 414 LWAMTTL 434
             A   L
Sbjct: 61  EMAAKQL 67

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>HAF2_ARCFU (O28779) Probable archaeal histone A1-2|
          Length = 67

 Score = 36.2 bits (82), Expect = 0.056
 Identities = 19/65 (29%), Positives = 37/65 (56%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LP+A V R+++KA     ++S DA E + E + ++   +  +A +  +   RKT+  DD+
Sbjct: 4   LPMAPVDRLIRKA--GAERVSADAVEKMVEVLEDYAITVAKKAVEIAKHSGRKTVTADDI 61

Query: 414 LWAMT 428
             A++
Sbjct: 62  KLALS 66

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>HFO2_METFO (P48783) Archaeal histone A2|
          Length = 67

 Score = 35.4 bits (80), Expect = 0.096
 Identities = 22/64 (34%), Positives = 35/64 (54%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA V RI+K A     +IS DAKE + + + E    +  +A +  +   RKT+  +D+
Sbjct: 3   LPIAPVGRIIKNA--GAQRISDDAKEALAKALEENGEELAKKAVELAKHAGRKTVKAEDI 60

Query: 414 LWAM 425
             A+
Sbjct: 61  EMAV 64

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>HFO1_METFO (P48782) Archaeal histone A1|
          Length = 67

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA V RI+K A     ++S DA++ + + + E    I  EA    +   RKT+   D+
Sbjct: 3   LPIAPVGRIIKNA--GAPRVSDDARDALAKVLEEMGEGIAAEAVKLAKHAGRKTVKASDI 60

Query: 414 LWAM 425
             A+
Sbjct: 61  EMAV 64

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>HMFB_METFE (P19267) DNA-binding protein HMf-2 (Archaeal histone B)|
          Length = 69

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA + RI+K A     ++S DA+ T+ + + E    I  EA    +   RKTI  +D+
Sbjct: 3   LPIAPIGRIIKDA--GAERVSDDARITLAKILEEMGRDIASEAIKLARHAGRKTIKAEDI 60

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>HFOB_METFO (P48784) Archaeal histone B|
          Length = 67

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 22/67 (32%), Positives = 34/67 (50%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA + RI+K A     ++S DA+E + + + E    I  EA    +   RKT+   D+
Sbjct: 3   LPIAPIGRIIKNA--GAERVSDDAREALAKALEEKGETIATEAVKLAKHAGRKTVKASDV 60

Query: 414 LWAMTTL 434
             A+  L
Sbjct: 61  ELAVKRL 67

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>HMT2_METTH (O27731) DNA-binding protein HMt-1.2 (Archaeal histone A2)|
          Length = 67

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA V RI+K A     +IS DA+E + + + E    I  EA    +   RKT+   D+
Sbjct: 3   LPIAPVGRIIKNA--GAQRISDDAREALAKILEEKGEEIAKEAVKLAKHAGRKTVKASDI 60

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>HMFA_METFE (P48781) DNA-binding protein HMf-1 (Archaeal histone A)|
          Length = 69

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +3

Query: 234 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDL 413
           LPIA + RI+K A     ++S DA+  + + + E    I  EA    +   RKTI  +D+
Sbjct: 4   LPIAPIGRIIKNA--GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDI 61

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>H2B2_LYTPI (P06146) Histone H2B.2, sperm|
          Length = 142

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 25/87 (28%), Positives = 40/87 (45%)
 Frame = +3

Query: 249 VSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMT 428
           + R++K+  P +  IS      +   V++    I GEAS  CQ  +R+TI+  ++  A+ 
Sbjct: 58  IYRVLKQVHP-DTGISSRGMSVMNSFVNDVFERIAGEASRLCQANRRRTISSREIQTAVR 116

Query: 429 TLGFEDYMEPLKLYLHKFRELEGEKAI 509
            L        L   L K    EG KA+
Sbjct: 117 LL--------LPGELAKHAVSEGTKAV 135

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>DPB4_ASHGO (Q750A4) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 204

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 291 ISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDY 449
           +SKDA   +Q   + F++ +   A    Q   RK+ +G+D+L A+  +G   +
Sbjct: 100 LSKDASLALQRSSTVFVNHLLMHARQIAQSNDRKSCSGEDVLKALDQIGLAGF 152

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>CAC1E_RABIT (Q02343) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2259

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 303  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 434
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1312 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1355

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>CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (RBE-II) (RBE2) (Brain calcium channel II) (BII)
          Length = 2222

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 303  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 434
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1274 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1317

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>CAC1E_HUMAN (Q15878) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2312

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 303  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 434
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1321 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1364

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>CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2272

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/44 (27%), Positives = 25/44 (56%)
 Frame = +3

Query: 303  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTL 434
            +K+T +EC+  ++     +   K +  KR   + D+++WA+ TL
Sbjct: 1325 SKDTEKECIGNYVDHEKNKMEVKGREWKRHEFHYDNIIWALLTL 1368

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>DPB4_YEAST (Q04603) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 196

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
 Frame = +3

Query: 222 QDRFLP---IANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRK 392
           QD   P   I N++R + +       I+KDA   +Q   + F++ +   A +  + + +K
Sbjct: 29  QDLLFPKSTIVNLAREVPQQSGKKLLINKDASLALQRGATVFVNHLLLFAREIAKSQDKK 88

Query: 393 TINGDDLLWAMTTLGFEDYMEPLKLYLHKFR 485
           + + DD+L A+  +G      P++  L +++
Sbjct: 89  SCSVDDVLSALDHIGHSALKGPVRDKLDEYQ 119

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>DPB4_CANGA (Q6FXD0) DNA polymerase epsilon subunit D (EC 2.7.7.7) (DNA|
           polymerase II subunit D)
          Length = 191

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
 Frame = +3

Query: 291 ISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG----------- 437
           ++KDA   +Q   + F++ +   A +  + + R++ N DD+L A+  +G           
Sbjct: 74  VTKDASMALQHSATVFVNHLLMYARELAKEQDRRSCNVDDILNALEHMGHPGLKPLVANR 133

Query: 438 FEDYMEPLK 464
            +DY E L+
Sbjct: 134 LDDYQEALE 142

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>C11B1_PAPHU (Q29527) Cytochrome P450 11B1, mitochondrial precursor (EC|
           1.14.15.4) (CYPXIB1) (P450C11) (Steroid
           11-beta-hydroxylase)
          Length = 503

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +3

Query: 195 NADFSSPKEQDRFLPIAN-VSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASD 368
           N D  SPK   RFLP+ + V+R   +AL    K+ ++A+E+V   +   I   T EAS+
Sbjct: 145 NPDVLSPKAVQRFLPMVDAVARDFSQAL--RKKVVQNARESVTLDIQPSIFHYTIEASN 201

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>CXA8_MOUSE (P28236) Gap junction alpha-8 protein (Connexin-50) (Cx50) (Lens|
           fiber protein MP70)
          Length = 439

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
 Frame = +3

Query: 153 VGMPDSDNDSGGPSNADFSSPKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVS 332
           VGM ++   S  P    FS  +E+    P+A++SR  ++ LP+ A++     E  +  + 
Sbjct: 290 VGMVETSPLSAKP----FSQFEEKIGTGPLADMSRSYQETLPSYAQVGVQEVEREEPPIE 345

Query: 333 EFISFITGEASDKCQR---EKRKTINGDDLLWAMTT-LGFEDYMEPLKLYLHKFRELEGE 500
           E +    GE   + ++   E ++T+   D     T  +G ED  E L+      + L  E
Sbjct: 346 EAVEPEVGEKKQEAEKVAPEGQETVAVPDRERVETPGVGKEDEKEELQAEKVTKQGLSAE 405

Query: 501 KA 506
           KA
Sbjct: 406 KA 407

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>H2A_ENCCU (Q8SSG3) Histone H2A|
          Length = 128

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 216 KEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKT 395
           + Q   + ++ + +IMK       +ISKDA   V  CV   IS IT  A +    + +K 
Sbjct: 21  EHQKSIVKLSQIKKIMKDR--TRMRISKDALVAVSACVMYLISEITDGAKNVASTDGKKK 78

Query: 396 I 398
           +
Sbjct: 79  V 79

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>DGKG_RAT (P49620) Diacylglycerol kinase gamma (EC 2.7.1.107) (Diglyceride|
           kinase gamma) (DGK-gamma) (DAG kinase gamma) (88 kDa
           diacylglycerol kinase)
          Length = 788

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = -2

Query: 409 SSPLMVLRFSRWHLSEASPVMKEMNSDTHSCTVSFASLEILALAGSAFFMIRLTLAIGRN 230
           S  L V ++  W  +E  P++KEM          F SLE     G     I L + +G +
Sbjct: 202 SQMLHVAQYLEWDPTELRPILKEMLQGMDYNKDGFVSLEEWVSGGMT--TIPLLVLLGMD 259

Query: 229 LSCSLGDEKSA 197
            S S GD + A
Sbjct: 260 DSASKGDGRHA 270

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>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = -1

Query: 161 HPDPPTEAKKQXXXXXXXXXLQPIKRPEQPNTSQTRKAPNQRLQEQEGSA 12
           H  PP +A+K           Q  + P+ P T Q ++AP  +  +Q   A
Sbjct: 680 HAQPPQQAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQA 729

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>FZD6_HUMAN (O60353) Frizzled 6 precursor (Frizzled-6) (Fz-6) (hFz6)|
          Length = 706

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = -2

Query: 340 MNSDTHSCTVSFASLEILALAGSAFFMIRLT----LAIGRNLSCSLGDEKS 200
           + S   +CTV F  L    +AG+ +++I LT    LA GR  SC   ++K+
Sbjct: 275 LGSQNKACTVLFMLLYFFTMAGTVWWVI-LTITWFLAAGRKWSCEAIEQKA 324

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>CAC1F_HUMAN (O60840) Voltage-dependent L-type calcium channel alpha-1F subunit|
            (Voltage-gated calcium channel alpha subunit Cav1.4)
          Length = 1966

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +3

Query: 300  DAKETVQECVSEFISFITGEASDKCQREK---RKTINGDDLLWAMTTL 434
            +AK T QEC   F+ +  G+ S    RE+       N D++L AM  L
Sbjct: 1021 EAKHTPQECKGSFLVYPDGDVSRPLVRERLWVNSDFNFDNVLSAMMAL 1068

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>FZD6_CANFA (Q8WMU5) Frizzled 6 precursor (Frizzled-6) (Fz-6)|
          Length = 712

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = -2

Query: 340 MNSDTHSCTVSFASLEILALAGSAFFMIRLT----LAIGRNLSCSLGDEKS 200
           + S   +CTV F  L    +AG+ +++I LT    LA GR  SC   ++K+
Sbjct: 275 LGSQNKACTVLFMFLYFFTMAGTVWWVI-LTITWFLAAGRKWSCEAIEQKA 324


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,226,554
Number of Sequences: 219361
Number of extensions: 1212734
Number of successful extensions: 5281
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 4966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5265
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result