Clone Name	bah63n22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase	1033	0.0
2	ref|XM_479446.1| Oryza sativa (japonica cultivar-group), mRNA	442	e-121
3	dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clon...	442	e-121
4	gb|AY104014.1| Zea mays PCO103489 mRNA sequence	321	2e-84
5	gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence	289	5e-75
6	emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene	254	3e-64
7	gb|AF140230.1|AF140230 Oryza sativa xylose isomerase mRNA, parti...	194	2e-46
8	ref|NM_180872.1| Arabidopsis thaliana xylose isomerase AT5G57655...	184	2e-43
9	ref|NM_125147.3| Arabidopsis thaliana xylose isomerase AT5G57655...	184	2e-43
10	gb|AY136469.1| Arabidopsis thaliana expressed protein; supported...	184	2e-43
11	gb|BT006607.1| Arabidopsis thaliana At5g57655 mRNA, complete cds	184	2e-43
12	emb|BX831279.1|CNS09ZCJ Arabidopsis thaliana Full-length cDNA Co...	184	2e-43
13	gb|AY084958.1| Arabidopsis thaliana clone 122798 mRNA, complete ...	178	1e-41
14	gb|AY084800.1| Arabidopsis thaliana clone 118282 mRNA, complete ...	176	6e-41
15	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	167	5e-38
16	dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic D...	167	5e-38
17	dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	80	1e-11
18	gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete se...	44	0.54
19	dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.54
20	gb|AF045552.1|AF045552 Lactobacillus brevis xyl operon and xylos...	44	0.54
21	gb|M84564.1|LBAXYLA Lactobacillus xylose isomerase (xylA) gene, ...	44	0.54
22	emb|AL449266.17| Human DNA sequence from clone RP11-475E11 on ch...	42	2.2
23	gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, comp...	42	2.2
24	gb|AC069181.9| Homo sapiens chromosome 8, clone RP11-200A24, com...	42	2.2
25	gb|CP000009.1| Gluconobacter oxydans 621H, complete genome	42	2.2
26	gb|AE015451.1| Pseudomonas putida KT2440 complete genome	42	2.2
27	dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone...	42	2.2
28	gb|U82478.1|BGU82478 Biomphalaria glabrata fibrinogen-related pr...	40	8.5
29	gb|AC118747.5| Mus musculus chromosome 5, clone RP24-194J1, comp...	40	8.5
30	gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome...	40	8.5
31	gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosom...	40	8.5
32	gb|AC126428.3| Mus musculus BAC clone RP24-387B13 from chromosom...	40	8.5
33	emb|CR936913.7| Human DNA sequence from clone DAAP-27A1 on chrom...	40	8.5
34	ref|XM_815454.1| Trypanosoma cruzi strain CL Brener transcriptio...	40	8.5
35	gb|AC121961.2| Mus musculus BAC clone RP24-255E8 from 10, comple...	40	8.5
36	gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete s...	40	8.5
37	emb|Z96104.1|HSO27 Human DNA sequence from clone XX-O27 on chrom...	40	8.5
38	emb|BX088556.11| Human DNA sequence from clone DASS-67H14 on chr...	40	8.5
39	emb|AL935042.6| Human DNA sequence from clone DAQB-96B10 on chro...	40	8.5
40	emb|AL645941.11| Human DNA sequence from clone XXbac-181M17 on c...	40	8.5
41	emb|AL662845.5| Human DNA sequence from clone XXbac-136A3 on chr...	40	8.5
42	emb|AL591470.12| Human DNA sequence from clone RP11-263I4 on chr...	40	8.5
43	emb|AL163538.9| Human DNA sequence from clone RP11-323P14 on chr...	40	8.5
44	emb|AL157934.17| Human DNA sequence from clone RP11-449M9 on chr...	40	8.5
45	emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 o...	40	8.5
46	emb|Z37112.2|BBCYAAG Bordetella bronchiseptica cyaA gene for ade...	40	8.5
47	emb|X76775.1|HSHLADMAG H.sapiens HLA-DMA gene	40	8.5
48	emb|AJ249909.1|PSP249909 Piromyces sp. E2 mRNA for xylose isomer...	40	8.5
49	emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chr...	40	8.5
50	emb|CR759798.3| Human DNA sequence from clone DAMC-226H3 on chro...	40	8.5
51	emb|CR752645.3| Human DNA sequence from clone DADB-223G19 on chr...	40	8.5
52	gb|AC109515.6| Homo sapiens chromosome 17, clone CTD-2503K16, co...	40	8.5
53	dbj|D14281.1|STMPSN22 Streptomyces flavovirens plasmid pSN22 DNA...	40	8.5
54	gb|AE010214.1| Pyrococcus furiosus DSM 3638, section 89 of 173 o...	40	8.5
55	emb|BX908719.9| Human DNA sequence from clone DAMA-147C13 on chr...	40	8.5
56	gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, com...	40	8.5
57	dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome	40	8.5
58	dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	8.5
59	dbj|AP001648.4| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	8.5
60	gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge...	40	8.5
61	emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from...	40	8.5
62	emb|X87344.1|HSEVMHC H.sapiens DMA, DMB, HLA-Z1, IPP2, LMP2, TAP...	40	8.5

---

>emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase
          Length = 1710

 Score = 1033 bits (521), Expect = 0.0
 Identities = 536/541 (99%)
 Strand = Plus / Plus

                                                                       
Query: 84  ggcggccgccgcgttgcacaggccttgcgccatgaagggcggggagctcctggtcctgct 143
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  ggcggccgccgcgttgcagaggccttgcgccatgaagggcggggagctcctggtcctgct 107

                                                                       
Query: 144 gctggcctcgtccctctgcctgtccgccgcggttgccgcgcaggaaacctgcccggccga 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 gctggcctcgtccctctgcctgtccgccgcggttgccgcgcaggaaacctgcccggccga 167

                                                                       
Query: 204 catcggcgccaagtgcgccgatgccgcctccgatgattgggagggcgagttcttccccgg 263
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 catcggcgccaagtgcaccgatgccgcctccgatgattgggagggcgagttcttccccgg 227

                                                                       
Query: 264 cattgcaaagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggta 323
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 cattgacaagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggta 287

                                                                       
Query: 324 taacgcggaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggc 383
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 288 taacgcggaggaagtgatcctcggaaagaaaatgaaggattggtttcggttcagcgtggc 347

                                                                       
Query: 384 gttttggcatacgttccggggtactggaggagatccctttggtgcacctacgaagaactg 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gttttggcatacgttccggggtactggaggagatccctttggtgcacctacgaagaactg 407

                                                                       
Query: 444 gccttgggaggatggcaccaattccttggccatggctaagagaagaatgaaagctcactt 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gccttgggaggatggcaccaattccttggccatggctaagagaagaatgaaagctcactt 467

                                                                       
Query: 504 cgagttcatggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccc 563
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 cgagttcatggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccc 527

                                                                       
Query: 564 tgatggcaaaacactcgcggaaacaaatgctaacttggatgagatagttgagctggcaaa 623
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgatggcaaaacactcgcggaaacaaatgctaacttggatgagatagttgagctggcaaa 587

            
Query: 624 g 624
           |
Sbjct: 588 g 588



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 29 ccgcttaaccaaccccgcacgggtcgcggacctggtt 65
          |||||||||||||||||||||||||||||||||||||
Sbjct: 2  ccgcttaaccaaccccgcacgggtcgcggacctggtt 38

---

>ref|XM_479446.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1760

 Score =  442 bits (223), Expect = e-121
 Identities = 346/387 (89%)
 Strand = Plus / Plus

                                                                       
Query: 238 gattgggagggcgagttcttccccggcattgcaaagatcaactatgagggtcctaccagc 297
           |||||||| || ||||||||||| |||||  | |||||||| ||||||||||| | ||||
Sbjct: 230 gattgggaaggggagttcttccctggcatccccaagatcaagtatgagggtccaagcagc 289

                                                                       
Query: 298 aagaagccgctttcttacaagtggtataacgcggaggaagtgatcctcggaaagaaaatg 357
           ||||| |||||| ||||||||||||| || || ||||||||||| || || ||||| |||
Sbjct: 290 aagaacccgcttgcttacaagtggtacaatgctgaggaagtgattcttgggaagaagatg 349

                                                                       
Query: 358 aaggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagat 417
           ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 350 aaggattggatgcggttcagcgtggccttttggcatacgttccgtggtactggaggagat 409

                                                                       
Query: 418 ccctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatg 477
           || |||||||| ||||| |||   |||||||||||||||||||| ||||| |||| ||||
Sbjct: 410 ccttttggtgcccctacaaagtcttggccttgggaggatggcacaaattcgttggacatg 469

                                                                       
Query: 478 gctaagagaagaatgaaagctcacttcgagttcatggagaagcttggagttgaaaggtgg 537
           |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 470 gctaagagaagaatgagagctcactttgagttcatggagaagcttggagttgacaggtgg 529

                                                                       
Query: 538 tgcttccatgacagggacatcgcccctgatggcaaaacactcgcggaaacaaatgctaac 597
           ||||||||||||||||| || ||||||||||||||||||||| |||||||||||   || 
Sbjct: 530 tgcttccatgacagggatattgcccctgatggcaaaacactcacggaaacaaataaaaat 589

                                      
Query: 598 ttggatgagatagttgagctggcaaag 624
           ||||||||||||||||| |||||||||
Sbjct: 590 ttggatgagatagttgaactggcaaag 616

---

>dbj|AK072249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001E09, full
           insert sequence
          Length = 1760

 Score =  442 bits (223), Expect = e-121
 Identities = 346/387 (89%)
 Strand = Plus / Plus

                                                                       
Query: 238 gattgggagggcgagttcttccccggcattgcaaagatcaactatgagggtcctaccagc 297
           |||||||| || ||||||||||| |||||  | |||||||| ||||||||||| | ||||
Sbjct: 230 gattgggaaggggagttcttccctggcatccccaagatcaagtatgagggtccaagcagc 289

                                                                       
Query: 298 aagaagccgctttcttacaagtggtataacgcggaggaagtgatcctcggaaagaaaatg 357
           ||||| |||||| ||||||||||||| || || ||||||||||| || || ||||| |||
Sbjct: 290 aagaacccgcttgcttacaagtggtacaatgctgaggaagtgattcttgggaagaagatg 349

                                                                       
Query: 358 aaggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagat 417
           ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 350 aaggattggatgcggttcagcgtggccttttggcatacgttccgtggtactggaggagat 409

                                                                       
Query: 418 ccctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatg 477
           || |||||||| ||||| |||   |||||||||||||||||||| ||||| |||| ||||
Sbjct: 410 ccttttggtgcccctacaaagtcttggccttgggaggatggcacaaattcgttggacatg 469

                                                                       
Query: 478 gctaagagaagaatgaaagctcacttcgagttcatggagaagcttggagttgaaaggtgg 537
           |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 470 gctaagagaagaatgagagctcactttgagttcatggagaagcttggagttgacaggtgg 529

                                                                       
Query: 538 tgcttccatgacagggacatcgcccctgatggcaaaacactcgcggaaacaaatgctaac 597
           ||||||||||||||||| || ||||||||||||||||||||| |||||||||||   || 
Sbjct: 530 tgcttccatgacagggatattgcccctgatggcaaaacactcacggaaacaaataaaaat 589

                                      
Query: 598 ttggatgagatagttgagctggcaaag 624
           ||||||||||||||||| |||||||||
Sbjct: 590 ttggatgagatagttgaactggcaaag 616

---

>gb|AY104014.1| Zea mays PCO103489 mRNA sequence
          Length = 2135

 Score =  321 bits (162), Expect = 2e-84
 Identities = 333/390 (85%)
 Strand = Plus / Plus

                                                                       
Query: 235 gatgattgggagggcgagttcttccccggcattgcaaagatcaactatgagggtcctacc 294
           |||||||||||||| ||||||||||||||| |  | || ||||| ||||||||||| || 
Sbjct: 532 gatgattgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaaca 591

                                                                       
Query: 295 agcaagaagccgctttcttacaagtggtataacgcggaggaagtgatcctcggaaagaaa 354
           |||||||| || ||| |||| ||||||||||||  |||||||||||| ||||| ||||| 
Sbjct: 592 agcaagaaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaag 651

                                                                       
Query: 355 atgaaggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggagga 414
           |||||||||||| |||| ||||| || || || ||||| |||||||| |||||||| |  
Sbjct: 652 atgaaggattggatgcgcttcagtgttgcattctggcacacgttccgtggtactggcgct 711

                                                                       
Query: 415 gatccctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggcc 474
           ||||| || ||||| ||||| ||||  |||||||||||||| ||||| ||||| ||||||
Sbjct: 712 gatcctttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggcc 771

                                                                       
Query: 475 atggctaagagaagaatgaaagctcacttcgagttcatggagaagcttggagttgaaagg 534
           ||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||| |  
Sbjct: 772 atggctaagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaa 831

                                                                       
Query: 535 tggtgcttccatgacagggacatcgcccctgatggcaaaacactcgcggaaacaaatgct 594
           |||||||||||||||||||| || ||||| ||||| || || || |  ||||||||| ||
Sbjct: 832 tggtgcttccatgacagggatattgccccggatgggaagactcttgaagaaacaaattct 891

                                         
Query: 595 aacttggatgagatagttgagctggcaaag 624
           |||||||||||||||||  |||||||||||
Sbjct: 892 aacttggatgagatagtccagctggcaaag 921

---

>gb|BT018392.1| Zea mays clone EL01N0319D07.d mRNA sequence
          Length = 1548

 Score =  289 bits (146), Expect = 5e-75
 Identities = 284/330 (86%)
 Strand = Plus / Plus

                                                                       
Query: 295 agcaagaagccgctttcttacaagtggtataacgcggaggaagtgatcctcggaaagaaa 354
           |||||||| || ||| |||| ||||||||||||  |||||||||||| ||||| ||||| 
Sbjct: 14  agcaagaaccctcttgcttataagtggtataacctggaggaagtgattctcggtaagaag 73

                                                                       
Query: 355 atgaaggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggagga 414
           |||||||||||| |||| ||||| || ||||| ||||| |||||||| |||||||| |  
Sbjct: 74  atgaaggattggatgcgcttcagtgttgcgttctggcacacgttccgcggtactggcgct 133

                                                                       
Query: 415 gatccctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggcc 474
           ||||| || ||||| ||||| ||||  |||||||||||||||||||| ||||| ||||||
Sbjct: 134 gatcctttcggtgctcctacaaagacttggccttgggaggatggcacaaattcgttggcc 193

                                                                       
Query: 475 atggctaagagaagaatgaaagctcacttcgagttcatggagaagcttggagttgaaagg 534
           ||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||| |  
Sbjct: 194 atggctaagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaa 253

                                                                       
Query: 535 tggtgcttccatgacagggacatcgcccctgatggcaaaacactcgcggaaacaaatgct 594
           |||||||||||||||||||| || ||||| ||||| || || || |  ||||||||| ||
Sbjct: 254 tggtgcttccatgacagggatattgccccggatgggaagactcttgaagaaacaaattct 313

                                         
Query: 595 aacttggatgagatagttgagctggcaaag 624
           |||||||||||||||||  |||||||||||
Sbjct: 314 aacttggatgagatagtccagctggcaaag 343

---

>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene
          Length = 4473

 Score =  254 bits (128), Expect = 3e-64
 Identities = 131/132 (99%)
 Strand = Plus / Plus

                                                                        
Query: 359  aggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagatc 418
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 aggattggtttcggttcagcgtggcgttttggcatacgttccggggtactggaggagatc 1092

                                                                        
Query: 419  cctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatgg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 cctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatgg 1152

                        
Query: 479  ctaagagaagaa 490
            ||||||||||||
Sbjct: 1153 ctaagagaagaa 1164



 Score =  200 bits (101), Expect = 4e-48
 Identities = 110/113 (97%)
 Strand = Plus / Plus

                                                                       
Query: 174 ggttgccgcgcaggaaacctgcccggccgacatcggcgccaagtgcgccgatgccgcctc 233
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 646 ggttgccgcgcaggaaacctgcccggccgacatcggcgccaagtgcaccgatgccgcctc 705

                                                                
Query: 234 cgatgattgggagggcgagttcttccccggcattgcaaagatcaactatgagg 286
           |||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 706 cgatgattgggagggcgagttcttccccggcattgacaagatcaactatgagg 758



 Score =  184 bits (93), Expect = 2e-43
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                        
Query: 491  tgaaagctcacttcgagttcatggagaagcttggagttgaaaggtggtgcttccatgaca 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 tgaaagctcacttcgagttcatggagaagcttggagttgaaaggtggtgcttccatgaca 1323

                                             
Query: 551  gggacatcgcccctgatggcaaaacactcgcgg 583
            |||||||||||||||||||||||||||||||||
Sbjct: 1324 gggacatcgcccctgatggcaaaacactcgcgg 1356



 Score =  155 bits (78), Expect = 2e-34
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                       
Query: 284 agggtcctaccagcaagaagccgctttcttacaagtggtataacgcggaggaagtgatcc 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 agggtcctaccagcaagaagccgctttcttacaagtggtataacgcggaggaagtgatcc 909

                             
Query: 344 tcggaaagaaaatgaagg 361
           ||||||||||||||||||
Sbjct: 910 tcggaaagaaaatgaagg 927



 Score =  153 bits (77), Expect = 8e-34
 Identities = 80/81 (98%)
 Strand = Plus / Plus

                                                                       
Query: 96  gttgcacaggccttgcgccatgaagggcggggagctcctggtcctgctgctggcctcgtc 155
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gttgcagaggccttgcgccatgaagggcggggagctcctggtcctgctgctggcctcgtc 519

                                
Query: 156 cctctgcctgtccgccgcggt 176
           |||||||||||||||||||||
Sbjct: 520 cctctgcctgtccgccgcggt 540



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 43/43 (100%)
 Strand = Plus / Plus

                                                       
Query: 582  ggaaacaaatgctaacttggatgagatagttgagctggcaaag 624
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 ggaaacaaatgctaacttggatgagatagttgagctggcaaag 1925



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 29 ccgcttaaccaaccccgcacgggtcgcggacctggtt 65
          |||||||||||||||||||||||||||||||||||||
Sbjct: 2  ccgcttaaccaaccccgcacgggtcgcggacctggtt 38

---

>gb|AF140230.1|AF140230 Oryza sativa xylose isomerase mRNA, partial cds
          Length = 510

 Score =  194 bits (98), Expect = 2e-46
 Identities = 146/162 (90%)
 Strand = Plus / Plus

                                                                       
Query: 463 aattccttggccatggctaagagaagaatgaaagctcacttcgagttcatggagaagctt 522
           ||||| |||| ||||| |||||||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 3   aattcgttggacatgggtaagagaagaatgagagctcactttgagttcatgaagaagctt 62

                                                                       
Query: 523 ggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggcaaaacactcgcg 582
           | |||||| ||||||||||||||||||||||| || ||||||||||||||||||||| ||
Sbjct: 63  gaagttgacaggtggtgcttccatgacagggatattgcccctgatggcaaaacactcacg 122

                                                     
Query: 583 gaaacaaatgctaacttggatgagatagttgagctggcaaag 624
           |||||||||   || ||||||||||||||||| |||||||||
Sbjct: 123 gaaacaaataaaaatttggatgagatagttgaactggcaaag 164

---

>ref|NM_180872.1| Arabidopsis thaliana xylose isomerase AT5G57655 transcript variant
           AT5G57655.1 mRNA, complete cds
          Length = 1863

 Score =  184 bits (93), Expect = 2e-43
 Identities = 249/301 (82%)
 Strand = Plus / Plus

                                                                       
Query: 271 aagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggtataacgcg 330
           ||||| || |||||||| ||| | || ||||| || ||| |||||| |||||||||||| 
Sbjct: 305 aagattaagtatgagggaccttcgagtaagaacccacttgcttacaggtggtataacgct 364

                                                                       
Query: 331 gaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggcgttttgg 390
           || |||| ||| || || ||||||||||||||||||||  | ||||| || |||||||||
Sbjct: 365 gaagaagagattcttgggaagaaaatgaaggattggtttagattcagtgttgcgttttgg 424

                                                                       
Query: 391 catacgttccggggtactggaggagatccctttggtgcacctacgaagaactggccttgg 450
           ||||| ||||| || |||||||| ||||| ||||||||  |||| ||| | |||||||||
Sbjct: 425 catactttccgtgggactggaggtgatccatttggtgctgctactaagtattggccttgg 484

                                                                       
Query: 451 gaggatggcaccaattccttggccatggctaagagaagaatgaaagctcacttcgagttc 510
           || ||||| || || ||  || | ||||||||||||||||||| |||| |||| ||||||
Sbjct: 485 gaagatggtactaactctgtgtctatggctaagagaagaatgagagctaactttgagttc 544

                                                                       
Query: 511 atggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggc 570
            || |||| |||||||||||  ||||||| || |||||||| ||||| || |||||||||
Sbjct: 545 ttgaagaaacttggagttgattggtggtgttttcatgacagagacatagcacctgatggc 604

            
Query: 571 a 571
           |
Sbjct: 605 a 605

---

>ref|NM_125147.3| Arabidopsis thaliana xylose isomerase AT5G57655 transcript variant
           AT5G57655.2 mRNA, complete cds
          Length = 1902

 Score =  184 bits (93), Expect = 2e-43
 Identities = 249/301 (82%)
 Strand = Plus / Plus

                                                                       
Query: 271 aagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggtataacgcg 330
           ||||| || |||||||| ||| | || ||||| || ||| |||||| |||||||||||| 
Sbjct: 420 aagattaagtatgagggaccttcgagtaagaacccacttgcttacaggtggtataacgct 479

                                                                       
Query: 331 gaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggcgttttgg 390
           || |||| ||| || || ||||||||||||||||||||  | ||||| || |||||||||
Sbjct: 480 gaagaagagattcttgggaagaaaatgaaggattggtttagattcagtgttgcgttttgg 539

                                                                       
Query: 391 catacgttccggggtactggaggagatccctttggtgcacctacgaagaactggccttgg 450
           ||||| ||||| || |||||||| ||||| ||||||||  |||| ||| | |||||||||
Sbjct: 540 catactttccgtgggactggaggtgatccatttggtgctgctactaagtattggccttgg 599

                                                                       
Query: 451 gaggatggcaccaattccttggccatggctaagagaagaatgaaagctcacttcgagttc 510
           || ||||| || || ||  || | ||||||||||||||||||| |||| |||| ||||||
Sbjct: 600 gaagatggtactaactctgtgtctatggctaagagaagaatgagagctaactttgagttc 659

                                                                       
Query: 511 atggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggc 570
            || |||| |||||||||||  ||||||| || |||||||| ||||| || |||||||||
Sbjct: 660 ttgaagaaacttggagttgattggtggtgttttcatgacagagacatagcacctgatggc 719

            
Query: 571 a 571
           |
Sbjct: 720 a 720

---

>gb|AY136469.1| Arabidopsis thaliana expressed protein; supported by full length
           cDNA: Ceres: 122798 (At5g57655) mRNA, complete cds
          Length = 1823

 Score =  184 bits (93), Expect = 2e-43
 Identities = 249/301 (82%)
 Strand = Plus / Plus

                                                                       
Query: 271 aagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggtataacgcg 330
           ||||| || |||||||| ||| | || ||||| || ||| |||||| |||||||||||| 
Sbjct: 418 aagattaagtatgagggaccttcgagtaagaacccacttgcttacaggtggtataacgct 477

                                                                       
Query: 331 gaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggcgttttgg 390
           || |||| ||| || || ||||||||||||||||||||  | ||||| || |||||||||
Sbjct: 478 gaagaagagattcttgggaagaaaatgaaggattggtttagattcagtgttgcgttttgg 537

                                                                       
Query: 391 catacgttccggggtactggaggagatccctttggtgcacctacgaagaactggccttgg 450
           ||||| ||||| || |||||||| ||||| ||||||||  |||| ||| | |||||||||
Sbjct: 538 catactttccgtgggactggaggtgatccatttggtgctgctactaagtattggccttgg 597

                                                                       
Query: 451 gaggatggcaccaattccttggccatggctaagagaagaatgaaagctcacttcgagttc 510
           || ||||| || || ||  || | ||||||||||||||||||| |||| |||| ||||||
Sbjct: 598 gaagatggtactaactctgtgtctatggctaagagaagaatgagagctaactttgagttc 657

                                                                       
Query: 511 atggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggc 570
            || |||| |||||||||||  ||||||| || |||||||| ||||| || |||||||||
Sbjct: 658 ttgaagaaacttggagttgattggtggtgttttcatgacagagacatagcacctgatggc 717

            
Query: 571 a 571
           |
Sbjct: 718 a 718

---

>gb|BT006607.1| Arabidopsis thaliana At5g57655 mRNA, complete cds
          Length = 1434

 Score =  184 bits (93), Expect = 2e-43
 Identities = 249/301 (82%)
 Strand = Plus / Plus

                                                                       
Query: 271 aagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggtataacgcg 330
           ||||| || |||||||| ||| | || ||||| || ||| |||||| |||||||||||| 
Sbjct: 151 aagattaagtatgagggaccttcgagtaagaacccacttgcttacaggtggtataacgct 210

                                                                       
Query: 331 gaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggcgttttgg 390
           || |||| ||| || || ||||||||||||||||||||  | ||||| || |||||||||
Sbjct: 211 gaagaagagattcttgggaagaaaatgaaggattggtttagattcagtgttgcgttttgg 270

                                                                       
Query: 391 catacgttccggggtactggaggagatccctttggtgcacctacgaagaactggccttgg 450
           ||||| ||||| || |||||||| ||||| ||||||||  |||| ||| | |||||||||
Sbjct: 271 catactttccgtgggactggaggtgatccatttggtgctgctactaagtattggccttgg 330

                                                                       
Query: 451 gaggatggcaccaattccttggccatggctaagagaagaatgaaagctcacttcgagttc 510
           || ||||| || || ||  || | ||||||||||||||||||| |||| |||| ||||||
Sbjct: 331 gaagatggtactaactctgtgtctatggctaagagaagaatgagagctaactttgagttc 390

                                                                       
Query: 511 atggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggc 570
            || |||| |||||||||||  ||||||| || |||||||| ||||| || |||||||||
Sbjct: 391 ttgaagaaacttggagttgattggtggtgttttcatgacagagacatagcacctgatggc 450

            
Query: 571 a 571
           |
Sbjct: 451 a 451

---

>emb|BX831279.1|CNS09ZCJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS74ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1649

 Score =  184 bits (93), Expect = 2e-43
 Identities = 249/301 (82%)
 Strand = Plus / Plus

                                                                       
Query: 271 aagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggtataacgcg 330
           ||||| || |||||||| ||| | || ||||| || ||| |||||| |||||||||||| 
Sbjct: 239 aagattaagtatgagggaccttcgagtaagaacccacttgcttacaggtggtataacgct 298

                                                                       
Query: 331 gaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggcgttttgg 390
           || |||| ||| || || ||||||||||||||||||||  | ||||| || |||||||||
Sbjct: 299 gaagaagagattcttgggaagaaaatgaaggattggtttagattcagtgttgcgttttgg 358

                                                                       
Query: 391 catacgttccggggtactggaggagatccctttggtgcacctacgaagaactggccttgg 450
           ||||| ||||| || |||||||| ||||| ||||||||  |||| ||| | |||||||||
Sbjct: 359 catactttccgtgggactggaggtgatccatttggtgctgctactaagtattggccttgg 418

                                                                       
Query: 451 gaggatggcaccaattccttggccatggctaagagaagaatgaaagctcacttcgagttc 510
           || ||||| || || ||  || | ||||||||||||||||||| |||| |||| ||||||
Sbjct: 419 gaagatggtactaactctgtgtctatggctaagagaagaatgagagctaactttgagttc 478

                                                                       
Query: 511 atggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggc 570
            || |||| |||||||||||  ||||||| || |||||||| ||||| || |||||||||
Sbjct: 479 ttgaagaaacttggagttgattggtggtgttttcatgacagagacatagcacctgatggc 538

            
Query: 571 a 571
           |
Sbjct: 539 a 539

---

>gb|AY084958.1| Arabidopsis thaliana clone 122798 mRNA, complete sequence
          Length = 1649

 Score =  178 bits (90), Expect = 1e-41
 Identities = 228/274 (83%)
 Strand = Plus / Plus

                                                                       
Query: 298 aagaagccgctttcttacaagtggtataacgcggaggaagtgatcctcggaaagaaaatg 357
           ||||| || ||| |||||| |||||||||||| || |||| ||| || || |||||||||
Sbjct: 195 aagaacccacttgcttacaggtggtataacgctgaagaagagattcttgggaagaaaatg 254

                                                                       
Query: 358 aaggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagat 417
           |||||||||||  | ||||| || |||||||||||||| ||||| || |||||||| |||
Sbjct: 255 aaggattggtttagattcagtgttgcgttttggcatactttccgtgggactggaggtgat 314

                                                                       
Query: 418 ccctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatg 477
           || ||||||||  |||| ||| | ||||||||||| ||||| || || ||  || | |||
Sbjct: 315 ccatttggtgctgctactaagtattggccttgggaagatggtactaactctgtgtctatg 374

                                                                       
Query: 478 gctaagagaagaatgaaagctcacttcgagttcatggagaagcttggagttgaaaggtgg 537
           |||||||||||||||| |||| |||| |||||| || |||| |||||||||||  |||||
Sbjct: 375 gctaagagaagaatgagagctaactttgagttcttgaagaaacttggagttgattggtgg 434

                                             
Query: 538 tgcttccatgacagggacatcgcccctgatggca 571
           || || |||||||| ||||| || ||||||||||
Sbjct: 435 tgttttcatgacagagacatagcacctgatggca 468

---

>gb|AY084800.1| Arabidopsis thaliana clone 118282 mRNA, complete sequence
          Length = 1838

 Score =  176 bits (89), Expect = 6e-41
 Identities = 248/301 (82%)
 Strand = Plus / Plus

                                                                       
Query: 271 aagatcaactatgagggtcctaccagcaagaagccgctttcttacaagtggtataacgcg 330
           ||||| || |||||||| ||| | || ||||| || ||| |||||| |||||||||||| 
Sbjct: 305 aagattaagtatgagggaccttcgagtaagaacccacttgcttacaggtggtataacgct 364

                                                                       
Query: 331 gaggaagtgatcctcggaaagaaaatgaaggattggttgcggttcagcgtggcgttttgg 390
           || |||| ||| || || ||||||||||||||||||||  | ||||| || |||||||||
Sbjct: 365 gaagaagagattcttgggaagaaaatgaaggattggtttagattcagtgttgcgttttgg 424

                                                                       
Query: 391 catacgttccggggtactggaggagatccctttggtgcacctacgaagaactggccttgg 450
           ||||| ||||| || |||||||| ||||| ||||||||  |||| ||| | |||||||||
Sbjct: 425 catactttccgtgggactggaggtgatccatttggtgctgctactaagtattggccttgg 484

                                                                       
Query: 451 gaggatggcaccaattccttggccatggctaagagaagaatgaaagctcacttcgagttc 510
           || ||||| || || ||  || | ||||||||||||||||||| |||| |||| ||||||
Sbjct: 485 gaagatggtactaactctgtgtctatggctaagagaagaatgagagctaactttgagttc 544

                                                                       
Query: 511 atggagaagcttggagttgaaaggtggtgcttccatgacagggacatcgcccctgatggc 570
            || |||| |||||||||||   |||||| || |||||||| ||||| || |||||||||
Sbjct: 545 ttgaagaaacttggagttgattagtggtgttttcatgacagagacatagcacctgatggc 604

            
Query: 571 a 571
           |
Sbjct: 605 a 605

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  167 bits (84), Expect = 5e-38
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                            
Query: 359      aggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagatc 418
                |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 28222059 aggattggatgcggttcagcgtggccttttggcatacgttccgtggtactggaggagatc 28222000

                                                                            
Query: 419      cctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatgg 478
                | |||||||| ||||| |||   |||||||||||||||||||| ||||| |||| |||||
Sbjct: 28221999 cttttggtgcccctacaaagtcttggccttgggaggatggcacaaattcgttggacatgg 28221940

                            
Query: 479      ctaagagaagaa 490
                ||||||||||||
Sbjct: 28221939 ctaagagaagaa 28221928



 Score =  137 bits (69), Expect = 5e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                            
Query: 495      agctcacttcgagttcatggagaagcttggagttgaaaggtggtgcttccatgacaggga 554
                ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 28221829 agctcactttgagttcatggagaagcttggagttgacaggtggtgcttccatgacaggga 28221770

                                         
Query: 555      catcgcccctgatggcaaaacactc 579
                 || |||||||||||||||||||||
Sbjct: 28221769 tattgcccctgatggcaaaacactc 28221745



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                            
Query: 284      agggtcctaccagcaagaagccgctttcttacaagtggtataacgcggaggaagtgatcc 343
                ||||||| | ||||||||| |||||| ||||||||||||| || || ||||||||||| |
Sbjct: 28222232 agggtccaagcagcaagaacccgcttgcttacaagtggtacaatgctgaggaagtgattc 28222173

                                  
Query: 344      tcggaaagaaaatgaagg 361
                | || ||||| |||||||
Sbjct: 28222172 ttgggaagaagatgaagg 28222155



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 598      ttggatgagatagttgagctggcaaag 624
                ||||||||||||||||| |||||||||
Sbjct: 28221306 ttggatgagatagttgaactggcaaag 28221280



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 238      gattgggagggcgagttcttccccggcattgcaaagatcaactatgagg 286
                |||||||| || ||||||||||| |||||  | |||||||| |||||||
Sbjct: 28222480 gattgggaaggggagttcttccctggcatccccaagatcaagtatgagg 28222432

---

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score =  167 bits (84), Expect = 5e-38
 Identities = 120/132 (90%)
 Strand = Plus / Minus

                                                                         
Query: 359   aggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagatc 418
             |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 77604 aggattggatgcggttcagcgtggccttttggcatacgttccgtggtactggaggagatc 77545

                                                                         
Query: 419   cctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatgg 478
             | |||||||| ||||| |||   |||||||||||||||||||| ||||| |||| |||||
Sbjct: 77544 cttttggtgcccctacaaagtcttggccttgggaggatggcacaaattcgttggacatgg 77485

                         
Query: 479   ctaagagaagaa 490
             ||||||||||||
Sbjct: 77484 ctaagagaagaa 77473



 Score =  137 bits (69), Expect = 5e-29
 Identities = 81/85 (95%)
 Strand = Plus / Minus

                                                                         
Query: 495   agctcacttcgagttcatggagaagcttggagttgaaaggtggtgcttccatgacaggga 554
             ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 77374 agctcactttgagttcatggagaagcttggagttgacaggtggtgcttccatgacaggga 77315

                                      
Query: 555   catcgcccctgatggcaaaacactc 579
              || |||||||||||||||||||||
Sbjct: 77314 tattgcccctgatggcaaaacactc 77290



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                         
Query: 284   agggtcctaccagcaagaagccgctttcttacaagtggtataacgcggaggaagtgatcc 343
             ||||||| | ||||||||| |||||| ||||||||||||| || || ||||||||||| |
Sbjct: 77777 agggtccaagcagcaagaacccgcttgcttacaagtggtacaatgctgaggaagtgattc 77718

                               
Query: 344   tcggaaagaaaatgaagg 361
             | || ||||| |||||||
Sbjct: 77717 ttgggaagaagatgaagg 77700



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 598   ttggatgagatagttgagctggcaaag 624
             ||||||||||||||||| |||||||||
Sbjct: 76851 ttggatgagatagttgaactggcaaag 76825



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 238   gattgggagggcgagttcttccccggcattgcaaagatcaactatgagg 286
             |||||||| || ||||||||||| |||||  | |||||||| |||||||
Sbjct: 78025 gattgggaaggggagttcttccctggcatccccaagatcaagtatgagg 77977

---

>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 109/132 (82%)
 Strand = Plus / Plus

                                                                         
Query: 359   aggattggttgcggttcagcgtggcgttttggcatacgttccggggtactggaggagatc 418
             ||||||||||  | ||||| || |||||||||||||| ||||| || |||||||| ||||
Sbjct: 78532 aggattggtttagattcagtgttgcgttttggcatactttccgtgggactggaggtgatc 78591

                                                                         
Query: 419   cctttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatgg 478
             | ||||||||  |||| ||| | ||||||||||| ||||| || || ||  || | ||||
Sbjct: 78592 catttggtgctgctactaagtattggccttgggaagatggtactaactctgtgtctatgg 78651

                         
Query: 479   ctaagagaagaa 490
             ||||||||||||
Sbjct: 78652 ctaagagaagaa 78663



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                         
Query: 495   agctcacttcgagttcatggagaagcttggagttgaaaggtggtgcttccatgacaggga 554
             |||| |||| |||||| || |||| |||||||||||  ||||||| || |||||||| ||
Sbjct: 78752 agctaactttgagttcttgaagaaacttggagttgattggtggtgttttcatgacagaga 78811

                              
Query: 555   catcgcccctgatggca 571
             ||| || ||||||||||
Sbjct: 78812 catagcacctgatggca 78828



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 298   aagaagccgctttcttacaagtggtataacgcggaggaagtgatcctcggaaagaaaatg 357
             ||||| || ||| |||||| |||||||||||| || |||| ||| || || |||||||||
Sbjct: 78360 aagaacccacttgcttacaggtggtataacgctgaagaagagattcttgggaagaaaatg 78419

                 
Query: 358   aagg 361
             ||||
Sbjct: 78420 aagg 78423

---

>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                         
Query: 421   tttggtgcacctacgaagaactggccttgggaggatggcaccaattccttggccatggct 480
             |||||||||||||| ||  | ||||| ||||| ||||| |||||||| ||   |||||||
Sbjct: 88436 tttggtgcacctaccaaatattggccatgggaagatggtaccaattcattaagcatggct 88377

                       
Query: 481   aagagaagaa 490
             || |||||||
Sbjct: 88376 aaaagaagaa 88367

---

>dbj|AK104085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-F02, full
           insert sequence
          Length = 1177

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 599 tggatgagatagttgagctggcaaag 624
           |||||||||||||||| |||||||||
Sbjct: 1   tggatgagatagttgaactggcaaag 26

---

>gb|AF045552.1|AF045552 Lactobacillus brevis xyl operon and xylose isomerase (xylA),
            xylulokinase (xylB), and D-xylose proton-symporter (xylT)
            genes, complete cds
          Length = 5957

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 349  aagaaaatgaaggattggttgcggtt 374
            |||||||||||||||||||| |||||
Sbjct: 1382 aagaaaatgaaggattggttacggtt 1407

---

>gb|M84564.1|LBAXYLA Lactobacillus xylose isomerase (xylA) gene, complete cds
          Length = 2220

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 349 aagaaaatgaaggattggttgcggtt 374
           |||||||||||||||||||| |||||
Sbjct: 516 aagaaaatgaaggattggttacggtt 541

---

>emb|AL449266.17| Human DNA sequence from clone RP11-475E11 on chromosome 1 Contains the 3'
              end of the STXBP3 gene for syntaxin binding protein 3, a
              novel gene (MGC26989), a novel gene, the gene for LGN
              protein, the gene for Mid-1-related chloride channel 1
              (MCLC) and the 3' end of novel gene (KIAA0893), complete
              sequence
          Length = 182553

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 159    ctgcctgtccgccgcggttgc 179
              |||||||||||||||||||||
Sbjct: 172035 ctgcctgtccgccgcggttgc 172015

---

>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence
          Length = 117100

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 283    gagggtcctaccagcaagaag 303
              |||||||||||||||||||||
Sbjct: 107861 gagggtcctaccagcaagaag 107841

---

>gb|AC069181.9| Homo sapiens chromosome 8, clone RP11-200A24, complete sequence
          Length = 139409

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   gagggtcctaccagcaagaag 303
             |||||||||||||||||||||
Sbjct: 93220 gagggtcctaccagcaagaag 93240

---

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 246     gggcgagttcttccccggcat 266
               |||||||||||||||||||||
Sbjct: 2305647 gggcgagttcttccccggcat 2305667

---

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 131     tcctggtcctgctgctggcct 151
               |||||||||||||||||||||
Sbjct: 2496606 tcctggtcctgctgctggcct 2496586

---

>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete
             sequence
          Length = 158699

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 283   gagggtcctaccagcaagaag 303
             |||||||||||||||||||||
Sbjct: 88500 gagggtcctaccagcaagaag 88520

---

>gb|U82478.1|BGU82478 Biomphalaria glabrata fibrinogen-related protein 4 (BgMFREP4) mRNA,
            partial cds
          Length = 1372

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 479  ctaagagaagaatgaaagct 498
            ||||||||||||||||||||
Sbjct: 1241 ctaagagaagaatgaaagct 1260

---

>gb|AC118747.5| Mus musculus chromosome 5, clone RP24-194J1, complete sequence
          Length = 166351

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    ctaagagaagaatgaaagct 498
              ||||||||||||||||||||
Sbjct: 102728 ctaagagaagaatgaaagct 102747

---

>gb|AC132088.4| Mus musculus BAC clone RP24-410M8 from chromosome 19, complete sequence
          Length = 159681

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   agctcctggtcctgctgctg 147
             ||||||||||||||||||||
Sbjct: 25602 agctcctggtcctgctgctg 25583

---

>gb|AC134830.2| Mus musculus BAC clone RP24-498G16 from chromosome 19, complete
             sequence
          Length = 155666

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   agctcctggtcctgctgctg 147
             ||||||||||||||||||||
Sbjct: 32257 agctcctggtcctgctgctg 32276

---

>gb|AC126428.3| Mus musculus BAC clone RP24-387B13 from chromosome 10, complete sequence
          Length = 225663

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    aactggccttgggaggatgg 458
              ||||||||||||||||||||
Sbjct: 172825 aactggccttgggaggatgg 172844

---

>emb|CR936913.7| Human DNA sequence from clone DAAP-27A1 on chromosome 6, complete
             sequence
          Length = 99908

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 83595 cgttccggggtactggagga 83614

---

>ref|XM_815454.1| Trypanosoma cruzi strain CL Brener transcription factor
           (Tc00.1047053507093.180) partial mRNA
          Length = 1809

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 485 gaagaatgaaagctcacttc 504
           ||||||||||||||||||||
Sbjct: 810 gaagaatgaaagctcacttc 829

---

>gb|AC121961.2| Mus musculus BAC clone RP24-255E8 from 10, complete sequence
          Length = 162752

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   aactggccttgggaggatgg 458
             ||||||||||||||||||||
Sbjct: 18131 aactggccttgggaggatgg 18150

---

>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence
          Length = 141028

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 583    gaaacaaatgctaacttggatgag 606
              |||||||||||||| |||||||||
Sbjct: 137351 gaaacaaatgctaagttggatgag 137328

---

>emb|Z96104.1|HSO27 Human DNA sequence from clone XX-O27 on chromosome 6 Contains the BRD2
             gene encoding bromodomain-containing 2 protein, the
             HLA-DMA gene encoding major histocompatibility complex
             class II DM alpha, two CpG islands, ESTs, STSs and GSSs,
             complete sequence
          Length = 38902

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 36829 cgttccggggtactggagga 36810

---

>emb|BX088556.11| Human DNA sequence from clone DASS-67H14 on chromosome 6, complete
              sequence
          Length = 114576

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    cgttccggggtactggagga 414
              ||||||||||||||||||||
Sbjct: 110161 cgttccggggtactggagga 110180

---

>emb|AL935042.6| Human DNA sequence from clone DAQB-96B10 on chromosome 6 Contains the
             HLA-Z pseudogene for major histocompatibility complex,
             class I, Z, the HLA-DMB gene for major histocompatibility
             complex, class II, DM beta, the HLA-DMA gene for major
             histocompatibility complex, class II, DM alpha, the 5' end
             of the BRD2 gene for bromodomain containing 2 and 3 CpG
             islands, complete sequence
          Length = 95788

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 68109 cgttccggggtactggagga 68128

---

>emb|AL645941.11| Human DNA sequence from clone XXbac-181M17 on chromosome 6 contains the
             HLA-DMB gene for major histocompatibility complex, class
             II, DM beta, the HLA-DMA gene for major histocompatibility
             complex, class II, DM alpha, the BRD2 gene for bromodomain
             containing 2 and two CpG islands, complete sequence
          Length = 71501

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 26825 cgttccggggtactggagga 26844

---

>emb|AL662845.5| Human DNA sequence from clone XXbac-136A3 on chromosome 6 contains the
             HLA-DMB gene for major histocompatibility complex, class
             II, DM beta, the HLA-DMA gene for major histocompatibility
             complex, class II, DM alpha, the BRD2 gene for bromodomain
             containing 2, the HLA-DOA gene for major
             histocompatibility complex, class II, DO alpha and two CpG
             islands, complete sequence
          Length = 97128

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 26830 cgttccggggtactggagga 26849

---

>emb|AL591470.12| Human DNA sequence from clone RP11-263I4 on chromosome 9 Contains the
             3' end of a novel gene (KIAA0967), complete sequence
          Length = 60610

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   ggagctcctggtcctgctgc 145
             ||||||||||||||||||||
Sbjct: 34903 ggagctcctggtcctgctgc 34922

---

>emb|AL163538.9| Human DNA sequence from clone RP11-323P14 on chromosome 13 Contains
             part of the WASF3 gene for the WAS protein family, member
             3 (WASP family Verprolin-homologous protein 3 (SCAR3,
             Scar3, WAVE3, KIAA0900)) and a novel gene, complete
             sequence
          Length = 84193

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   ccttgggaggatggcaccaa 464
             ||||||||||||||||||||
Sbjct: 46992 ccttgggaggatggcaccaa 47011

---

>emb|AL157934.17| Human DNA sequence from clone RP11-449M9 on chromosome Xq13.1-13.3
             Contains the 3' end of the SLC16A2 gene for solute carrier
             family 16 member 2 and two CpG islands, complete sequence
          Length = 106497

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   gctcctggtcctgctgctggcctc 152
             |||||||||||||| |||||||||
Sbjct: 61513 gctcctggtcctgccgctggcctc 61536

---

>emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 on chromosome 6p22.1-22.3
             Contains part of a novel gene, complete sequence
          Length = 103268

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   atggctaagagaagaatgaa 494
             ||||||||||||||||||||
Sbjct: 85998 atggctaagagaagaatgaa 85979

---

>emb|Z37112.2|BBCYAAG Bordetella bronchiseptica cyaA gene for adenylate cyclase hemolysin
          Length = 5334

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 207  cggcgccaagtgcgccgatgccgcctcc 234
            |||||||||  |||||||||||||||||
Sbjct: 1738 cggcgccaacggcgccgatgccgcctcc 1711

---

>emb|X76775.1|HSHLADMAG H.sapiens HLA-DMA gene
          Length = 5190

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 395  cgttccggggtactggagga 414
            ||||||||||||||||||||
Sbjct: 4422 cgttccggggtactggagga 4403

---

>emb|AJ249909.1|PSP249909 Piromyces sp. E2 mRNA for xylose isomerase (xylA gene)
          Length = 1669

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 349 aagaaaatgaaggattggtt 368
           ||||||||||||||||||||
Sbjct: 113 aagaaaatgaaggattggtt 132

---

>emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chromosome 11 Contains a
              novel gene, a glyoxalase 1 (Glo1) pseudogene and a
              pseudogene similar to part of nuclear pore membrane protein
              121 Pom121, complete sequence
          Length = 212255

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    agaaaatgaaggattggttg 369
              ||||||||||||||||||||
Sbjct: 197450 agaaaatgaaggattggttg 197469

---

>emb|CR759798.3| Human DNA sequence from clone DAMC-226H3 on chromosome 6, complete
             sequence
          Length = 118408

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 88076 cgttccggggtactggagga 88095

---

>emb|CR752645.3| Human DNA sequence from clone DADB-223G19 on chromosome 6, complete
             sequence
          Length = 95556

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   cgttccggggtactggagga 414
             ||||||||||||||||||||
Sbjct: 87520 cgttccggggtactggagga 87539

---

>gb|AC109515.6| Homo sapiens chromosome 17, clone CTD-2503K16, complete sequence
          Length = 144448

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 122  gcggggagctcctggtcctg 141
            ||||||||||||||||||||
Sbjct: 6160 gcggggagctcctggtcctg 6141

---

>dbj|D14281.1|STMPSN22 Streptomyces flavovirens plasmid pSN22 DNA, complete sequence
          Length = 10992

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 gctcctggtcctgctgctgg 148
           ||||||||||||||||||||
Sbjct: 153 gctcctggtcctgctgctgg 134

---

>gb|AE010214.1| Pyrococcus furiosus DSM 3638, section 89 of 173 of the complete genome
          Length = 11615

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   ggagaagcttggagttgaaa 532
             ||||||||||||||||||||
Sbjct: 11261 ggagaagcttggagttgaaa 11242

---

>emb|BX908719.9| Human DNA sequence from clone DAMA-147C13 on chromosome 6, complete
            sequence
          Length = 36230

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 395  cgttccggggtactggagga 414
            ||||||||||||||||||||
Sbjct: 7760 cgttccggggtactggagga 7779

---

>gb|AC127537.7| Homo sapiens chromosome 17, clone RP1-178F10, complete sequence
          Length = 131302

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  gcggggagctcctggtcctg 141
            ||||||||||||||||||||
Sbjct: 7706 gcggggagctcctggtcctg 7725

---

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 194     gcccggccgacatcggcgcc 213
               ||||||||||||||||||||
Sbjct: 1393689 gcccggccgacatcggcgcc 1393708

---

>dbj|AP003783.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-598K3, complete
             sequence
          Length = 172763

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   tggccatggctaagagaaga 489
             ||||||||||||||||||||
Sbjct: 75396 tggccatggctaagagaaga 75377

---

>dbj|AP001648.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736L3, complete
              sequence
          Length = 166013

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    tggccatggctaagagaaga 489
              ||||||||||||||||||||
Sbjct: 125294 tggccatggctaagagaaga 125275

---

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 194     gcccggccgacatcggcgcc 213
               ||||||||||||||||||||
Sbjct: 3724443 gcccggccgacatcggcgcc 3724424

---

>emb|AL035367.5|HSF10178 Homo sapiens chromosome 17 sequence from PAC RP1-178F10 region
            D17S842-D17S953 map 17p11.2, complete sequence
          Length = 132486

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  gcggggagctcctggtcctg 141
            ||||||||||||||||||||
Sbjct: 8892 gcggggagctcctggtcctg 8911

---

>emb|X87344.1|HSEVMHC H.sapiens DMA, DMB, HLA-Z1, IPP2, LMP2, TAP1, LMP7, TAP2, DOB, DQB2
            and RING8, 9, 13 and 14 genes
          Length = 198285

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 395  cgttccggggtactggagga 414
            ||||||||||||||||||||
Sbjct: 5113 cgttccggggtactggagga 5094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,556,293
Number of Sequences: 3902068
Number of extensions: 4556293
Number of successful extensions: 83713
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83253
Number of HSP's gapped (non-prelim): 452
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---