Clone Name | bah63n10 |
---|---|
Clone Library Name | barley_pub |
>HSF3_ARATH (O81821) Heat shock factor protein 3 (HSF 3) (Heat shock| transcription factor 3) (HSTF 3) Length = 481 Score = 57.4 bits (137), Expect = 3e-08 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 5/70 (7%) Frame = +3 Query: 123 IDDTQKLPGIIDSFWEQFLCAS-PLSVDNDEVDSGLLDTRE---AQEENGWTRTE-NLAN 287 ++ KLPGI D FWEQF P D D++ SG ++ + QE N WTR E + Sbjct: 407 LEGVPKLPGIQDPFWEQFFSVELPAIADTDDILSGSVENNDLVLEQEPNEWTRNEQQMKY 466 Query: 288 LTEQMGLLSS 317 LTEQMGLLSS Sbjct: 467 LTEQMGLLSS 476
>HSF2_ARATH (Q9SCW5) Heat shock factor protein 2 (HSF 2) (Heat shock| transcription factor 2) (HSTF 2) Length = 468 Score = 57.0 bits (136), Expect = 5e-08 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 8/97 (8%) Frame = +3 Query: 54 ECIFPLPEGSDDSVPMDPIDTDEIDDTQKLPGIIDSFWEQFLCASPLSVDNDEVDSG--- 224 EC+ P+ D ++ ++ +E+ LP + DSFWEQF+ SP+ + DE+ SG Sbjct: 373 ECLDPIMAVLDGALELEADTLNEL-----LPEVQDSFWEQFIGESPVIGETDELISGSVE 427 Query: 225 ---LLDTREAQE--ENGWTRTENLANLTEQMGLLSSN 320 +L+ E Q N W++ + + +LTEQMGLL+S+ Sbjct: 428 NELILEQLELQSTLSNVWSKNQQMNHLTEQMGLLTSD 464
>HSF8_LYCPE (P41153) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 52.0 bits (123), Expect = 1e-06 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Frame = +3 Query: 123 IDDTQKLPGIIDSFWEQFLCASPLSVDNDEVDSGLLDTREAQEE-NGWTRTENLANLTEQ 299 +D+ Q+ P + D FWE+FL SP S D +D + +T E + + NGW +T+N+ +LTEQ Sbjct: 457 LDEIQEFPSVGDPFWEKFL-QSPSSPDA-AMDDDISNTSETKPQINGWDKTQNMEHLTEQ 514 Query: 300 MG 305 MG Sbjct: 515 MG 516
>HSF8_LYCES (Q40152) Heat shock factor protein HSF8 (Heat shock transcription| factor 8) (HSTF 8) (Heat stress transcription factor) Length = 527 Score = 51.2 bits (121), Expect = 2e-06 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Frame = +3 Query: 123 IDDTQKLPGIIDSFWEQFLCASPLSVDNDEVDSGLLDTREAQEE-NGWTRTENLANLTEQ 299 +D+ ++ P + D FWE+FL SP S D +D + +T E + + NGW +T+N+ +LTEQ Sbjct: 457 LDEIEEFPSVGDPFWEKFL-QSPCSPDA-AMDDDISNTSETKPQINGWDKTQNMEHLTEQ 514 Query: 300 MG 305 MG Sbjct: 515 MG 516
>ARMX6_HUMAN (Q7L4S7) Protein ARMCX6| Length = 300 Score = 31.2 bits (69), Expect = 2.7 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +3 Query: 57 CIFPLPEGSDDSVPMDPIDTDEIDDTQKLPGIIDSFWEQF-LCASPLSVDNDEVDSGLLD 233 C++ L G DDS ++ +E DD Q+L W F A P + D D + G Sbjct: 23 CVYKLTIGRDDSEKLEEEGEEEWDDDQELDEEEPDIWFDFETMARPWTEDGDWTEPGAPG 82 Query: 234 TREAQEENG 260 E + G Sbjct: 83 GTEDRPSGG 91
>RP21_HUMAN (Q9H633) Ribonuclease P protein subunit p21 (EC 3.1.26.5) (RNaseP| protein p21) (Ribonucleoprotein V) Length = 154 Score = 30.0 bits (66), Expect = 6.0 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 10/101 (9%) Frame = +1 Query: 10 EELIFL*RTMQCLVLSVYSPYLKAVMTLFPWTPSTLMRSMTLR---SFRASLIPSGSSSF 180 + L FL + C++ P +A+ + +T T+ + + LR S + +L SS Sbjct: 12 QRLNFLYQAAHCVLAQ--DPENQALARFYCYTERTIAKRLVLRRDPSVKRTLCRGCSSLL 69 Query: 181 VPALYLLTTTR-------SIQVCWTHGKRKRRMDGPGPRTW 282 VP L R ++Q C T + +R ++ PG W Sbjct: 70 VPGLTCTQRQRRCRGQRWTVQTCLTCQRSQRFLNDPGHLLW 110
>CAPP_COREF (Q8RQL3) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 919 Score = 29.6 bits (65), Expect = 7.8 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = +3 Query: 72 PEGSDDSVPMDPIDTDEIDDTQKLPGIIDSFWEQFLCASPLSVDNDEVDSGLLDTREAQE 251 P GS D +P+ + IDD Q+ GI++ W+ L + L D V +L ++ + Sbjct: 525 PTGSVDVIPL----FETIDDLQRGAGILEELWDIDLYRNYLE-QRDNVQEVMLGYSDSNK 579 Query: 252 ENGW 263 + G+ Sbjct: 580 DGGY 583
>NUHM_NEUCR (P40915) NADH-ubiquinone oxidoreductase 24 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) Length = 263 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/61 (26%), Positives = 29/61 (47%) Frame = -3 Query: 480 RYKKIGILPRRFVDRHFTVQHDCVTINYMGFITRIDPRAP*ESVDVSKYLTLYGSTTAGP 301 +YKK ++P + + QH +I+ M + R+ P +V+ + T+Y T G Sbjct: 81 QYKKAAVMPLLDLGQR---QHGFCSISVMNEVARLLEMPPMRVYEVASFYTMYNRTPVGK 137 Query: 300 F 298 F Sbjct: 138 F 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,928,072 Number of Sequences: 219361 Number of extensions: 2177801 Number of successful extensions: 5865 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5638 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5855 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)