ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63n06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transpo... 1063 0.0
2ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative... 468 e-128
3dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128
4emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transpor... 444 e-121
5gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 geno... 379 e-102
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 379 e-102
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 379 e-102
8dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 6e-84
9ref|XM_464773.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
12dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
13dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
14gb|AY165599.1| Saccharum hybrid cultivar putative sugar transpor... 84 7e-13
15ref|NM_179234.1| Arabidopsis thaliana carbohydrate transporter/ ... 56 1e-04
16ref|NM_119696.4| Arabidopsis thaliana carbohydrate transporter/ ... 56 1e-04
17gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
18emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 56 1e-04
19emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, B... 56 1e-04
20gb|AY094465.1| Arabidopsis thaliana AT4g35300/F23E12_140 mRNA, c... 56 1e-04
21dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
22emb|AJ532570.1|ATH532570 Arabidopsis thaliana mRNA for monosacch... 56 1e-04
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
24gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 2.2
25emb|BX052001.1|CNS09CAD Single read from an extremity of a full-... 42 2.2
26emb|BX031022.1|CNS08W3M Single read from an extremity of a full-... 42 2.2
27emb|BX031021.1|CNS08W3L Single read from an extremity of a full-... 42 2.2
28emb|BX030896.1|CNS08W04 Single read from an extremity of a full-... 42 2.2
29emb|BX030895.1|CNS08W03 Single read from an extremity of a full-... 42 2.2
30emb|BX029431.1|CNS08UVF Single read from an extremity of a full-... 42 2.2
31emb|BX027025.1|CNS08T0L Single read from an extremity of a full-... 42 2.2
32emb|BX026002.1|CNS08S86 Single read from an extremity of a full-... 42 2.2
33gb|AE005947.1| Caulobacter crescentus CB15 section 273 of 359 of... 42 2.2
34ref|XM_575993.1| PREDICTED: Rattus norvegicus similar to XPA bin... 42 2.2
35gb|BC106038.1| Homo sapiens SRY (sex determining region Y)-box 1... 40 8.7
36ref|NM_005686.2| Homo sapiens SRY (sex determining region Y)-box... 40 8.7
37ref|XM_514121.1| PREDICTED: Pan troglodytes similar to type 1 di... 40 8.7
38gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
39gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosom... 40 8.7
40emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chro... 40 8.7
41emb|AL117372.35|HS1016A21 Human DNA sequence from clone RP5-1016... 40 8.7
42gb|BC040649.1| Homo sapiens SRY (sex determining region Y)-box 1... 40 8.7
43emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, B... 40 8.7
44gb|AC091941.3| Homo sapiens chromosome 5 clone RP11-334G8, compl... 40 8.7
45gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 40 8.7
46dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.7
47gb|AF149301.1|AF149301 Homo sapiens SOX13 gene, complete cds 40 8.7
48dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.7
49emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on ch... 40 8.7
50ref|XM_310191.2| Anopheles gambiae str. PEST ENSANGP00000011053 ... 40 8.7
51gb|AF116571.1|AF116571 Homo sapiens SRY-like DNA binding protein... 40 8.7
52gb|AF098915.1|AF098915 Homo sapiens type 1 diabetes autoantigen ... 40 8.7
53gb|AF083105.1|AF083105 Homo sapiens HMG box factor SOX-13 mRNA, ... 40 8.7
54emb|AL627229.10| Mouse DNA sequence from clone RP23-354L19 on ch... 40 8.7 
>emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene)
          Length = 2614

 Score = 1063 bits (536), Expect = 0.0
 Identities = 545/548 (99%)
 Strand = Plus / Plus

                                                                       
Query: 94  agcggagatcccgagttccggacgccgacgtcgggtggtaggattcggcggccatgtcgt 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  agcggagatcccgagttccggacgccgacgtcgggtggtaggattcggcggccatgtcgt 89

                                                                       
Query: 154 cgggcgccgtgctggtcgccatagcggcgtccattgggaacctgctgcaggggtgggata 213
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 90  cgggcgccgtgctggtcgccatagcggcgtccatcgggaacctgctgcaggggtgggata 149

                                                                       
Query: 214 atgcgaccattgcaggtgccgtcctgtacataaagaaggagttcagcctggagacccagc 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 atgcgaccattgcaggtgccgtcctgtacataaagaaggagttcagcctggagacccagc 209

                                                                       
Query: 274 ccttgatcgagggcctcatcgtggccatgtcgctcatcggggcgacggttatcacgacgt 333
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 210 ccttgatcgagggcctcatcgtggccatgtcgctcatcggagcgacggttatcacgacgt 269

                                                                       
Query: 334 tctccggggcggtggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcc 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tctccggggcggtggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcc 329

                                                                       
Query: 394 tctactttgtcagtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttgg 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tctactttgtcagtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttgg 389

                                                                       
Query: 454 ccaggctcatcgatgggttcggtatcggtttggcagtcacccttgtccctctgtacattt 513
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccaggctcatcgacgggttcggtatcggtttggcagtcacccttgtccctctgtacattt 449

                                                                       
Query: 514 cggagaccgccccgactgacattagagggctgctgaacacgctgccgcagttcagtgggt 573
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cggagaccgccccgactgacattagagggctgctgaacacgctgccgcagttcagtgggt 509

                                                                       
Query: 574 caggagggatgttcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctg 633
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 caggagggatgttcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctg 569

                   
Query: 634 actggaga 641
           ||||||||
Sbjct: 570 actggaga 577
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>ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative sugar transporter
           (OSJNBb0064P21.3), mRNA
          Length = 2438

 Score =  468 bits (236), Expect = e-128
 Identities = 445/514 (86%), Gaps = 3/514 (0%)
 Strand = Plus / Plus

                                                                       
Query: 127 ggtggtaggattcggcggccatgtcgtcgggcgccgtgctggtcgccatagcggcgtcca 186
           ||||||| |||||| |||||||| ||   |||||||||||||||||||| ||||| ||||
Sbjct: 154 ggtggtaagattcgccggccatggcg---ggcgccgtgctggtcgccatcgcggcctcca 210

                                                                       
Query: 187 ttgggaacctgctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataa 246
           | || ||| |||||||||| ||||||||||| |||||||||||||| || |||||||| |
Sbjct: 211 tcggcaacttgctgcagggctgggataatgcaaccattgcaggtgcggtactgtacatca 270

                                                                       
Query: 247 agaaggagttcagcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgc 306
           ||||||| |||| | || ||| | ||||| | ||||| ||||| ||||||||||||||||
Sbjct: 271 agaaggaattcaacttgcagagcgagccccttatcgaaggcctgatcgtggccatgtcgc 330

                                                                       
Query: 307 tcatcggggcgacggttatcacgacgttctccggggcggtggctgacgctgttggtaggc 366
           |||| ||||||||| | |||||||||||||| || || ||||||||  || |||||||||
Sbjct: 331 tcattggggcgacgatcatcacgacgttctctggagcagtggctgattcttttggtaggc 390

                                                                       
Query: 367 ggcccctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctctggg 426
           ||||| |||||||||| ||| |||||||||||||||| ||||| || |||||||| ||||
Sbjct: 391 ggcccatgctgatcgcgtcggctgtcctctactttgttagtgggctagtgatgctttggg 450

                                                                       
Query: 427 cgcccaacgtctatgtgttgctcttggccaggctcatcgatgggttcggtatcggtttgg 486
           |||| || || ||||||||||||||||| |||||||| || |||||||| ||||||||||
Sbjct: 451 cgccaaatgtgtatgtgttgctcttggcgaggctcattgacgggttcgggatcggtttgg 510

                                                                       
Query: 487 cagtcacccttgtccctctgtacatttcggagaccgccccgactgacattagagggctgc 546
           | ||||| ||||| ||  ||||||| || ||||| |||||||| ||||| ||||| ||||
Sbjct: 511 ctgtcacgcttgtaccattgtacatctctgagactgccccgacggacatcagaggactgc 570

                                                                       
Query: 547 tgaacacgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatggtgt 606
           | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 571 taaacacgctgccgcagttcagtgggtctggagggatgttcctttcatactgcatggtat 630

                                             
Query: 607 ttaccatgtccctcatgccgcagcctgactggag 640
           ||  ||||||||||||||| ||||| || |||||
Sbjct: 631 ttggcatgtccctcatgccacagccagattggag 664
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>dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100A10, full
           insert sequence
          Length = 2800

 Score =  468 bits (236), Expect = e-128
 Identities = 445/514 (86%), Gaps = 3/514 (0%)
 Strand = Plus / Plus

                                                                       
Query: 127 ggtggtaggattcggcggccatgtcgtcgggcgccgtgctggtcgccatagcggcgtcca 186
           ||||||| |||||| |||||||| ||   |||||||||||||||||||| ||||| ||||
Sbjct: 185 ggtggtaagattcgccggccatggcg---ggcgccgtgctggtcgccatcgcggcctcca 241

                                                                       
Query: 187 ttgggaacctgctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataa 246
           | || ||| |||||||||| ||||||||||| |||||||||||||| || |||||||| |
Sbjct: 242 tcggcaacttgctgcagggctgggataatgcaaccattgcaggtgcggtactgtacatca 301

                                                                       
Query: 247 agaaggagttcagcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgc 306
           ||||||| |||| | || ||| | ||||| | ||||| ||||| ||||||||||||||||
Sbjct: 302 agaaggaattcaacttgcagagcgagccccttatcgaaggcctgatcgtggccatgtcgc 361

                                                                       
Query: 307 tcatcggggcgacggttatcacgacgttctccggggcggtggctgacgctgttggtaggc 366
           |||| ||||||||| | |||||||||||||| || || ||||||||  || |||||||||
Sbjct: 362 tcattggggcgacgatcatcacgacgttctctggagcagtggctgattcttttggtaggc 421

                                                                       
Query: 367 ggcccctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctctggg 426
           ||||| |||||||||| ||| |||||||||||||||| ||||| || |||||||| ||||
Sbjct: 422 ggcccatgctgatcgcgtcggctgtcctctactttgttagtgggctagtgatgctttggg 481

                                                                       
Query: 427 cgcccaacgtctatgtgttgctcttggccaggctcatcgatgggttcggtatcggtttgg 486
           |||| || || ||||||||||||||||| |||||||| || |||||||| ||||||||||
Sbjct: 482 cgccaaatgtgtatgtgttgctcttggcgaggctcattgacgggttcgggatcggtttgg 541

                                                                       
Query: 487 cagtcacccttgtccctctgtacatttcggagaccgccccgactgacattagagggctgc 546
           | ||||| ||||| ||  ||||||| || ||||| |||||||| ||||| ||||| ||||
Sbjct: 542 ctgtcacgcttgtaccattgtacatctctgagactgccccgacggacatcagaggactgc 601

                                                                       
Query: 547 tgaacacgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatggtgt 606
           | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct: 602 taaacacgctgccgcagttcagtgggtctggagggatgttcctttcatactgcatggtat 661

                                             
Query: 607 ttaccatgtccctcatgccgcagcctgactggag 640
           ||  ||||||||||||||| ||||| || |||||
Sbjct: 662 ttggcatgtccctcatgccacagccagattggag 695
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>emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transporter (stp2 gene)
          Length = 2516

 Score =  444 bits (224), Expect = e-121
 Identities = 227/228 (99%)
 Strand = Plus / Plus

                                                                       
Query: 414 gtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcgatgggttc 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 290 gtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcgacgggttc 349

                                                                       
Query: 474 ggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgactgac 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccccgactgac 409

                                                                       
Query: 534 attagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctttct 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 attagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcctttct 469

                                                           
Query: 594 tactgcatggtgtttaccatgtccctcatgccgcagcctgactggaga 641
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tactgcatggtgtttaccatgtccctcatgccgcagcctgactggaga 517
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>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
             sequence
          Length = 142114

 Score =  379 bits (191), Expect = e-102
 Identities = 359/415 (86%)
 Strand = Plus / Plus

                                                                         
Query: 226   caggtgccgtcctgtacataaagaaggagttcagcctggagacccagcccttgatcgagg 285
             ||||||| || |||||||| |||||||| |||| | || ||| | ||||| | ||||| |
Sbjct: 35283 caggtgcggtactgtacatcaagaaggaattcaacttgcagagcgagccccttatcgaag 35342

                                                                         
Query: 286   gcctcatcgtggccatgtcgctcatcggggcgacggttatcacgacgttctccggggcgg 345
             |||| |||||||||||||||||||| ||||||||| | |||||||||||||| || || |
Sbjct: 35343 gcctgatcgtggccatgtcgctcattggggcgacgatcatcacgacgttctctggagcag 35402

                                                                         
Query: 346   tggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcctctactttgtca 405
             |||||||  || |||||||||||||| |||||||||| ||| |||||||||||||||| |
Sbjct: 35403 tggctgattcttttggtaggcggcccatgctgatcgcgtcggctgtcctctactttgtta 35462

                                                                         
Query: 406   gtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcg 465
             |||| || |||||||| |||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 35463 gtgggctagtgatgctttgggcgccaaatgtgtatgtgttgctcttggcgaggctcattg 35522

                                                                         
Query: 466   atgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 525
             | |||||||| ||||||||||| ||||| ||||| ||  ||||||| || ||||| ||||
Sbjct: 35523 acgggttcgggatcggtttggctgtcacgcttgtaccattgtacatctctgagactgccc 35582

                                                                         
Query: 526   cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 585
             |||| ||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 35583 cgacggacatcagaggactgctaaacacgctgccgcagttcagtgggtctggagggatgt 35642

                                                                    
Query: 586   tcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggag 640
             ||||||| ||||||||||| |||  ||||||||||||||| ||||| || |||||
Sbjct: 35643 tcctttcatactgcatggtatttggcatgtccctcatgccacagccagattggag 35697



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 154   cgggcgccgtgctggtcgccatagcggcgtccattgggaacctgctgcaggggtgggata 213
             |||||||||||||||||||||| ||||| ||||| || ||| |||||||||| |||||||
Sbjct: 34820 cgggcgccgtgctggtcgccatcgcggcctccatcggcaacttgctgcagggctgggata 34879

                              
Query: 214   atgcgaccattgcaggt 230
             |||| ||||||||||||
Sbjct: 34880 atgcaaccattgcaggt 34896
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  379 bits (191), Expect = e-102
 Identities = 359/415 (86%)
 Strand = Plus / Plus

                                                                            
Query: 226      caggtgccgtcctgtacataaagaaggagttcagcctggagacccagcccttgatcgagg 285
                ||||||| || |||||||| |||||||| |||| | || ||| | ||||| | ||||| |
Sbjct: 20529993 caggtgcggtactgtacatcaagaaggaattcaacttgcagagcgagccccttatcgaag 20530052

                                                                            
Query: 286      gcctcatcgtggccatgtcgctcatcggggcgacggttatcacgacgttctccggggcgg 345
                |||| |||||||||||||||||||| ||||||||| | |||||||||||||| || || |
Sbjct: 20530053 gcctgatcgtggccatgtcgctcattggggcgacgatcatcacgacgttctctggagcag 20530112

                                                                            
Query: 346      tggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcctctactttgtca 405
                |||||||  || |||||||||||||| |||||||||| ||| |||||||||||||||| |
Sbjct: 20530113 tggctgattcttttggtaggcggcccatgctgatcgcgtcggctgtcctctactttgtta 20530172

                                                                            
Query: 406      gtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcg 465
                |||| || |||||||| |||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 20530173 gtgggctagtgatgctttgggcgccaaatgtgtatgtgttgctcttggcgaggctcattg 20530232

                                                                            
Query: 466      atgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 525
                | |||||||| ||||||||||| ||||| ||||| ||  ||||||| || ||||| ||||
Sbjct: 20530233 acgggttcgggatcggtttggctgtcacgcttgtaccattgtacatctctgagactgccc 20530292

                                                                            
Query: 526      cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 585
                |||| ||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 20530293 cgacggacatcagaggactgctaaacacgctgccgcagttcagtgggtctggagggatgt 20530352

                                                                       
Query: 586      tcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggag 640
                ||||||| ||||||||||| |||  ||||||||||||||| ||||| || |||||
Sbjct: 20530353 tcctttcatactgcatggtatttggcatgtccctcatgccacagccagattggag 20530407



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 154      cgggcgccgtgctggtcgccatagcggcgtccattgggaacctgctgcaggggtgggata 213
                |||||||||||||||||||||| ||||| ||||| || ||| |||||||||| |||||||
Sbjct: 20529530 cgggcgccgtgctggtcgccatcgcggcctccatcggcaacttgctgcagggctgggata 20529589

                                 
Query: 214      atgcgaccattgcaggt 230
                |||| ||||||||||||
Sbjct: 20529590 atgcaaccattgcaggt 20529606
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  379 bits (191), Expect = e-102
 Identities = 359/415 (86%)
 Strand = Plus / Plus

                                                                            
Query: 226      caggtgccgtcctgtacataaagaaggagttcagcctggagacccagcccttgatcgagg 285
                ||||||| || |||||||| |||||||| |||| | || ||| | ||||| | ||||| |
Sbjct: 20541265 caggtgcggtactgtacatcaagaaggaattcaacttgcagagcgagccccttatcgaag 20541324

                                                                            
Query: 286      gcctcatcgtggccatgtcgctcatcggggcgacggttatcacgacgttctccggggcgg 345
                |||| |||||||||||||||||||| ||||||||| | |||||||||||||| || || |
Sbjct: 20541325 gcctgatcgtggccatgtcgctcattggggcgacgatcatcacgacgttctctggagcag 20541384

                                                                            
Query: 346      tggctgacgctgttggtaggcggcccctgctgatcgcctcgtctgtcctctactttgtca 405
                |||||||  || |||||||||||||| |||||||||| ||| |||||||||||||||| |
Sbjct: 20541385 tggctgattcttttggtaggcggcccatgctgatcgcgtcggctgtcctctactttgtta 20541444

                                                                            
Query: 406      gtggcctggtgatgctctgggcgcccaacgtctatgtgttgctcttggccaggctcatcg 465
                |||| || |||||||| |||||||| || || ||||||||||||||||| |||||||| |
Sbjct: 20541445 gtgggctagtgatgctttgggcgccaaatgtgtatgtgttgctcttggcgaggctcattg 20541504

                                                                            
Query: 466      atgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 525
                | |||||||| ||||||||||| ||||| ||||| ||  ||||||| || ||||| ||||
Sbjct: 20541505 acgggttcgggatcggtttggctgtcacgcttgtaccattgtacatctctgagactgccc 20541564

                                                                            
Query: 526      cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 585
                |||| ||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 20541565 cgacggacatcagaggactgctaaacacgctgccgcagttcagtgggtctggagggatgt 20541624

                                                                       
Query: 586      tcctttcttactgcatggtgtttaccatgtccctcatgccgcagcctgactggag 640
                ||||||| ||||||||||| |||  ||||||||||||||| ||||| || |||||
Sbjct: 20541625 tcctttcatactgcatggtatttggcatgtccctcatgccacagccagattggag 20541679



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 154      cgggcgccgtgctggtcgccatagcggcgtccattgggaacctgctgcaggggtgggata 213
                |||||||||||||||||||||| ||||| ||||| || ||| |||||||||| |||||||
Sbjct: 20540802 cgggcgccgtgctggtcgccatcgcggcctccatcggcaacttgctgcagggctgggata 20540861

                                 
Query: 214      atgcgaccattgcaggt 230
                |||| ||||||||||||
Sbjct: 20540862 atgcaaccattgcaggt 20540878
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>dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E10, full
           insert sequence
          Length = 2368

 Score =  319 bits (161), Expect = 6e-84
 Identities = 287/329 (87%)
 Strand = Plus / Plus

                                                                       
Query: 312 ggggcgacggttatcacgacgttctccggggcggtggctgacgctgttggtaggcggccc 371
           ||||||||| | |||||||||||||| || || ||||||||  || ||||||||||||||
Sbjct: 5   ggggcgacgatcatcacgacgttctctggagcagtggctgattcttttggtaggcggccc 64

                                                                       
Query: 372 ctgctgatcgcctcgtctgtcctctactttgtcagtggcctggtgatgctctgggcgccc 431
            |||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 65  atgctgatcgcgtcggctgtcctctactttgttagtgggctagtgatgctttgggcgcca 124

                                                                       
Query: 432 aacgtctatgtgttgctcttggccaggctcatcgatgggttcggtatcggtttggcagtc 491
           || || ||||||||||||||||| |||||||| || |||||||| ||||||||||| |||
Sbjct: 125 aatgtgtatgtgttgctcttggcgaggctcattgacgggttcgggatcggtttggctgtc 184

                                                                       
Query: 492 acccttgtccctctgtacatttcggagaccgccccgactgacattagagggctgctgaac 551
           || ||||| ||  ||||||| || ||||| |||||||| ||||| ||||| ||||| |||
Sbjct: 185 acgcttgtaccattgtacatctctgagactgccccgacggacatcagaggactgctaaac 244

                                                                       
Query: 552 acgctgccgcagttcagtgggtcaggagggatgttcctttcttactgcatggtgtttacc 611
           ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 245 acgctgccgcagttcagtgggtctggagggatgttcctttcatactgcatggtatttggc 304

                                        
Query: 612 atgtccctcatgccgcagcctgactggag 640
           |||||||||||||| ||||| || |||||
Sbjct: 305 atgtccctcatgccacagccagattggag 333
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>ref|XM_464773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2934

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                       
Query: 465 gatgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgcc 524
           ||||| ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || 
Sbjct: 605 gatggattcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagct 664

                                                                       
Query: 525 ccgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatg 584
           ||  | || || || ||  ||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 665 ccttcagagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatg 724

                                   
Query: 585 ttcctttcttactgcatggtgttt 608
           ||| | || |||||||||||||||
Sbjct: 725 ttcttgtcctactgcatggtgttt 748



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 168 gtcgccatagcggcgtccattgggaacctgctgcaggggtgggataatgcgaccattgca 227
           ||||| || ||||| ||||| || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 308 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 367

                                          
Query: 228 ggtgccgtcctgtacataaagaaggagttca 258
           ||||| || || |||||||||||||| ||||
Sbjct: 368 ggtgctgtactatacataaagaaggaattca 398
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                           
Query: 465     gatgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgcc 524
               ||||| ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || 
Sbjct: 7273727 gatggattcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagct 7273786

                                                                           
Query: 525     ccgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatg 584
               ||  | || || || ||  ||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 7273787 ccttcagagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatg 7273846

                                       
Query: 585     ttcctttcttactgcatggtgttt 608
               ||| | || |||||||||||||||
Sbjct: 7273847 ttcttgtcctactgcatggtgttt 7273870



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                           
Query: 168     gtcgccatagcggcgtccattgggaacctgctgcaggggtgggataatgcgaccattgca 227
               ||||| || ||||| ||||| || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 7272971 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 7273030

                  
Query: 228     ggt 230
               |||
Sbjct: 7273031 ggt 7273033
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>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                         
Query: 465   gatgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgcc 524
             ||||| ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || 
Sbjct: 49535 gatggattcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagct 49594

                                                                         
Query: 525   ccgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatg 584
             ||  | || || || ||  ||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 49595 ccttcagagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatg 49654

                                     
Query: 585   ttcctttcttactgcatggtgttt 608
             ||| | || |||||||||||||||
Sbjct: 49655 ttcttgtcctactgcatggtgttt 49678



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                         
Query: 168   gtcgccatagcggcgtccattgggaacctgctgcaggggtgggataatgcgaccattgca 227
             ||||| || ||||| ||||| || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 48779 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 48838

                
Query: 228   ggt 230
             |||
Sbjct: 48839 ggt 48841
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>dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132C18, full
           insert sequence
          Length = 2934

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                       
Query: 465 gatgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgcc 524
           ||||| ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || 
Sbjct: 604 gatggattcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagct 663

                                                                       
Query: 525 ccgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatg 584
           ||  | || || || ||  ||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 664 ccttcagagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatg 723

                                   
Query: 585 ttcctttcttactgcatggtgttt 608
           ||| | || |||||||||||||||
Sbjct: 724 ttcttgtcctactgcatggtgttt 747



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                       
Query: 168 gtcgccatagcggcgtccattgggaacctgctgcaggggtgggataatgcgaccattgca 227
           ||||| || ||||| ||||| || |||||||||||||| ||||| ||||| |||||||||
Sbjct: 307 gtcgcaatcgcggcctccatcggcaacctgctgcagggatgggacaatgccaccattgca 366

                                          
Query: 228 ggtgccgtcctgtacataaagaaggagttca 258
           ||||| || || |||||||||||||| ||||
Sbjct: 367 ggtgctgtactatacataaagaaggaattca 397
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>dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086B19, full
           insert sequence
          Length = 2378

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Plus

                                                                       
Query: 465 gatgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgcc 524
           ||||| ||||| ||||| ||||| ||||| ||||| ||| ||||||| || ||||| || 
Sbjct: 115 gatggattcggcatcggcttggctgtcacacttgtacctttgtacatctcagagacagct 174

                                                                       
Query: 525 ccgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatg 584
           ||  | || || || ||  ||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 175 ccttcagagatcaggggtttgctgaatacactgccacagttcagtgggtcaggagggatg 234

                                   
Query: 585 ttcctttcttactgcatggtgttt 608
           ||| | || |||||||||||||||
Sbjct: 235 ttcttgtcctactgcatggtgttt 258
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>gb|AY165599.1| Saccharum hybrid cultivar putative sugar transporter type 2a mRNA,
           complete cds
          Length = 2665

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 117/142 (82%)
 Strand = Plus / Plus

                                                                       
Query: 466 atgggttcggtatcggtttggcagtcacccttgtccctctgtacatttcggagaccgccc 525
           |||| |||||| |||| ||||| ||||| ||||| |||||||||||||| || || || |
Sbjct: 413 atggattcggtgtcggcttggctgtcactcttgttcctctgtacatttcagaaacagctc 472

                                                                       
Query: 526 cgactgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgt 585
           |  | || || |||||  ||||||| || ||||| ||||||||||||||||| |||||||
Sbjct: 473 ctccagagataagaggtttgctgaatacactgccacagttcagtgggtcaggggggatgt 532

                                 
Query: 586 tcctttcttactgcatggtgtt 607
           |  | || ||||||||||||||
Sbjct: 533 ttttgtcgtactgcatggtgtt 554
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>ref|NM_179234.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside
           transporter/ sugar porter AT4G35300 transcript variant
           AT4G35300.1 mRNA, complete cds
          Length = 2590

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 529 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 588
           |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| 
Sbjct: 574 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 633

                           
Query: 589 tttcttactgcatggt 604
           | |||||||| |||||
Sbjct: 634 tatcttactgtatggt 649
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>ref|NM_119696.4| Arabidopsis thaliana carbohydrate transporter/ sugar porter
           AT4G35300 transcript variant AT4G35300.2 mRNA, complete
           cds
          Length = 2591

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 529 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 588
           |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| 
Sbjct: 605 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 664

                           
Query: 589 tttcttactgcatggt 604
           | |||||||| |||||
Sbjct: 665 tatcttactgtatggt 680
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>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0094M06, complete sequence
          Length = 135583

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 198   ctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataaagaaggagttc 257
             |||||||| ||||| || || ||||| || || ||||| |||||||| |||  |||||||
Sbjct: 99207 ctgcagggatgggacaacgccaccatcgccggcgccgtgctgtacatcaagcgggagttc 99266

                                                                     
Query: 258   agcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgctcatcgg 313
               ||| ||||||||||||    | ||||||||| |||| |||||||| ||||||||
Sbjct: 99267 gccctcgagacccagcccgccgtggagggcctcgtcgtcgccatgtccctcatcgg 99322
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>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                         
Query: 529   ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 588
             |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| 
Sbjct: 63160 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 63101

                             
Query: 589   tttcttactgcatggt 604
             | |||||||| |||||
Sbjct: 63100 tatcttactgtatggt 63085
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>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone  F23E12 (ESSA project)
          Length = 86710

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 529   ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 588
             |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| 
Sbjct: 40191 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 40250

                             
Query: 589   tttcttactgcatggt 604
             | |||||||| |||||
Sbjct: 40251 tatcttactgtatggt 40266
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>gb|AY094465.1| Arabidopsis thaliana AT4g35300/F23E12_140 mRNA, complete cds
          Length = 2570

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 529 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 588
           |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| 
Sbjct: 588 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 647

                           
Query: 589 tttcttactgcatggt 604
           | |||||||| |||||
Sbjct: 648 tatcttactgtatggt 663
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                            
Query: 198      ctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataaagaaggagttc 257
                |||||||| ||||| || || ||||| || || ||||| |||||||| |||  |||||||
Sbjct: 15926609 ctgcagggatgggacaacgccaccatcgccggcgccgtgctgtacatcaagcgggagttc 15926668

                                                                        
Query: 258      agcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgctcatcgg 313
                  ||| ||||||||||||    | ||||||||| |||| |||||||| ||||||||
Sbjct: 15926669 gccctcgagacccagcccgccgtggagggcctcgtcgtcgccatgtccctcatcgg 15926724
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>emb|AJ532570.1|ATH532570 Arabidopsis thaliana mRNA for monosaccharide sensing protein 2
           (mssp2 gene)
          Length = 2190

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                       
Query: 529 ctgacattagagggctgctgaacacgctgccgcagttcagtgggtcaggagggatgttcc 588
           |||| ||||| || ||| |||| ||||| |||||||||| ||| || |||||||||||| 
Sbjct: 380 ctgagattaggggactgttgaatacgctaccgcagttcactggctctggagggatgttct 439

                           
Query: 589 tttcttactgcatggt 604
           | |||||||| |||||
Sbjct: 440 tatcttactgtatggt 455
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                            
Query: 198      ctgcaggggtgggataatgcgaccattgcaggtgccgtcctgtacataaagaaggagttc 257
                |||||||| ||||| || || ||||| || || ||||| |||||||| |||  |||||||
Sbjct: 16013985 ctgcagggatgggacaacgccaccatcgccggcgccgtgctgtacatcaagcgggagttc 16014044

                                                                        
Query: 258      agcctggagacccagcccttgatcgagggcctcatcgtggccatgtcgctcatcgg 313
                  ||| ||||||||||||    | ||||||||| |||| |||||||| ||||||||
Sbjct: 16014045 gccctcgagacccagcccgccgtggagggcctcgtcgtcgccatgtccctcatcgg 16014100



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 139      cggcggccatgtcgtcgggc 158
                ||||||||||||||||||||
Sbjct: 20535910 cggcggccatgtcgtcgggc 20535929
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 372     ctgctgatcgcctcgtctgtc 392
               |||||||||||||||||||||
Sbjct: 2575149 ctgctgatcgcctcgtctgtc 2575169
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>emb|BX052001.1|CNS09CAD Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC29DD07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 325

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 6   cttactgcatggtgtttacgatgtc 30
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>emb|BX031022.1|CNS08W3M Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA46BB11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 900

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 302 cttactgcatggtgtttacgatgtc 326
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>emb|BX031021.1|CNS08W3L Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA46BB11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1019

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 835 cttactgcatggtgtttacgatgtc 811
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>emb|BX030896.1|CNS08W04 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA46AE06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 686

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 100 cttactgcatggtgtttacgatgtc 124
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>emb|BX030895.1|CNS08W03 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA46AE06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1004

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 841 cttactgcatggtgtttacgatgtc 817
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>emb|BX029431.1|CNS08UVF Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA43DH06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 952

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 820 cttactgcatggtgtttacgatgtc 796
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>emb|BX027025.1|CNS08T0L Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA40CB07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 912

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 284 cttactgcatggtgtttacgatgtc 308
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>emb|BX026002.1|CNS08S86 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA4AD06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 592 cttactgcatggtgtttaccatgtc 616
           ||||||||||||||||||| |||||
Sbjct: 286 cttactgcatggtgtttacgatgtc 310
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>gb|AE005947.1| Caulobacter crescentus CB15 section 273 of 359 of the complete genome
          Length = 10826

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 543   ctgctgaacacgctgccgcag 563
             |||||||||||||||||||||
Sbjct: 10269 ctgctgaacacgctgccgcag 10249
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>ref|XM_575993.1| PREDICTED: Rattus norvegicus similar to XPA binding protein 1
           (LOC500619), mRNA
          Length = 1470

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 529 ctgacattagagggctgctga 549
           |||||||||||||||||||||
Sbjct: 650 ctgacattagagggctgctga 670
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>gb|BC106038.1| Homo sapiens SRY (sex determining region Y)-box 13, mRNA (cDNA
           clone MGC:117216 IMAGE:6502746), complete cds
          Length = 4028

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 752 tcagcctggagacccagccc 771
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>ref|NM_005686.2| Homo sapiens SRY (sex determining region Y)-box 13 (SOX13), mRNA
          Length = 4088

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 733 tcagcctggagacccagccc 752
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>ref|XM_514121.1| PREDICTED: Pan troglodytes similar to type 1 diabetes autoantigen
           ICA12 (LOC457652), mRNA
          Length = 2502

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 405 tcagcctggagacccagccc 424
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>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0542B04, complete sequence
          Length = 182823

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   cggcggccatgtcgtcgggc 158
             ||||||||||||||||||||
Sbjct: 70183 cggcggccatgtcgtcgggc 70202
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>gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosome 1, complete sequence
          Length = 181902

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   tcagtggcctggtgatgctc 422
             ||||||||||||||||||||
Sbjct: 97072 tcagtggcctggtgatgctc 97091
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>emb|AL592146.8| Human DNA sequence from clone RP11-74C13 on chromosome 1 Contains the
             SOX13 gene for SOX13   SRY (sex determining region Y)-box
             13, two novel genes, a novel gene (FLJ10761), the 3' end
             of the REN gene for renin and two CpG islands, complete
             sequence
          Length = 101862

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tcagcctggagacccagccc 275
             ||||||||||||||||||||
Sbjct: 51896 tcagcctggagacccagccc 51915
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>emb|AL117372.35|HS1016A21 Human DNA sequence from clone RP5-1016A21 on chromosome 20 Contains ESTs,
              STSs and GSSs, complete sequence
          Length = 132859

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 568    gtgggtcaggagggatgttccttt 591
              ||||||||||||||| ||||||||
Sbjct: 117326 gtgggtcaggagggaggttccttt 117303
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>gb|BC040649.1| Homo sapiens SRY (sex determining region Y)-box 13, mRNA (cDNA
           clone IMAGE:4794944), complete cds
          Length = 3531

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 741 tcagcctggagacccagccc 760
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>emb|AL133452.1|ATF26O13 Arabidopsis thaliana DNA chromosome 3, BAC clone F26O13
          Length = 94349

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 199   tgcaggggtgggataatgcgaccattgcaggt 230
             ||||||| ||||| ||||| ||||||||||||
Sbjct: 53234 tgcagggctgggacaatgccaccattgcaggt 53203
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>gb|AC091941.3| Homo sapiens chromosome 5 clone RP11-334G8, complete sequence
          Length = 197701

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 588    ctttcttactgcatggtgtt 607
              ||||||||||||||||||||
Sbjct: 125916 ctttcttactgcatggtgtt 125897
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 11      aaagcttccggggttggcag 30
               ||||||||||||||||||||
Sbjct: 5409110 aaagcttccggggttggcag 5409129
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 541     ggctgctgaacacgctgccg 560
               ||||||||||||||||||||
Sbjct: 2738092 ggctgctgaacacgctgccg 2738073
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>gb|AF149301.1|AF149301 Homo sapiens SOX13 gene, complete cds
          Length = 12522

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 873 tcagcctggagacccagccc 892
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 138     tcggcggccatgtcgtcgggcgcc 161
               |||||||||||| |||||||||||
Sbjct: 3395351 tcggcggccatgccgtcgggcgcc 3395328
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>emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on chromosome 2, complete
              sequence
          Length = 146396

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    tcagtggcctggtgatgctc 422
              ||||||||||||||||||||
Sbjct: 139892 tcagtggcctggtgatgctc 139911
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>ref|XM_310191.2| Anopheles gambiae str. PEST ENSANGP00000011053 (ENSANGG00000008564),
            partial mRNA
          Length = 1741

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 593  ttactgcatggtgtttaccatgtc 616
            |||||||||||||||||| |||||
Sbjct: 1741 ttactgcatggtgtttacgatgtc 1718
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>gb|AF116571.1|AF116571 Homo sapiens SRY-like DNA binding protein (SOX13) mRNA, complete
           cds
          Length = 3577

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 246 tcagcctggagacccagccc 265
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>gb|AF098915.1|AF098915 Homo sapiens type 1 diabetes autoantigen ICA12 mRNA, complete cds
          Length = 3493

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 138 tcagcctggagacccagccc 157
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>gb|AF083105.1|AF083105 Homo sapiens HMG box factor SOX-13 mRNA, complete cds
          Length = 3583

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 tcagcctggagacccagccc 275
           ||||||||||||||||||||
Sbjct: 195 tcagcctggagacccagccc 214
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>emb|AL627229.10| Mouse DNA sequence from clone RP23-354L19 on chromosome 4, complete
              sequence
          Length = 149730

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    cagtggcctggtgatgctct 423
              ||||||||||||||||||||
Sbjct: 110620 cagtggcctggtgatgctct 110601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,210,089
Number of Sequences: 3902068
Number of extensions: 4210089
Number of successful extensions: 76449
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76067
Number of HSP's gapped (non-prelim): 381
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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