>CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2|
          Length = 544

 Score =  257 bits (657), Expect = 1e-68
 Identities = 130/170 (76%), Positives = 137/170 (80%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PYFKFGYMSANGAIAEAVKGEDRIHIIDFHI+QGAQWISLLQALAARPGGPPTVRITGID
Sbjct: 259 PYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGID 318

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXXXXXXXXXXXXALAVNFT 361
           DSVSAYA            SHIA LCKVPFEF  +A++               ALAVNFT
Sbjct: 319 DSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFT 378

Query: 362 LELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           LELHHIPDE+VSTANHRDR+LR+VK L PKVLTLVE ESNTNTAPFPQRF
Sbjct: 379 LELHHIPDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRF 428

>CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive protein 1|
          Length = 571

 Score =  191 bits (486), Expect = 8e-49
 Identities = 98/170 (57%), Positives = 116/170 (68%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PYFKFGYM+ANGAIAEA++ E+ IHIIDF IAQG QWI+L+QALAARPGGPP VRITGID
Sbjct: 286 PYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPRVRITGID 345

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXXXXXXXXXXXXALAVNFT 361
           D VS YA              ++   K+P EF  +++                AL+VNFT
Sbjct: 346 DPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFT 405

Query: 362 LELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           L+LHH PDE+V   N RD +LR+VKGL PKV TLVEQES+TNT PF  RF
Sbjct: 406 LQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRF 455

>GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (Restoration of growth on ammonia protein 2)
          Length = 533

 Score =  108 bits (271), Expect = 6e-24
 Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF ++QG QW +L+QALA RPGGPP  R+TGI 
Sbjct: 248 PYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGI- 306

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXXALAV 352
               A              +H+A    V FE+R      +A               ++AV
Sbjct: 307 -GPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAV 365

Query: 353 NFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           N   ELH +    +      D++L +V  ++P++ T+VEQESN N+  F  RF
Sbjct: 366 NSVFELHKL----LGRPGAIDKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRF 414

>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein)
          Length = 588

 Score =  107 bits (267), Expect = 2e-23
 Identities = 65/177 (36%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGI- 178
           PY KF + +AN AI EA  G +++H+IDF + QG QW +L+QALA RPGGPP  R+TGI 
Sbjct: 277 PYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPALMQALALRPGGPPAFRLTGIG 336

Query: 179 ---DDSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXX 340
               D+  A              + +A    V FEFR     ++A               
Sbjct: 337 PPQPDNTDA------LQQVGWKLAQLAETIGVEFEFRGFVANSLADLDATILDIRPSETE 390

Query: 341 ALAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           A+A+N   ELH +    +S     +++L  +K + PK++TLVEQE+N N   F  RF
Sbjct: 391 AVAINSVFELHRL----LSRPGAIEKVLNSIKQINPKIVTLVEQEANHNAGVFIDRF 443

>GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensitive mutant|
           protein 1) (VvGAI1)
          Length = 590

 Score =  107 bits (266), Expect = 2e-23
 Identities = 63/171 (36%), Positives = 92/171 (53%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF + QG QW +L+QALA RPGGPP+ R+TGI 
Sbjct: 292 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMKQGMQWPALMQALALRPGGPPSFRLTGI- 350

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRS-VAMAXXXXXXXXXXXXXXXALAVNF 358
               +              + +A    V FE+R  VA +               ++AVN 
Sbjct: 351 -GPPSTDNTDHLHEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRDGESVAVNS 409

Query: 359 TLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
             ELH +    ++     +R+L  VK ++P ++T+VEQE+N N   F  RF
Sbjct: 410 VFELHSL----LARPGGIERVLSAVKDMKPDIVTIVEQEANHNGPVFLDRF 456

>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)|
           (GAI-related sequence) (Restoration of growth on ammonia
           protein 1)
          Length = 587

 Score =  104 bits (259), Expect = 2e-22
 Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF + QG QW +L+QALA R GGPPT R+TGI 
Sbjct: 300 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGI- 358

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXXALAV 352
               A              + +A    V FE+R     ++A               A+AV
Sbjct: 359 -GPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAV 417

Query: 353 NFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           N   ELH +    +      +++L +VK ++P + T+VEQESN N   F  RF
Sbjct: 418 NSVFELHKL----LGRPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRF 466

>RGA1_BRACM (Q5BN23) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1)|
          Length = 573

 Score =  102 bits (255), Expect = 5e-22
 Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF + QG QW +L+QALA R GGPP+ R+TGI 
Sbjct: 287 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPSFRLTGI- 345

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXXALAV 352
               A              + +A    V FE+R     ++A               A+AV
Sbjct: 346 -GPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSETEAVAV 404

Query: 353 NFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           N   ELH +   T       +++  +VK ++P + T+VEQESN N   F  RF
Sbjct: 405 NSVFELHKLLGRTGGI----EKVFGVVKQIKPVIFTVVEQESNHNGPVFLDRF 453

>GAIP_CUCMA (Q6EI06) DELLA protein GAIP (Gibberellic acid-insensitive phloem|
           protein) (GAIP) (CmGAIP)
          Length = 579

 Score =  102 bits (254), Expect = 6e-22
 Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF + QG QW +L+QALA RP GPPT R+TGI 
Sbjct: 289 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALALRPSGPPTFRLTGI- 347

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXXALAV 352
               A                 A    V FE+R     ++A               ++ V
Sbjct: 348 -GPPAPDNSDYLQDVGWKLVKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVV 406

Query: 353 NFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           N   ELH +    ++     +++L +VK ++P+++T+VEQE+N N   F +RF
Sbjct: 407 NSVFELHQL----LARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVFVERF 455

>RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)|
          Length = 579

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF + QG QW +L+QALA R GGPP  R+TGI 
Sbjct: 293 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPVFRLTGI- 351

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXXALAV 352
               A              + +A    V FE+R     ++A               A+AV
Sbjct: 352 -GPPAADNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSEIEAVAV 410

Query: 353 NFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           N   ELH +   T       +++L +VK ++P + T+VEQES+ N   F  RF
Sbjct: 411 NSVFELHKLLGRTGGI----EKVLGVVKQIKPVIFTVVEQESSHNGPVFLDRF 459

>DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8)|
          Length = 630

 Score =  101 bits (252), Expect = 1e-21
 Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 7/177 (3%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA  G  R+H++DF I QG QW +LLQALA RPGGPP+ R+TG+ 
Sbjct: 324 PYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVG 383

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXX-------XXXXXXXXXX 340
                              +  A   +V F++R +  A                      
Sbjct: 384 PPQP--DETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGDDTDDEPE 441

Query: 341 ALAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
            +AVN   ELH +    ++     +++L  V+ +RP+++T+VEQE+N N+  F  RF
Sbjct: 442 VIAVNSVFELHRL----LAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRF 494

>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic|
           acid-insensitive mutant protein) (OsGAI)
          Length = 625

 Score =  101 bits (251), Expect = 1e-21
 Identities = 61/178 (34%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA  G  R+H++DF I QG QW +LLQALA RPGGPP+ R+TG+ 
Sbjct: 321 PYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVG 380

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXXXXXXXXXXXXA------ 343
                              +  A   +V F++R +  A               A      
Sbjct: 381 PPQP--DETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEADANEEP 438

Query: 344 --LAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
             +AVN   ELH +    ++     +++L  V  +RP+++T+VEQE+N N+  F  RF
Sbjct: 439 EVIAVNSVFELHRL----LAQPGALEKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRF 492

>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem|
           protein B) (GAIP-B) (CmGAIP-B)
          Length = 587

 Score =  100 bits (249), Expect = 2e-21
 Identities = 59/173 (34%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA +G+ R+H+IDF + QG QW +LLQALA RP GPP  R+TGI 
Sbjct: 296 PYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALLQALALRPSGPPAFRLTGI- 354

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXXALAV 352
               A              + +     V FE+R     ++A               ++ V
Sbjct: 355 -GPPAPDNSDYLQDVGWKLAKLVETINVEFEYRGFVANSLADLDASMLELRPSEVESVVV 413

Query: 353 NFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
           N   ELH +    ++     ++++ +VK ++P+++T+VEQE+N N   F  RF
Sbjct: 414 NSVFELHKL----LARPGAIEKVMSVVKQMKPEIMTVVEQEANHNGPVFMDRF 462

>RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein 1) (Protein|
           Rht-B1/Rht-D1)
          Length = 623

 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA  G  R+H++DF I QG QW +LLQALA RPGGPP+ R+TG+ 
Sbjct: 315 PYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVG 374

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXX--------XXXXXXXXXX 337
                              +  A   +V F++R +  A                      
Sbjct: 375 PPQP--DETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEP 432

Query: 338 XALAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
             +AVN   E+H +    ++     +++L  V+ +RP+++T+VEQE+N N+  F  RF
Sbjct: 433 EVIAVNSVFEMHRL----LAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGTFLDRF 486

>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)|
          Length = 618

 Score = 99.8 bits (247), Expect = 4e-21
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EA  G  R+H++DF I QG QW +LLQALA RPGGPP+ R+TG+ 
Sbjct: 311 PYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVG 370

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXX--------XXXXXXXXXX 337
                              +  A   +V F++R +  A                      
Sbjct: 371 PPQP--DETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEEDPNEEP 428

Query: 338 XALAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
             +AVN   E+H +    ++     +++L  V+ +RP+++T+VEQE+N N+  F  RF
Sbjct: 429 EVIAVNSVFEMHRL----LAQPGALEKVLGTVRAVRPRIVTVVEQEANHNSGSFLDRF 482

>RGL2_ARATH (Q8GXW1) DELLA protein RGL2 (RGA-like protein 2) (Scarecrow-like|
           protein 19)
          Length = 547

 Score = 98.2 bits (243), Expect = 1e-20
 Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EAV    R+H+ID  + QG QW +L+QALA RPGGPP+ R+TGI 
Sbjct: 263 PYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIG 322

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXX--XXXXXXXXXXALAVN 355
              +               +  A    V FEF+ +A                    L VN
Sbjct: 323 PPQT--ENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVN 380

Query: 356 FTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
              ELH +    ++ +   +++L  VK ++P ++T+VEQE+N N   F  RF
Sbjct: 381 SVFELHRL----LARSGSIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRF 428

>GAI_GOSHI (Q84TQ7) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (GhGAI)
          Length = 537

 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 61/177 (34%), Positives = 90/177 (50%), Gaps = 7/177 (3%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGI- 178
           PY KF + +AN AI EA     R+H+IDF + QG QW +L+QALA RPGGPP  R+TGI 
Sbjct: 249 PYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIG 308

Query: 179 ---DDSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSV---AMAXXXXXXXXXXXXXXX 340
               D+  A              + +A    + FEFR     ++A               
Sbjct: 309 PPQPDNTDA------LQQVGWKLAQLAERIGIEFEFRGFVANSLADLEPEMLDIRPPEIE 362

Query: 341 ALAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
            +AVN   ELH +    ++     ++++  +K ++PK++T+VEQE+N N   F  RF
Sbjct: 363 VVAVNAVFELHPL----LARPGGIEKVVSSIKAMKPKIVTVVEQEANHNGPVFLDRF 415

>RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)|
          Length = 511

 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI E     +++H+ID  +  G QW +L+QALA RP GPP  R+TGI 
Sbjct: 231 PYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIG 290

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAM--AXXXXXXXXXXXXXXXALAVN 355
            S++                 +A    V FEF+S+A+                  ++AVN
Sbjct: 291 YSLT------DIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVN 344

Query: 356 FTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
              ELH +    ++     D+ L  +K +RP ++T+VEQE+N N   F  RF
Sbjct: 345 SVFELHRL----LAHPGSIDKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRF 392

>RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3)|
          Length = 523

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KF + +AN AI EAV     +H+ID  + QG QW +L+QALA RPGGPP+ R+TG+ 
Sbjct: 236 PYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVG 295

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXX--XXXXXXXXXXALAVN 355
           +     +            + +A    V F+F  +                     L VN
Sbjct: 296 NP----SNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVN 351

Query: 356 FTLELHHIPDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
              ELH +    +S     +++L  VK ++P ++T+VEQE+N N   F  RF
Sbjct: 352 SVFELHPV----LSQPGSIEKLLATVKAVKPGLVTVVEQEANHNGDVFLDRF 399

>NSP2_MEDTR (Q5NE24) Nodulation signaling pathway 2 protein|
          Length = 508

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 5/175 (2%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGID 181
           PY KFG+ +AN AI EAV  E R+H+ID+ I +G QW SL+Q+LA+   G P +RIT + 
Sbjct: 217 PYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLIQSLASNNNG-PHLRITALS 275

Query: 182 DSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAM-AXXXXXXXXXXXXXXXALAVNF 358
            + +               +  A     PF F    + +               AL  N 
Sbjct: 276 RTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNC 335

Query: 359 TLELHHI----PDETVSTANHRDRILRLVKGLRPKVLTLVEQESNTNTAPFPQRF 511
            L L H+    P+   S  N         K L PK++TLVE+E  +    F +RF
Sbjct: 336 MLNLPHLSYRAPESVASFLNG-------AKTLNPKLVTLVEEEVGSVIGGFVERF 383

>MOC_ORYSA (Q84MM9) Protein MONOCULM 1|
          Length = 441

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 56/179 (31%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPG---GPPTVRIT 172
           P+ +F +++AN AI EAV G  R+HI+D     G QW  LLQA+A R     GPP VR+T
Sbjct: 135 PFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVT 194

Query: 173 GIDDSVSAYAXXXXXXXXXXXXSHIAGLCKVPFEFRSVAMAXXXXXXXXXXXXXXXALAV 352
           G      A A               A    +PF F  + ++               A A 
Sbjct: 195 G------AGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAAAA 248

Query: 353 NFT------LELHHIPDETVST---------ANHRD--RILRLVKGLRPKVLTLVEQES 478
             T      LE H  PDET++          A H +    L+ VK + P V+T+ E+E+
Sbjct: 249 ASTAAAATGLEFH--PDETLAVNCVMFLHNLAGHDELAAFLKWVKAMSPAVVTIAEREA 305

>NSP1_MEDTR (Q4VYC8) Nodulation signaling pathway 1 protein|
          Length = 554

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
 Frame = +2

Query: 2   PYFKFGYMSANGAIAEAVKGEDR----IHIIDFHIAQGAQWISLLQALAARPGG-PPTVR 166
           P+F F    AN +I + +  E      +HI+D  ++ G QW + L+AL+ RPGG PP VR
Sbjct: 254 PWFSFPNNIANASILQVLAEEPNNLRTLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVR 313

Query: 167 ITGIDDSVS 193
           +T ++ S S
Sbjct: 314 LTVVNASSS 322

>YN86_YEAST (P27514) Hypothetical 99.5 kDa protein in URK1-SMM1 intergenic|
           region
          Length = 894

 Score = 32.3 bits (72), Expect = 0.77
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -2

Query: 486 LVLDSCSTRVSTLGLSPFTSRRIRSRWFAVLTVSSGMWCSSRV 358
           L++ SC   + T  L+PFT   ++   FA+L  +S +W +  +
Sbjct: 433 LLITSCFIALLTFNLTPFTQDSLQKNCFAILIYASLLWATETI 475

>VSX1_BOVIN (Q9GMA3) Visual system homeobox 1 (Transcription factor VSX1)|
           (Retinal inner nuclear layer homeobox protein)
           (Homeodomain protein RINX)
          Length = 365

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
 Frame = -1

Query: 367 LQGEVHRQCLPGDHPEVPLLHLLAGHGDRAELKGNLA---------EAGDVRQSPPNEVQ 215
           L G + R C+P     +P   L +G G    L G+ A          AG +R++   E  
Sbjct: 237 LYGAMVRHCIP-----LPDSVLGSGEGG---LLGSCAPWLLGMHKKSAGTIRKAESEE-- 286

Query: 214 PAASRVG*HRVINAGDPHGRRSAGPGRKGLEEGDPLSSLSDMEVD 80
             A   G   +     PH    AGP R GLEEG P+S + D+ +D
Sbjct: 287 KLAGLWGSDHLKEGSSPH---QAGPQR-GLEEGSPVSGVEDVVID 327

>PANB_VIBCH (Q9KUD0) 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC|
           2.1.2.11) (Ketopantoate hydroxymethyltransferase)
          Length = 264

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 29/95 (30%)
 Frame = -1

Query: 400 RAHRLVRDVVQLQGE----VHRQCLPGDHP-------EVPLLHLLAGHGDRAEL------ 272
           +A R+VRD + LQ      V  +C+P +         +VP++ + AG+G   ++      
Sbjct: 159 KADRMVRDALALQEAGAQIVLLECVPAELANRITQILDVPVIGIGAGNGTDGQILVMHDM 218

Query: 271 ------------KGNLAEAGDVRQSPPNEVQPAAS 203
                       K  LAE GD+RQ+    ++  AS
Sbjct: 219 FGISANYMPKFSKNFLAETGDIRQAVAKYIEDVAS 253

>HNRPL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 555

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = -1

Query: 178 NAGDPHGRRSAGPGRKGLEEGDPLSSLSDMEVDYVDPVLPLDGLRDGAVGRHVAE 14
           NAGD HG    G G  G   G    +  D       PV+ + GL DG V   + E
Sbjct: 34  NAGDQHG--GGGGGGSGAAGGGGGENYDDPHKTPASPVVHIRGLIDGVVEADLVE 86

>FOXD3_CHICK (P79772) Forkhead box protein D3 (HNF3/FH transcription factor|
           genesis) (Winged helix protein CWH-3)
          Length = 394

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 8/70 (11%)
 Frame = -1

Query: 301 LAGHGDRAELKGNLAEAGDVRQSP--------PNEVQPAASRVG*HRVINAGDPHGRRSA 146
           + G GD A  K    EA      P        P E + AA R    R    G P G R  
Sbjct: 25  VVGEGDDAPGKDGDGEARSPAALPLPLDEAAEPGEPERAARRAAAARQPGPGRPEGGRGG 84

Query: 145 GPGRKGLEEG 116
           G G  G EEG
Sbjct: 85  GGGGGGGEEG 94

>POLG_ZYMVR (Q89330) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral ge
          Length = 3083

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
 Frame = +2

Query: 341 ALAVNFTLELHHIPDETVSTANHRDRILRLVKG---------LRPKVLTLVEQESNTN 487
           +LA+NFT+  H    +++    H D +L+L+KG         L  +V+ LV+  ++T+
Sbjct: 386 SLAINFTV--HKSEWDSLKENPHHDNVLKLIKGATQATQNLKLSSEVMKLVQNHTSTH 441

>RPOA_EAVBU (P19811) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:|
            Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1
            papain-like cysteine proteinase (EC 3.4.22.-) (PCP); Nsp2
            cysteine proteinase (EC 3.4.22.-) (CP2) (CP);
            Nonstructural protein
          Length = 3175

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 19/56 (33%), Positives = 25/56 (44%)
 Frame = -1

Query: 394  HRLVRDVVQLQGEVHRQCLPGDHPEVPLLHLLAGHGDRAELKGNLAEAGDVRQSPP 227
            H++V  V  + G +   C PG H  VPL   L G      LK   A A +  + PP
Sbjct: 2477 HKVVAVVADVGGNIVFGCGPGSHIAVPLQDTLKGVVVNKALKN--AAASEYVEGPP 2530


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,226,699
Number of Sequences: 219361
Number of extensions: 1120941
Number of successful extensions: 3731
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3715
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)