>ref|XM_474428.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 624

 Score =  121 bits (61), Expect = 8e-25
 Identities = 123/146 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaggccgncggggtgcagatcgacgcgccngnnagggacggggaggccaacgccggcctc 64
           ||||||| ||| || |||||||||||||| |  ||||||||||||||||||||||  |||
Sbjct: 415 gaggccgtcggcgtccagatcgacgcgccggcgagggacggggaggccaacgccgctctc 474

                                                                       
Query: 65  gtcgacttcatcagctcggtgctnggggtgaanaaaagagaggtgtncatcggctctggc 124
           ||||||||||||||||| || || || || || |||||||| || |  || || ||||||
Sbjct: 475 gtcgacttcatcagctccgtacttggagttaagaaaagagaagtttctattggttctggc 534

                                     
Query: 125 tcgaaatcgagggagaaggtcgtgct 150
           || ||||||||||| ||||| |||||
Sbjct: 535 tcaaaatcgagggaaaaggttgtgct 560

>dbj|AK070132.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044D05, full
           insert sequence
          Length = 566

 Score =  121 bits (61), Expect = 8e-25
 Identities = 123/146 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaggccgncggggtgcagatcgacgcgccngnnagggacggggaggccaacgccggcctc 64
           ||||||| ||| || |||||||||||||| |  ||||||||||||||||||||||  |||
Sbjct: 192 gaggccgtcggcgtccagatcgacgcgccggcgagggacggggaggccaacgccgctctc 251

                                                                       
Query: 65  gtcgacttcatcagctcggtgctnggggtgaanaaaagagaggtgtncatcggctctggc 124
           ||||||||||||||||| || || || || || |||||||| || |  || || ||||||
Sbjct: 252 gtcgacttcatcagctccgtacttggagttaagaaaagagaagtttctattggttctggc 311

                                     
Query: 125 tcgaaatcgagggagaaggtcgtgct 150
           || ||||||||||| ||||| |||||
Sbjct: 312 tcaaaatcgagggaaaaggttgtgct 337

>gb|AY104470.1| Zea mays PCO105859 mRNA sequence
          Length = 567

 Score =  107 bits (54), Expect = 1e-20
 Identities = 117/140 (83%)
 Strand = Plus / Plus

                                                                       
Query: 17  gtgcagatcgacgcgccngnnagggacggggaggccaacgccggcctcgtcgacttcatc 76
           ||||||||||||||||| |  ||||| || || ||||||||||  || |||||||| |||
Sbjct: 243 gtgcagatcgacgcgccggcgagggatggcgaagccaacgccgcgcttgtcgactttatc 302

                                                                       
Query: 77  agctcggtgctnggggtgaanaaaagagaggtgtncatcggctctggctcgaaatcgagg 136
           |||||||| || |||||||| |||||||| ||||  || ||||| || || |||||||||
Sbjct: 303 agctcggtacttggggtgaagaaaagagaagtgtctataggctcgggttctaaatcgagg 362

                               
Query: 137 gagaaggtcgtgctagtaca 156
           || ||||| ||||| |||||
Sbjct: 363 gaaaaggttgtgctggtaca 382

>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
             complete sequence
          Length = 144670

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 5     gaggccgncggggtgcagatcgacgcgccngnnagggacggggaggccaacgccggcctc 64
             ||||||| ||| || |||||||||||||| |  ||||||||||||||||||||||  |||
Sbjct: 57613 gaggccgtcggcgtccagatcgacgcgccggcgagggacggggaggccaacgccgctctc 57554

                              
Query: 65    gtcgacttcatcagctc 81
             |||||||||||||||||
Sbjct: 57553 gtcgacttcatcagctc 57537



 Score = 40.1 bits (20), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 119   tctggctcgaaatcgagggagaaggtcgtgct 150
             |||||||| ||||||||||| ||||| |||||
Sbjct: 56221 tctggctcaaaatcgagggaaaaggttgtgct 56190

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                            
Query: 5        gaggccgncggggtgcagatcgacgcgccngnnagggacggggaggccaacgccggcctc 64
                ||||||| ||| || |||||||||||||| |  ||||||||||||||||||||||  |||
Sbjct: 35121110 gaggccgtcggcgtccagatcgacgcgccggcgagggacggggaggccaacgccgctctc 35121051

                                 
Query: 65       gtcgacttcatcagctc 81
                |||||||||||||||||
Sbjct: 35121050 gtcgacttcatcagctc 35121034



 Score = 40.1 bits (20), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 119      tctggctcgaaatcgagggagaaggtcgtgct 150
                |||||||| ||||||||||| ||||| |||||
Sbjct: 35119718 tctggctcaaaatcgagggaaaaggttgtgct 35119687

>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
             sequence
          Length = 112897

 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 5     gaggccgncggggtgcagatcgacgcgccngnnagggacggggaggccaacgccggcctc 64
             ||||||| ||| || |||||||||||||| |  ||||||||||||||||||||||  |||
Sbjct: 76248 gaggccgtcggcgtccagatcgacgcgccggcgagggacggggaggccaacgccgctctc 76189

                              
Query: 65    gtcgacttcatcagctc 81
             |||||||||||||||||
Sbjct: 76188 gtcgacttcatcagctc 76172



 Score = 40.1 bits (20), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 119   tctggctcgaaatcgagggagaaggtcgtgct 150
             |||||||| ||||||||||| ||||| |||||
Sbjct: 74855 tctggctcaaaatcgagggaaaaggttgtgct 74824

>gb|U95953.1|ZMU95953 Zea mays viviparous-14 (vp14) mRNA, complete cds
          Length = 2498

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 49  ggccaacgccggcctcgtcgacttca 74
           ||||||||||||||||||| ||||||
Sbjct: 840 ggccaacgccggcctcgtctacttca 865

>gb|AY838901.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid
           dioxygenase 5 (NCED5) mRNA, complete cds
          Length = 2041

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 50  gccaacgccggcctcgtcgacttca 74
           |||||||||||||||||| ||||||
Sbjct: 861 gccaacgccggcctcgtctacttca 885

>gb|DQ145930.1| Hordeum vulgare subsp. vulgare 9-cis-epoxycarotenoid dioxygenase 1
           mRNA, complete cds
          Length = 2376

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 50  gccaacgccggcctcgtcgacttca 74
           |||||||||||||||||| ||||||
Sbjct: 742 gccaacgccggcctcgtctacttca 766

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 50       gccaacgccggcctcgtcgacttca 74
                |||||||||||||||||| ||||||
Sbjct: 26302646 gccaacgccggcctcgtctacttca 26302670

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 50       gccaacgccggcctcgtcgacttca 74
                |||||||||||||||||| ||||||
Sbjct: 26230822 gccaacgccggcctcgtctacttca 26230846

>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 133978

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    gccaacgccggcctcgtcgacttca 74
             |||||||||||||||||| ||||||
Sbjct: 66630 gccaacgccggcctcgtctacttca 66654

>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    gccaacgccggcctcgtcgacttca 74
             |||||||||||||||||| ||||||
Sbjct: 16925 gccaacgccggcctcgtctacttca 16949

>dbj|AB121068.1| Halorubrum saccharovorum ndk gene for nucleoside diphosphate
           kinase, partial cds
          Length = 423

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  cggcctcgtcgacttcatca 77
           ||||||||||||||||||||
Sbjct: 174 cggcctcgtcgacttcatca 193

>ref|XM_787603.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC587894 (LOC587894), mRNA
          Length = 909

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 61  cctcgtcgacttcatcagc 79
           |||||||||||||||||||
Sbjct: 732 cctcgtcgacttcatcagc 750

>gb|AF227433.1|AF227433 Penicillium chrysogenum 3'-phosphoadenosine-5'-phosphosulfate
           reductase (ParA) mRNA, complete cds
          Length = 930

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 56  gccggcctcgtcgacttca 74
           |||||||||||||||||||
Sbjct: 621 gccggcctcgtcgacttca 603


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 626,140
Number of Sequences: 3902068
Number of extensions: 626140
Number of successful extensions: 39228
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39160
Number of HSP's gapped (non-prelim): 68
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)