ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63m03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 438 bits (221), Expect = e-119 Identities = 329/365 (90%) Strand = Plus / Plus Query: 6 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 65 |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 323 ctcgatgatcccaacgtcggccttatcttccccgccgacgccatcgcgcgggccaagcac 382 Query: 66 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 125 |||||| || | |||||||| || ||||||| |||||||| ||||||||||||||||| Sbjct: 383 tacctcgccatggcacccggtggactaggtgcttacagtgattcccgaggtatccctggt 442 Query: 126 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 185 | ||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 443 attaggaaggaagtcgccgagttcatcgagaggcgtgatggttatccaagtgatccagaa 502 Query: 186 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctcaacgccattatc 245 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 503 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctgaataccattatc 562 Query: 246 agaaacgagagggacgggattttggtccctgttccacaatacccgctttattctgctgcc 305 ||||| ||||| || |||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 563 agaaatgagagagatgggattctggttcctgttccacaatacccgctttattctgctgcc 622 Query: 306 atttccctctttggtggttctcttgtcccatattatttggaagaagaggctaattgggga 365 ||||||||||||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 623 atttccctctttggtggttctctcgtgccatactacttagaagaagaggctaactgggga 682 Query: 366 cttga 370 ||||| Sbjct: 683 cttga 687 Score = 281 bits (142), Expect = 1e-72 Identities = 220/246 (89%) Strand = Plus / Plus Query: 405 cggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctactggc 464 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 722 cggtcaaagggaatcactgttcgagcaatggtgattatcaacccaggaaaccctactggc 781 Query: 465 caatgcctaagtgaagcaaatattagggaacttttgaacttctgctatcaggaaaaattg 524 |||||||| ||||||| ||| || | ||||||| | || ||||||| || || || || Sbjct: 782 caatgccttagtgaaggaaacataaaggaacttctcaaattctgcttccatgagaactta 841 Query: 525 gttctgcttgcagatgaagtttatcaacagaatgtttatcaagatgagcgtccatttata 584 |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 842 gttctgcttgcagatgaagtctatcaacagaacatttatcaagatgagcgcccatttata 901 Query: 585 agtgcaagaaaggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatt 644 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||| || Sbjct: 902 agtgctagaaaggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtt 961 Query: 645 tctttc 650 |||||| Sbjct: 962 tctttc 967
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 430 bits (217), Expect = e-117 Identities = 328/365 (89%) Strand = Plus / Plus Query: 6 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 65 |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 274 ctcgatgatcccaacgtcggccttatcttccccgccgacgccatcgcgcgggccaagcac 333 Query: 66 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 125 |||||| || | |||||||| || ||||||| |||||||| ||||||||||||||||| Sbjct: 334 tacctcgccatggcacccggtggactaggtgcttacagtgattcccgaggtatccctggt 393 Query: 126 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 185 | ||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 394 attaggaaggaagtcgccgagttcatcgagaggcgtgatggttatccaagtgatccagaa 453 Query: 186 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctcaacgccattatc 245 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 454 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctgaataccattatc 513 Query: 246 agaaacgagagggacgggattttggtccctgttccacaatacccgctttattctgctgcc 305 ||||| ||||| || |||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 514 agaaatgagagagatgggattctggttcctgttccacaatacccgctttattctgctgcc 573 Query: 306 atttccctctttggtggttctcttgtcccatattatttggaagaagaggctaattgggga 365 ||||||| ||||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 574 atttccccctttggtggttctctcgtgccatactacttagaagaagaggctaactgggga 633 Query: 366 cttga 370 ||||| Sbjct: 634 cttga 638 Score = 281 bits (142), Expect = 1e-72 Identities = 220/246 (89%) Strand = Plus / Plus Query: 405 cggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctactggc 464 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 673 cggtcaaagggaatcactgttcgagcaatggtgattatcaacccaggaaaccctactggc 732 Query: 465 caatgcctaagtgaagcaaatattagggaacttttgaacttctgctatcaggaaaaattg 524 |||||||| ||||||| ||| || | ||||||| | || ||||||| || || || || Sbjct: 733 caatgccttagtgaaggaaacataaaggaacttctcaaattctgcttccatgagaactta 792 Query: 525 gttctgcttgcagatgaagtttatcaacagaatgtttatcaagatgagcgtccatttata 584 |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 793 gttctgcttgcagatgaagtctatcaacagaacatttatcaagatgagcgcccatttata 852 Query: 585 agtgcaagaaaggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatt 644 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||| || Sbjct: 853 agtgctagaaaggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtt 912 Query: 645 tctttc 650 |||||| Sbjct: 913 tctttc 918
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 430 bits (217), Expect = e-117 Identities = 328/365 (89%) Strand = Plus / Plus Query: 6 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 65 |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 92 ctcgatgatcccaacgtcggccttatcttccccgccgacgccatcgcgcgggccaagcac 151 Query: 66 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 125 |||||| || | |||||||| || ||||||| |||||||| ||||||||||||||||| Sbjct: 152 tacctcgccatggcacccggtggactaggtgcttacagtgattcccgaggtatccctggt 211 Query: 126 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 185 | ||||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 212 attaggaaggaagtcgccgagttcatcgagaggcgtgatggttatccaagtgatccagaa 271 Query: 186 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctcaacgccattatc 245 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 272 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctgaataccattatc 331 Query: 246 agaaacgagagggacgggattttggtccctgttccacaatacccgctttattctgctgcc 305 |||| ||||| || |||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 332 agaagtgagagagatgggattctggttcctgttccacaatacccgctttattctgctgcc 391 Query: 306 atttccctctttggtggttctcttgtcccatattatttggaagaagaggctaattgggga 365 ||||||||||||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 392 atttccctctttggtggttctctcgtgccatactacttagaagaagaggctaactgggga 451 Query: 366 cttga 370 ||||| Sbjct: 452 cttga 456 Score = 281 bits (142), Expect = 1e-72 Identities = 220/246 (89%) Strand = Plus / Plus Query: 405 cggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctactggc 464 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 491 cggtcaaagggaatcactgttcgagcaatggtgattatcaacccaggaaaccctactggc 550 Query: 465 caatgcctaagtgaagcaaatattagggaacttttgaacttctgctatcaggaaaaattg 524 |||||||| ||||||| ||| || | ||||||| | || ||||||| || || || || Sbjct: 551 caatgccttagtgaaggaaacataaaggaacttctcaaattctgcttccatgagaactta 610 Query: 525 gttctgcttgcagatgaagtttatcaacagaatgtttatcaagatgagcgtccatttata 584 |||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| Sbjct: 611 gttctgcttgcagatgaagtctatcaacagaacatttatcaagatgagcgcccatttata 670 Query: 585 agtgcaagaaaggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatt 644 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||| || Sbjct: 671 agtgctagaaaggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtt 730 Query: 645 tctttc 650 |||||| Sbjct: 731 tctttc 736
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 424 bits (214), Expect = e-115 Identities = 461/542 (85%), Gaps = 1/542 (0%) Strand = Plus / Minus Query: 97 cgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattcaga 156 |||||||||||||||| || ||||| || ||||||||||||||||||| ||||| || | Sbjct: 1302 cgtacagtgactcccgcgg-atcccgggaatcaggaaggaagttgccgacttcatccaca 1244 Query: 157 ggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaaag 216 ||||||||| ||||| |||||||| || || || ||||||||||| ||||||||||||| Sbjct: 1243 agcgtgatggatatcccagtgatccggaactcatctacctcacagacggtgccagcaaag 1184 Query: 217 gtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttggtccctg 276 |||||||||| || || ||| |||| || |||||||||| ||||||||| |||||||||| Sbjct: 1183 gtgtgatgcagatcctgaacaccatcattagaaacgagatggacgggatcttggtccctg 1124 Query: 277 ttccacaatacccgctttattctgctgccatttccctctttggtggttctcttgtcccat 336 |||| || ||||| |||||||| || |||||||||||| |||||||||||| ||||| | Sbjct: 1123 ttcctcagtacccactttattccgccaccatttccctctatggtggttctctggtcccgt 1064 Query: 337 attatttggaagaagaggctaattggggacttgatcttgtcagtacccgccaatcagttg 396 | || ||||||||||||||||| ||| | || || ||| | || ||| ||| |||| | Sbjct: 1063 actacttggaagaagaggctaactggagcctcgactttgcaaatatccgacaagcagtgg 1004 Query: 397 cagaagcacggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaacc 456 | || ||||| || ||||||||| |||||||||| |||||||| ||||| |||||||| | Sbjct: 1003 ccgaggcacgttcgaagggaatctctgttcgagcgatggtgatgataaatccaggaaatc 944 Query: 457 ctactggccaatgcctaagtgaagcaaatattagggaacttttgaacttctgctatcagg 516 | |||||||| ||||| |||||||||||||| ||||||||| || | ||||| || | Sbjct: 943 ccactggccagtgccttagtgaagcaaatataagggaacttctgcgatattgctaccatg 884 Query: 517 aaaaattggttctgcttgcagatgaagtttatcaacagaatgtttatcaagatgagcgtc 576 |||| || |||||||||||||| ||||| ||||| ||||| ||||||||||||||||| | Sbjct: 883 aaaacttagttctgcttgcagacgaagtgtatcagcagaacgtttatcaagatgagcgcc 824 Query: 577 catttataagtgcaagaaaggttatgtttgacatgggtcctccagtaagcagggaagttc 636 |||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||| |||| Sbjct: 823 catttataagcgcaagaaaggttatgttcgacatgggtccgccaataagcagggaggttc 764 Query: 637 ag 638 || Sbjct: 763 ag 762
>gb|AY108756.1| Zea mays PCO087866 mRNA sequence Length = 1198 Score = 222 bits (112), Expect = 1e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 402 gcacggtcaaagggaatcactgttcgagcaatggtgataataaacccaggaaaccctact 461 |||||||| ||||||||| |||||||| | |||||||| ||||| |||| ||| || ||| Sbjct: 69 gcacggtccaagggaatctctgttcgaccgatggtgatgataaatccagnaaatcccact 128 Query: 462 ggccaatgcctaagtgaagcaaatattagggaacttttgaacttctgctatcaggaaaaa 521 ||||||||||| |||||||| ||||| | ||||||| || | || ||||| || ||||| Sbjct: 129 ggccaatgccttagtgaagcgaatataaaggaacttctgcaattttgctaccatgaaaac 188 Query: 522 ttggttctgcttgcagatgaagtttatcaacagaatgtttatcaagatgagcgtccattt 581 || |||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| Sbjct: 189 ttagttctgcttgcagatgaagtgtatcaacagaacatttatcaagatgagcggccattt 248 Query: 582 ataagtgcaagaaaggttatgtttgacatgggtcctccagtaagcag 628 ||||| ||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 249 ataagcgcaagaaaggttatgttcgacatgggtccgccaataagcag 295
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Minus Query: 423 gttcgagcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagca 482 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| | Sbjct: 448298 gttcgagcaatggtgattatcaacccaggaaaccctactggccaatgccttagtgaagga 448239 Query: 483 aatattagggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaa 542 || || | ||||||| | || ||||||| || || || || |||||||||||||||||| Sbjct: 448238 aacataaaggaacttctcaaattctgcttccatgagaacttagttctgcttgcagatgaa 448179 Query: 543 gtttatcaacagaatgtttatcaagatgagcgtccatttataagtgcaagaaaggt 598 || ||||||||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 448178 gtctatcaacagaacatttatcaagatgagcgcccatttataagtgctagaaaggt 448123 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 263 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 322 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449184 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 449125 Query: 323 ttctcttgtcccatattatttggaagaagaggctaattggggacttga 370 |||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 449124 ttctctcgtgccatactacttagaagaagaggctaactggggacttga 449077 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 174 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 233 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449386 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 449327 Query: 234 aacgccattatcagaaacgagag 256 || ||||||||||||| ||||| Sbjct: 449326 aataccattatcagaaatgagag 449304 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 6 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 65 |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 449844 ctcgatgatcccaacgtcggccttatcttccccgccgacgccatcgcgcgggccaagcac 449785 Query: 66 tacctctccctcgcacccgg 85 |||||| || | |||||||| Sbjct: 449784 tacctcgccatggcacccgg 449765 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 92 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 151 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 449575 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 449516 Query: 152 tcagaggcgtgatgggtatcc 172 ||||||||||||| ||||| Sbjct: 449515 cgagaggcgtgatggttatcc 449495 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 595 aggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatttctttc 650 ||||| ||||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 447840 aggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtttctttc 447785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cggtcaaagggaatcactgt 424 |||||||||||||||||||| Sbjct: 449042 cggtcaaagggaatcactgt 449023
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Minus Query: 423 gttcgagcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagca 482 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| | Sbjct: 50462 gttcgagcaatggtgattatcaacccaggaaaccctactggccaatgccttagtgaagga 50403 Query: 483 aatattagggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaa 542 || || | ||||||| | || ||||||| || || || || |||||||||||||||||| Sbjct: 50402 aacataaaggaacttctcaaattctgcttccatgagaacttagttctgcttgcagatgaa 50343 Query: 543 gtttatcaacagaatgtttatcaagatgagcgtccatttataagtgcaagaaaggt 598 || ||||||||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 50342 gtctatcaacagaacatttatcaagatgagcgcccatttataagtgctagaaaggt 50287 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 263 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 322 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51348 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 51289 Query: 323 ttctcttgtcccatattatttggaagaagaggctaattggggacttga 370 |||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 51288 ttctctcgtgccatactacttagaagaagaggctaactggggacttga 51241 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 174 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 233 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51550 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 51491 Query: 234 aacgccattatcagaaacgagag 256 || ||||||||||||| ||||| Sbjct: 51490 aataccattatcagaaatgagag 51468 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 6 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 65 |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 52008 ctcgatgatcccaacgtcggccttatcttccccgccgacgccatcgcgcgggccaagcac 51949 Query: 66 tacctctccctcgcacccgg 85 |||||| || | |||||||| Sbjct: 51948 tacctcgccatggcacccgg 51929 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 92 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 151 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 51739 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 51680 Query: 152 tcagaggcgtgatgggtatcc 172 ||||||||||||| ||||| Sbjct: 51679 cgagaggcgtgatggttatcc 51659 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 595 aggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatttctttc 650 ||||| ||||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 50004 aggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtttctttc 49949 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cggtcaaagggaatcactgt 424 |||||||||||||||||||| Sbjct: 51206 cggtcaaagggaatcactgt 51187
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 182 bits (92), Expect = 1e-42 Identities = 155/176 (88%) Strand = Plus / Minus Query: 423 gttcgagcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagca 482 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| | Sbjct: 2210 gttcgagcaatggtgattatcaacccaggaaaccctactggccaatgccttagtgaagga 2151 Query: 483 aatattagggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaa 542 || || | ||||||| | || ||||||| || || || || |||||||||||||||||| Sbjct: 2150 aacataaaggaacttctcaaattctgcttccatgagaacttagttctgcttgcagatgaa 2091 Query: 543 gtttatcaacagaatgtttatcaagatgagcgtccatttataagtgcaagaaaggt 598 || ||||||||||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 2090 gtctatcaacagaacatttatcaagatgagcgcccatttataagtgctagaaaggt 2035 Score = 151 bits (76), Expect = 3e-33 Identities = 100/108 (92%) Strand = Plus / Minus Query: 263 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 322 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3096 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 3037 Query: 323 ttctcttgtcccatattatttggaagaagaggctaattggggacttga 370 |||||| || ||||| || || |||||||||||||| ||||||||||| Sbjct: 3036 ttctctcgtgccatactacttagaagaagaggctaactggggacttga 2989 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 174 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 233 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3298 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 3239 Query: 234 aacgccattatcagaaacgagag 256 || ||||||||||||| ||||| Sbjct: 3238 aataccattatcagaaatgagag 3216 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 6 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 65 |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 3756 ctcgatgatcccaacgtcggccttatcttccccgccgacgccatcgcgcgggccaagcac 3697 Query: 66 tacctctccctcgcacccgg 85 |||||| || | |||||||| Sbjct: 3696 tacctcgccatggcacccgg 3677 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 92 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 151 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 3487 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 3428 Query: 152 tcagaggcgtgatgggtatcc 172 ||||||||||||| ||||| Sbjct: 3427 cgagaggcgtgatggttatcc 3407 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 595 aggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatttctttc 650 ||||| ||||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct: 1752 aggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtttctttc 1697 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 cggtcaaagggaatcactgt 424 |||||||||||||||||||| Sbjct: 2954 cggtcaaagggaatcactgt 2935
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 165 bits (83), Expect = 2e-37 Identities = 215/259 (83%) Strand = Plus / Plus Query: 91 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 150 ||||||| || |||||||| |||||| | ||||| | ||||||||||| || ||||||| Sbjct: 299 taggtgcttatagtgactctcgaggtcttcctggaataaggaaggaagtggcagagttca 358 Query: 151 ttcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcca 210 || |||||||||||||||||| |||||||||||||| || | ||||| |||||||||| Sbjct: 359 ttgggaggcgtgatgggtatccaagtgatccagagctcatatttctcacggatggtgcca 418 Query: 211 gcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttgg 270 ||||||| || ||||| || | || | |||||| | || ||||| |||||||||| Sbjct: 419 gcaaaggagtaatgcagattttgaatacaattatccgtggtgaaagggatgggattttgg 478 Query: 271 tccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttg 330 | ||||| |||||||| |||||||| || ||||| || || ||||||||||||||||||| Sbjct: 479 ttcctgtcccacaatatccgctttactcagctgcaatatctctctttggtggttctcttg 538 Query: 331 tcccatattatttggaaga 349 | ||||||||| ||||||| Sbjct: 539 ttccatattatctggaaga 557 Score = 119 bits (60), Expect = 1e-23 Identities = 183/224 (81%) Strand = Plus / Plus Query: 390 tcagttgcagaagcacggtcaaagggaatcactgttcgagcaatggtgataataaaccca 449 |||||||||| ||| || || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 598 tcagttgcagcagctcgctccaaaggaataactgtccgagcaatggtgattataaaccct 657 Query: 450 ggaaaccctactggccaatgcctaagtgaagcaaatattagggaacttttgaacttctgc 509 ||||| |||||||| || || || |||||||| ||| | | ||| | ||| ||||||| Sbjct: 658 ggaaatcctactggtcagtgtcttagtgaagccaatttaaaagaaatattgcacttctgt 717 Query: 510 tatcaggaaaaattggttctgcttgcagatgaagtttatcaacagaatgtttatcaagat 569 || || ||||| || || |||||| |||||||||||| ||||||||| |||| || ||| Sbjct: 718 taccaagaaaacttagtcttgcttggagatgaagtttaccaacagaatatttaccaggat 777 Query: 570 gagcgtccatttataagtgcaagaaaggttatgtttgacatggg 613 ||||| || ||||| ||||| ||||||||| || | |||||||| Sbjct: 778 gagcgcccttttatcagtgctagaaaggttttgatggacatggg 821
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 157 bits (79), Expect = 5e-35 Identities = 214/259 (82%) Strand = Plus / Plus Query: 91 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 150 ||||||| || |||||||| |||||| | ||||| | ||||||||||| || ||||||| Sbjct: 299 taggtgcttatagtgactctcgaggtcttcctggaataaggaaggaagtggcagagttca 358 Query: 151 ttcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgcca 210 || |||||||||||||||||| |||||||||||||| || | ||||| |||||||||| Sbjct: 359 ttgggaggcgtgatgggtatccaagtgatccagagctcatatttctcacggatggtgcca 418 Query: 211 gcaaaggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttgg 270 ||||||| || ||||| || | || | |||||| | || ||||| |||||||||| Sbjct: 419 gcaaaggagtaatgcagattttgaatacaattatccgtggtgaaagggatgggattttgg 478 Query: 271 tccctgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttg 330 | ||||| |||||||| |||||||| || ||||| || || |||| |||||||||||||| Sbjct: 479 ttcctgtcccacaatatccgctttactcagctgcaatatctctctatggtggttctcttg 538 Query: 331 tcccatattatttggaaga 349 | ||||||||| ||||||| Sbjct: 539 ttccatattatctggaaga 557 Score = 103 bits (52), Expect = 7e-19 Identities = 169/208 (81%) Strand = Plus / Plus Query: 390 tcagttgcagaagcacggtcaaagggaatcactgttcgagcaatggtgataataaaccca 449 |||||||||| ||| || || || ||||| ||||| |||||||||||||| |||||||| Sbjct: 598 tcagttgcagcagctcgctccaaaggaataactgtccgagcaatggtgattataaaccct 657 Query: 450 ggaaaccctactggccaatgcctaagtgaagcaaatattagggaacttttgaacttctgc 509 ||||| |||||||| || || || |||||||| ||| | | ||| | ||| ||||||| Sbjct: 658 ggaaatcctactggtcagtgtcttagtgaagccaatttaaaagaaatattgcacttctgt 717 Query: 510 tatcaggaaaaattggttctgcttgcagatgaagtttatcaacagaatgtttatcaagat 569 | || ||||| || || |||||| |||||||||||| ||||||||| |||| || ||| Sbjct: 718 aaccaagaaaacttagtcttgcttggagatgaagtttaccaacagaatatttaccaggat 777 Query: 570 gagcgtccatttataagtgcaagaaagg 597 ||||| || ||||| ||||| ||||||| Sbjct: 778 gagcgcccttttatcagtgctagaaagg 805
>gb|DQ226853.1| Boechera divaricarpa isolate SLW-C-D09 mRNA sequence Length = 646 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| ||||||||||| |||| || || || || ||||| || ||||| Sbjct: 407 ggcggtttaggtgcttacagtgactcaagaggcattccaggagttaggaaagaggttgct 466 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 467 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatatttctcactgat 526 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 527 ggagctagcaaaggtgtgatgcaaat 552
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 594 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 653 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 654 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 713 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 714 ggagctagcaaaggtgtgatgcaaat 739 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 939 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 998 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 999 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 1058 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 1059 cagcagaacatataccaggatgagcgtccctttat 1093
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 628 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 687 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 688 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 747 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 748 ggagctagcaaaggtgtgatgcaaat 773 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 973 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 1032 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 1033 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 1092 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 1093 cagcagaacatataccaggatgagcgtccctttat 1127
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 411 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 412 ggagctagcaaaggtgtgatgcaaat 437 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 637 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 696 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 697 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 756 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 757 cagcagaacatataccaggatgagcgtccctttat 791
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 416 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 475 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 476 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 535 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 536 ggagctagcaaaggtgtgatgcaaat 561 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 761 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 820 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 821 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 880 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 881 cagcagaacatataccaggatgagcgtccctttat 915
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 517 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 518 ggagctagcaaaggtgtgatgcaaat 543 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 743 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 802 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 803 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 862 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 863 cagcagaacatataccaggatgagcgtccctttat 897
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 382 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 441 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 442 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 501 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 502 ggagctagcaaaggtgtgatgcaaat 527
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 83.8 bits (42), Expect = 7e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 439 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 498 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 499 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 558 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 559 ggagctagcaaaggtgtgatgcaaat 584 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 784 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 843 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 844 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 903 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 904 cagcagaacatataccaggatgagcgtccctttat 938
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 129 aggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagagctt 188 ||||| || ||||| ||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 32 aggaaagaggttgctgagttcattcaacggcgtgatgggtatccaagtgacccagaactc 91 Query: 189 atttacctcacagatggtgccagcaaaggtgtgatgcaaat 229 || | ||||| ||||| || |||||||||||||||||||| Sbjct: 92 atctttctcactgatggagctagcaaaggtgtgatgcaaat 132 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 332 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 391 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 392 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 451 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 452 cagcagaacatataccaggatgagcgtccctttat 486
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||| | ||||| || || | ||||| ||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtaacccagaactcatctttctcactgat 517 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 518 ggagctagcaaaggtgtgatgcaaat 543 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 743 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 802 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 803 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 862 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 863 cagcagaacatataccaggatgagcgtccctttat 897
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 84 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 143 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 144 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 203 ||||||||||| |||||||||||||||| ||| | ||||| || || | ||||| ||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtaacccagaactcatctttctcactgat 411 Query: 204 ggtgccagcaaaggtgtgatgcaaat 229 || || |||||||||||||||||||| Sbjct: 412 ggagctagcaaaggtgtgatgcaaat 437 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 637 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 696 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 697 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 756 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 757 cagcagaacatataccaggatgagcgtccctttat 791
>emb|AM260496.1| Platanus acerifolia partial mRNA for alanine aminotransferase (at gene) Length = 568 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 414 ggaatcactgttcgagcaatggtgataataaacccaggaaaccctactgg 463 ||||| ||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 137 ggaattactgtccgagccatggtgattataaacccaggaaaccctactgg 186 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 tggtggttctcttgtcccatattatttggaaga 349 ||||||||||||||| ||||||| | ||||||| Sbjct: 40 tggtggttctcttgttccatattttctggaaga 72
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 428 agcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaag 480 |||||||||||| ||||| || |||||||||||||| |||||||| ||||||| Sbjct: 79721 agcaatggtgatcataaatcctggaaaccctactggtcaatgccttagtgaag 79669 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 129 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 172 ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 80405 aggaaagaagtggcagagtttatacagaggcgtgatggttatcc 80362
>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.3 mRNA, complete cds Length = 1817 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 448 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 507 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 508 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 567 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 568 aaaggtgtgatgcaaat 584 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 784 gcaatggtgattattaaccccggaaacccaactggcca 821
>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.4 mRNA, complete cds Length = 1835 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 466 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 525 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 526 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 585 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 586 aaaggtgtgatgcaaat 602 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 802 gcaatggtgattattaaccccggaaacccaactggcca 839
>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.1 mRNA, complete cds Length = 1795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 426 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 485 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 486 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 545 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 546 aaaggtgtgatgcaaat 562 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 762 gcaatggtgattattaaccccggaaacccaactggcca 799
>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.2 mRNA, complete cds Length = 1851 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 482 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 541 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 542 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 601 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 602 aaaggtgtgatgcaaat 618 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 818 gcaatggtgattattaaccccggaaacccaactggcca 855
>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1477 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 301 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 360 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 361 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 420 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 421 aaaggtgtgatgcaaat 437 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 637 gcaatggtgattattaaccccggaaacccaactggcca 674
>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1773 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 426 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 485 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 486 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 545 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 546 aaaggtgtgatgcaaat 562 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 762 gcaatggtgattattaaccccggaaacccaactggcca 799
>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2) mRNA, complete cds Length = 1582 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 93 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 152 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 320 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 379 Query: 153 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 212 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 380 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 439 Query: 213 aaaggtgtgatgcaaat 229 ||||||||||||||||| Sbjct: 440 aaaggtgtgatgcaaat 456 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 656 gcaatggtgattattaaccccggaaacccaactggcca 693
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 91 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 150 ||||||| || |||||||||||||| | || || || ||| ||||||| || ||||||| Sbjct: 35227 taggtgcttatagtgactcccgaggccttccaggagtgaggcaggaagtggcagagttca 35168 Query: 151 ttcagaggcgtgatgggtatcc 172 | || ||||||||||| ||||| Sbjct: 35167 tacaaaggcgtgatggttatcc 35146 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 428 agcaatggtgataataaacccaggaaaccctactggccaatg 469 |||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 34255 agcaatggtgatcataaaccctggaaatcctactggtcaatg 34214 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 174 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgca 226 |||||||||||||| || || || || |||||||||||||| | ||||||||| Sbjct: 35022 agtgatccagagctcatatatcttactgatggtgccagcaaggctgtgatgca 34970
>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence Length = 1782 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 157 ggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaaag 216 |||||||||| ||||| || |||||||| || || | || || ||||| || ||||||| Sbjct: 490 ggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagcaaag 549 Query: 217 gtgtgatgcaaat 229 ||||||||||||| Sbjct: 550 gtgtgatgcaaat 562 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 762 gcaatggtgattattaaccccggaaacccaactggcca 799
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 129 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 172 ||||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 46944 aggaaagaggttgctgagttcattcaacggcgtgatgggtatcc 46901 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 195 ctcacagatggtgccagcaaaggtgtgatgcaaat 229 ||||| ||||| || |||||||||||||||||||| Sbjct: 46795 ctcactgatggagctagcaaaggtgtgatgcaaat 46761 Score = 46.1 bits (23), Expect = 0.14 Identities = 122/155 (78%) Strand = Plus / Minus Query: 429 gcaatggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatatt 488 ||||||||||| || ||||| || ||||| |||||||| || ||||| ||||| || || Sbjct: 46392 gcaatggtgatcattaaccctgggaacccaactggccagtgtctaagcgaagctaacata 46333 Query: 489 agggaacttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttat 548 || || | ||||| ||||| ||| | || ||| ||||||| || | ||| || |||||| Sbjct: 46332 agagagatattgaagttctgttataacgagaaactggttcttctgggagacgaggtttat 46273 Query: 549 caacagaatgtttatcaagatgagcgtccatttat 583 || ||||| | || || ||||||||||| ||||| Sbjct: 46272 cagcagaacatataccaggatgagcgtccctttat 46238
>ref|XM_643324.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (461.t00001) partial mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 544 tttatcaacagaatgtttatca 565 |||||||||||||||||||||| Sbjct: 210 tttatcaacagaatgtttatca 231
>ref|XM_650385.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (28.t00005) partial mRNA Length = 735 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 544 tttatcaacagaatgtttatca 565 |||||||||||||||||||||| Sbjct: 291 tttatcaacagaatgtttatca 312
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Plus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 64504 gcaatggtgattattaaccccggaaacccaactggcca 64541 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 201 gatggtgccagcaaaggtgtgatgcaaat 229 ||||| || |||||||||||||||||||| Sbjct: 63896 gatggagcgagcaaaggtgtgatgcaaat 63924
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 44.1 bits (22), Expect = 0.57 Identities = 34/38 (89%) Strand = Plus / Minus Query: 429 gcaatggtgataataaacccaggaaaccctactggcca 466 ||||||||||| || ||||| |||||||| |||||||| Sbjct: 89998 gcaatggtgattattaaccccggaaacccaactggcca 89961 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 201 gatggtgccagcaaaggtgtgatgcaaat 229 ||||| || |||||||||||||||||||| Sbjct: 90606 gatggagcgagcaaaggtgtgatgcaaat 90578
>gb|AY105956.1| Zea mays PCO123780 mRNA sequence Length = 1000 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Plus Query: 418 tcactgttcgagcaatggtgataataaacccaggaaaccctactgg 463 |||||||| |||| |||||| ||||||| || || ||||||||||| Sbjct: 729 tcactgttagagctatggtggtaataaatcccggcaaccctactgg 774
>gb|BC116486.1| Danio rerio cDNA clone IMAGE:7432378, partial cds Length = 1596 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 ggtcaaagggaatcactgttc 426 ||||||||||||||||||||| Sbjct: 728 ggtcaaagggaatcactgttc 748
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 atgaagtttatcaacagaatg 558 ||||||||||||||||||||| Sbjct: 124963 atgaagtttatcaacagaatg 124943
>gb|AC117250.3| Mus musculus BAC clone RP24-366A20 from 12, complete sequence Length = 125733 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 538 atgaagtttatcaacagaatg 558 ||||||||||||||||||||| Sbjct: 7514 atgaagtttatcaacagaatg 7494
>gb|BC096812.1| Danio rerio sb:cb620, mRNA (cDNA clone IMAGE:7225022), partial cds Length = 2509 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 ggtcaaagggaatcactgttc 426 ||||||||||||||||||||| Sbjct: 710 ggtcaaagggaatcactgttc 730
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 cccatattatttggaagaaga 352 ||||||||||||||||||||| Sbjct: 91227 cccatattatttggaagaaga 91207
>ref|XM_689815.1| PREDICTED: Danio rerio similar to MGC81939 protein (LOC566540), mRNA Length = 996 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 ggtcaaagggaatcactgttc 426 ||||||||||||||||||||| Sbjct: 686 ggtcaaagggaatcactgttc 706
>emb|BX294181.5| Zebrafish DNA sequence from clone CH211-284E13 in linkage group 5, complete sequence Length = 171388 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 ggtcaaagggaatcactgttc 426 ||||||||||||||||||||| Sbjct: 21389 ggtcaaagggaatcactgttc 21369
>gb|AC131997.23| Mus musculus chromosome 15, clone RP23-381H9, complete sequence Length = 194206 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 608 catgggtcctccagtaagca 627 |||||||||||||||||||| Sbjct: 142565 catgggtcctccagtaagca 142546
>emb|BX284613.3| Human DNA sequence from clone RP5-1092L12 on chromosome 1 Contains the 3' end of a novel gene (FLJ23550) and a novel pseudogene, complete sequence Length = 106576 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 gctatcaggaaaaattggtt 527 |||||||||||||||||||| Sbjct: 90153 gctatcaggaaaaattggtt 90172
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gctttattctgctgccattt 309 |||||||||||||||||||| Sbjct: 130335 gctttattctgctgccattt 130354
>ref|XM_775420.1| PREDICTED: Strongylocentrotus purpuratus similar to PRP3 pre-mRNA processing factor 3 homolog (LOC575001), mRNA Length = 1716 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cctctttggtggttctcttg 330 |||||||||||||||||||| Sbjct: 112 cctctttggtggttctcttg 93
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 791217 ttccacaatacccgctttat 791236
>emb|BX294140.1| Pirellula sp. strain 1 complete genome; segment 8/24 Length = 307050 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccgccaatcagttgcagaag 402 |||||||||||||||||||| Sbjct: 205832 ccgccaatcagttgcagaag 205813
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gccgatgccatcgcaagggc 58 |||||||||||||||||||| Sbjct: 292803 gccgatgccatcgcaagggc 292784
>emb|AL445563.1|MPULM01 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 1/3 Length = 327650 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 aaatattagggaacttttga 501 |||||||||||||||||||| Sbjct: 319556 aaatattagggaacttttga 319537
>emb|BX470212.6| Zebrafish DNA sequence from clone CH211-229H7 in linkage group 14, complete sequence Length = 94121 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atggtgataataaacccaggaaac 455 |||||||||| ||||||||||||| Sbjct: 3093 atggtgataaaaaacccaggaaac 3116
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 821262 ttccacaatacccgctttat 821281
>gb|AC078935.5| Staphylococcus aureus clone sabac-7, complete sequence Length = 53354 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 20568 ttccacaatacccgctttat 20587
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 829669 ttccacaatacccgctttat 829688
>gb|AC008250.23| Homo sapiens 12 BAC RP11-729I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141132 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 518 aaaattggttctgcttgcagatga 541 ||||||| |||||||||||||||| Sbjct: 15086 aaaattgcttctgcttgcagatga 15063
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 741076 ttccacaatacccgctttat 741095
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 808068 ttccacaatacccgctttat 808087
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agcacggtcaaagggaatca 420 |||||||||||||||||||| Sbjct: 28860087 agcacggtcaaagggaatca 28860068 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gattttggtccctgttccacaata 286 ||||||||||||||||| |||||| Sbjct: 14752462 gattttggtccctgttctacaata 14752439
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gattttggtccctgttccacaata 286 ||||||||||||||||| |||||| Sbjct: 6400 gattttggtccctgttctacaata 6377
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 792789 ttccacaatacccgctttat 792808
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 797069 ttccacaatacccgctttat 797088
>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200061 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 agagcttatttacctcacag 201 |||||||||||||||||||| Sbjct: 106374 agagcttatttacctcacag 106355
>emb|AJ299420.1|CRU299420 Capsella rubella ORF1 and ORF2 DNA for hypothetical proteins Length = 5138 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 cttccccgccgatgccatcg 51 |||||||||||||||||||| Sbjct: 434 cttccccgccgatgccatcg 453
>emb|AJ328439.1|HSA328439 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4-AD9RS Length = 715 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cggcggcttaggtgcgtaca 102 |||||||||||||||||||| Sbjct: 11 cggcggcttaggtgcgtaca 30
>emb|AL136501.4|CNS01DW8 Human chromosome 14 DNA sequence BAC R-804L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180583 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tctgctgccatttccctctt 316 |||||||||||||||||||| Sbjct: 46821 tctgctgccatttccctctt 46840
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 835458 ttccacaatacccgctttat 835477
>emb|BX005218.6| Zebrafish DNA sequence from clone CH211-127L12 in linkage group 14, complete sequence Length = 183670 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 atggtgataataaacccaggaaac 455 |||||||||| ||||||||||||| Sbjct: 53021 atggtgataaaaaacccaggaaac 53044
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agcacggtcaaagggaatca 420 |||||||||||||||||||| Sbjct: 72249 agcacggtcaaagggaatca 72230
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 263 gattttggtccctgttccacaata 286 ||||||||||||||||| |||||| Sbjct: 92116 gattttggtccctgttctacaata 92093
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttccacaatacccgctttat 296 |||||||||||||||||||| Sbjct: 762048 ttccacaatacccgctttat 762067 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,339,611 Number of Sequences: 3902068 Number of extensions: 5339611 Number of successful extensions: 95907 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95468 Number of HSP's gapped (non-prelim): 429 length of query: 650 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 627 effective length of database: 17,143,297,704 effective search space: 10748847660408 effective search space used: 10748847660408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
