ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63m01 |
|---|---|
| Clone Library Name | barley_pub |
>CH602_MYCLE (P09239) 60 kDa chaperonin 2 (Protein Cpn60 2) (groEL protein 2)| (65 kDa antigen) Length = 540 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = +3 Query: 228 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIXDWISVLVRV 359 ++G +V + + EAV L E Y LLVS ST+ D + +L +V Sbjct: 197 ISGYFVTDAERQEAV---LEEPYILLVSSKVSTVKDLLPLLEKV 237
>ATG3_NEUCR (Q7SDY2) Autophagy-related protein 3 (Autophagy-related E2-like| conjugation enzyme atg-3) Length = 352 Score = 29.3 bits (64), Expect = 2.3 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 185 DCFDGDAEHQDSIVDGRAMGARDSG 259 D F GDA H++++V+G GA D G Sbjct: 84 DDFAGDAGHEEALVEGNKGGADDDG 108
>CH60_TSUPA (Q9AFA5) 60 kDa chaperonin (Protein Cpn60) (groEL protein) (Heat| shock protein 60) Length = 540 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +3 Query: 228 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIXDWISVLVRV 359 ++G + + + EAV L +AY LLVS ST+ D + +L +V Sbjct: 198 ISGYFATDAERQEAV---LEDAYILLVSSKISTVKDLLPLLEKV 238
>FLIC2_PROMI (P42273) Flagellin 2| Length = 367 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/73 (24%), Positives = 31/73 (42%) Frame = +3 Query: 36 AKVDRLRSTIGSIKAEIRSTIEEIRNGLAIIRAEYEKFERYAXXXXXXXXIASMAMRSIR 215 +KVD RS +G+I+ +STI + N + + A + + ++ Sbjct: 289 SKVDESRSKLGAIQNRFQSTINNLNNTVNNLSASRSRILDADYATEVSNMSKNQILQQAG 348 Query: 216 TASLMAGQWVPET 254 TA L VP+T Sbjct: 349 TAVLAQANQVPQT 361
>COLA_VIBPA (Q56696) Microbial collagenase precursor (EC 3.4.24.3) (prtVp)| Length = 816 Score = 28.9 bits (63), Expect = 3.0 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +3 Query: 240 WVPETQENEAVFDALREAYRLLVSKHFSTIXDWISVLVRV 359 W +T N VF+ALRE RLL S T ++V+ +V Sbjct: 234 WALDTDANFIVFNALRETGRLLASPDQETKRKALAVMQQV 273
>SYI_BORPE (Q7VXK3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 953 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +3 Query: 24 EILTAKVDRLRSTIGSIKAEIRSTIEEIRNGLAIIRAEYEKFERYA 161 E LTAK RLR+ I+AE++ +EE+R+ AI + + + YA Sbjct: 830 EALTAKWTRLRA----IRAEVQRKLEEVRSAGAIGSSLQAEVDLYA 871
>SYI_BORPA (Q7W8Z2) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 953 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +3 Query: 24 EILTAKVDRLRSTIGSIKAEIRSTIEEIRNGLAIIRAEYEKFERYA 161 E LTAK RLR+ I+AE++ +EE+R+ AI + + + YA Sbjct: 830 EALTAKWTRLRA----IRAEVQRKLEEVRSAGAIGSSLQAEVDLYA 871
>SYI_BORBR (Q7WKD5) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 953 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +3 Query: 24 EILTAKVDRLRSTIGSIKAEIRSTIEEIRNGLAIIRAEYEKFERYA 161 E LTAK RLR+ I+AE++ +EE+R+ AI + + + YA Sbjct: 830 EALTAKWTRLRA----IRAEVQRKLEEVRSAGAIGSSLQAEVDLYA 871
>SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/SNF complex| component SNF5) (Transcription factor TYE4) Length = 905 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -2 Query: 306 QGAGTPPSAHQKPPRFPESRAPIARPS 226 Q PP HQ PP P+ PIA S Sbjct: 68 QQTSPPPQTHQSPPPPPQQSQPIANQS 94
>TOM1_HUMAN (O60784) Target of Myb protein 1| Length = 492 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 8/44 (18%) Frame = -3 Query: 131 PDDGQPVADLFDGGPD--------FSLYGSNRGPQPVDLGSQDL 24 P + +P ADL D GPD L G N G V G Q L Sbjct: 313 PSEAEPAADLIDMGPDPAATGNLSSQLAGMNLGSSSVRAGLQSL 356
>TF3B_MOUSE (Q8CFK2) Transcription factor IIIB 90 kDa subunit (TFIIIB90)| (hTFIIIB90) (B-related factor 1) (BRF-1) Length = 676 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Frame = -3 Query: 140 ILGPDDGQPVADLFDGGPDFSLYGSNRGPQP--VDLGSQDLLRACL 9 +LG DDG A DGG S GP P LG D +R C+ Sbjct: 385 LLGDDDGSEAAGDPDGGSRPLALESLLGPLPTAASLGISDSIRECI 430
>ORN_LEIXX (Q6AEG5) Oligoribonuclease (EC 3.1.-.-)| Length = 207 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +3 Query: 96 IEEIRNGLAIIRAEYEKFERYAXXXXXXXXIASMAMRSIRTASLMAGQWVP 248 IEEI G+++ AEYE E Y A +A +I T + +++P Sbjct: 72 IEEIPGGVSLAEAEYEALE-YVLRFAPAARTAPLAGNTIGTDRMFLAKYMP 121
>DSK_DROME (P09040) Drosulfakinins precursor [Contains: Drosulfakinin-0| (DSK-0); Drosulfakinin-1 (Drosulfakinin I) (DSK-I); Drosulfakinin-2 (Drosulfakinin II) (DSK-II)] Length = 141 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 137 LGPDDGQPVADLFDGGPDFSLYGSNRGPQPVDLG 36 +G + QP+A+L GP FSL+G R + + G Sbjct: 52 IGGEIDQPIANLV--GPSFSLFGDRRNQKTMSFG 83
>CH602_MYCTU (P0A520) 60 kDa chaperonin 2 (Protein Cpn60-2) (groEL protein 2)| (65 kDa antigen) (Heat shock protein 65) (Cell wall protein A) (Antigen A) Length = 539 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +3 Query: 228 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIXDWISVLVRV 359 ++G +V + + EAV L + Y LLVS ST+ D + +L +V Sbjct: 197 ISGYFVTDPERQEAV---LEDPYILLVSSKVSTVKDLLPLLEKV 237
>CH602_MYCBO (P0A521) 60 kDa chaperonin 2 (Protein Cpn60-2) (groEL protein 2)| (65 kDa antigen) (Heat shock protein 65) (Cell wall protein A) (Antigen A) Length = 539 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = +3 Query: 228 MAGQWVPETQENEAVFDALREAYRLLVSKHFSTIXDWISVLVRV 359 ++G +V + + EAV L + Y LLVS ST+ D + +L +V Sbjct: 197 ISGYFVTDPERQEAV---LEDPYILLVSSKVSTVKDLLPLLEKV 237
>HTPG_VIBCH (P22359) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 635 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = +3 Query: 3 EGEARTQEILTAKVDRLRSTIGSIKAEIRSTIEEIRNGLAIIRAEYE 143 E T+E + V+RL+ +GS E+R+T + ++ +YE Sbjct: 508 EKHKETEEQFKSVVERLKGYLGSRVKEVRTTFKLANTPAVVVTDDYE 554
>BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor| Length = 1584 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 58 PRLDP*RLKSGPPSKRSATGWPSSGPSMRNSSV 156 P L+P G P + +A PS+GPS +N +V Sbjct: 1430 PNLEPAPPSLGDPGEPAAHPGPSTGPSTKNENV 1462
>CD248_MOUSE (Q91V98) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 765 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 294 TPPSAHQKPPRFPESRAPIARPSTMLS*CSASPS 193 TP A +PP FP S P RP+ S S SP+ Sbjct: 613 TPVPAANQPPAFPSSPLPPQRPTNQTS--SISPT 644
>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)| Length = 939 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 Query: 318 NASIQGAGTPPSAHQKPPRFPESRAPIARPSTMLS*CSASPSKQS 184 ++S G P KPP + API + M S + SP KQ+ Sbjct: 463 SSSANGKFIPSRPAPKPPSSASASAPIIKSPVMNSAANVSPLKQT 507
>XTH32_ARATH (Q9SJL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 32 precursor (EC 2.4.1.207) (At-XTH32) (XTH-32) Length = 299 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%) Frame = -2 Query: 132 PG*WPA-RCGSLRWWTGFQPLW 70 PG WP+ + GSL ++ GF+ LW Sbjct: 30 PGYWPSSKVGSLNFYKGFRNLW 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,299,136 Number of Sequences: 219361 Number of extensions: 1242876 Number of successful extensions: 3794 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3645 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3791 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
