ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63l17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192819.1| Oryza sativa (japonica cultivar-group), predic... 581 e-162
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
3dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
4ref|NM_124696.2| Arabidopsis thaliana FTSH11; ATP-dependent pept... 80 1e-11
5gb|AY123027.1| Arabidopsis thaliana putative FtsH protease (At5g... 80 1e-11
6gb|AY091086.1| Arabidopsis thaliana putative FtsH protease (At5g... 80 1e-11
7emb|AJ786652.1| Pisum sativum mRNA for Ftsh-like protease (ftsh1... 64 6e-07
8gb|AC119382.7| Rattus norvegicus 4 BAC CH230-125G2 (Children's H... 44 0.53
9gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, co... 42 2.1
10gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, co... 42 2.1
11ref|XM_588142.2| PREDICTED: Bos taurus similar to oncoprotein-in... 40 8.3
12ref|XM_546162.2| PREDICTED: Canis familiaris similar to oncoprot... 40 8.3
13gb|U41556.2| Caenorhabditis elegans cosmid C25B8, complete sequence 40 8.3
14gb|BC114018.1| Bos taurus similar to oncoprotein-induced transcr... 40 8.3
15emb|AL157394.15| Human DNA sequence from clone RP11-399O19 on ch... 40 8.3
16dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 8.3
17dbj|AP007152.1| Aspergillus oryzae RIB40 genomic DNA, SC308 40 8.3
18gb|AC021590.10| Homo sapiens chromosome 8, clone RP11-143H8, com... 40 8.3
19ref|NM_001029258.1| Caenorhabditis elegans C25B8.4c (C25B8.4) mR... 40 8.3
20ref|NM_001029257.1| Caenorhabditis elegans C25B8.4b (C25B8.4) mR... 40 8.3
21ref|NM_001029256.1| Caenorhabditis elegans C25B8.4a (C25B8.4) mR... 40 8.3
22gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 8.3
23gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 8.3
24dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.3
25gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 8.3
26emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chr... 40 8.3
27dbj|AP004219.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.3 
>ref|NM_192819.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2100

 Score =  581 bits (293), Expect = e-162
 Identities = 523/599 (87%), Gaps = 3/599 (0%)
 Strand = Plus / Plus

                                                                        
Query: 9    ctgcagcgcttgatcgatgacgccgacgccgaccccaaggaccctgccaagcagagcgcg 68
            ||||||||  ||||||| ||||| |||||| |||||  ||| || |||||||||||||||
Sbjct: 421  ctgcagcggctgatcgacgacgcggacgccaaccccgcggatcccgccaagcagagcgcg 480

                                                                        
Query: 69   ctgctccacgagctcaacaagtttagcccagaggatgtcatcaaaagaatcgagcaaaga 128
            ||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||
Sbjct: 481  ctgctccacgagctcaacaagttcagcccagaagatgtcatcaaaaggttcgagcaaaga 540

                                                                        
Query: 129  agtcatgcggtagatagcaagggggttgcagaatacctacgagctcttattctcaccaac 188
            || ||||| || || ||||  || |||||||||||||| || ||||||||||||||||| 
Sbjct: 541  agccatgctgtggacagcagaggtgttgcagaataccttcgggctcttattctcaccaat 600

                                                                        
Query: 189  gctatagctgattacctaccagatgaacggtctgggcgttcagcaaccctaccagctctg 248
            |  |||||||||||||| ||||| |||| ||||||| | || ||||  || ||||| |||
Sbjct: 601  ggcatagctgattaccttccagacgaacagtctgggaggtctgcaagtctgccagccctg 660

                                                                        
Query: 249  ttgcaagaattgaagcaacgtgtatctggg---gaggacaagcctttctcgaatcctggg 305
             |||||||||||||||||||||||||||||   |||||||||||||||  |||||| || 
Sbjct: 661  ctgcaagaattgaagcaacgtgtatctgggaacgaggacaagcctttcatgaatcccggc 720

                                                                        
Query: 306  atatctgacaagcaaccattacatgtagtaatggttgatcctaaagctactggtagatca 365
            ||||| || |||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 721  atatcagaaaagcaaccattacatgtagttatggttgaccctaaagctacaggtagatca 780

                                                                        
Query: 366  actcggtttgctcaagagattttctcgactatcttgttcacagttgctgttggatttatg 425
            || |||||||||||||| || ||||||||| |  |||| ||| ||||||||||| | |||
Sbjct: 781  acccggtttgctcaagaaatcttctcgactgtgctgtttacaattgctgttggactaatg 840

                                                                        
Query: 426  tgggtaatgggtgctgctgcgcttcagaagtatattggtagcctaggtggaataggcgca 485
            |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||
Sbjct: 841  tgggtaatgggtgctgctgctcttcaaaagtatattggtagcttaggtggaataggggca 900

                                                                        
Query: 486  tctggtgtcggttccagttcatcatattctgcaaaagagttgaataaggatgtaacaccc 545
            |||||||| ||||||||||||||||||||| | ||||| |||||||||||| | |  || 
Sbjct: 901  tctggtgttggttccagttcatcatattctcctaaagaattgaataaggatatcatgccg 960

                                                                       
Query: 546  gagaagaatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaagaaagaact 604
            ||||||||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 961  gagaagaatgtcaagacatttaaagatgtcaaagggtgtgatgacgcaaagaaagaact 1019
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                            
Query: 427      gggtaatgggtgctgctgcgcttcagaagtatattggtagcctaggtggaataggcgcat 486
                ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 24616404 gggtaatgggtgctgctgctcttcaaaagtatattggtagcttaggtggaataggggcat 24616345

                                                                  
Query: 487      ctggtgtcggttccagttcatcatattctgcaaaagagttgaataaggat 536
                ||||||| ||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 24616344 ctggtgttggttccagttcatcatattctcctaaagaattgaataaggat 24616295



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                            
Query: 93       agcccagaggatgtcatcaaaagaatcgagcaaagaagtcatgcggtagatagcaagggg 152
                |||||||| ||||||||||||||  ||||||||||||| ||||| || || ||||  || 
Sbjct: 24618065 agcccagaagatgtcatcaaaaggttcgagcaaagaagccatgctgtggacagcagaggt 24618006

                                                                            
Query: 153      gttgcagaatacctacgagctcttattctcaccaacgctatagctgattacctaccagat 212
                |||||||||||||| || ||||||||||||||||| |  |||||||||||||| ||||| 
Sbjct: 24618005 gttgcagaataccttcgggctcttattctcaccaatggcatagctgattaccttccagac 24617946

                            
Query: 213      gaacggtctggg 224
                |||| |||||||
Sbjct: 24617945 gaacagtctggg 24617934



 Score =  103 bits (52), Expect = 7e-19
 Identities = 84/94 (89%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                            
Query: 250      tgcaagaattgaagcaacgtgtatctggg---gaggacaagcctttctcgaatcctggga 306
                |||||||||||||||||||||||||||||   |||||||||||||||  |||||| || |
Sbjct: 24617395 tgcaagaattgaagcaacgtgtatctgggaacgaggacaagcctttcatgaatcccggca 24617336

                                                  
Query: 307      tatctgacaagcaaccattacatgtagtaatggt 340
                |||| || |||||||||||||||||||| |||||
Sbjct: 24617335 tatcagaaaagcaaccattacatgtagttatggt 24617302



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 9        ctgcagcgcttgatcgatgacgccgacgccgaccccaaggaccctgccaagcagagcgcg 68
                ||||||||  ||||||| ||||| |||||| |||||  ||| || |||||||||||||||
Sbjct: 24618758 ctgcagcggctgatcgacgacgcggacgccaaccccgcggatcccgccaagcagagcgcg 24618699

                                       
Query: 69       ctgctccacgagctcaacaagtt 91
                |||||||||||||||||||||||
Sbjct: 24618698 ctgctccacgagctcaacaagtt 24618676



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                            
Query: 338      ggttgatcctaaagctactggtagatcaactcggtttgctcaagagattttctcgactat 397
                |||||| ||||||||||| ||||||||||| |||||||||||||| || ||||||||| |
Sbjct: 24616921 ggttgaccctaaagctacaggtagatcaacccggtttgctcaagaaatcttctcgactgt 24616862

                                               
Query: 398      cttgttcacagttgctgttggatttatgtgg 428
                  |||| ||| ||||||||||| | ||||||
Sbjct: 24616861 gctgtttacaattgctgttggactaatgtgg 24616831



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                       
Query: 550      agaatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaagaaagaact 604
                ||||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 24616067 agaatgtcaagacatttaaagatgtcaaagggtgtgatgacgcaaagaaagaact 24616013
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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1040D09
          Length = 148102

 Score =  155 bits (78), Expect = 2e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                         
Query: 427   gggtaatgggtgctgctgcgcttcagaagtatattggtagcctaggtggaataggcgcat 486
             ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||
Sbjct: 42367 gggtaatgggtgctgctgctcttcaaaagtatattggtagcttaggtggaataggggcat 42308

                                                               
Query: 487   ctggtgtcggttccagttcatcatattctgcaaaagagttgaataaggat 536
             ||||||| ||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 42307 ctggtgttggttccagttcatcatattctcctaaagaattgaataaggat 42258



 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                         
Query: 93    agcccagaggatgtcatcaaaagaatcgagcaaagaagtcatgcggtagatagcaagggg 152
             |||||||| ||||||||||||||  ||||||||||||| ||||| || || ||||  || 
Sbjct: 44028 agcccagaagatgtcatcaaaaggttcgagcaaagaagccatgctgtggacagcagaggt 43969

                                                                         
Query: 153   gttgcagaatacctacgagctcttattctcaccaacgctatagctgattacctaccagat 212
             |||||||||||||| || ||||||||||||||||| |  |||||||||||||| ||||| 
Sbjct: 43968 gttgcagaataccttcgggctcttattctcaccaatggcatagctgattaccttccagac 43909

                         
Query: 213   gaacggtctggg 224
             |||| |||||||
Sbjct: 43908 gaacagtctggg 43897



 Score =  103 bits (52), Expect = 7e-19
 Identities = 84/94 (89%), Gaps = 3/94 (3%)
 Strand = Plus / Minus

                                                                         
Query: 250   tgcaagaattgaagcaacgtgtatctggg---gaggacaagcctttctcgaatcctggga 306
             |||||||||||||||||||||||||||||   |||||||||||||||  |||||| || |
Sbjct: 43358 tgcaagaattgaagcaacgtgtatctgggaacgaggacaagcctttcatgaatcccggca 43299

                                               
Query: 307   tatctgacaagcaaccattacatgtagtaatggt 340
             |||| || |||||||||||||||||||| |||||
Sbjct: 43298 tatcagaaaagcaaccattacatgtagttatggt 43265



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 9     ctgcagcgcttgatcgatgacgccgacgccgaccccaaggaccctgccaagcagagcgcg 68
             ||||||||  ||||||| ||||| |||||| |||||  ||| || |||||||||||||||
Sbjct: 44721 ctgcagcggctgatcgacgacgcggacgccaaccccgcggatcccgccaagcagagcgcg 44662

                                    
Query: 69    ctgctccacgagctcaacaagtt 91
             |||||||||||||||||||||||
Sbjct: 44661 ctgctccacgagctcaacaagtt 44639



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                         
Query: 338   ggttgatcctaaagctactggtagatcaactcggtttgctcaagagattttctcgactat 397
             |||||| ||||||||||| ||||||||||| |||||||||||||| || ||||||||| |
Sbjct: 42884 ggttgaccctaaagctacaggtagatcaacccggtttgctcaagaaatcttctcgactgt 42825

                                            
Query: 398   cttgttcacagttgctgttggatttatgtgg 428
               |||| ||| ||||||||||| | ||||||
Sbjct: 42824 gctgtttacaattgctgttggactaatgtgg 42794



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 550   agaatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaagaaagaact 604
             ||||||| ||||||||||| ||||||||||| ||||| || ||||||||||||||
Sbjct: 42030 agaatgtcaagacatttaaagatgtcaaagggtgtgatgacgcaaagaaagaact 41976
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>ref|NM_124696.2| Arabidopsis thaliana FTSH11; ATP-dependent peptidase/ ATPase/
            metallopeptidase AT5G53170 (FTSH11) mRNA, complete cds
          Length = 2778

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 178/224 (79%)
 Strand = Plus / Plus

                                                                        
Query: 372  tttgctcaagagattttctcgactatcttgttcacagttgctgttggatttatgtgggta 431
            ||||| |||||| || |||| || ||||||||||| ||||| || |||||  ||||| | 
Sbjct: 970  tttgcgcaagagcttgtctctacgatcttgttcactgttgcggtgggattagtgtggatt 1029

                                                                        
Query: 432  atgggtgctgctgcgcttcagaagtatattggtagcctaggtggaataggcgcatctggt 491
            |||||||| ||||| || || ||||||||||| || || || ||||| ||  | || |||
Sbjct: 1030 atgggtgcagctgctctgcaaaagtatattggaagtcttggaggaattggaacttcgggt 1089

                                                                        
Query: 492  gtcggttccagttcatcatattctgcaaaagagttgaataaggatgtaacacccgagaag 551
            || ||||| || || ||||||||  |||||||| |||| || ||  |||| || || |||
Sbjct: 1090 gttggttcaagctcttcatattccccaaaagagctgaacaaagaaataacgccagaaaag 1149

                                                        
Query: 552  aatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaa 595
            ||||| || ||||||||||| || || || ||||| ||||||||
Sbjct: 1150 aatgtcaaaacatttaaggacgtaaagggttgtgatgatgcaaa 1193
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>gb|AY123027.1| Arabidopsis thaliana putative FtsH protease (At5g53170) mRNA,
            complete cds
          Length = 2452

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 178/224 (79%)
 Strand = Plus / Plus

                                                                        
Query: 372  tttgctcaagagattttctcgactatcttgttcacagttgctgttggatttatgtgggta 431
            ||||| |||||| || |||| || ||||||||||| ||||| || |||||  ||||| | 
Sbjct: 889  tttgcgcaagagcttgtctctacgatcttgttcactgttgcggtgggattagtgtggatt 948

                                                                        
Query: 432  atgggtgctgctgcgcttcagaagtatattggtagcctaggtggaataggcgcatctggt 491
            |||||||| ||||| || || ||||||||||| || || || ||||| ||  | || |||
Sbjct: 949  atgggtgcagctgctctgcaaaagtatattggaagtcttggaggaattggaacttcgggt 1008

                                                                        
Query: 492  gtcggttccagttcatcatattctgcaaaagagttgaataaggatgtaacacccgagaag 551
            || ||||| || || ||||||||  |||||||| |||| || ||  |||| || || |||
Sbjct: 1009 gttggttcaagctcttcatattccccaaaagagctgaacaaagaaataacgccagaaaag 1068

                                                        
Query: 552  aatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaa 595
            ||||| || ||||||||||| || || || ||||| ||||||||
Sbjct: 1069 aatgtcaaaacatttaaggacgtaaagggttgtgatgatgcaaa 1112
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>gb|AY091086.1| Arabidopsis thaliana putative FtsH protease (At5g53170) mRNA,
            complete cds
          Length = 2715

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 178/224 (79%)
 Strand = Plus / Plus

                                                                        
Query: 372  tttgctcaagagattttctcgactatcttgttcacagttgctgttggatttatgtgggta 431
            ||||| |||||| || |||| || ||||||||||| ||||| || |||||  ||||| | 
Sbjct: 918  tttgcgcaagagcttgtctctacgatcttgttcactgttgcggtgggattagtgtggatt 977

                                                                        
Query: 432  atgggtgctgctgcgcttcagaagtatattggtagcctaggtggaataggcgcatctggt 491
            |||||||| ||||| || || ||||||||||| || || || ||||| ||  | || |||
Sbjct: 978  atgggtgcagctgctctgcaaaagtatattggaagtcttggaggaattggaacttcgggt 1037

                                                                        
Query: 492  gtcggttccagttcatcatattctgcaaaagagttgaataaggatgtaacacccgagaag 551
            || ||||| || || ||||||||  |||||||| |||| || ||  |||| || || |||
Sbjct: 1038 gttggttcaagctcttcatattccccaaaagagctgaacaaagaaataacgccagaaaag 1097

                                                        
Query: 552  aatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaa 595
            ||||| || ||||||||||| || || || ||||| ||||||||
Sbjct: 1098 aatgtcaaaacatttaaggacgtaaagggttgtgatgatgcaaa 1141
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>emb|AJ786652.1| Pisum sativum mRNA for Ftsh-like protease (ftsh11 gene)
          Length = 2769

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                        
Query: 549  aagaatgtgaagacatttaaggatgtcaaaggctgtgacgatgcaaagaaagaacttgag 608
            |||||||| || || ||||||||||| ||||| ||||| ||||||||| |||||||||||
Sbjct: 1098 aagaatgtaaaaacttttaaggatgtgaaaggttgtgatgatgcaaagcaagaacttgag 1157
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>gb|AC119382.7| Rattus norvegicus 4 BAC CH230-125G2 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 189442

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 551    gaatgtgaagacatttaaggat 572
              ||||||||||||||||||||||
Sbjct: 110377 gaatgtgaagacatttaaggat 110356
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>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence
          Length = 211296

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    ctgttgcaagaattgaagcaa 266
              |||||||||||||||||||||
Sbjct: 163983 ctgttgcaagaattgaagcaa 164003
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>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence
          Length = 319367

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    ctgttgcaagaattgaagcaa 266
              |||||||||||||||||||||
Sbjct: 255190 ctgttgcaagaattgaagcaa 255210
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>ref|XM_588142.2| PREDICTED: Bos taurus similar to oncoprotein-induced transcript 3
           (LOC510915), partial mRNA
          Length = 2048

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 553 atgtgaagacatttaaggatgtca 576
           ||||||||||||| ||||||||||
Sbjct: 448 atgtgaagacattgaaggatgtca 471
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>ref|XM_546162.2| PREDICTED: Canis familiaris similar to oncoprotein-induced transcript
            3 (LOC489044), mRNA
          Length = 1998

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 553  atgtgaagacatttaaggatgtca 576
            ||||||||||||| ||||||||||
Sbjct: 1017 atgtgaagacattgaaggatgtca 1040
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>gb|U41556.2| Caenorhabditis elegans cosmid C25B8, complete sequence
          Length = 35814

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   atcaactcggtttgctcaag 381
             ||||||||||||||||||||
Sbjct: 13706 atcaactcggtttgctcaag 13687
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>gb|BC114018.1| Bos taurus similar to oncoprotein-induced transcript 3, mRNA (cDNA
           clone MGC:137297 IMAGE:8012239), complete cds
          Length = 2354

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 553 atgtgaagacatttaaggatgtca 576
           ||||||||||||| ||||||||||
Sbjct: 721 atgtgaagacattgaaggatgtca 744
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>emb|AL157394.15| Human DNA sequence from clone RP11-399O19 on chromosome 10 Contains the
              5' end of a novel gene (MGC22805), a novel pseudogene
              (FLJ12598), the gene for a novel Mov34/MPN/PAD-1 family
              domain containing protein (KIAA1373 FLJ35627 FLJ33359), a
              novel gene (FLJ36021), the ACTA2 gene for actin alpha 2
              smooth muscle aorta, the TNFRSF6 gene for tumor necrosis
              factor receptor superfamily member 6 and two CpG islands,
              complete sequence
          Length = 187313

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    aagaatgtgaagacatttaa 568
              ||||||||||||||||||||
Sbjct: 181149 aagaatgtgaagacatttaa 181168
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 1       gccgccgcctgcagcgcttgatcg 24
               ||||||||| ||||||||||||||
Sbjct: 4449305 gccgccgccagcagcgcttgatcg 4449328



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 1       gccgccgcctgcagcgcttgatcg 24
               ||||||||| ||||||||||||||
Sbjct: 2830770 gccgccgccagcagcgcttgatcg 2830793
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>dbj|AP007152.1| Aspergillus oryzae RIB40 genomic DNA, SC308
          Length = 51359

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   caaaagagttgaataaggat 536
             ||||||||||||||||||||
Sbjct: 24933 caaaagagttgaataaggat 24952
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>gb|AC021590.10| Homo sapiens chromosome 8, clone RP11-143H8, complete sequence
          Length = 171427

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    ctgacaagcaaccattacat 329
              ||||||||||||||||||||
Sbjct: 105415 ctgacaagcaaccattacat 105396
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>ref|NM_001029258.1| Caenorhabditis elegans C25B8.4c (C25B8.4) mRNA, complete cds
          Length = 475

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 atcaactcggtttgctcaag 381
           ||||||||||||||||||||
Sbjct: 88  atcaactcggtttgctcaag 107
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>ref|NM_001029257.1| Caenorhabditis elegans C25B8.4b (C25B8.4) mRNA, complete cds
          Length = 762

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 atcaactcggtttgctcaag 381
           ||||||||||||||||||||
Sbjct: 174 atcaactcggtttgctcaag 193
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>ref|NM_001029256.1| Caenorhabditis elegans C25B8.4a (C25B8.4) mRNA, complete cds
          Length = 752

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 atcaactcggtttgctcaag 381
           ||||||||||||||||||||
Sbjct: 51  atcaactcggtttgctcaag 70
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     tgttgcaagaattgaagcaa 266
               ||||||||||||||||||||
Sbjct: 1475072 tgttgcaagaattgaagcaa 1475053
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 1       gccgccgcctgcagcgcttgatcg 24
               ||||||||| ||||||||||||||
Sbjct: 4451867 gccgccgccagcagcgcttgatcg 4451890



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 1       gccgccgcctgcagcgcttgatcg 24
               ||||||||| ||||||||||||||
Sbjct: 2854428 gccgccgccagcagcgcttgatcg 2854405
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>dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1942A3, complete
             sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   ctgacaagcaaccattacat 329
             ||||||||||||||||||||
Sbjct: 28793 ctgacaagcaaccattacat 28774
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 27      gacgccgacgccgaccccaa 46
               ||||||||||||||||||||
Sbjct: 1653331 gacgccgacgccgaccccaa 1653312
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>emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chromosome 17, complete
             sequence
          Length = 164668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    cgccgacgccgaccccaagg 48
             ||||||||||||||||||||
Sbjct: 13646 cgccgacgccgaccccaagg 13627
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>dbj|AP004219.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1222D11, complete
             sequence
          Length = 159712

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   ctgacaagcaaccattacat 329
             ||||||||||||||||||||
Sbjct: 90754 ctgacaagcaaccattacat 90735


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,556,617
Number of Sequences: 3902068
Number of extensions: 4556617
Number of successful extensions: 89376
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88987
Number of HSP's gapped (non-prelim): 386
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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