ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bah63l11 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 274 bits (701), Expect = 9e-74 Identities = 130/143 (90%), Positives = 134/143 (93%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 GKAVK+LPSSAL G+ARV MRKTAAKAK V PWYGSDRVLYLGPLSG+PPSYLTGEF Sbjct: 15 GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEA WFKA Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKA 134 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFS+GGLDYLGNP LVHAQS Sbjct: 135 GSQIFSDGGLDYLGNPSLVHAQS 157
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 263 bits (672), Expect = 2e-70 Identities = 129/144 (89%), Positives = 134/144 (93%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAV ++PSS+ FGEARVTMRKTAAKAKP PWYG DRVLYLGPLSG+PPSYLTGE Sbjct: 15 GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP L+HAQS Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQS 156
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 260 bits (665), Expect = 1e-69 Identities = 129/144 (89%), Positives = 133/144 (92%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAV ++PSS LFGEARVTMRKTAAKAKP PWYG DRVLYLGPLSG+PPSYLTGE Sbjct: 15 GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP L+HAQS Sbjct: 133 AGSQIFSEGGLDYLGNPSLIHAQS 156
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 259 bits (661), Expect = 4e-69 Identities = 123/136 (90%), Positives = 127/136 (93%), Gaps = 1/136 (0%) Frame = +3 Query: 120 SSALFGEARVTMRKTAAKAKPVXXX-XPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 296 SSALFGEAR+TMRKTAAK KP PWYG+DRVLYLGPLSG+PPSYLTGEFPGDYGWD Sbjct: 21 SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80 Query: 297 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 476 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE Sbjct: 81 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 140 Query: 477 GGLDYLGNPXLVHAQS 524 GGLDYLGNP L+HAQS Sbjct: 141 GGLDYLGNPSLIHAQS 156
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 257 bits (657), Expect = 1e-68 Identities = 124/144 (86%), Positives = 129/144 (89%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G +VTMRKTA+KAKPV PWYG DRV YLGP SG+ PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQS 157
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 257 bits (656), Expect = 2e-68 Identities = 124/144 (86%), Positives = 127/144 (88%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G RVTMRKTA KAKP PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 256 bits (654), Expect = 3e-68 Identities = 124/144 (86%), Positives = 128/144 (88%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G +VTMRKTA KAKPV PWYG DRV YLGP SG+ PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 134 AGSQIFSEGGLDYLGNPSLVHAQS 157 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/50 (34%), Positives = 25/50 (50%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG +D GL+ DPE FA+ + E+ + R AM G L+ G Sbjct: 190 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKG 238
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 254 bits (650), Expect = 8e-68 Identities = 122/144 (84%), Positives = 127/144 (88%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G +VTMRKT KAKP+ PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 254 bits (650), Expect = 8e-68 Identities = 123/144 (85%), Positives = 128/144 (88%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G +VTMRKTA+KAK V PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 254 bits (650), Expect = 8e-68 Identities = 117/135 (86%), Positives = 125/135 (92%) Frame = +3 Query: 120 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 299 ++ +FGE R+TMRK+AAK KP PWYG+DRVLYLGPLSG+PPSYLTGEFPGDYGWDT Sbjct: 18 AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77 Query: 300 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 479 AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG Sbjct: 78 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 137 Query: 480 GLDYLGNPXLVHAQS 524 GLDYLGNP L+HAQS Sbjct: 138 GLDYLGNPSLIHAQS 152
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 253 bits (647), Expect = 2e-67 Identities = 121/144 (84%), Positives = 128/144 (88%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G +VTMRKTA+KAKPV PWYG +RV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFS+GGLDYLGNP LVHAQS Sbjct: 135 GGSQIFSQGGLDYLGNPSLVHAQS 158 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG +D GL+ DPE FA+ + E+ + R AM G ++ G Sbjct: 191 YPGG-SFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 239
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 253 bits (646), Expect = 2e-67 Identities = 122/144 (84%), Positives = 126/144 (87%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK P+ S + GE R+TMRKTA K K V PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 251 bits (642), Expect = 7e-67 Identities = 119/143 (83%), Positives = 122/143 (85%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 GKAV SS + G + TMRKT KAKPV PWYG DRV YLGP SG+ PSYLTGEF Sbjct: 15 GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVWFKA Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKA 134 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 GSQIFSEGGLDYLGNPSLVHAQS 157
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 251 bits (642), Expect = 7e-67 Identities = 121/144 (84%), Positives = 125/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ + G + TMRKT KAKPV PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 250 bits (639), Expect = 1e-66 Identities = 120/144 (83%), Positives = 124/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GK VK PSS+ + G + TMRKTA KAKPV PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNGVKFGEAVW K Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 250 bits (638), Expect = 2e-66 Identities = 120/144 (83%), Positives = 124/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 G AVK PSS+ + G + MRKT KAKPV PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGSQIFSEGGLDYLGNPSLVHAQS 158 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +3 Query: 237 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 416 ++G P +T +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 178 VAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 417 NG 422 G Sbjct: 238 KG 239
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 248 bits (632), Expect = 9e-66 Identities = 121/144 (84%), Positives = 125/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLP-SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK P +S +FG RVTMRKT P PWYGSDRV YLGP SG+PPSYLTGE Sbjct: 15 GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQS 156
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 247 bits (630), Expect = 2e-65 Identities = 117/144 (81%), Positives = 122/144 (84%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVK-DLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK SS + G +VTMRKT KAKP PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KFGEAVWFK Sbjct: 75 FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFK 134 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AG+QIFSEGGLDYLGNP LVHAQS Sbjct: 135 AGAQIFSEGGLDYLGNPSLVHAQS 158
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 245 bits (626), Expect = 5e-65 Identities = 120/144 (83%), Positives = 125/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 G+AVK PS+ + G RV+MRKT AK PV PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GQAVKLSPSAPEITGNGRVSMRKTVAK--PVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQS 156
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 244 bits (623), Expect = 1e-64 Identities = 119/144 (82%), Positives = 124/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 G+AVK PS S + G R+TMRK AK+ P PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 132 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 133 AGSQIFSEGGLDYLGNPSLVHAQS 156
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 243 bits (620), Expect = 2e-64 Identities = 115/143 (80%), Positives = 119/143 (83%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 GKAV SS + +VTMRKT KAKPV PWYG DRV YLGP SG+ PSYLTGEF Sbjct: 15 GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARNGVKFGEAVWFKA Sbjct: 75 PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKA 134 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 GSQIF EGGLDYLGNP LVHAQS Sbjct: 135 GSQIFKEGGLDYLGNPSLVHAQS 157
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 243 bits (620), Expect = 2e-64 Identities = 112/131 (85%), Positives = 116/131 (88%) Frame = +3 Query: 132 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 FGE R+TMRKT K K PWYG DRV YLGP SG+PPSYLTGEFPGDYGWDTAGLS Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 83 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDY 142 Query: 492 LGNPXLVHAQS 524 LGNP L+HAQS Sbjct: 143 LGNPSLIHAQS 153
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 241 bits (616), Expect = 7e-64 Identities = 120/144 (83%), Positives = 123/144 (85%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK PSS+ LFG RV+MRKT K PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 131 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 132 AGSQIFSEGGLDYLGNPSLVHAQS 155
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 240 bits (613), Expect = 1e-63 Identities = 119/144 (82%), Positives = 124/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK P+ S + G RVTMRKT AK K PWYGSDRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFS+GGLDYLGNP LVHAQS Sbjct: 134 AGSQIFSDGGLDYLGNPSLVHAQS 157
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 240 bits (613), Expect = 1e-63 Identities = 114/135 (84%), Positives = 118/135 (87%), Gaps = 1/135 (0%) Frame = +3 Query: 123 SALFGEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 299 + + GEARVTMRK T K PWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90 Query: 300 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 479 AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEG Sbjct: 91 AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEG 150 Query: 480 GLDYLGNPXLVHAQS 524 GLDYLGNP LVHAQS Sbjct: 151 GLDYLGNPSLVHAQS 165 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +3 Query: 237 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 416 ++G P +T +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 185 IAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 244 Query: 417 NG 422 G Sbjct: 245 KG 246
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 240 bits (612), Expect = 2e-63 Identities = 115/143 (80%), Positives = 120/143 (83%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 GK +K PSS G AR TMRK+A K PWYG DRV YLGP SG+ PSYLTGEF Sbjct: 18 GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA Sbjct: 78 PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 137 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFSEGGLDYLGNP LVHAQS Sbjct: 138 GSQIFSEGGLDYLGNPSLVHAQS 160
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 240 bits (612), Expect = 2e-63 Identities = 111/132 (84%), Positives = 116/132 (87%) Frame = +3 Query: 129 LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGL 308 +FGE R+TMRKTAAK KP PWYG+DRVLYLGPLSG PPSYLTGEFPGDYGWDT GL Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83 Query: 309 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLD 488 SADPETFAKNRELEVIHCRWA+ LGCVFPELLARNGVKFGE VWFKAGSQIFSEGGL Sbjct: 84 SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLS 143 Query: 489 YLGNPXLVHAQS 524 + GNP LVHAQS Sbjct: 144 HPGNPSLVHAQS 155
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 239 bits (611), Expect = 3e-63 Identities = 117/144 (81%), Positives = 126/144 (87%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 G+AVK P++ + G A+ TMRKTA+K+ V PWYG DRV YLGP SG+PPSYLTGE Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFK Sbjct: 63 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFK 122 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFSEGGLDYLGNP LVHAQS Sbjct: 123 AGSQIFSEGGLDYLGNPSLVHAQS 146
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 238 bits (608), Expect = 6e-63 Identities = 118/144 (81%), Positives = 123/144 (85%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAV P+ S + G RVTMRKT AK K PWYGSDRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGS-PWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFK 133 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 AGSQIFS+GGLDYLGNP LVHAQS Sbjct: 134 AGSQIFSDGGLDYLGNPSLVHAQS 157
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 238 bits (607), Expect = 7e-63 Identities = 119/144 (82%), Positives = 125/144 (86%), Gaps = 1/144 (0%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 GKAVK+L SS+ + G+ARV+MRKTAA K PWYG DRV YLGP SG+ PSYLTGE Sbjct: 15 GKAVKNLSSSSEVQGDARVSMRKTAATKK---VGSPWYGPDRVKYLGPFSGESPSYLTGE 71 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFK Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFK 131 Query: 453 AGSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFSEGGL YLGNP LVHAQS Sbjct: 132 KGSQIFSEGGLQYLGNPSLVHAQS 155
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 237 bits (604), Expect = 2e-62 Identities = 117/143 (81%), Positives = 122/143 (85%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 GKAVK PS+ G RV+MRKT K V PWYG DRV YLGP SG+PPSYLTGEF Sbjct: 16 GKAVKLGPSAPEVG--RVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKA Sbjct: 72 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKA 131 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFSEGGLDYLGNP L+HAQS Sbjct: 132 GSQIFSEGGLDYLGNPSLIHAQS 154
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 236 bits (602), Expect = 3e-62 Identities = 112/136 (82%), Positives = 116/136 (85%) Frame = +3 Query: 117 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 296 PSS G AR TMRK+A K PWYG DRV YLGP SG+ PSYLTGEFPGDYGWD Sbjct: 24 PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83 Query: 297 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 476 TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSE Sbjct: 84 TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSE 143 Query: 477 GGLDYLGNPXLVHAQS 524 GGLDYLGNP LVHAQS Sbjct: 144 GGLDYLGNPSLVHAQS 159
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 234 bits (598), Expect = 8e-62 Identities = 111/131 (84%), Positives = 117/131 (89%), Gaps = 1/131 (0%) Frame = +3 Query: 135 GEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 GEAR+TMRK T K+ PWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDY Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 158 Query: 492 LGNPXLVHAQS 524 LG+P L+HAQS Sbjct: 159 LGSPQLIHAQS 169
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 234 bits (596), Expect = 1e-61 Identities = 110/131 (83%), Positives = 117/131 (89%), Gaps = 1/131 (0%) Frame = +3 Query: 135 GEARVTMRK-TAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 GEAR+TMRK T K+ PWYG DRV+YLGP SG+PPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDY Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDY 158 Query: 492 LGNPXLVHAQS 524 LG+P L+HAQS Sbjct: 159 LGSPQLIHAQS 169
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 234 bits (596), Expect = 1e-61 Identities = 112/136 (82%), Positives = 117/136 (86%) Frame = +3 Query: 117 PSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 296 PS+ G RV+MRKTA+K V PWYG DRV YLGP SG+PPSYLTGEFPGDYGWD Sbjct: 3 PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60 Query: 297 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 476 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGSQIFSE Sbjct: 61 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSE 120 Query: 477 GGLDYLGNPXLVHAQS 524 GGLDYLGN L+HAQS Sbjct: 121 GGLDYLGNQSLIHAQS 136
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 223 bits (567), Expect = 3e-58 Identities = 110/142 (77%), Positives = 115/142 (80%) Frame = +3 Query: 99 KAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFP 278 K V +L GEARV M +KA WYGSDR LYLGP SG PPSYL+GEFP Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74 Query: 279 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 458 GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG Sbjct: 75 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 134 Query: 459 SQIFSEGGLDYLGNPXLVHAQS 524 SQIF+EGGLDYLGNP LVHAQS Sbjct: 135 SQIFAEGGLDYLGNPSLVHAQS 156
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 222 bits (566), Expect = 4e-58 Identities = 105/131 (80%), Positives = 111/131 (84%) Frame = +3 Query: 132 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 FGE R+TMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGEGRITMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDY 145 Query: 492 LGNPXLVHAQS 524 LGNP LVHAQS Sbjct: 146 LGNPNLVHAQS 156
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 217 bits (552), Expect = 2e-56 Identities = 104/130 (80%), Positives = 111/130 (85%) Frame = +3 Query: 135 GEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSA 314 G RV+MR+T K+ P WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSA Sbjct: 31 GGGRVSMRRTV-KSAPTSI---WYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 315 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYL 494 DPETFAKNRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDYL Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL 146 Query: 495 GNPXLVHAQS 524 GNP L+HAQS Sbjct: 147 GNPNLIHAQS 156
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 216 bits (549), Expect = 4e-56 Identities = 102/131 (77%), Positives = 108/131 (82%) Frame = +3 Query: 132 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 FG R TMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDY 145 Query: 492 LGNPXLVHAQS 524 LGNP L+HAQS Sbjct: 146 LGNPNLIHAQS 156
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 216 bits (549), Expect = 4e-56 Identities = 102/131 (77%), Positives = 108/131 (82%) Frame = +3 Query: 132 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 F R TMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FNGGRATMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDY Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDY 145 Query: 492 LGNPXLVHAQS 524 LGNP L+HAQS Sbjct: 146 LGNPNLIHAQS 156
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 215 bits (548), Expect = 5e-56 Identities = 100/116 (86%), Positives = 103/116 (88%) Frame = +3 Query: 177 KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 356 K PW+G D V YLGP SG+ PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 357 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPXLVHAQS 524 H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQS Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 119
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 215 bits (548), Expect = 5e-56 Identities = 104/127 (81%), Positives = 107/127 (84%) Frame = +3 Query: 144 RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 323 RV+MR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 33 RVSMRRTIKSAPESI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88 Query: 324 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 503 TFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAGSQIF EGGLDYLGNP Sbjct: 89 TFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNP 148 Query: 504 XLVHAQS 524 LVHAQS Sbjct: 149 NLVHAQS 155
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 214 bits (545), Expect = 1e-55 Identities = 102/131 (77%), Positives = 108/131 (82%) Frame = +3 Query: 132 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 F RVTMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQSI----WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDY Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDY 117 Query: 492 LGNPXLVHAQS 524 LGNP L+HAQS Sbjct: 118 LGNPNLIHAQS 128
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 213 bits (542), Expect = 3e-55 Identities = 102/131 (77%), Positives = 108/131 (82%) Frame = +3 Query: 132 FGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 FG+AR TMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGQARFTMRRTVKSAPESI----WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 312 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDY 491 ADPETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGEAVWFKAGSQIF+EGGLDY Sbjct: 86 ADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDY 145 Query: 492 LGNPXLVHAQS 524 LGNP L+HAQS Sbjct: 146 LGNPNLIHAQS 156
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 212 bits (540), Expect = 4e-55 Identities = 100/129 (77%), Positives = 108/129 (83%) Frame = +3 Query: 138 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 +AR+TMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPESI----WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 318 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 497 PETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG+QIFSEGGLDY G Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAG 148 Query: 498 NPXLVHAQS 524 NP L+HAQS Sbjct: 149 NPNLIHAQS 157
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 210 bits (535), Expect = 2e-54 Identities = 100/127 (78%), Positives = 107/127 (84%) Frame = +3 Query: 144 RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE 323 R+TMR+T A WYG DR YLGP S PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQSI----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 324 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 503 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNP 147 Query: 504 XLVHAQS 524 LVHAQS Sbjct: 148 NLVHAQS 154
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 210 bits (535), Expect = 2e-54 Identities = 103/143 (72%), Positives = 116/143 (81%), Gaps = 1/143 (0%) Frame = +3 Query: 99 KAVKDLPSSALFG-EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 K V +L L EARVTMR+T +K+ WYG+DR +LGP SG+ PSYL GEF Sbjct: 19 KPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEF 76 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++GVKFGEAVWFKA Sbjct: 77 AGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKA 136 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 G+QIFSEGGLDYLGNP LVHAQS Sbjct: 137 GAQIFSEGGLDYLGNPSLVHAQS 159 Score = 29.6 bits (65), Expect = 5.3 Identities = 17/62 (27%), Positives = 29/62 (46%) Frame = +3 Query: 237 LSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 416 ++G P +T +D GL+ DP+TFA+ + E+ + R AM G ++ Sbjct: 179 VAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 238 Query: 417 NG 422 G Sbjct: 239 KG 240
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 209 bits (532), Expect = 4e-54 Identities = 107/143 (74%), Positives = 113/143 (79%) Frame = +3 Query: 96 GKAVKDLPSSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEF 275 G+A+K PS+ G RV+MRKTA K V PWYG DRV YLGP SG+ PSYLTGEF Sbjct: 15 GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72 Query: 276 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 455 G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA Sbjct: 73 HG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 124 Query: 456 GSQIFSEGGLDYLGNPXLVHAQS 524 GSQIFSEGGLDYLGNP L+HAQS Sbjct: 125 GSQIFSEGGLDYLGNPSLIHAQS 147
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 208 bits (529), Expect = 8e-54 Identities = 100/129 (77%), Positives = 110/129 (85%) Frame = +3 Query: 138 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 + R +MR+T KA P WYG+DR +LGP S PSYLTGEFPGDYGWDTAGLSAD Sbjct: 31 DGRFSMRRTV-KAVPQSI---WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86 Query: 318 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLG 497 PETFAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGEAVWFKAG+QIFSEGGLDYLG Sbjct: 87 PETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLG 146 Query: 498 NPXLVHAQS 524 NP LVHAQS Sbjct: 147 NPNLVHAQS 155
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 196 bits (499), Expect = 2e-50 Identities = 91/97 (93%), Positives = 93/97 (95%) Frame = +3 Query: 234 PLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 413 P SG+PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 414 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPXLVHAQS 524 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNP LVHAQS Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQS 97
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 188 bits (477), Expect = 9e-48 Identities = 94/135 (69%), Positives = 107/135 (79%), Gaps = 2/135 (1%) Frame = +3 Query: 126 ALFGEARVTMRKTAAKAK-PVXXXXPWYGSDRVLYLGPLSGDP-PSYLTGEFPGDYGWDT 299 AL + T +KTAAKA P +YG +R +LGP S + P+YLTGEFPGDYGWDT Sbjct: 10 ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69 Query: 300 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 479 AGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG+QIFSEG Sbjct: 70 AGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEG 129 Query: 480 GLDYLGNPXLVHAQS 524 GLDYLGNP LVHAQ+ Sbjct: 130 GLDYLGNPSLVHAQN 144
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 187 bits (474), Expect = 2e-47 Identities = 89/109 (81%), Positives = 93/109 (85%), Gaps = 1/109 (0%) Frame = +3 Query: 201 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 380 WYG DRV YLGP S PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG Sbjct: 50 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109 Query: 381 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPXLVHAQS 524 ALGCVFPE+L + GV+F E VWFKAGSQIFSEGGLDYLGNP LVHAQS Sbjct: 110 ALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQS 158 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 184 bits (467), Expect = 1e-46 Identities = 97/135 (71%), Positives = 102/135 (75%) Frame = +3 Query: 120 SSALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 299 SS L A TM K AAK+K RV YLGP SG+ PSYLTGEFPGDYGWDT Sbjct: 30 SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85 Query: 300 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 479 AGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG+QIFSEG Sbjct: 86 AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEG 145 Query: 480 GLDYLGNPXLVHAQS 524 GLDYLGNP LVHAQS Sbjct: 146 GLDYLGNPSLVHAQS 160
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 182 bits (463), Expect = 4e-46 Identities = 87/109 (79%), Positives = 91/109 (83%), Gaps = 1/109 (0%) Frame = +3 Query: 201 WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 380 WYG DRV YLGP S PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG Sbjct: 47 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106 Query: 381 ALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPXLVHAQS 524 ALGC+FPE+L + V F E VWFKAGSQIFS+GGLDYLGNP LVHAQS Sbjct: 107 ALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQS 155 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 179 bits (454), Expect = 4e-45 Identities = 89/130 (68%), Positives = 101/130 (77%), Gaps = 1/130 (0%) Frame = +3 Query: 138 EARVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 +A T + AA AK WYG DR +LGP S + P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 318 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYL 494 PETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG+QIFSEGGLDYL Sbjct: 78 PETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYL 137 Query: 495 GNPXLVHAQS 524 G+P L+HAQ+ Sbjct: 138 GSPALIHAQN 147 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 164 bits (416), Expect = 1e-40 Identities = 77/110 (70%), Positives = 93/110 (84%), Gaps = 2/110 (1%) Frame = +3 Query: 201 WYGSDRVLYLGPLS-GDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 377 +YG DR +LGP S D P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 378 GALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPXLVHAQS 524 GALG + PELL++ GV+FGE VWFKAG+QIF++GGL+YLGN L+HAQS Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQS 142 Score = 30.4 bits (67), Expect = 3.1 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 137 bits (346), Expect = 1e-32 Identities = 72/127 (56%), Positives = 87/127 (68%), Gaps = 2/127 (1%) Frame = +3 Query: 150 TMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETF 329 T + A +K +YG D L P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 330 AKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGSQIFSEGGLDYLGNP 503 + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG+ IF +GGL+YLGNP Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNP 158 Query: 504 XLVHAQS 524 L+HAQ+ Sbjct: 159 SLIHAQN 165 Score = 32.3 bits (72), Expect = 0.81 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 422 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 102 bits (254), Expect = 6e-22 Identities = 56/128 (43%), Positives = 72/128 (56%), Gaps = 4/128 (3%) Frame = +3 Query: 126 ALFGEARVTMRKTAAKAKPVXXXXPWYGSDRVLYL--GPLS-GDPPSYLTGEFPGDYGWD 296 ALF + + K+ A ++ WYG DR ++L G L + P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 297 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFS 473 GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK G+ + Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLD 156 Query: 474 EGGLDYLG 497 L+Y G Sbjct: 157 GNTLNYFG 164
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 82.8 bits (203), Expect = 5e-16 Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Frame = +3 Query: 96 GKAVKDLPSSALFGEA-RVTMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGE 272 G V +S L G RV+ T A+ DR L+ PP +L G Sbjct: 24 GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGS 81 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFK 452 PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ Sbjct: 82 LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYT 140 Query: 453 AGSQ 464 AG Q Sbjct: 141 AGEQ 144
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 80.5 bits (197), Expect = 3e-15 Identities = 36/41 (87%), Positives = 39/41 (95%) Frame = +3 Query: 402 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPXLVHAQS 524 ELL +NGVKFGEAVWFKAG+QIFSEGGLDYLGNP L+HAQS Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQS 41
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 75.9 bits (185), Expect = 6e-14 Identities = 34/72 (47%), Positives = 44/72 (61%) Frame = +3 Query: 249 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 428 PP +L G PGD+G+D GL +DPE+ N + E++H RWAMLGA G PE L + GV Sbjct: 74 PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV- 132 Query: 429 FGEAVWFKAGSQ 464 W+ AG Q Sbjct: 133 LNTPSWYTAGEQ 144
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 73.9 bits (180), Expect = 2e-13 Identities = 34/76 (44%), Positives = 48/76 (63%) Frame = +3 Query: 240 SGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 419 + +PP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 420 GVKFGEAVWFKAGSQI 467 G+ WF+AG + Sbjct: 250 ----GKGAWFEAGDSV 261 Score = 72.4 bits (176), Expect = 7e-13 Identities = 35/73 (47%), Positives = 45/73 (61%) Frame = +3 Query: 249 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 428 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 429 FGEAVWFKAGSQI 467 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 63.9 bits (154), Expect = 3e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +3 Query: 252 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 431 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 432 GEAVWFKA 455 G+ +W++A Sbjct: 65 GKGIWYEA 72
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 68.6 bits (166), Expect = 1e-11 Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 2/91 (2%) Frame = +3 Query: 237 LSGDP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 413 + G P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 414 RNGVKFGEAVWFKAGSQIFSEGG-LDYLGNP 503 G W KA GG YLG P Sbjct: 109 ------GLGNWVKAQEWAAIPGGQATYLGQP 133
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 67.0 bits (162), Expect = 3e-11 Identities = 30/73 (41%), Positives = 45/73 (61%) Frame = +3 Query: 249 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 428 PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 168 PPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL------ 221 Query: 429 FGEAVWFKAGSQI 467 G+ WF+ G+ + Sbjct: 222 -GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +3 Query: 318 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 467 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 60.1 bits (144), Expect = 4e-09 Identities = 28/71 (39%), Positives = 40/71 (56%) Frame = +3 Query: 252 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 431 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 432 GEAVWFKAGSQ 464 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 55.8 bits (133), Expect = 7e-08 Identities = 29/70 (41%), Positives = 35/70 (50%) Frame = +3 Query: 252 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 431 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 432 GEAVWFKAGS 461 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 55.8 bits (133), Expect = 7e-08 Identities = 30/70 (42%), Positives = 38/70 (54%) Frame = +3 Query: 252 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 431 P +L G PGD+G+D GL DP RE E+IH RWAML LG + A G+ Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP- 129 Query: 432 GEAVWFKAGS 461 WF+AG+ Sbjct: 130 ----WFEAGA 135
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 54.7 bits (130), Expect = 2e-07 Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 8/92 (8%) Frame = +3 Query: 207 GSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRW 368 G++R L+ S SYL G PGD+G+D GLS DPE F + + L EVI+ R+ Sbjct: 50 GANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRF 106 Query: 369 AMLGALGCVFPELLARNGVKFGEA--VWFKAG 458 AMLGA G + PE+L + G+ E WF+ G Sbjct: 107 AMLGAAGAIAPEILGKAGLIPQETALAWFQTG 138
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 54.3 bits (129), Expect = 2e-07 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +3 Query: 252 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 431 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 432 GEAVWFKAGS 461 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 203 GKAVK PSS+ + G R+TMRKTAAK KP PW Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 43.1 bits (100), Expect = 5e-04 Identities = 53/181 (29%), Positives = 64/181 (35%), Gaps = 46/181 (25%) Frame = +3 Query: 99 KAVKDLPSSALFGEARV---TMRKTAAKAKPVXXXXPWYGSDRVLYLGPLSGDPPSYLTG 269 + V D+ S++ AR T + + KAK V SDR L+ P YL G Sbjct: 17 RVVSDISSNSSRFTARFGFGTKKASPKKAKTVI-------SDRPLWFP--GAKSPEYLDG 67 Query: 270 EFPGDYGWDTAGLSADPE-----------TFAKN-------------------------- 338 GDYG+D GL E AKN Sbjct: 68 SLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEV 127 Query: 339 ------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGN 500 RE E+IH RWAML LG + E L GV W AG +G YLG Sbjct: 128 FGLQRFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAGKVELVDGS-SYLGQ 179 Query: 501 P 503 P Sbjct: 180 P 180 Score = 32.7 bits (73), Expect = 0.62 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 389 +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 214 YPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 42.7 bits (99), Expect = 6e-04 Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +3 Query: 96 GKAVKDLPSSA-LFGEARVTMRKTAAKAKPVXXXXPW 203 GK VK PSS+ + G R+TMRKTAAK KP PW Sbjct: 15 GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 40.8 bits (94), Expect = 0.002 Identities = 39/129 (30%), Positives = 45/129 (34%), Gaps = 43/129 (33%) Frame = +3 Query: 246 DPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 338 +PP +L G GD G+D GL E AKN Sbjct: 64 NPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPT 123 Query: 339 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 476 RE E+IH RWAMLG LG + E L G+ W AG E Sbjct: 124 PFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL--TGI-----AWQDAGKVELVE 176 Query: 477 GGLDYLGNP 503 G YLG P Sbjct: 177 GS-SYLGQP 184 Score = 30.0 bits (66), Expect = 4.0 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 386 +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 218 YPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 40.4 bits (93), Expect = 0.003 Identities = 47/155 (30%), Positives = 54/155 (34%), Gaps = 44/155 (28%) Frame = +3 Query: 171 KAKPVXXXXPWYGSDRVL-YLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPE-------- 323 KA P +DR L Y G +S P +L G GDYG+D GL E Sbjct: 40 KAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDS 96 Query: 324 ---TFAKN--------------------------------RELEVIHCRWAMLGALGCVF 398 AKN RE E+IH RWAML LG + Sbjct: 97 LDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALS 156 Query: 399 PELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNP 503 E L GV W AG +G YLG P Sbjct: 157 VEWL--TGV-----TWQDAGKVELVDGS-SYLGQP 183 Score = 34.7 bits (78), Expect = 0.16 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = +3 Query: 273 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 389 +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 217 YPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 38.9 bits (89), Expect = 0.009 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%) Frame = +3 Query: 228 LGPLSGDPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 401 + P +G S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 402 ELLARN--GVKFGEAVW 446 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 36.2 bits (82), Expect = 0.056 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%) Frame = +3 Query: 252 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 338 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 339 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 440 RE E+IH RWAML LG + E A GV + EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 35.4 bits (80), Expect = 0.096 Identities = 22/51 (43%), Positives = 26/51 (50%) Frame = -3 Query: 443 DGLAELDAVAGEQLGEDAAERAEHGPPAVDHLQLPVLGKGLGVGREPRSVP 291 DG+ +L V +L E AAER HG PA H V G G G R +VP Sbjct: 70 DGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich| protein 1) Length = 254 Score = 33.1 bits (74), Expect = 0.47 Identities = 25/110 (22%), Positives = 38/110 (34%) Frame = -1 Query: 457 PALNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SP 278 P + P L L +S PS+ + SSS + S+ S A S +P Sbjct: 96 PWYSSRLEPALKSLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAAP 155 Query: 277 GNSPVK*LGGSPESGPR*STRSXPYHXXXXXXXXXXXXXLRMVTRASPKS 128 +S K +P S S+ + P +T A+P S Sbjct: 156 SSSEAKSSSAAPSSSEAKSSSAAPSSSEAKSSSAAPSSTEAKITSAAPSS 205
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 33.1 bits (74), Expect = 0.47 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -1 Query: 502 GLPR*SRPPSLKIWEPALNQTASPNL-------------TPLRASSSGKTQ-PSAPSMAH 365 G P PP+ K+ EP++ ++A +L TP+ SS +Q S P ++ Sbjct: 311 GNPNAVLPPTAKLTEPSVEKSALGSLCKTVSQIGQAQSTTPVTTPSSRPSQLASPPPASN 370 Query: 364 RQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK*LGGS 245 I+SSS A S S+ S S S +SP L G+ Sbjct: 371 ASTISSSSSTAASCSASSSSGCSSAASSLNSSPSSRLAGA 410
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +3 Query: 96 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 203 G+AVK PS S + G R+TMRK AK+ P PW Sbjct: 15 GQAVKLSPSASEISGNGRITMRKAVAKSAP--SSSPW 49
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = +3 Query: 483 LDYLGNPXLVHAQS 524 LDYLGNP LVHAQS Sbjct: 1 LDYLGNPSLVHAQS 14
>YBK4_YEAST (P38164) WD-repeat protein YBL104C| Length = 1038 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/73 (20%), Positives = 35/73 (47%) Frame = -1 Query: 505 LGLPR*SRPPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAK 326 +GL R SL+IW+ + + + P+ + + ++ S + + +S++FL + Sbjct: 165 MGLDRNKHDSSLQIWDMNYHDDSHETINPMFSYCTNESIVSLKFLNDTSVLAASTKFLKE 224 Query: 325 VSGSAESPAVSHP 287 + + +P HP Sbjct: 225 IDVRSPNPIYQHP 237
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 31.2 bits (69), Expect = 1.8 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%) Frame = -1 Query: 451 LNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGN 272 L+ +P L + + SAP+ H Q + S+S+ L ++ S+ SP+ P +P Sbjct: 1325 LSSPEAPEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLL 1384 Query: 271 SPVK*LGG----SPES-GPR 227 P LG SPE+ GPR Sbjct: 1385 YPQMALGTSSAISPETDGPR 1404
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 481 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMA 368 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 481 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMA 368 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>VIEN_NPVAC (P24647) Immediate-early regulatory protein IE-N| Length = 408 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -1 Query: 496 PR*SRPPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAHRQ 359 P SR L + +N T SP P SSS ++QPS+ S +HR+ Sbjct: 10 PSSSRRHRLSLSRRRINFTTSPEAQP---SSSSRSQPSSSSRSHRR 52
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 30.4 bits (67), Expect = 3.1 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%) Frame = +3 Query: 135 GEARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLS 311 G A +R T + V PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 312 ADPETFAKNRELEVIHCR 365 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>NFRKB_HUMAN (Q6P4R8) Nuclear factor related to kappa-B-binding protein| (DNA-binding protein R kappa-B) Length = 1299 Score = 30.4 bits (67), Expect = 3.1 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Frame = -1 Query: 478 PSLKIWEP---ALNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAE 308 P++ I P A+N++ ++ SSSG S+P+M H + S + S A Sbjct: 731 PAIPISPPPVSAVNKSGPSTVSEPAKSSSGVLLVSSPTMPHLGTMLSPASSQTAPSSQAA 790 Query: 307 SPAVSHP*SPGNSPVK 260 + VSH S G S V+ Sbjct: 791 ARVVSHSGSAGLSQVR 806
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +3 Query: 141 ARVTMRKTAAKA-KPVXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 A +R T K + V PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +3 Query: 96 GKAVKDLPS-SALFGEARVTMRKTAAKAKPVXXXXPW 203 G+AVK PS S G R+TMRK AK+ P PW Sbjct: 15 GQAVKLSPSASENSGNGRITMRKAVAKSAP--SSSPW 49
>DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)| Length = 804 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = +1 Query: 202 GTXPTACSTSARSPATPRAT*PVSFP-VTTDGTLRGSLPTPRP---LPRTGSWR*ST 360 G+ P + + P TP+AT +S P + TDG +P P P P GS R ST Sbjct: 713 GSSPPQSTPLSPPPLTPKATRTLSSPSLQTDGIAATPVPPPPPPKSKPYEGSQRNST 769
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +3 Query: 321 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG-----GL 485 ET +K R+++ I C ++ +L +F E++ NG F + +G + F+ GL Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFARRFALTFGL 961 Query: 486 DYL 494 D L Sbjct: 962 DQL 964
>SHC1_HUMAN (P29353) SHC transforming protein 1 (SH2 domain protein C1) (Src| homology 2 domain-containing transforming protein C1) Length = 583 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = +1 Query: 202 GTXPTACSTSARSPATPR---AT*PVSFPVTTDGTLRGSLPTPRPLP 333 G P A +A + TP AT PV PV D +R +P P P P Sbjct: 371 GAAPGAARPTAPNAQTPSHLGATLPVGQPVGGDPEVRKQMPPPPPCP 417
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 29.6 bits (65), Expect = 5.3 Identities = 23/69 (33%), Positives = 34/69 (49%) Frame = -1 Query: 451 LNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGN 272 + Q A+P +T SSS + S P ++ I+S+S +A S S+ S S S + Sbjct: 306 IGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSS-VATSSSSSSSGCSSAASSLNS 364 Query: 271 SPVK*LGGS 245 SP LG S Sbjct: 365 SPSSRLGAS 373
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 29.6 bits (65), Expect = 5.3 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%) Frame = +3 Query: 183 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 359 V PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 360 --CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 446 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>FA53C_PONPY (Q5R815) Protein FAM53C| Length = 392 Score = 29.6 bits (65), Expect = 5.3 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -1 Query: 487 SRPPSLKIWEPALNQTASPNLTPLR-ASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSA 311 S P L W+P S TP++ S G P P + + + SS RFL S S+ Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRV-SSLRFLQAPSASS 180 Query: 310 ESPAVSHP*SP 278 + P SP Sbjct: 181 QCAPAHRPYSP 191
>FA53C_HUMAN (Q9NYF3) Protein FAM53C| Length = 392 Score = 29.6 bits (65), Expect = 5.3 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = -1 Query: 487 SRPPSLKIWEPALNQTASPNLTPLR-ASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSA 311 S P L W+P S TP++ S G P P + + + SS RFL S S+ Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRV-SSLRFLQAPSASS 180 Query: 310 ESPAVSHP*SP 278 + P SP Sbjct: 181 QCAPAHRPYSP 191
>BSND_MOUSE (Q8VIM4) Barttin| Length = 307 Score = 29.6 bits (65), Expect = 5.3 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 4/99 (4%) Frame = -1 Query: 484 RPPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAK---VSGS 314 +PP +++WE A + P+ T ++ G ++ P +A +SS + Sbjct: 92 QPPYVRLWEEAAYDQSLPDFTHIQMKVMGYSEDPRPLLAPELKTGASSVREGEPRTAQAW 151 Query: 313 AESPAVSHP*SPGNSPVK*LG-GSPESGPR*STRSXPYH 200 E+P V H S N K SP GP+ S +H Sbjct: 152 MEAPVVVHRGSDENEGEKSHSQSSPSVGPQGSAPLASFH 190
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 6.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +3 Query: 321 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 431 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%) Frame = -1 Query: 454 ALNQTASPNLTP----LRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP 287 A++ T +P +TP + +S PSAP+M+ + +S+S + S PAVS Sbjct: 399 AMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ- 457 Query: 286 *SPGNSPVK*LGGSPESGPR 227 G S LG S ES R Sbjct: 458 -GFGQSTTTTLGPSFESNER 476
>NOTC3_MOUSE (Q61982) Neurogenic locus notch homolog protein 3 precursor (Notch 3)| [Contains: Notch 3 extracellular truncation; Notch 3 intracellular domain] Length = 2318 Score = 29.3 bits (64), Expect = 6.9 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%) Frame = -1 Query: 433 PNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVK-- 260 P LTP S PS PS++ T S + S PA HP S + P Sbjct: 2243 PYLTPSPESPEHWASPSPPSLSDWSDSTPSPATATNATASGALPAQPHPISVPSLPQSQT 2302 Query: 259 *LGGSPESGPR 227 LG PE P+ Sbjct: 2303 QLGPQPEVTPK 2313
>DIG1_CAEEL (Q09165) Mesocentin precursor| Length = 13100 Score = 29.3 bits (64), Expect = 6.9 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = -3 Query: 413 GEQLGEDAAERAEHGPPAVDHLQLPVLGKGLGVGREPRSVPSVVTGKLTGQ 261 G+ L DA+ + H D QLP G +G + VP+ V+G+ Q Sbjct: 11506 GQVLPTDASGKTVHSVYGPDGTQLPTDASGSAIGPDGELVPTDVSGRPLSQ 11556
>MEN1_HUMAN (O00255) Menin| Length = 615 Score = 28.9 bits (63), Expect = 9.0 Identities = 23/64 (35%), Positives = 26/64 (40%), Gaps = 11/64 (17%) Frame = -3 Query: 422 AVAGEQLGEDAAE------RAEHGPPAVDHLQLPVLGKGLGVGR-----EPRSVPSVVTG 276 A A E GE+A E R E P + P L KGLG G+ PR P V G Sbjct: 470 AEAEEPWGEEAREGRRRGPRRESKPEEPPPPKKPALDKGLGTGQGAVSGPPRKPPGTVAG 529 Query: 275 KLTG 264 G Sbjct: 530 TARG 533
>DLX3_MOUSE (Q64205) Homeobox protein DLX-3| Length = 287 Score = 28.9 bits (63), Expect = 9.0 Identities = 17/72 (23%), Positives = 26/72 (36%) Frame = -1 Query: 481 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFLAKVSGSAESP 302 PPS +W+ + + T +P PL P+ W + + + P Sbjct: 210 PPSPALWDTSSHSTPAPARNPLPPPLPYSASPNYLDDPTNSWYHTQNLSGPHLQQQPPQP 269 Query: 301 AVSHP*SPGNSP 266 A H SPG P Sbjct: 270 ATLHHASPGPPP 281
>NFRKB_MOUSE (Q6PIJ4) Nuclear factor related to kappa-B-binding protein| (DNA-binding protein R kappa-B) Length = 1296 Score = 28.9 bits (63), Expect = 9.0 Identities = 24/84 (28%), Positives = 36/84 (42%) Frame = -1 Query: 511 TXLGLPR*SRPPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAHRQWITSSSRFL 332 T LP PP + A+N++ S ++ SSSG S+P+M + S + Sbjct: 724 TTPALPTPISPPPVS----AVNRSGSSTVSEPAQSSSGVLLVSSPTMPQLGTMLSPASIQ 779 Query: 331 AKVSGSAESPAVSHP*SPGNSPVK 260 S A + VSH S G V+ Sbjct: 780 TPPSSQATARVVSHSSSAGLPQVR 803
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +1 Query: 217 ACSTSARSPATPRAT*PVSFPVTTDGTLRGSLPT---PRPLPRTGS 345 A STS SP P AT P + GTL G PT P LP+ S Sbjct: 1856 ARSTSTSSPVRPAATFPPATHCPLGGTLEGVYPTLMEPVLLPKETS 1901
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = +3 Query: 141 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 A +R T + V PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 318 PETFAKNRELEVIHCR 365 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 9.0 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%) Frame = +3 Query: 183 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 359 V PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 360 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 446 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = +3 Query: 141 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 A +R T + V PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167 Query: 318 PETFAKNRELEVIHCR 365 A R++ H R Sbjct: 168 K---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 9.0 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = +3 Query: 141 ARVTMRKTAAKAKP-VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSAD 317 A +R T + V PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 318 PETFAKNRELEVIHCR 365 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 28.9 bits (63), Expect = 9.0 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 11/99 (11%) Frame = +3 Query: 183 VXXXXPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 359 V PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 360 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 446 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,034,997 Number of Sequences: 219361 Number of extensions: 1040584 Number of successful extensions: 4564 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 4172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4516 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
