>NORM_MANSM (Q65SY9) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 465

 Score = 32.7 bits (73), Expect = 0.78
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +1

Query: 439 LILLALPAVLGQAIDPMAQLMETAYIGKLGALELASAGIGVAIF 570
           LILL+LP +L Q       L++T   G++ A ++A+  +G +I+
Sbjct: 17  LILLSLPILLAQIAQNSMGLVDTIMAGRVSAADMAAISVGASIW 60

>PYR1_SQUAC (Q91437) CAD protein [Includes: Glutamine-dependent|
            carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate
            carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC
            3.5.2.3)]
          Length = 2242

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = +1

Query: 406  SRLYP---GTVGIDLILLALPAVLGQAIDPMAQLMETAYIG 519
            SR +P    T+G+D+I LA   ++G+ ++P+  +  T  +G
Sbjct: 1225 SRSFPFVSKTLGVDMIALATKVIMGEEVEPVGLMTGTGVVG 1265

>NORM_PSESM (Q88BA2) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 460

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 439 LILLALPAVLGQAIDPMAQLMETAYIGKLGALELASAGIGVAIFNILS 582
           ++ LA P +  Q    +    +T  +GK+G   LA  G+G A ++ +S
Sbjct: 12  ILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFIS 59

>NORM_DEIRA (Q9RY44) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 451

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +1

Query: 439 LILLALPAVLGQAIDPMAQLMETAYIGKLGALELASAGIGVAIFNIL 579
           L+ LA P V+ Q       L+ TA IG+LG  ELA+A    A + ++
Sbjct: 18  LLRLAGPVVVSQFAANALALIATAVIGRLGERELAAAAYANAAYYLV 64

>NORM_SYNP6 (Q5MZD9) Probable multidrug resistance protein norM|
           (Multidrug-efflux transporter)
          Length = 464

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 448 LALPAVLGQAIDPMAQLMETAYIGKLGALELASAGIGVAIFNIL 579
           LA+P    Q        ++T  +G+LG   LA+ G+  A+F  +
Sbjct: 16  LAIPLAAAQVAQAAVGFVDTVMMGRLGPEPLAAGGLASALFQFI 59

>PYR1_HUMAN (P27708) CAD protein [Includes: Glutamine-dependent|
            carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate
            carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC
            3.5.2.3)]
          Length = 2225

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = +1

Query: 406  SRLYP---GTVGIDLILLALPAVLGQAIDPMAQLMETAYIG 519
            SR +P    T+G+DL+ LA   ++G+ ++P+  +  +  +G
Sbjct: 1220 SRSFPFVSKTLGVDLVALATRVIMGEEVEPVGLMTGSGVVG 1260


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,607,406
Number of Sequences: 219361
Number of extensions: 1041694
Number of successful extensions: 3493
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3491
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)