ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63k16 |
|---|---|
| Clone Library Name | barley_pub |
>ERG1_PANGI (O48651) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 539 Score = 343 bits (880), Expect = 2e-94 Identities = 159/191 (83%), Positives = 182/191 (95%) Frame = +2 Query: 14 EELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSP 193 +EL A+APLTIVCDGCFSNLRR+LC+PKVEVPSCFVGL+LEN LPH NHGHVILA+PSP Sbjct: 220 QELSAFAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLILENIDLPHINHGHVILADPSP 279 Query: 194 ILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIR 373 ILFY ISSTE+RCLVDVPGQKVP I++GE+ANYLKTVVAPQ+P ++Y+SFIAA+DKG+IR Sbjct: 280 ILFYKISSTEIRCLVDVPGQKVPCISNGELANYLKTVVAPQVPKQLYNSFIAAVDKGNIR 339 Query: 374 TMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDASA 553 TMPNRSMPA PHPTPGALL+GDAFNMRHPLTGGGMTVALSDIV++R+LL+PLR+LHD+S Sbjct: 340 TMPNRSMPADPHPTPGALLLGDAFNMRHPLTGGGMTVALSDIVLIRDLLRPLRDLHDSST 399 Query: 554 LCKYLESFYTL 586 LCKYLESFYTL Sbjct: 400 LCKYLESFYTL 410
>ERG11_BRANA (O65727) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 506 Score = 189 bits (481), Expect = 4e-48 Identities = 94/192 (48%), Positives = 132/192 (68%), Gaps = 1/192 (0%) Frame = +2 Query: 14 EELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSP 193 EE A+APLT+VCDGC+SNLRR++ EV S VG V +NCQL +I++ PS Sbjct: 194 EETTAFAPLTVVCDGCYSNLRRSVNDNNAEVISYQVGYVSKNCQLEDPEKLKLIMSKPSF 253 Query: 194 ILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGS-I 370 + Y ISST+VRC++++ +PSI++GEMA YLK +APQ+PPE+ F+ ID+G+ I Sbjct: 254 TMLYQISSTDVRCVMEIFPGNIPSISNGEMAVYLKNTMAPQVPPELRKIFLKGIDEGAQI 313 Query: 371 RTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDAS 550 + MP + M A G +++GDAFNMRHP GM V LSDI++LR LL+PLRNL DA+ Sbjct: 314 KAMPTKRMEATLSEKQGVIVLGDAFNMRHPAIASGMMVVLSDILILRRLLQPLRNLSDAN 373 Query: 551 ALCKYLESFYTL 586 + + ++SFY + Sbjct: 374 KVSEVIKSFYVI 385
>ERG11_ARATH (O65404) Squalene monooxygenase 1,1 (EC 1.14.99.7) (Squalene| epoxidase 1,1) (SE 1,1) Length = 516 Score = 180 bits (456), Expect = 3e-45 Identities = 90/192 (46%), Positives = 126/192 (65%), Gaps = 1/192 (0%) Frame = +2 Query: 14 EELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSP 193 EE A APLT+VCDGC+SNLRR+L EV S VG + +NCQL +I++ PS Sbjct: 193 EETTALAPLTVVCDGCYSNLRRSLNDNNAEVLSYQVGFISKNCQLEEPEKLKLIMSKPSF 252 Query: 194 ILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGS-I 370 + Y ISST+VRC+ +V +PSI++GEMA ++K +APQ+P ++ F+ ID+G I Sbjct: 253 TMLYQISSTDVRCVFEVLPNNIPSISNGEMATFVKNTIAPQVPLKLRKIFLKGIDEGEHI 312 Query: 371 RTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDAS 550 + MP + M A G +L+GDAFNMRHP GM V LSDI++LR LL+PL NL +A Sbjct: 313 KAMPTKKMTATLSEKKGVILLGDAFNMRHPAIASGMMVLLSDILILRRLLQPLSNLGNAQ 372 Query: 551 ALCKYLESFYTL 586 + + ++SFY + Sbjct: 373 KISQVIKSFYDI 384
>ERG12_ARATH (O65402) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 517 Score = 177 bits (448), Expect = 3e-44 Identities = 88/193 (45%), Positives = 128/193 (66%), Gaps = 2/193 (1%) Frame = +2 Query: 14 EELKAYAPLTIVCDGCFSNLRRALCSPK-VEVPSCFVGLVLENCQLPHANHGHVILANPS 190 EE A APLT+VCDGC+SNLRR+L E+ S VG + +NC+L H+IL+ PS Sbjct: 193 EETTALAPLTVVCDGCYSNLRRSLNDDNNAEIMSYIVGYISKNCRLEEPEKLHLILSKPS 252 Query: 191 PILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGS- 367 + Y ISST+VRC +V + PSIA+GEM+ ++K + PQ+PP++ F+ ID+G+ Sbjct: 253 FTMVYQISSTDVRCGFEVLPENFPSIANGEMSTFMKNTIVPQVPPKLRKIFLKGIDEGAH 312 Query: 368 IRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDA 547 I+ +P + M + G +++GDAFNMRHP+ GM V LSDI++LR LL+PL NL DA Sbjct: 313 IKVVPAKRMTSTLSKKKGVIVLGDAFNMRHPVVASGMMVLLSDILILRRLLQPLSNLGDA 372 Query: 548 SALCKYLESFYTL 586 + + + + SFY + Sbjct: 373 NKVSEVINSFYDI 385
>ERG13_ARATH (O65403) Squalene monooxygenase 2 (EC 1.14.99.7) (Squalene| epoxidase 2) (SE 2) Length = 516 Score = 171 bits (432), Expect = 2e-42 Identities = 88/195 (45%), Positives = 127/195 (65%), Gaps = 4/195 (2%) Frame = +2 Query: 14 EELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSP 193 EE+ A+APLT+VCDGC+SNLRR+L EV S VG V +N +L + H+I + P Sbjct: 190 EEITAFAPLTVVCDGCYSNLRRSLVDNTEEVLSYMVGYVTKNSRLEDPHSLHLIFSKPLV 249 Query: 194 ILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPP--EIYDSFIAAIDKG- 364 + Y I+S EVRC+ +VP +PSI++GEM+ +LK +APQIP + + F+ I++G Sbjct: 250 CVIYQITSDEVRCVAEVPADSIPSISNGEMSTFLKKSMAPQIPETGNLREIFLKGIEEGL 309 Query: 365 -SIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLH 541 I++ +SM + G +++GDAFNMRHP+ GM VALSDI +LRNLLKPL NL Sbjct: 310 PEIKSTATKSMSSRLCDKRGVIVLGDAFNMRHPIIASGMMVALSDICILRNLLKPLPNLS 369 Query: 542 DASALCKYLESFYTL 586 + + ++SFY + Sbjct: 370 NTKKVSDLVKSFYII 384
>ERG12_BRANA (O65726) Squalene monooxygenase 1,2 (EC 1.14.99.7) (Squalene| epoxidase 1,2) (SE 1,2) Length = 518 Score = 170 bits (431), Expect = 2e-42 Identities = 81/192 (42%), Positives = 128/192 (66%), Gaps = 1/192 (0%) Frame = +2 Query: 14 EELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSP 193 EE ++APLT+VCDGC SNLRR+L EV + +G + NC+L + H+I+A PS Sbjct: 195 EETTSFAPLTVVCDGCHSNLRRSLNDNNAEVTAYEIGYISRNCRLEQPDKLHLIMAKPSF 254 Query: 194 ILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGS-I 370 + Y +SST+VRC ++ + +PS+++GEM ++++ +APQ+P ++ +F+ +D+GS I Sbjct: 255 AMLYQVSSTDVRCNFELLSKNLPSVSNGEMTSFVRNSIAPQVPLKLRKTFLKGLDEGSHI 314 Query: 371 RTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDAS 550 + + +PA G +++GDAFNMRHP+ GM V LSDI++L LLKPL NL D + Sbjct: 315 KITQAKRIPATLSRKKGVIVLGDAFNMRHPVIASGMMVLLSDILILSRLLKPLGNLGDEN 374 Query: 551 ALCKYLESFYTL 586 + + ++SFY L Sbjct: 375 KVSEVMKSFYAL 386
>ERG1_HUMAN (Q14534) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 574 Score = 158 bits (400), Expect = 1e-38 Identities = 84/184 (45%), Positives = 117/184 (63%) Frame = +2 Query: 29 YAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYP 208 +APLT+V DG FS R++L S KV V S FVG +++N ANH +ILANPSP+L Y Sbjct: 277 HAPLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLIYR 336 Query: 209 ISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNR 388 ISS+E R LVD+ G+ ++ Y+ + PQIP + + F+ A D +R+M Sbjct: 337 ISSSETRVLVDIRGEMPRNLRE-----YMVEKIYPQIPDHLKEPFLEATDNSHLRSMLAS 391 Query: 389 SMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDASALCKYL 568 +P + G LL+GDA+NMRHPLTGGGMTVA DI + R LLK + +L+D +A+ + Sbjct: 392 FLPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAN 451 Query: 569 ESFY 580 +SFY Sbjct: 452 KSFY 455
>ERG1_MOUSE (P52019) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 572 Score = 155 bits (393), Expect = 6e-38 Identities = 80/191 (41%), Positives = 119/191 (62%) Frame = +2 Query: 8 TREELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANP 187 T + + +APLT+V DG FS R++L S KV V S FVG ++++ N ++L NP Sbjct: 268 TGDTKELHAPLTVVADGLFSKFRKSLISSKVSVSSHFVGFLMKDAPQFKPNFAELVLVNP 327 Query: 188 SPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGS 367 SP+L Y ISS+E R LVD+ G+ + Y+ + PQ+P + +SF+ A G Sbjct: 328 SPVLIYQISSSETRVLVDIRGE-----LPRNLREYMAEQIYPQLPEHLKESFLEASQNGR 382 Query: 368 IRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDA 547 +RTMP +P + G L++GDA+N+RHPLTGGGMTVAL DI + R LLK + +L+D Sbjct: 383 LRTMPASFLPPSSVNKRGVLILGDAYNLRHPLTGGGMTVALKDIKLWRQLLKDIPDLYDD 442 Query: 548 SALCKYLESFY 580 +A+ + +SF+ Sbjct: 443 AAIFQAKKSFF 453
>ERG1_RAT (P52020) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 573 Score = 153 bits (387), Expect = 3e-37 Identities = 80/191 (41%), Positives = 117/191 (61%) Frame = +2 Query: 8 TREELKAYAPLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANP 187 T + + +APLT+V DG FS R+ L S KV V S FVG ++++ AN ++L +P Sbjct: 269 TGDTKELHAPLTVVADGLFSKFRKNLISNKVSVSSHFVGFIMKDAPQFKANFAELVLVDP 328 Query: 188 SPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGS 367 SP+L Y IS +E R LVD+ G+ + Y+ + PQIP + +SF+ A Sbjct: 329 SPVLIYQISPSETRVLVDIRGE-----LPRNLREYMTEQIYPQIPDHLKESFLEACQNAR 383 Query: 368 IRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDA 547 +RTMP +P + G LL+GDA+N+RHPLTGGGMTVAL DI + R LLK + +L+D Sbjct: 384 LRTMPASFLPPSSVNKRGVLLLGDAYNLRHPLTGGGMTVALKDIKIWRQLLKDIPDLYDD 443 Query: 548 SALCKYLESFY 580 +A+ + +SF+ Sbjct: 444 AAIFQAKKSFF 454
>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene| epoxidase) (SE) Length = 457 Score = 142 bits (359), Expect = 5e-34 Identities = 73/185 (39%), Positives = 109/185 (58%), Gaps = 2/185 (1%) Frame = +2 Query: 32 APLTIVCDGCFSNLRRALCSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYPI 211 APLTIVCDGCFS R+A ++V F+GL+L N GHVIL+ +P++ YPI Sbjct: 160 APLTIVCDGCFSKFRKAFIDHPIQVTDHFLGLILTNPDYIAPGRGHVILSKVAPMVLYPI 219 Query: 212 SSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRS 391 SSTE R L++ PG+ +P + + + Y+ P +P ++ S AA+ +R+MPN+ Sbjct: 220 SSTEARILINYPGKNLPPMET--LKKYVLESCVPNMPEKLRPSLKAAVYNDRLRSMPNQF 277 Query: 392 MPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKP--LRNLHDASALCKY 565 +P + T G +L+GD+ NMRHPLTGGGMTV D +L + P + +L D + Sbjct: 278 LPPTVNRTKGMILVGDSNNMRHPLTGGGMTVCFHDAYLLSRFISPSAVPDLLDYERILNQ 337 Query: 566 LESFY 580 + F+ Sbjct: 338 MNKFH 342
>ERG1_CANAL (Q92206) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 134 bits (338), Expect = 1e-31 Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 6/190 (3%) Frame = +2 Query: 29 YAPLTIVCDGCFSNLRRALCSPKVE-VPSCFVGLVLENCQLPHANHGHVILANPSPILFY 205 +A LTI CDG +S R+ L V + S F+GL L+N +LP GHV+L +P L Y Sbjct: 192 HAKLTISCDGIYSKFRKELSPTNVPTIGSYFIGLYLKNAELPAKGKGHVLLGGHAPALIY 251 Query: 206 PISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPN 385 +S TE R L K PS A+ + YL+ + P IP E +F A+++ R MPN Sbjct: 252 SVSPTETRVLCVYVSSKPPSAANDAVYKYLRDNILPAIPKETVPAFKEALEERKFRIMPN 311 Query: 386 RSMPAAPHPT---PGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKP--LRNLHDAS 550 + + A + G +L+GD+ NMRHPLTGGGMTV L+D V+L LL P + + D Sbjct: 312 QYLSAMKQGSENHKGFILLGDSLNMRHPLTGGGMTVGLNDSVLLAKLLHPKFVEDFDDHQ 371 Query: 551 ALCKYLESFY 580 + K L++F+ Sbjct: 372 LIAKRLKTFH 381
>ERG1_ASHGO (Q75F69) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 497 Score = 123 bits (309), Expect = 3e-28 Identities = 71/161 (44%), Positives = 95/161 (59%), Gaps = 2/161 (1%) Frame = +2 Query: 32 APLTIVCDGCFSNLRRALCSPKV-EVPSCFVGLVLENCQLPHANHGHVILANPS-PILFY 205 A +T VCDG FS R+ L + +V S FVGL L + LP +HGHVIL + P++ Y Sbjct: 203 AHMTFVCDGIFSRFRKELSTTNTSKVWSSFVGLSLHHADLPTKHHGHVILGSEHMPVIAY 262 Query: 206 PISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPN 385 ISSTE R L +P + +L+ V P IPP + SF AA++ S + MPN Sbjct: 263 QISSTETRILCAYNYPTLPK----NVPEWLQKEVQPFIPPSLRKSFDAALESKSYKCMPN 318 Query: 386 RSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 508 +PA+ + G ++GDA NMRHPLTGGGM V L D+V+L Sbjct: 319 SWLPASQNNVTGLCVVGDALNMRHPLTGGGMAVGLMDVVLL 359
>ERG1_CANGA (O13306) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 489 Score = 122 bits (306), Expect = 8e-28 Identities = 73/169 (43%), Positives = 97/169 (57%), Gaps = 2/169 (1%) Frame = +2 Query: 8 TREELKAYAPLTIVCDGCFSNLRRALCSPKVE-VPSCFVGLVLENCQLPHANHGHVILAN 184 +R ++ A LT VCDG FS RR L V V S FVG+ L + +PH HGHVIL + Sbjct: 187 SRGKVDFKAHLTFVCDGIFSRFRRELHPDHVPTVNSSFVGMSLYHAHMPHDMHGHVILGD 246 Query: 185 PS-PILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDK 361 PIL Y IS E R L KVP+ ++ +++ V P IP + SF A+ + Sbjct: 247 KHMPILVYQISPEETRILCAYNAPKVPT----DLKSWMTKDVQPYIPKTLRPSFDDALAQ 302 Query: 362 GSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 508 G + M N +PA + G ++GDA NMRHPLTGGGMTV L+D+V+L Sbjct: 303 GKFKPMANSWLPARQNDVTGLCVIGDALNMRHPLTGGGMTVGLNDVVLL 351
>ERG1_YEAST (P32476) Squalene monooxygenase (EC 1.14.99.7) (Squalene epoxidase)| (SE) Length = 496 Score = 122 bits (305), Expect = 1e-27 Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 2/168 (1%) Frame = +2 Query: 11 REELKAYAPLTIVCDGCFSNLRRALCSPKVE-VPSCFVGLVLENCQLPHANHGHVILANP 187 R +++ A LT +CDG FS R+ L V V S FVG+ L N + P HGHVIL + Sbjct: 195 RGKVEFKAHLTFICDGIFSRFRKELHPDHVPTVGSSFVGMSLFNAKNPAPMHGHVILGSD 254 Query: 188 S-PILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKG 364 PIL Y IS E R L KVP+ ++ +++ V P IP + SF A+ +G Sbjct: 255 HMPILVYQISPEETRILCAYNSPKVPA----DIKSWMIKDVQPFIPKSLRPSFDEAVSQG 310 Query: 365 SIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 508 R MPN +PA + G ++GDA NMRHPLTGGGMTV L D+V+L Sbjct: 311 KFRAMPNSYLPARQNDVTGMCVIGDALNMRHPLTGGGMTVGLHDVVLL 358
>COQ6_HUMAN (Q9Y2Z9) Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-)| Length = 468 Score = 36.6 bits (83), Expect = 0.055 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%) Frame = +2 Query: 272 SGEMANYLKTVVAP------QIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLM 433 +G M Y +++ P Q+PP + A +D S P AA + P L+ Sbjct: 310 AGAMLQYAVSLLKPTKVSARQLPPSV-----ARVDAKSRVLFPLGLGHAAEYVRPRVALI 364 Query: 434 GDAFNMRHPLTGGGMTVALSDIVVLRNLL 520 GDA + HPL G G+ + DI L + L Sbjct: 365 GDAAHRVHPLAGQGVNMGFGDISSLAHHL 393
>COQ6_MOUSE (Q8R1S0) Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-)| Length = 469 Score = 36.6 bits (83), Expect = 0.055 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +2 Query: 302 VVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMT 481 V A Q+PP I A +D S P AA + P L+GDA + HPL G G+ Sbjct: 327 VSARQLPPSI-----AKVDAKSRALFPLGLGHAAEYVRPRVALIGDAAHRIHPLAGQGVN 381 Query: 482 VALSDI 499 + DI Sbjct: 382 MGFGDI 387
>COQ6_DROME (Q9VMQ5) Putative ubiquinone biosynthesis monooxgenase COQ6 (EC| 1.14.13.-) Length = 477 Score = 35.8 bits (81), Expect = 0.094 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +2 Query: 314 QIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALS 493 Q PP + +DK S T P + A+ + GA L+GDA + HPL G G+ + S Sbjct: 338 QYPPRV----CGVLDK-SRATFPLGFLHASSYVCNGAALVGDAAHRVHPLAGQGVNLGFS 392 Query: 494 DI 499 D+ Sbjct: 393 DV 394
>PHHY_PSEAE (P20586) P-hydroxybenzoate hydroxylase (EC 1.14.13.2)| (4-hydroxybenzoate 3-monooxygenase) (PHBH) Length = 394 Score = 34.7 bits (78), Expect = 0.21 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 15/185 (8%) Frame = +2 Query: 50 CDGCFSNLRRALCSPKVEV-----PSCFVGLVLENCQLPHANHGHVILANPSPI-LFYPI 211 CDG R+++ + +++V P ++GL+ + P +H + +P L Sbjct: 158 CDGFHGISRQSIPAERLKVFERVYPFGWLGLLADT---PPVSHELIYANHPRGFALCSQR 214 Query: 212 SSTEVRCLVDVP-GQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIA--AIDKGSIRTMP 382 S+T R V VP +KV + LK ++P E+ + + +++K P Sbjct: 215 SATRSRYYVQVPLSEKVEDWSDERFWTELKA----RLPSEVAEKLVTGPSLEKS---IAP 267 Query: 383 NRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL-RNLLKPLRN-----LHD 544 RS P L GDA ++ P G+ +A SD+ L R LLK R L Sbjct: 268 LRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLER 327 Query: 545 ASALC 559 SA+C Sbjct: 328 YSAIC 332
>PLAL2_HUMAN (Q9UPG8) Zinc finger protein PLAGL2 (Pleiomorphic adenoma-like| protein 2) Length = 496 Score = 33.9 bits (76), Expect = 0.36 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 1/106 (0%) Frame = +2 Query: 146 LPHANHGHVILANPSPI-LFYPISSTEVRCLVDVPGQKVPSIASGEMANYLKTVVAPQIP 322 +P H ++ N P+ + YP+ S+ + P Q P G +YL ++P Sbjct: 305 MPSTGVPHSLVHNTLPMGMSYPLESSPISS----PAQLPPKYQLGS-TSYLPD----KLP 355 Query: 323 PEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHP 460 DSF+A + GS+ PA+P P A L+ +A + P Sbjct: 356 KVEVDSFLAELP-GSLSLSSAEPQPASPQPAAAAALLDEALLAKSP 400
>COQ6_SCHPO (Q9Y7Z9) Probable ubiquinone biosynthesis monooxgenase coq6 (EC| 1.14.13.-) Length = 466 Score = 33.9 bits (76), Expect = 0.36 Identities = 22/69 (31%), Positives = 30/69 (43%) Frame = +2 Query: 314 QIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALS 493 Q+PP I + I GS P R + G L GDA + HPL G G+ + Sbjct: 326 QVPPVITE-----IVSGSRAAFPLRLAHVDEYVKEGIALCGDAAHNTHPLAGQGLNTGIQ 380 Query: 494 DIVVLRNLL 520 D+ L + L Sbjct: 381 DVESLISAL 389
>UBIF_ECOLI (P75728) 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol| hydroxylase (EC 1.14.13.-) Length = 391 Score = 33.9 bits (76), Expect = 0.36 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +2 Query: 398 AAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDASALCKYLESF 577 A + PG L+GDA + HPL G G+ + D+ L ++L R+ +A A L+ + Sbjct: 275 ALQYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY 334
>PHHY_PSEFL (P00438) P-hydroxybenzoate hydroxylase (EC 1.14.13.2)| (4-hydroxybenzoate 3-monooxygenase) Length = 394 Score = 33.9 bits (76), Expect = 0.36 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 15/185 (8%) Frame = +2 Query: 50 CDGCFSNLRRALCSPKVEV-----PSCFVGLVLENCQLPHANHGHVILANPSPI-LFYPI 211 CDG R+++ + +++V P ++GL+ + P +H + +P L Sbjct: 158 CDGFHGISRQSIPAERLKVFERVYPFGWLGLLADT---PPVSHELIYANHPRGFALCSQR 214 Query: 212 SSTEVRCLVDVP-GQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIA--AIDKGSIRTMP 382 S+T R V VP +KV + LK ++P E+ + + +++K P Sbjct: 215 SATRSRYYVQVPLTEKVEDWSDERFWTELKA----RLPAEVAEKLVTGPSLEKS---IAP 267 Query: 383 NRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL-RNLLKPLRN-----LHD 544 RS P L GDA ++ P G+ +A SD+ L R LLK R L Sbjct: 268 LRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLER 327 Query: 545 ASALC 559 SA+C Sbjct: 328 YSAIC 332
>BNA4_YEAST (P38169) Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine| 3-hydroxylase) (Biosynthesis of nicotinic acid protein 4) Length = 460 Score = 32.7 bits (73), Expect = 0.80 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Frame = +2 Query: 374 TMPNRSMPAA---PHPTPG--ALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLK 523 T P S+ P+ PG A+L+GDA + P G GM D+ +L LLK Sbjct: 288 TYPKESLVCVNCKPYDVPGGKAILLGDAAHAMVPFYGQGMNCGFEDVRILMALLK 342
>RNPA_XANCP (Q8P337) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 148 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = +2 Query: 227 RCLVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNR--SMPA 400 R L D +P +A G+ ++ A P+I D+F+ + + +P +MP Sbjct: 70 RVLRDAMRHLLPELAGGDYVIVARSAAAKATNPQIRDAFVRLLRRAGALPLPAAPGTMPP 129 Query: 401 APHPTPGAL 427 A P P +L Sbjct: 130 ARAPRPSSL 138
>BDBC_PSERE (Q8GHM3) Probable disulfide formation protein (Disulfide| oxidoreductase) (Thiol-disulfide oxidoreductase) Length = 144 Score = 31.2 bits (69), Expect = 2.3 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = -1 Query: 486 ATVIPPPVKGCRILKASPIKSAPGVGCGAAGMLLFGIVLMLPLSMAA 346 A +IP P++ C +A G C AGM LFG+V + L++ A Sbjct: 90 AGLIPQPIQPC---------TATGPSCSGAGMTLFGVVPLPALALFA 127
>COQ6_CAEEL (O01884) Probable ubiquinone biosynthesis monooxgenase coq-6 (EC| 1.14.13.-) Length = 451 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 413 TPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL 520 T L+GDA + HPL G G+ + SD+ +L +L Sbjct: 339 TTRCALIGDAAHRMHPLAGQGVNLGWSDVQILDKVL 374
>COQ6_YEAST (P53318) Ubiquinone biosynthesis monooxgenase COQ6 (EC 1.14.13.-)| Length = 479 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +2 Query: 326 EIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDI 499 EIY + +I + P + A + T L+GDA + HPL G G+ + +D+ Sbjct: 337 EIYPPRVVSIIDKTRARFPLKLTHADRYCTDRVALVGDAAHTTHPLAGQGLNMGQTDV 394
>KMO_XENTR (Q6DIZ8) Kynurenine 3-monooxygenase (EC 1.14.13.9) (Kynurenine| 3-hydroxylase) Length = 473 Score = 30.4 bits (67), Expect = 4.0 Identities = 42/194 (21%), Positives = 74/194 (38%), Gaps = 19/194 (9%) Frame = +2 Query: 32 APLTIVCDGCFSNLRRALCSPK------VEVPSCFVGLVLENCQLPHA---NHGHVILAN 184 A L + CDG FS +R+ V +P + L + + A N+ H+ N Sbjct: 160 ADLIVGCDGAFSVVRKQFMRKSRFNYSHVYIPHGYKELTIPPRKGEFAMEPNYLHIWPRN 219 Query: 185 PSPILFYPISSTEVRCLVDVPGQKVPSIASG-EMANYLKTVVAPQI----PPEIYDSFIA 349 ++ P C + +P + + +G ++ ++ KT I ++ + F Sbjct: 220 TFMMIALPNLDKSFTCTLFMPFEDFEKLTTGDQVLDFFKTYFPDSIELIGEKKLTEDFFL 279 Query: 350 AIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPL 529 + I S H ++MGDA + P G GM D +V L++ Sbjct: 280 LPPQAMISV--KCSSFCIDHK---CVIMGDAAHAVVPFYGQGMNAGFEDCLVFSELMEQY 334 Query: 530 RN-----LHDASAL 556 +N LH+ S L Sbjct: 335 QNNLRICLHEFSRL 348
>Y532_METJA (Q57952) Hypothetical protein MJ0532 precursor| Length = 391 Score = 30.0 bits (66), Expect = 5.2 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +2 Query: 413 TPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLRNLHDAS 550 T G L++GDA PLTGGG+ +A+ ++ + L+D S Sbjct: 271 TDGLLVVGDAAGQISPLTGGGIYLAMDCGLIAGEVASKAIKLNDWS 316
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 30.0 bits (66), Expect = 5.2 Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Frame = +2 Query: 260 PSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAA--------PHPT 415 P+ A+GE A L APQ PP + + + + P P A P P+ Sbjct: 557 PAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPS 616 Query: 416 PG 421 PG Sbjct: 617 PG 618
>SCNAA_XENLA (P51167) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 632 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +2 Query: 251 QKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRS 391 Q+VP I G+++ +VVA PP Y+S +D S+ T+ +RS Sbjct: 572 QQVPHIPRGDLSQRQISVVADITPPPAYES----LDLRSVGTLSSRS 614
>LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog| Length = 1260 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -3 Query: 460 RVSHIESISHQKCTRCWMWCSWHAPIWHCPY-ASLINGCYKRIVDFWRNLR 311 RV+HI +Q RCW C + HC + LI +K D WR LR Sbjct: 1117 RVAHITKSPNQ---RCWRGCGGKGTLLHCWWECPLIRSFWK---DVWRILR 1161
>TRUA_THET8 (Q5SHU9) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 253 Score = 29.6 bits (65), Expect = 6.7 Identities = 26/93 (27%), Positives = 41/93 (44%) Frame = +2 Query: 242 VPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPG 421 +P +KVP + + LK V A ++ P+ + K ++ + PHP+P Sbjct: 70 IPVEKVPEALNRLLPEDLKVVGAREVAPDFHAR------KDALWRAYRYRILVRPHPSP- 122 Query: 422 ALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL 520 LL A +R PL M ALS ++ N L Sbjct: 123 -LLRHRALWVRRPLDLEAMEEALSLLLGRHNFL 154
>TRUA_THET2 (Q72I65) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 253 Score = 29.6 bits (65), Expect = 6.7 Identities = 26/93 (27%), Positives = 41/93 (44%) Frame = +2 Query: 242 VPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPG 421 +P +KVP + + LK V A ++ P+ + K ++ + PHP+P Sbjct: 70 IPVEKVPEALNRLLPEDLKVVGAREVAPDFHAR------KDALWRAYRYRILVRPHPSP- 122 Query: 422 ALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL 520 LL A +R PL M ALS ++ N L Sbjct: 123 -LLRHRALWVRRPLDLEAMEEALSLLLGRHNFL 154
>KSGA_PROAC (Q6AAD7) Dimethyladenosine transferase (EC 2.1.1.-)| (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) (Kasugamycin dimethyltransferase) Length = 298 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = +2 Query: 233 LVDVPGQKVPSIASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNR 388 LV PG K+ + S ++A Y + + +PP ++ + +D G +R R Sbjct: 161 LVAAPGSKIYGVPSAKLAWYAEAIRVGNVPPTVFWP-VPNVDSGLVRITRRR 211
>FPG_NITEU (Q82S12) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)| (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM) Length = 270 Score = 29.3 bits (64), Expect = 8.8 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 20/112 (17%) Frame = +2 Query: 188 SPILFYPISSTEVRCLVDVPGQKVPSIASGEMANYLK------------------TVVAP 313 +P+L +PIS+ + L PGQ++ +IA A YL V+ Sbjct: 29 NPVLRWPISAGLIALL---PGQRINAIA--RRAKYLLFACSRGTLIMHLGMSGNLRVLPE 83 Query: 314 QIPPEIYDSFIAAIDKGSIRTM--PNRSMPAAPHPTPGALLMGDAFNMRHPL 463 PP+++D F +D G + P R GA+L D +HPL Sbjct: 84 STPPQLHDHFDLQVDNGMMLRFRDPRRF---------GAILWWDGDIRQHPL 126
>SCN4A_RAT (P15390) Sodium channel protein type 4 alpha subunit (Sodium| channel protein type IV alpha subunit) (Voltage-gated sodium channel alpha subunit Nav1.4) (Sodium channel protein, skeletal muscle alpha-subunit) (Mu-1) Length = 1840 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = -3 Query: 487 CNSHSSTC*RVSHIESISHQKCTRCWMWCSWHAPIWHC--PYASLINGCYKRIVD 329 C++ S+ + +E +HQKC W C+ IW+C P+ + Y ++D Sbjct: 518 CSADSAISDAMEELEE-AHQKCPPWWYKCAHKVLIWNCCAPWVKFKHIIYLIVMD 571
>SC5A7_DROME (Q9VE46) High-affinity choline transporter 1| Length = 614 Score = 29.3 bits (64), Expect = 8.8 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = -2 Query: 410 DVVQLACSYLALSLCFPYQW 351 DV+QL C ++ L +C P+ W Sbjct: 182 DVIQLFCIFIGLWMCIPFAW 201
>Y046_UREPA (Q9PR99) Hypothetical protein UU046| Length = 791 Score = 29.3 bits (64), Expect = 8.8 Identities = 12/33 (36%), Positives = 21/33 (63%) Frame = +2 Query: 263 SIASGEMANYLKTVVAPQIPPEIYDSFIAAIDK 361 ++ G+ + +K ++ P I PE DS+IA +DK Sbjct: 242 NLKRGDYQSLVKDLLDPNIKPEEIDSYIAMVDK 274
>EXON_HHV11 (P04294) Alkaline exonuclease (EC 3.1.11.-)| Length = 626 Score = 29.3 bits (64), Expect = 8.8 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 1/125 (0%) Frame = +2 Query: 86 CSPKVEVPSCFVGLVLENCQLPHANHGHVILANPSPILFYPISSTEVRCLVDVPGQKVPS 265 C ++ + VG L+ P HG++ +P+ FY EV+C P Sbjct: 324 CGVLMDGHTGMVGASLDILVCPRDIHGYLAPVPKTPLAFY-----EVKCRAKYAFD--PM 376 Query: 266 IASGEMANYLKTVVAPQIPPEIYDSFIAAIDKGSIRTM-PNRSMPAAPHPTPGALLMGDA 442 S A+ + ++A + PE + +FI +I K S+R P R P P + A Sbjct: 377 DPSDPTASAYEDLMAHR-SPEAFRAFIRSIPKPSVRYFAPGR----VPGPEEALVTQDQA 431 Query: 443 FNMRH 457 ++ H Sbjct: 432 WSEAH 436
>PUPA_PSEPU (P25184) Ferric-pseudobactin 358 receptor precursor| Length = 819 Score = 29.3 bits (64), Expect = 8.8 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +2 Query: 383 NRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLR 511 ++ +P+A +P ALL+ + RH L+ GM +ALS +V + Sbjct: 2 SKPLPSALNPLAKALLIRHSLRPRHALSRIGMGLALSSALVFQ 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,544,214 Number of Sequences: 219361 Number of extensions: 2155867 Number of successful extensions: 6190 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 5910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6171 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
