ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63k06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TRX_DROME (P20659) Protein trithorax 30 6.4
2PPNK_YERPS (Q66DA9) Probable inorganic polyphosphate/ATP-NAD kin... 29 8.3
3PPNK_YERPE (Q8ZH09) Probable inorganic polyphosphate/ATP-NAD kin... 29 8.3

>TRX_DROME (P20659) Protein trithorax|
          Length = 3726

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 18/76 (23%), Positives = 33/76 (43%)
 Frame = +1

Query: 184  GTSSRSFYKGILMWREETRILMETRERETQSKSSGASATNDVVLDPSYAEPLLPQSKPTQ 363
            G S+   Y   +M   +   + + +    Q+K++G S    V   P     +LP S  TQ
Sbjct: 2798 GASTSMDYTSPVMVTAKIPPVTQIKRTNAQAKAAGISGVGKVPPQPQVVNKVLPTSIVTQ 2857

Query: 364  KSGLETLMFNLRWKHI 411
            +S ++    NL+   +
Sbjct: 2858 QSQVQVKNSNLKQSQV 2873



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>PPNK_YERPS (Q66DA9) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 293

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 232 ETRILMETRERETQSKSSGASATNDVVLDP 321
           E R L+ET  R T  +S  ++A N+VVL P
Sbjct: 125 EQRFLLETHVRRTNQQSRISTAINEVVLHP 154



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>PPNK_YERPE (Q8ZH09) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 293

 Score = 29.3 bits (64), Expect = 8.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 232 ETRILMETRERETQSKSSGASATNDVVLDP 321
           E R L+ET  R T  +S  ++A N+VVL P
Sbjct: 125 EQRFLLETHVRRTNQQSRISTAINEVVLHP 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,496,538
Number of Sequences: 219361
Number of extensions: 1340676
Number of successful extensions: 4050
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4049
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4815021120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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