Clone Name | bah63k06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TRX_DROME (P20659) Protein trithorax | 30 | 6.4 | 2 | PPNK_YERPS (Q66DA9) Probable inorganic polyphosphate/ATP-NAD kin... | 29 | 8.3 | 3 | PPNK_YERPE (Q8ZH09) Probable inorganic polyphosphate/ATP-NAD kin... | 29 | 8.3 |
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>TRX_DROME (P20659) Protein trithorax| Length = 3726 Score = 29.6 bits (65), Expect = 6.4 Identities = 18/76 (23%), Positives = 33/76 (43%) Frame = +1 Query: 184 GTSSRSFYKGILMWREETRILMETRERETQSKSSGASATNDVVLDPSYAEPLLPQSKPTQ 363 G S+ Y +M + + + + Q+K++G S V P +LP S TQ Sbjct: 2798 GASTSMDYTSPVMVTAKIPPVTQIKRTNAQAKAAGISGVGKVPPQPQVVNKVLPTSIVTQ 2857 Query: 364 KSGLETLMFNLRWKHI 411 +S ++ NL+ + Sbjct: 2858 QSQVQVKNSNLKQSQV 2873
>PPNK_YERPS (Q66DA9) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 293 Score = 29.3 bits (64), Expect = 8.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 232 ETRILMETRERETQSKSSGASATNDVVLDP 321 E R L+ET R T +S ++A N+VVL P Sbjct: 125 EQRFLLETHVRRTNQQSRISTAINEVVLHP 154
>PPNK_YERPE (Q8ZH09) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 293 Score = 29.3 bits (64), Expect = 8.3 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +1 Query: 232 ETRILMETRERETQSKSSGASATNDVVLDP 321 E R L+ET R T +S ++A N+VVL P Sbjct: 125 EQRFLLETHVRRTNQQSRISTAINEVVLHP 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,496,538 Number of Sequences: 219361 Number of extensions: 1340676 Number of successful extensions: 4050 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4049 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)