ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63j15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186390.2| Oryza sativa (japonica cultivar-group), mRNA 186 7e-44
2dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 7e-44
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
4dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
5dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
6gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence 119 1e-23
7gb|AY108527.1| Zea mays PCO089202 mRNA sequence 119 1e-23
8gb|AY109152.1| Zea mays PCO089203 mRNA sequence 107 5e-20
9dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
10dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
11gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 64 7e-07
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 7e-07
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
14emb|AL645664.8| Mouse DNA sequence from clone RP23-417P22 on chr... 42 2.4
15ref|NM_197325.1| Oryza sativa (japonica cultivar-group) unknown ... 40 9.5
16gb|AY029303.1| Strongylocentrotus purpuratus ADAM precursor, mRN... 40 9.5
17ref|XM_743971.1| Aspergillus fumigatus Af293 Rab geranylgeranylt... 40 9.5
18gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 9.5
19gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosom... 40 9.5
20gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 9.5
21dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 9.5
22gb|AC011341.3| Homo sapiens chromosome 5 clone CTC-269F1, comple... 40 9.5
23gb|AC008716.7| Homo sapiens chromosome 5 clone CTB-85P21, comple... 40 9.5
24gb|AF410801.1|AF410801 Xenopus laevis nodal related 2 (Xnr2) gen... 40 9.5
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
26gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 40 9.5
27gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complet... 40 9.5
28ref|NM_214470.1| Strongylocentrotus purpuratus ADAM (LOC373195),... 40 9.5
29gb|AY487776.1| Natrix tessellata isolate T299 NADH dehydrogenase... 40 9.5
30gb|AY487773.1| Natrix tessellata isolate T157 NADH dehydrogenase... 40 9.5
31gb|AY870641.1| Natrix tessellata voucher CAS 182901 NADH dehydro... 40 9.5
32emb|AL928980.7| Zebrafish DNA sequence from clone DKEY-77M16 in ... 40 9.5
33gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 9.5
34gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5 
>ref|NM_186390.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 667

 Score =  186 bits (94), Expect = 7e-44
 Identities = 154/174 (88%)
 Strand = Plus / Plus

                                                                       
Query: 94  ctccgccgtcacagatgtcgagtactgcaataagcacaaaaactacccggtgaaggtgag 153
           |||||||||||| || ||||||||||||||||||  ||| || |||||||||||||||||
Sbjct: 93  ctccgccgtcaccgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgag 152

                                                                       
Query: 154 cggcgtggagatcgtgcctgatccggtcgagcgcggcgtgccagccaccttcaagatctc 213
           |||||||||||||||||| ||||||||||  ||||||| ||| || ||||||||||||||
Sbjct: 153 cggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctc 212

                                                                 
Query: 214 cgcttccactgataaaaacatcacagaggggaagctggttattgatgttaaata 267
           |||||||||||||||||  |||    | |||||||||||||||||||| |||||
Sbjct: 213 cgcttccactgataaaactatcggtaaagggaagctggttattgatgtgaaata 266



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 87/105 (82%)
 Strand = Plus / Plus

                                                                       
Query: 355 gcaaaccttaccatcaatcactccaccaggttcttacaccattcagatgaagatgctcgg 414
           ||||||| | ||||||  |||||||||||| |||||||||||    ||||||||||| ||
Sbjct: 354 gcaaaccctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctggg 413

                                                        
Query: 415 aaagcatgatgaggaattgagctgcatctccttcgggttcagcat 459
             |  | ||||||||  ||||||||||||| ||||||||||||||
Sbjct: 414 tgataacgatgaggagctgagctgcatctcgttcgggttcagcat 458
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>dbj|AK060475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F03, full
           insert sequence
          Length = 678

 Score =  186 bits (94), Expect = 7e-44
 Identities = 154/174 (88%)
 Strand = Plus / Plus

                                                                       
Query: 94  ctccgccgtcacagatgtcgagtactgcaataagcacaaaaactacccggtgaaggtgag 153
           |||||||||||| || ||||||||||||||||||  ||| || |||||||||||||||||
Sbjct: 93  ctccgccgtcaccgacgtcgagtactgcaataagggcaagaagtacccggtgaaggtgag 152

                                                                       
Query: 154 cggcgtggagatcgtgcctgatccggtcgagcgcggcgtgccagccaccttcaagatctc 213
           |||||||||||||||||| ||||||||||  ||||||| ||| || ||||||||||||||
Sbjct: 153 cggcgtggagatcgtgcccgatccggtcgcccgcggcgagcccgcaaccttcaagatctc 212

                                                                 
Query: 214 cgcttccactgataaaaacatcacagaggggaagctggttattgatgttaaata 267
           |||||||||||||||||  |||    | |||||||||||||||||||| |||||
Sbjct: 213 cgcttccactgataaaactatcggtaaagggaagctggttattgatgtgaaata 266



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 87/105 (82%)
 Strand = Plus / Plus

                                                                       
Query: 355 gcaaaccttaccatcaatcactccaccaggttcttacaccattcagatgaagatgctcgg 414
           ||||||| | ||||||  |||||||||||| |||||||||||    ||||||||||| ||
Sbjct: 354 gcaaaccctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctggg 413

                                                        
Query: 415 aaagcatgatgaggaattgagctgcatctccttcgggttcagcat 459
             |  | ||||||||  ||||||||||||| ||||||||||||||
Sbjct: 414 tgataacgatgaggagctgagctgcatctcgttcgggttcagcat 458
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                           
Query: 137     tacccggtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgcca 196
               ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||| 
Sbjct: 3231255 tacccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagccc 3231314

                                           
Query: 197     gccaccttcaagatctccgcttccactg 224
               || |||||||||||||||||||||||||
Sbjct: 3231315 gcaaccttcaagatctccgcttccactg 3231342



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                     
Query: 422     gatgaggaattgagctgcatctccttcgggttcagcat 459
               ||||||||  ||||||||||||| ||||||||||||||
Sbjct: 3233647 gatgaggagctgagctgcatctcgttcgggttcagcat 3233684



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 242     gggaagctggttattgatgttaaata 267
               |||||||||||||||||||| |||||
Sbjct: 3233325 gggaagctggttattgatgtgaaata 3233350



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 94      ctccgccgtcacagatgtcgagtactgca 122
               |||||||||||| || |||||||||||||
Sbjct: 3231087 ctccgccgtcaccgacgtcgagtactgca 3231115
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0455F03
          Length = 158201

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                          
Query: 137    tacccggtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgcca 196
              ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||| 
Sbjct: 146245 tacccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagccc 146304

                                          
Query: 197    gccaccttcaagatctccgcttccactg 224
              || |||||||||||||||||||||||||
Sbjct: 146305 gcaaccttcaagatctccgcttccactg 146332



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 422    gatgaggaattgagctgcatctccttcgggttcagcat 459
              ||||||||  ||||||||||||| ||||||||||||||
Sbjct: 148637 gatgaggagctgagctgcatctcgttcgggttcagcat 148674



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 242    gggaagctggttattgatgttaaata 267
              |||||||||||||||||||| |||||
Sbjct: 148315 gggaagctggttattgatgtgaaata 148340



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 94     ctccgccgtcacagatgtcgagtactgca 122
              |||||||||||| || |||||||||||||
Sbjct: 146077 ctccgccgtcaccgacgtcgagtactgca 146105
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1714_H10
          Length = 191580

 Score =  127 bits (64), Expect = 5e-26
 Identities = 82/88 (93%)
 Strand = Plus / Plus

                                                                         
Query: 137   tacccggtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgcca 196
             ||||||||||||||||||||||||||||||||||| ||||||||||  ||||||| ||| 
Sbjct: 40948 tacccggtgaaggtgagcggcgtggagatcgtgcccgatccggtcgcccgcggcgagccc 41007

                                         
Query: 197   gccaccttcaagatctccgcttccactg 224
             || |||||||||||||||||||||||||
Sbjct: 41008 gcaaccttcaagatctccgcttccactg 41035



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 422   gatgaggaattgagctgcatctccttcgggttcagcat 459
             ||||||||  ||||||||||||| ||||||||||||||
Sbjct: 43340 gatgaggagctgagctgcatctcgttcgggttcagcat 43377



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 242   gggaagctggttattgatgttaaata 267
             |||||||||||||||||||| |||||
Sbjct: 43018 gggaagctggttattgatgtgaaata 43043



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 94    ctccgccgtcacagatgtcgagtactgca 122
             |||||||||||| || |||||||||||||
Sbjct: 40780 ctccgccgtcaccgacgtcgagtactgca 40808
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>gb|BT018231.1| Zea mays clone EL01N0562D11.c mRNA sequence
          Length = 606

 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 137 tacccggtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgcca 196
           |||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||  ||| 
Sbjct: 68  tacccggtgaaggtgagcggggtgcagatcgtgcccgatccggtcgagcccggcaagccc 127

                                                                   
Query: 197 gccaccttcaagatctccgcttccactgataaaaacatcacagaggggaagctggt 252
           ||||| ||||||||||||||||| |||||||||| ||||    |||||||||||||
Sbjct: 128 gccactttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggt 183



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 434 agctgcatctccttcgggttcagcattgg 462
           ||||||||||| ||||| |||||||||||
Sbjct: 365 agctgcatctcgttcggcttcagcattgg 393
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>gb|AY108527.1| Zea mays PCO089202 mRNA sequence
          Length = 666

 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                       
Query: 137 tacccggtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgcca 196
           |||||||||||||||||||| ||| |||||||||| ||||||||||||| ||||  ||| 
Sbjct: 147 tacccggtgaaggtgagcggggtgcagatcgtgcccgatccggtcgagcccggcaagccc 206

                                                                   
Query: 197 gccaccttcaagatctccgcttccactgataaaaacatcacagaggggaagctggt 252
           ||||| ||||||||||||||||| |||||||||| ||||    |||||||||||||
Sbjct: 207 gccactttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggt 262



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 434 agctgcatctccttcgggttcagcattgg 462
           ||||||||||| ||||| |||||||||||
Sbjct: 444 agctgcatctcgttcggcttcagcattgg 472
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>gb|AY109152.1| Zea mays PCO089203 mRNA sequence
          Length = 811

 Score =  107 bits (54), Expect = 5e-20
 Identities = 102/118 (86%)
 Strand = Plus / Plus

                                                                       
Query: 135 actacccggtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgc 194
           |||||||||||||||||||||| ||| ||||| |||| ||||||||||| | ||||  ||
Sbjct: 156 actacccggtgaaggtgagcggggtgcagatcctgcccgatccggtcgaacccggcaagc 215

                                                                     
Query: 195 cagccaccttcaagatctccgcttccactgataaaaacatcacagaggggaagctggt 252
           | ||||| ||||||||||||||||| |||||||||| ||||    |||||||||||||
Sbjct: 216 ccgccactttcaagatctccgcttctactgataaaaccatcgagaaggggaagctggt 273



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 432 tgagctgcatctccttcgggttcagcattggcttc 466
           ||||||||||||| |||||||||||||| ||||||
Sbjct: 453 tgagctgcatctcgttcgggttcagcatcggcttc 487
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>dbj|AK059284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D07, full
           insert sequence
          Length = 566

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 173 gatccggtcgagcgcggcgtgccagccaccttcaagatctccgcttccactgataaaaac 232
           ||||||||||  ||||||| ||| || |||||||||||||||||||||||||||||||  
Sbjct: 3   gatccggtcgcccgcggcgagcccgcaaccttcaagatctccgcttccactgataaaact 62

                                              
Query: 233 atcacagaggggaagctggttattgatgttaaata 267
           |||    | |||||||||||||||||||| |||||
Sbjct: 63  atcggtaaagggaagctggttattgatgtgaaata 97



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 87/105 (82%)
 Strand = Plus / Plus

                                                                       
Query: 355 gcaaaccttaccatcaatcactccaccaggttcttacaccattcagatgaagatgctcgg 414
           ||||||| | ||||||  |||||||||||| |||||||||||    ||||||||||| ||
Sbjct: 185 gcaaaccctgccatcatacactccaccaggctcttacaccatcaccatgaagatgctggg 244

                                                        
Query: 415 aaagcatgatgaggaattgagctgcatctccttcgggttcagcat 459
             |  | ||||||||  ||||||||||||| ||||||||||||||
Sbjct: 245 tgataacgatgaggagctgagctgcatctcgttcgggttcagcat 289
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>dbj|AK106623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B04, full
           insert sequence
          Length = 678

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143 gtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgccagccacc 202
           |||||||||||||| || |||||||| ||||| || ||||   ||||   ||| ||||||
Sbjct: 183 gtgaaggtgagcggagtagagatcgtccctgaccccgtcgtcagcgggcagccggccacc 242

                                                          
Query: 203 ttcaagatctccgcttccactgataaaaacatcacagaggggaagct 249
           |||||||||||||| ||||| ||||||| ||||||  ||||||||||
Sbjct: 243 ttcaagatctccgcatccacggataaaagcatcactaaggggaagct 289



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 362 ttaccatcaatcactccaccaggttcttacac 393
           |||||||||||||| |||||||||||||||||
Sbjct: 402 ttaccatcaatcaccccaccaggttcttacac 433
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 143   gtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgccagccacc 202
             |||||||||||||| ||||||||||| ||||| || ||||   ||||   ||| ||||||
Sbjct: 88253 gtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccggccacc 88312

                                 
Query: 203   ttcaagatctccgcttccac 222
             |||||||||||||| |||||
Sbjct: 88313 ttcaagatctccgcatccac 88332
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                            
Query: 143      gtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgccagccacc 202
                |||||||||||||| ||||||||||| ||||| || ||||   ||||   ||| ||||||
Sbjct: 32436125 gtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccggccacc 32436184

                                    
Query: 203      ttcaagatctccgcttccac 222
                |||||||||||||| |||||
Sbjct: 32436185 ttcaagatctccgcatccac 32436204
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                            
Query: 143      gtgaaggtgagcggcgtggagatcgtgcctgatccggtcgagcgcggcgtgccagccacc 202
                |||||||||||||| ||||||||||| ||||| || ||||   ||||   ||| ||||||
Sbjct: 32526635 gtgaaggtgagcggagtggagatcgtccctgaccccgtcgtcagcgggcagccggccacc 32526694

                                    
Query: 203      ttcaagatctccgcttccac 222
                |||||||||||||| |||||
Sbjct: 32526695 ttcaagatctccgcatccac 32526714
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>emb|AL645664.8| Mouse DNA sequence from clone RP23-417P22 on chromosome 13 Contains the
             5' end of the Gmds gene for GDP-mannose 4, 6-dehydratase,
             the 3' end of a novel gene and a CpG island, complete
             sequence
          Length = 193914

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 647   tgaaatatgaaactatgttag 667
             |||||||||||||||||||||
Sbjct: 27053 tgaaatatgaaactatgttag 27073
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>ref|NM_197325.1| Oryza sativa (japonica cultivar-group) unknown protein
          (OSJNBa0026L12.25), mRNA
          Length = 367

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 46 cttcctcgccgccgcagccg 65
          ||||||||||||||||||||
Sbjct: 19 cttcctcgccgccgcagccg 38
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>gb|AY029303.1| Strongylocentrotus purpuratus ADAM precursor, mRNA, complete cds
          Length = 3072

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 569  tctgtgtaacactcgtgggt 588
            ||||||||||||||||||||
Sbjct: 2049 tctgtgtaacactcgtgggt 2068
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>ref|XM_743971.1| Aspergillus fumigatus Af293 Rab geranylgeranyltransferase, subunit
           beta (Afu7g04460) partial mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 389 tacaccattcagatgaagatgctc 412
           ||||||||||||| ||||||||||
Sbjct: 63  tacaccattcagacgaagatgctc 40
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 151     gagcggcgtggagatcgtgc 170
               ||||||||||||||||||||
Sbjct: 4662651 gagcggcgtggagatcgtgc 4662632
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>gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosome 12, complete sequence
          Length = 218561

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 640    ggtgtaatgaaatatgaaactatg 663
              |||||||| |||||||||||||||
Sbjct: 130915 ggtgtaattaaatatgaaactatg 130892
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
              sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     cttcctcgccgccgcagccg 65
              ||||||||||||||||||||
Sbjct: 104488 cttcctcgccgccgcagccg 104469
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 640     ggtgtaatgaaatatgaaac 659
               ||||||||||||||||||||
Sbjct: 1293689 ggtgtaatgaaatatgaaac 1293708
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>gb|AC011341.3| Homo sapiens chromosome 5 clone CTC-269F1, complete sequence
          Length = 51684

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   cagcattggcttccttgccc 473
             ||||||||||||||||||||
Sbjct: 30291 cagcattggcttccttgccc 30310
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>gb|AC008716.7| Homo sapiens chromosome 5 clone CTB-85P21, complete sequence
          Length = 184589

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  cagcattggcttccttgccc 473
            ||||||||||||||||||||
Sbjct: 7226 cagcattggcttccttgccc 7207
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>gb|AF410801.1|AF410801 Xenopus laevis nodal related 2 (Xnr2) gene, partial cds
          Length = 4552

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 629  agttggaacatggtgtaatg 648
            ||||||||||||||||||||
Sbjct: 1276 agttggaacatggtgtaatg 1257
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 46       cttcctcgccgccgcagccg 65
                ||||||||||||||||||||
Sbjct: 19271893 cttcctcgccgccgcagccg 19271912
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>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tcctcgccgccgcagccgtc 67
             ||||||||||||||||||||
Sbjct: 39597 tcctcgccgccgcagccgtc 39616
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>gb|AC067947.6| Homo sapiens BAC clone RP11-492I5 from 2, complete sequence
          Length = 137457

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    ccattcagatgaagatgctc 412
              ||||||||||||||||||||
Sbjct: 118121 ccattcagatgaagatgctc 118102
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>ref|NM_214470.1| Strongylocentrotus purpuratus ADAM (LOC373195), mRNA
          Length = 3072

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 569  tctgtgtaacactcgtgggt 588
            ||||||||||||||||||||
Sbjct: 2049 tctgtgtaacactcgtgggt 2068
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>gb|AY487776.1| Natrix tessellata isolate T299 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 tggttattgatgttaaatat 268
           ||||||||||||||||||||
Sbjct: 907 tggttattgatgttaaatat 888
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>gb|AY487773.1| Natrix tessellata isolate T157 NADH dehydrogenase subunit 2 (ND2)
           gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 tggttattgatgttaaatat 268
           ||||||||||||||||||||
Sbjct: 907 tggttattgatgttaaatat 888
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>gb|AY870641.1| Natrix tessellata voucher CAS 182901 NADH dehydrogenase subunit 2
           (ND2) gene, complete cds; mitochondrial
          Length = 1029

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 249 tggttattgatgttaaatat 268
           ||||||||||||||||||||
Sbjct: 907 tggttattgatgttaaatat 888
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>emb|AL928980.7| Zebrafish DNA sequence from clone DKEY-77M16 in linkage group 11,
              complete sequence
          Length = 167387

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 655    gaaactatgttagtttttga 674
              ||||||||||||||||||||
Sbjct: 113882 gaaactatgttagtttttga 113901
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     gcctgatccggtcgagcgcg 188
               ||||||||||||||||||||
Sbjct: 2235017 gcctgatccggtcgagcgcg 2234998
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 46       cttcctcgccgccgcagccg 65
                ||||||||||||||||||||
Sbjct: 19283169 cttcctcgccgccgcagccg 19283188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,301,784
Number of Sequences: 3902068
Number of extensions: 5301784
Number of successful extensions: 114399
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113895
Number of HSP's gapped (non-prelim): 497
length of query: 691
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 668
effective length of database: 17,143,297,704
effective search space: 11451722866272
effective search space used: 11451722866272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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