Clone Information

BLAST Search Result

Clone Name	bah63j07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protei...	245	7e-65
2	ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing pro...	244	1e-64
3	ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing prot...	228	9e-60
4	ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing prot...	223	3e-58
5	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	184	2e-46
6	ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing pro...	169	8e-42
7	ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing pro...	165	1e-40
8	ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing pro...	165	1e-40
9	ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing pro...	163	3e-40
10	ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing pro...	161	1e-39
11	ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-conta...	144	2e-34
12	ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing pro...	140	4e-33
13	ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing prot...	139	9e-33
14	TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36)...	44	3e-04
15	TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 3...	43	7e-04
16	TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 3...	43	9e-04
17	CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity fa...	43	9e-04
18	CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity fa...	42	0.001
19	SCP3_SCHPO (P41000) Protein scp3	39	0.013
20	CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing pro...	38	0.022
21	ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing pro...	38	0.022
22	MKRN2_MOUSE (Q9ERV1) Makorin-2	38	0.022
23	MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)	38	0.022
24	ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing pro...	38	0.022
25	CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing pro...	38	0.022
26	ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing pro...	37	0.037
27	TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 3...	37	0.037
28	TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 3...	37	0.037
29	ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing pro...	37	0.048
30	YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III	37	0.048
31	CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)	37	0.048
32	ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing pro...	37	0.063
33	MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)	35	0.14
34	CTH1_YEAST (P47976) Zinc finger protein CTH1	35	0.14
35	TIS1_DROME (P47980) Protein TIS11 (dTIS11)	35	0.18
36	ZN183_BOVIN (Q67ER4) Zinc finger protein 183	35	0.18
37	DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (...	34	0.31
38	MKRN1_MACEU (Q9TT91) Makorin-1	34	0.41
39	R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger prote...	34	0.41
40	MKRN1_MOUSE (Q9QXP6) Makorin-1	34	0.41
41	R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger prote...	33	0.53
42	MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5	33	0.53
43	CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24	33	0.53
44	CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24	33	0.53
45	MKRN2_BRARE (Q9DFG8) Makorin-2	33	0.53
46	CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24	33	0.53
47	U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliar...	33	0.53
48	CD244_MOUSE (Q07763) Natural killer cell receptor 2B4 precursor ...	33	0.53
49	K0853_HUMAN (Q5T200) Protein KIAA0853	33	0.53
50	CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24	33	0.70
51	MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)	33	0.70
52	ZFS1_SCHPO (P47979) Zinc-finger protein zfs1	33	0.70
53	CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed w...	33	0.91
54	CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24	33	0.91
55	TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) ...	33	0.91
56	LEE1_YEAST (Q02799) Zinc finger protein LEE1	33	0.91
57	DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (...	33	0.91
58	RN113_CAEEL (O17917) Putative RING finger protein 113 homolog	32	1.2
59	CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24	32	1.2
60	TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (E...	32	1.2
61	TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)	32	1.2
62	U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliar...	32	1.2
63	U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar...	32	1.6
64	U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliar...	32	1.6
65	VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) ...	32	1.6
66	YTH1_YEAST (Q06102) Protein YTH1	32	2.0
67	G6PD_CRIGR (O55044) Glucose-6-phosphate 1-dehydrogenase (EC 1.1....	32	2.0
68	G6PD1_MOUSE (Q00612) Glucose-6-phosphate 1-dehydrogenase X (EC 1...	32	2.0
69	CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed w...	32	2.0
70	TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)	31	2.6
71	CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24	31	2.6
72	CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24	31	2.6
73	CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24	31	2.6
74	TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) ...	31	2.6
75	PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu...	31	2.6
76	MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF...	31	2.6
77	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	31	3.5
78	ZGPAT_HUMAN (Q8N5A5) Zinc finger CCCH-type with G patch domain p...	31	3.5
79	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	31	3.5
80	PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region p...	31	3.5
81	PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region p...	31	3.5
82	ZGPAT_MOUSE (Q8VDM1) Zinc finger CCCH-type with G patch domain p...	31	3.5
83	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	31	3.5
84	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	31	3.5
85	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	31	3.5
86	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	31	3.5
87	PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region pro...	31	3.5
88	Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor	31	3.5
89	MEX6_CAEEL (Q09436) Zinc finger protein mex-6	31	3.5
90	PRP12_MOUSE (Q8BZ20) Poly [ADP-ribose] polymerase 12 (EC 2.4.2.3...	30	4.5
91	CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24	30	4.5
92	PRP12_HUMAN (Q9H0J9) Poly [ADP-ribose] polymerase 12 (EC 2.4.2.3...	30	4.5
93	PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region pro...	30	5.9
94	CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24	30	5.9
95	PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region p...	30	5.9
96	SSH_DROME (Q6NN85) Protein phosphatase Slingshot (EC 3.1.3.48) (...	30	7.7
97	ADA2_HUMAN (O75478) Transcriptional adapter 2-like (ADA2-like pr...	30	7.7

>ZFNL_PEA (Q9SWF9) Zinc finger CCCH type domain-containing protein ZFN-like|
          Length = 417

 Score =  245 bits (626), Expect = 7e-65
 Identities = 112/165 (67%), Positives = 131/165 (79%), Gaps = 1/165 (0%)
 Frame = +2

Query: 137 EATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAAR 316
           EA WQM L     +ME GPYPE  GE DCSYY+RTG CRFG TC+FNHP +RKLA+A AR
Sbjct: 9   EAMWQMNLRSSE-TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATAR 67

Query: 317 MKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKEC 496
           MKGE+P R+GQPECQYYLKTGTCKFGATC+FHHP++KA +A    LN+LGYPLR NE E 
Sbjct: 68  MKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESER 127

Query: 497 VYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSICSPG-QSTTSPG 628
            YYLRTGQCKF +TCKFHHPQPS+ ++++R S   P  QS T+PG
Sbjct: 128 AYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPG 172



 Score =  100 bits (250), Expect = 3e-21
 Identities = 46/94 (48%), Positives = 57/94 (60%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           +P R  QPECQ+Y+KTG CKFGA C+FHHPRE+   A    L+ +G PLR  E  CV+Y 
Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYS 334

Query: 509 RTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQ 610
           R G CKF  +CKF HP    T         +PG+
Sbjct: 335 RYGICKFGPSCKFDHPMGIFTYNVASPLADTPGR 368



 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG-EYPYRVGQPECQYYL 370
           +PER  + +C +YM+TG C+FG  C+F+HP +R++      +     P R G+P C +Y 
Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYS 334

Query: 371 KTGTCKFGATCKFHHP 418
           + G CKFG +CKF HP
Sbjct: 335 RYGICKFGPSCKFDHP 350



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 179 MEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHP 283
           + P   P R GE  C +Y R G C+FG +CKF+HP
Sbjct: 316 LSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 350

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>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score =  244 bits (624), Expect = 1e-64
 Identities = 107/157 (68%), Positives = 124/157 (78%)
 Frame = +2

Query: 134 GEATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAA 313
           GE  WQ     G  +M+PGPYPER GE DC+YY+RTG CRFG++C+FNHP DR LA+A+A
Sbjct: 57  GEGMWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASA 116

Query: 314 RMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKE 493
           RMKGEYP R+GQPECQYYLKTGTCKFG TCKFHHPREKA IA   QLN LGYPLR +EKE
Sbjct: 117 RMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKE 176

Query: 494 CVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSICSP 604
           C YYL+TGQCK+ +TCKFHHP+  + M + R S   P
Sbjct: 177 CAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYP 213



 Score = 99.4 bits (246), Expect = 8e-21
 Identities = 44/89 (49%), Positives = 56/89 (62%)
 Frame = +2

Query: 308 AARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNE 487
           A + +  +P R  QPECQYY+KTG CKFGA CKFHHPR ++       L+ +G PLR  E
Sbjct: 322 ALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGE 381

Query: 488 KECVYYLRTGQCKFASTCKFHHPQPSSTM 574
           + C +Y R G CKF + CKF HP  +  M
Sbjct: 382 ELCKFYSRYGICKFGANCKFDHPTMAPPM 410



 Score = 80.1 bits (196), Expect = 5e-15
 Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG-EYPYRVGQPECQYYL 370
           +PER  + +C YYM+TG C+FG  CKF+HP  R +      +     P R G+  C++Y 
Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYS 388

Query: 371 KTGTCKFGATCKFHHP 418
           + G CKFGA CKF HP
Sbjct: 389 RYGICKFGANCKFDHP 404



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = +2

Query: 179 MEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHP 283
           + P   P R GE  C +Y R G C+FG  CKF+HP
Sbjct: 370 LSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404

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>ZFN1_ARATH (Q8GXX7) Zinc finger CCCH type domain-containing protein ZFN1|
          Length = 397

 Score =  228 bits (582), Expect = 9e-60
 Identities = 101/152 (66%), Positives = 117/152 (76%)
 Frame = +2

Query: 137 EATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAAR 316
           +A WQM L     +ME G YPER GE DCSYY+RTG CRFG TC+FNHP DR+L +A AR
Sbjct: 19  DAMWQMNLSSDE-TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATAR 77

Query: 317 MKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKEC 496
           M+GEYP R+GQPEC+YYLKTGTCKFG TCKFHHPR KA IA    LN+LGYPLR NE +C
Sbjct: 78  MRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDC 137

Query: 497 VYYLRTGQCKFASTCKFHHPQPSSTMVAIRSS 592
            Y+LRTG CKF  TCKF+HPQP  T + + +S
Sbjct: 138 AYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTS 169



 Score =  102 bits (253), Expect = 1e-21
 Identities = 43/76 (56%), Positives = 52/76 (68%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           +P R GQPECQ+Y+KTG CKFG  CKFHHPR++ A      L+ +G PLR  E  CV+Y 
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYT 330

Query: 509 RTGQCKFASTCKFHHP 556
           R G CKF  +CKF HP
Sbjct: 331 RYGICKFGPSCKFDHP 346



 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG-EYPYRVGQPECQYYL 370
           +PER G+ +C +YM+TG C+FG  CKF+HP DR+       +     P R G+P C +Y 
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYT 330

Query: 371 KTGTCKFGATCKFHHP 418
           + G CKFG +CKF HP
Sbjct: 331 RYGICKFGPSCKFDHP 346



 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +2

Query: 467 YPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 559
           +P R  + EC +Y++TG CKF + CKFHHP+
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPR 301

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>ZFN3_ARATH (Q8L7N8) Zinc finger CCCH type domain-containing protein ZFN3|
          Length = 375

 Score =  223 bits (569), Expect = 3e-58
 Identities = 105/163 (64%), Positives = 120/163 (73%), Gaps = 3/163 (1%)
 Frame = +2

Query: 140 ATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARM 319
           A WQM LG        G YPER GE DC+YY+RTG CRFG TC+FNHP DRKL +A AR+
Sbjct: 21  AMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARI 80

Query: 320 KGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECV 499
           KGEYP R+GQPEC++YLKTGTCKFG TCKFHHPR KA I  S  +NVL YPLR NE +C 
Sbjct: 81  KGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCS 140

Query: 500 YYLRTGQCKFASTCKFHHPQPSST--MVAIRSS-ICSPGQSTT 619
           Y+LR GQCKF  TCKF+HPQ  ST  MV++R S + S  QS T
Sbjct: 141 YFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLT 183



 Score =  100 bits (248), Expect = 5e-21
 Identities = 45/97 (46%), Positives = 59/97 (60%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           +P R GQPECQ+Y+KTG CKFG  CKFHHPR++        L+ +G PLR  E  CV+Y 
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYS 299

Query: 509 RTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQSTT 619
           R G CKF  +CKF HP     +    ++  SP  S++
Sbjct: 300 RYGICKFGPSCKFDHPM---RVFTYNNNTASPSPSSS 333



 Score = 85.9 bits (211), Expect = 9e-17
 Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
 Frame = +2

Query: 95  PTGLTIGSHYG--STG-EATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVT 265
           P+G   GS  G  S+G  +   + LG   L  E   +PER G+ +C +YM+TG C+FG  
Sbjct: 205 PSGFASGSQGGLFSSGFHSGNSVPLGFYALPRE-NVFPERPGQPECQFYMKTGDCKFGTV 263

Query: 266 CKFNHPADRKLAVAAARMKG-EYPYRVGQPECQYYLKTGTCKFGATCKFHHP 418
           CKF+HP DR+       +     P R G+P C +Y + G CKFG +CKF HP
Sbjct: 264 CKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315

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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score =  184 bits (467), Expect = 2e-46
 Identities = 80/147 (54%), Positives = 97/147 (65%)
 Frame = +2

Query: 137 EATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAAR 316
           E+ W++ LG          YPER G  DC+YYMRTG C +G  C++NHP DR    A  R
Sbjct: 30  ESMWRLGLGSDS-------YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVR 82

Query: 317 MKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKEC 496
             G+YP R G+P CQ+YLKTGTCKFGA+CKFHHP+          LN+ GYP+R  + EC
Sbjct: 83  ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNEC 142

Query: 497 VYYLRTGQCKFASTCKFHHPQPSSTMV 577
            YYL+TGQCKF  TCKFHHPQP+ T V
Sbjct: 143 SYYLKTGQCKFGITCKFHHPQPAGTTV 169



 Score =  104 bits (259), Expect = 2e-22
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           +P R G+PECQYYLKTG CKFG +CKFHHPR++     +  L+ +G PLR   + C +Y+
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYV 345

Query: 509 RTGQCKFASTCKFHHP 556
           + G CKF STCKF HP
Sbjct: 346 QNGFCKFGSTCKFDHP 361



 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
 Frame = +2

Query: 170 GLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG-EYPYRVG 346
           G+  +   +PER GE +C YY++TG C+FG +CKF+HP DR    A   +     P R G
Sbjct: 278 GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPG 337

Query: 347 QPECQYYLKTGTCKFGATCKFHHP----REKAAIAISAQLNVLGYPL 475
              C +Y++ G CKFG+TCKF HP    R   + +  A   V  YP+
Sbjct: 338 VQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPV 384



 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +2

Query: 467 YPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 559
           +P R  E EC YYL+TG CKF ++CKFHHP+
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPR 316



 Score = 41.6 bits (96), Expect = 0.002
 Identities = 14/38 (36%), Positives = 25/38 (65%)
 Frame = +2

Query: 467 YPLRLNEKECVYYLRTGQCKFASTCKFHHPQPSSTMVA 580
           YP R    +C YY+RTG C + + C+++HP+  +++ A
Sbjct: 42  YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEA 79

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>ZFNL3_ORYSA (Q5NAV3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 466

 Score =  169 bits (427), Expect = 8e-42
 Identities = 81/153 (52%), Positives = 100/153 (65%), Gaps = 12/153 (7%)
 Frame = +2

Query: 137 EATWQMTLGCGG----LSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAV 304
           E+ W+M LG GG     ++  G  PER GE DC YY+RTG C +G  C++NHP DR    
Sbjct: 25  ESMWRMGLGGGGGGGGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDR---A 81

Query: 305 AAARMKG--------EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNV 460
           AAA + G        EYP R GQP C+YY+K GTCKFG+ CK+ HPRE +  A+   LN 
Sbjct: 82  AAAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAV--MLNS 139

Query: 461 LGYPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 559
            GYPLR  EK+C YY++TG CKF STCKFHHP+
Sbjct: 140 SGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPE 172



 Score =  102 bits (253), Expect = 1e-21
 Identities = 45/97 (46%), Positives = 61/97 (62%)
 Frame = +2

Query: 305 AAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLN 484
           ++++ +  +P R GQPECQYYLKTG+CKFG+ CK+HHP+       +  L+ LG PLR  
Sbjct: 288 SSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPG 347

Query: 485 EKECVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSI 595
            + C YY + G CKF  TCKF HP  + +     SSI
Sbjct: 348 SQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSI 384



 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
 Frame = +2

Query: 299 AVAAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAI----SAQLNVLG 466
           AVAA R+    P R G+ +C YYL+TG C +G  C+++HPR++AA A+        +   
Sbjct: 42  AVAAGRL----PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAE 97

Query: 467 YPLRLNEKECVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQS 613
           YP R  +  C YY++ G CKF S CK+ HP+  S    + +S   P +S
Sbjct: 98  YPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAVMLNSSGYPLRS 146



 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
 Frame = +2

Query: 122 YGSTGEATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLA 301
           YGS        T+       EP  +P R G+ +C YY++TG C+FG  CK++HP      
Sbjct: 273 YGSQYAPLSSSTMPSSSSKQEPA-FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTP 331

Query: 302 VAAARMKG-EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISA----QLNVLG 466
            +   +     P R G   C YY + G CKFG TCKF HP    + + SA     L +  
Sbjct: 332 KSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAP 391

Query: 467 YPL 475
           YPL
Sbjct: 392 YPL 394



 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 22/52 (42%), Positives = 30/52 (57%)
 Frame = +2

Query: 416 PREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHHPQPSST 571
           P   + +  S+      +P R  + EC YYL+TG CKF S CK+HHPQ  +T
Sbjct: 279 PLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNT 330

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>ZFNL4_ARATH (Q94AD9) Zinc finger CCCH type domain-containing protein ZFN-like 4|
          Length = 404

 Score =  165 bits (417), Expect = 1e-40
 Identities = 70/129 (54%), Positives = 90/129 (69%)
 Frame = +2

Query: 182 EPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQ 361
           E  PYP+R GERDC +Y+RTG C +G +C++NHP    L    A  K E P R+GQP+C+
Sbjct: 40  ELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTH--LPQDVAYYKEELPERIGQPDCE 97

Query: 362 YYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTC 541
           Y+LKTG CK+G TCK+HHP+++   A     NV+G P+RL EK C YYLRTG C+F   C
Sbjct: 98  YFLKTGACKYGPTCKYHHPKDRNG-AQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVAC 156

Query: 542 KFHHPQPSS 568
           KFHHPQP +
Sbjct: 157 KFHHPQPDN 165



 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 42/180 (23%)
 Frame = +2

Query: 197 PERIGERDCSYYMRTGFCRFGVTCKFNHP-----------------ADRKLAVAAARMK- 322
           P R+GE+ C YY+RTG CRFGV CKF+HP                 AD + A     M  
Sbjct: 133 PMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMST 192

Query: 323 -GEYPYRVGQPECQY------------------YLKTGTCKFGATCKFHHPREKAAIAIS 445
            G  P R   P+                     Y+      +    + ++    A++A++
Sbjct: 193 YGTLP-RPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMA 251

Query: 446 AQLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHHP-----QPSSTMVAIRSSICSPGQ 610
             LN  G     ++ EC +++ TG CK+   CK+ HP     QP  +++        PGQ
Sbjct: 252 VALN-RGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQ 310



 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 29/86 (33%), Positives = 46/86 (53%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           QPEC++++ TGTCK+G  CK+ HP  + +    + +N    P R  +  C  +   G CK
Sbjct: 264 QPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCK 323

Query: 527 FASTCKFHHPQPSSTMVAIRSSICSP 604
           F   CKF HP      + + +S+ +P
Sbjct: 324 FGPNCKFDHPMLPYPGLTMATSLPTP 349



 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 200 ERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG-EYPYRVGQPECQYYLKT 376
           E   + +C ++M TG C++G  CK++HP  R      + +     P R GQP C  +   
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSY 319

Query: 377 GTCKFGATCKFHHP 418
           G CKFG  CKF HP
Sbjct: 320 GFCKFGPNCKFDHP 333



 Score = 38.9 bits (89), Expect = 0.013
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 179 MEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHP 283
           + P   P R G+  C  +   GFC+FG  CKF+HP
Sbjct: 299 INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHP 333

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>ZFNL1_ORYSA (Q5NAW2) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 476

 Score =  165 bits (417), Expect = 1e-40
 Identities = 73/137 (53%), Positives = 91/137 (66%), Gaps = 4/137 (2%)
 Frame = +2

Query: 161 GCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG----E 328
           G GG     G  PER GE DC YY+RTG C FG  C++NHP DR         +     +
Sbjct: 45  GGGGDGDAAGRLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALD 104

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           YP R GQP C+YY+KTGTCKFG  CK+HHP++  A+ +   LN  G+P+RL EKEC YY+
Sbjct: 105 YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAV-LPVMLNNSGFPIRLGEKECSYYM 163

Query: 509 RTGQCKFASTCKFHHPQ 559
           +TGQCKF +TCKFHHP+
Sbjct: 164 KTGQCKFGTTCKFHHPE 180



 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 39/76 (51%), Positives = 51/76 (67%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           +P R GQP+CQYY++TG CKFGATCK+HHPRE +A      +N L  PLR   + C YY 
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 363

Query: 509 RTGQCKFASTCKFHHP 556
           + G C++   CK+ HP
Sbjct: 364 QNGYCRYGVACKYDHP 379



 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
 Frame = +2

Query: 323 GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLN---VLGYPLRLNEKE 493
           G  P R G+ +C YYL+TG C FG  C+++HPR++              L YP R  +  
Sbjct: 54  GRLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPI 113

Query: 494 CVYYLRTGQCKFASTCKFHHPQPSSTMVAI 583
           C YY++TG CKF + CK+HHP+    ++ +
Sbjct: 114 CEYYMKTGTCKFGTNCKYHHPKQDGAVLPV 143



 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGE-YPYRVGQPECQYYL 370
           +PER G+ DC YYMRTG C+FG TCK++HP +     +   +     P R G   C YY 
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 363

Query: 371 KTGTCKFGATCKFHHPREKAAIAISA----QLNVLGYPL 475
           + G C++G  CK+ HP      + SA     + +  YP+
Sbjct: 364 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPIAPYPI 402



 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +2

Query: 464 GYPLRLNEKECVYYLRTGQCKFASTCKFHHPQPSSTMVA--IRSSICSPGQSTTSP 625
           G+P R  + +C YY+RTG CKF +TCK+HHP+  S   +  + +S+C P +    P
Sbjct: 303 GFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 358

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>ZFNL3_ARATH (Q6NPN3) Zinc finger CCCH type domain-containing protein ZFN-like 3|
          Length = 465

 Score =  163 bits (413), Expect = 3e-40
 Identities = 73/142 (51%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
 Frame = +2

Query: 146 WQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMK- 322
           W++ L  GG   E   +PER  E DC YY+RTG C +G  C+FNHP +R   +   R + 
Sbjct: 34  WRLGLRGGGGGGET--FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEA 91

Query: 323 GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAA--IAISAQLNVLGYPLRLNEKEC 496
           GE+P R+GQP CQ++++TGTCKFGA+CK+HHPR+           LN +G+PLR  EKEC
Sbjct: 92  GEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKEC 151

Query: 497 VYYLRTGQCKFASTCKFHHPQP 562
            Y++RTGQCKF STC++HHP P
Sbjct: 152 SYFMRTGQCKFGSTCRYHHPVP 173



 Score = 96.7 bits (239), Expect = 5e-20
 Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
 Frame = +2

Query: 167 GGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHP-----ADRKLAVAAARMKGEY 331
           GGL  E G +PER+G+  C ++MRTG C+FG +CK++HP      D    V+   M   +
Sbjct: 85  GGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMG--F 142

Query: 332 PYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQ 451
           P R G+ EC Y+++TG CKFG+TC++HHP      A S Q
Sbjct: 143 PLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQ 182



 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 43/99 (43%), Positives = 57/99 (57%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYL 508
           +P R  QPECQY+++TG CKFG +C+FHHP E A+   S  L+ +G PLR     C ++ 
Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAST-LSHIGLPLRPGAVPCTHFA 355

Query: 509 RTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQSTTSP 625
           + G CKF   CKF H   SS++    S   SP   T  P
Sbjct: 356 QHGICKFGPACKFDHSLGSSSL----SYSPSPSSLTDMP 390



 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 32/92 (34%), Positives = 52/92 (56%)
 Frame = +2

Query: 170 GLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQ 349
           G+S +   +P+R  + +C Y+MRTG C+FG +C+F+HP +     A+       P R G 
Sbjct: 289 GVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLSHIGLPLRPGA 348

Query: 350 PECQYYLKTGTCKFGATCKFHHPREKAAIAIS 445
             C ++ + G CKFG  CKF H    ++++ S
Sbjct: 349 VPCTHFAQHGICKFGPACKFDHSLGSSSLSYS 380

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>ZFNL2_ARATH (Q9SQU4) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 437

 Score =  161 bits (408), Expect = 1e-39
 Identities = 80/164 (48%), Positives = 101/164 (61%), Gaps = 4/164 (2%)
 Frame = +2

Query: 146 WQMTLGCGGLSMEPGP-YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMK 322
           W++ L  GG     G  YPER  E DC YY+RTG C +G  C+FNHP DR   +   R +
Sbjct: 9   WRLGLSGGGGGGGGGESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGE 68

Query: 323 -GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISA--QLNVLGYPLRLNEKE 493
            G  P R+G P CQ++++TGTCKFGA+CK+HHPR+       A   L+ LGYPLR  EKE
Sbjct: 69  AGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKE 128

Query: 494 CVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQSTTSP 625
           C YYLRTGQCKF  TC+F+HP P    +A++     P Q    P
Sbjct: 129 CSYYLRTGQCKFGLTCRFNHPVP----LAVQGPPQQPQQQQPQP 168



 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 35/81 (43%), Positives = 50/81 (61%)
 Frame = +2

Query: 326 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYY 505
           E+P R  QPECQY+++TG CKFG++C++HHP +         L+ +G PLR    +C ++
Sbjct: 278 EFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHF 337

Query: 506 LRTGQCKFASTCKFHHPQPSS 568
            + G CKF   CKF H   SS
Sbjct: 338 AQHGICKFGPACKFDHSMSSS 358



 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
 Frame = +2

Query: 86  SSSPTGLTIGSHYGSTGEATWQMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVT 265
           SSS  GLT  S   +    T+Q        S E   +P+R  + +C Y+MRTG C+FG +
Sbjct: 246 SSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKE---FPQRPDQPECQYFMRTGDCKFGSS 302

Query: 266 CKFNHPADR---KLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHH 415
           C+++HP D    K  +  + +    P R G  +C ++ + G CKFG  CKF H
Sbjct: 303 CRYHHPVDAVPPKTGIVLSSI--GLPLRPGVAQCTHFAQHGICKFGPACKFDH 353



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 197 PERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLA 301
           P R G   C+++ + G C+FG  CKF+H     L+
Sbjct: 326 PLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLS 360

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>ZFNL6_ARATH (Q9STM4) Putative zinc finger CCCH type domain-containing protein|
           ZFN-like 6
          Length = 448

 Score =  144 bits (364), Expect = 2e-34
 Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 3/128 (2%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAA---ARMKGEYPYRVGQPECQY 364
           YP R G  DCS+YMRTG C+FG +CKFNHP  RK  +A     R K +   ++G  +C+Y
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKY 166

Query: 365 YLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCK 544
           Y +TG CK+G TC+F+H   K+ +A + +LN LG PLR  E EC YY+R G CK+ + CK
Sbjct: 167 YFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECK 226

Query: 545 FHHPQPSS 568
           F+HP P++
Sbjct: 227 FNHPDPTT 234



 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 40/95 (42%), Positives = 49/95 (51%)
 Frame = +2

Query: 326 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYY 505
           E+P R  QPEC YY+KTG CKF   CK+HHP+ +        LN  G PLR ++  C YY
Sbjct: 342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYY 401

Query: 506 LRTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQ 610
            R G CKF   C+F H            +I  P Q
Sbjct: 402 SRYGICKFGPACRFDHSVQPPYSTESSQAIVEPPQ 436



 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADR--KLAVAAARMKGEYPYRVGQPECQYY 367
           +PER  + +CSYYM+TG C+F   CK++HP +R  KL   A   KG  P R  Q  C YY
Sbjct: 343 FPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKG-LPLRPDQNICTYY 401

Query: 368 LKTGTCKFGATCKFHH 415
            + G CKFG  C+F H
Sbjct: 402 SRYGICKFGPACRFDH 417



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
 Frame = +2

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKE----- 493
           YP R G  +C +Y++TG+CKFG++CKF+HP         A+   +    ++ EKE     
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPL--------ARKFQIARDNKVREKEDDGGK 158

Query: 494 -----CVYYLRTGQCKFASTCKFHHPQPSSTMVA 580
                C YY RTG CK+  TC+F+H  P S + +
Sbjct: 159 LGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLAS 192

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>ZFNL5_ARATH (Q5RJC5) Zinc finger CCCH type domain-containing protein ZFN-like 5|
          Length = 435

 Score =  140 bits (352), Expect = 4e-33
 Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQP---ECQY 364
           YP R    DCS+YMRTG C++G +CKFNHP  RKL +   R++ E    V  P   EC+Y
Sbjct: 98  YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVR-ERDEDVENPKLMECKY 156

Query: 365 YLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCK 544
           Y +TG CK+G +C+F H +E  + A   +LN LG P+R  EKEC +Y+R G CKF S CK
Sbjct: 157 YFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCK 216

Query: 545 FHHPQPSS 568
           F+HP P++
Sbjct: 217 FNHPDPTA 224



 Score = 86.3 bits (212), Expect = 7e-17
 Identities = 37/79 (46%), Positives = 46/79 (58%)
 Frame = +2

Query: 326 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYY 505
           E+P R  QPEC YYLKTG CKF   CK+HHP+ +     +   N  G PLR ++  C +Y
Sbjct: 330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 389

Query: 506 LRTGQCKFASTCKFHHPQP 562
            R G CKF   C+F H  P
Sbjct: 390 SRYGICKFGPACRFDHSIP 408



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 50/170 (29%), Positives = 71/170 (41%), Gaps = 49/170 (28%)
 Frame = +2

Query: 197 PERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLA-VAAARMKGEY-----PYRVGQPEC 358
           P R GE++C +YMR G C+FG  CKFNHP    +  V +   +G       P    Q   
Sbjct: 192 PIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASS 251

Query: 359 QYYLKT------GTCKF-------------------GATCKFHHPREKAAIAISA----- 448
             +  T      GT  F                   G      +P E++ +A S+     
Sbjct: 252 TSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNN 311

Query: 449 -------------QLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 559
                        Q++V  +P R ++ EC YYL+TG CKF   CK+HHP+
Sbjct: 312 SLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPK 361



 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = +2

Query: 194 YPERIGERDCSYYMRTGFCRFGVTCKFNHPADR--KLAVAAARMKGEYPYRVGQPECQYY 367
           +PER  + +C+YY++TG C+F   CK++HP +R  K A  +   KG  P R  Q  C +Y
Sbjct: 331 FPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKG-LPLRPDQSMCTHY 389

Query: 368 LKTGTCKFGATCKFHH 415
            + G CKFG  C+F H
Sbjct: 390 SRYGICKFGPACRFDH 405

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>ZFN2_ARATH (O48772) Zinc finger CCCH type domain-containing protein ZFN2|
          Length = 453

 Score =  139 bits (349), Expect = 9e-33
 Identities = 61/129 (47%), Positives = 83/129 (64%)
 Frame = +2

Query: 182 EPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQ 361
           +  PYP+R GERDC +++RTG C +G +C++NHP    L       + + P RVGQP+C+
Sbjct: 37  QSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTN-LPQGIIYYRDQLPERVGQPDCE 95

Query: 362 YYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTC 541
               TG CK+G TCK+HHP+++   A     NVLG P+R  EK C YY++TG C+F   C
Sbjct: 96  ----TGACKYGPTCKYHHPKDRNG-AGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVAC 150

Query: 542 KFHHPQPSS 568
           KFHHP P S
Sbjct: 151 KFHHPHPHS 159



 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 26/67 (38%), Positives = 39/67 (58%)
 Frame = +2

Query: 353 ECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFA 532
           EC++++ TGTCK+G  CK+ HP+E+   +    LN +  P R  +  C  +   G CKF 
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFG 325

Query: 533 STCKFHH 553
           + CKF H
Sbjct: 326 ANCKFDH 332



 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
 Frame = +2

Query: 218 DCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG-EYPYRVGQPECQYYLKTGTCKFG 394
           +C ++M TG C++G  CK++HP +R L      +     P R GQP C  +   G CKFG
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFG 325

Query: 395 ATCKFHH-----PREKAAIAISA 448
           A CKF H     P     +A+S+
Sbjct: 326 ANCKFDHSMLLNPYNNTGLAMSS 348



 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 42/163 (25%)
 Frame = +2

Query: 197 PERIGERDCSYYMRTGFCRFGVTCKFNHPADRK--------LAVAAARMKGEYPYRVGQ- 349
           P R GE+ C YYM+TG CRFGV CKF+HP             A+++    G +PY  G  
Sbjct: 127 PMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVG-FPYASGMT 185

Query: 350 -----------------PECQYYL-------------KTGTCKFGATCKFHHPREK--AA 433
                            P+ Q Y+             +       A+   ++ + +  ++
Sbjct: 186 MVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKTQLDSS 245

Query: 434 IAISAQLNVLGYPLRLNEK-ECVYYLRTGQCKFASTCKFHHPQ 559
            + S  + V  +    +E+ EC +++ TG CK+   CK+ HP+
Sbjct: 246 SSASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPK 288



 Score = 37.7 bits (86), Expect = 0.028
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = +2

Query: 179 MEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHP----ADRKLAVAAARMKGEYPY 337
           + P   P R G+  C  +   GFC+FG  CKF+H           +A + +   YPY
Sbjct: 299 LNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPTPYPY 355

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>TTP_RAT (P47973) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11)
          Length = 320

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH-PADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGA 397
           C  Y  +G CR+G  C+F H P + + A    + K E         C  +   G C +G+
Sbjct: 102 CRTYSESGRCRYGAKCQFAHGPGELRQANRHPKYKTEL--------CHKFYLQGRCPYGS 153

Query: 398 TCKF-HHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHHPQPSSTM 574
            C F H+P E  A+         G P  L +      L +G+        F  P  SS  
Sbjct: 154 RCHFIHNPTEDLALP--------GQPHVLRQSISFSGLPSGRRTSPPPPGFSGPSLSSCS 205

Query: 575 VAIRSSICSPGQSTTSP 625
            +  SS   PG    SP
Sbjct: 206 FSPSSSPPPPGDLPLSP 222

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>TTP_MOUSE (P22893) Tristetraproline (TTP) (Zinc finger protein 36) (Zfp-36)|
           (TIS11A protein) (TIS11) (Growth factor-inducible
           nuclear protein NUP475) (TPA-induced sequence 11)
          Length = 319

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 1/136 (0%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  Y  +G CR+G  C+F H       +   R    +P +     C  +   G C +G+ 
Sbjct: 101 CRTYSESGRCRYGAKCQFAH------GLGELRQANRHP-KYKTELCHKFYLQGRCPYGSR 153

Query: 401 CKF-HHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHHPQPSSTMV 577
           C F H+P E  A+         G P  L +      L +G+        F  P  SS   
Sbjct: 154 CHFIHNPTEDLALP--------GQPHVLRQSISFSGLPSGRRSSPPPPGFSGPSLSSCSF 205

Query: 578 AIRSSICSPGQSTTSP 625
           +  SS   PG    SP
Sbjct: 206 SPSSSPPPPGDLPLSP 221

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>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11) (Growth
           factor-inducible nuclear protein NUP475) (G0/G1 switch
           regulatory protein 24)
          Length = 326

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
 Frame = +2

Query: 197 PERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKT 376
           P R     C  +  +G CR+G  C+F H       +   R    +P +     C  +   
Sbjct: 101 PSRYKTELCRTFSESGRCRYGAKCQFAH------GLGELRQANRHP-KYKTELCHKFYLQ 153

Query: 377 GTCKFGATCKF-HHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHH 553
           G C +G+ C F H+P E  A          G+P  L +      L +G+       +   
Sbjct: 154 GRCPYGSRCHFIHNPSEDLAAP--------GHPPVLRQSISFSGLPSGR-------RTSP 198

Query: 554 PQPSSTMVAIRSSICSPGQSTTSPG 628
           P P     ++ SS  SP  S   PG
Sbjct: 199 PPPGLAGPSLSSSSFSPSSSPPPPG 223

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>CPSF4_MOUSE (Q8BQZ5) Cleavage and polyadenylation specificity factor, 30 kDa|
           subunit (CPSF 30 kDa subunit) (Clipper homolog)
           (Clipper/CPSF 30K)
          Length = 211

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 37/143 (25%), Positives = 52/143 (36%), Gaps = 14/143 (9%)
 Frame = +2

Query: 173 LSMEPGPYP--ERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG------- 325
           L  +P P+P  ++ G   C ++++   C  G  C F H +  K  V    ++G       
Sbjct: 23  LGAQPLPFPGMDKSGAAVCEFFLKAA-CGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQ 81

Query: 326 -----EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEK 490
                EY      PEC +Y      KFG  C+  H R                       
Sbjct: 82  CEFLHEYDM-TKMPECYFY-----SKFGPLCRHRHTRRVI-------------------- 115

Query: 491 ECVYYLRTGQCKFASTCKFHHPQ 559
            CV YL  G C    +CKF HP+
Sbjct: 116 -CVNYL-VGFCPEGPSCKFMHPR 136

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>CPSF4_HUMAN (O95639) Cleavage and polyadenylation specificity factor, 30 kDa|
           subunit (CPSF 30 kDa subunit) (NS1 effector
           domain-binding protein 1) (Neb-1) (No arches homolog)
          Length = 269

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 14/141 (9%)
 Frame = +2

Query: 173 LSMEPGPYP--ERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG------- 325
           L  +P P+P  ++ G   C ++++   C  G  C F H +  K  V    ++G       
Sbjct: 23  LGAQPLPFPGMDKSGAAVCEFFLKAA-CGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQ 81

Query: 326 -----EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEK 490
                EY      PEC +Y K G C     C F H   ++ I                 K
Sbjct: 82  CEFLHEYDM-TKMPECYFYSKFGECS-NKECPFLHIDPESKI-----------------K 122

Query: 491 ECVYYLRTGQCKFASTCKFHH 553
           +C +Y R G CK    C+  H
Sbjct: 123 DCPWYDR-GFCKHGPLCRHRH 142



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +2

Query: 215 RDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFG 394
           +DC +Y R GFC+ G  C+  H   R++                   C  YL  G C  G
Sbjct: 122 KDCPWYDR-GFCKHGPLCRHRHT--RRVI------------------CVNYL-VGFCPEG 159

Query: 395 ATCKFHHPREKAAIAISAQ 451
            +CKF HPR +  +  + Q
Sbjct: 160 PSCKFMHPRFELPMGTTEQ 178

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>SCP3_SCHPO (P41000) Protein scp3|
          Length = 583

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 27/91 (29%), Positives = 34/91 (37%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+++ + GTC  G  C F H  E A                  EK    Y + G CKF S
Sbjct: 41  CKFF-RQGTCTSGKNCIFSHDLELAT-----------------EKTICKYFQKGNCKFGS 82

Query: 536 TCKFHHPQPSSTMVAIRSSICSPGQSTTSPG 628
            C   H  P    V  R+       STT+ G
Sbjct: 83  KCALEHVLPDGRKVKTRAF----APSTTAMG 109



 Score = 35.8 bits (81), Expect = 0.11
 Identities = 23/75 (30%), Positives = 33/75 (44%)
 Frame = +2

Query: 191 PYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYL 370
           P P+ +    C ++ R G C  G  C F+H  D +LA               +  C+Y+ 
Sbjct: 31  PSPKSLQHVPCKFF-RQGTCTSGKNCIFSH--DLELATE-------------KTICKYFQ 74

Query: 371 KTGTCKFGATCKFHH 415
           K G CKFG+ C   H
Sbjct: 75  K-GNCKFGSKCALEH 88

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>CS007_MOUSE (Q6ZPZ3) Zinc finger CCCH-type domain-containing protein C19orf7|
           homolog
          Length = 1304

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
 Frame = +2

Query: 182 EPGPYPERIGERDCSYYMRTGFCRFGVTCKFNH----PADRKLA----VAAARMKGEYPY 337
           +P    ++ G+  C Y++  G C +G  C F+H    P  R+L               PY
Sbjct: 382 KPHQQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPY 440

Query: 338 RVGQPECQYYLKTGTCKFGATCKFHH 415
             G   C+ Y  TG C  G  C F H
Sbjct: 441 MHGDFPCKLYHTTGNCINGDDCMFSH 466



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
 Frame = +2

Query: 344 GQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGY-------PLRLNEKECVY 502
           G+  C+Y+++ G C +G  C F H  E        +  + G+       P    +  C  
Sbjct: 391 GKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKL 449

Query: 503 YLRTGQCKFASTCKFHH 553
           Y  TG C     C F H
Sbjct: 450 YHTTGNCINGDDCMFSH 466

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>ZC3H3_HUMAN (Q8IXZ2) Zinc finger CCCH-type domain-containing protein 3|
          Length = 948

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
 Frame = +2

Query: 221  CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG---------EYPYRVGQ---PECQY 364
            C YY R G C  G  C + H  + K+AV    ++G          + + V +   P C Y
Sbjct: 673  CMYYNRFGRCNRGERCPYIHDPE-KVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSY 731

Query: 365  YLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGY-PLRLNEKE-----CVYYLRTGQCK 526
            +LK G C   + C + H        + +   + GY PL    K+     C  + R G C 
Sbjct: 732  FLK-GICS-NSNCPYSHVYVSRKAEVCSDF-LKGYCPLGAKCKKKHTLLCPDFARRGACP 788

Query: 527  FASTCK-FHHPQPSSTMVAIRSSICSPGQST 616
              + C+  H  Q   +  A  S    P  +T
Sbjct: 789  RGAQCQLLHRTQKRHSRRAATSPAPGPSDAT 819

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>MKRN2_MOUSE (Q9ERV1) Makorin-2|
          Length = 416

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C Y+M  G CR G  C F+H            +    P  +    C+YY K G C +GA 
Sbjct: 8   CRYFMH-GVCREGSQCLFSHD-----------LANSKPSTI----CKYYQK-GYCAYGAR 50

Query: 401 CKFHHPREKAA 433
           C++ H +  AA
Sbjct: 51  CRYDHTKPPAA 61



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y++  G C+ G+ C F H      +A S    +           C YY + G C 
Sbjct: 5   QVTCRYFMH-GVCREGSQCLFSHD-----LANSKPSTI-----------CKYYQK-GYCA 46

Query: 527 FASTCKFHHPQP 562
           + + C++ H +P
Sbjct: 47  YGARCRYDHTKP 58

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>MKRN2_HUMAN (Q9H000) Makorin-2 (RING finger protein 62)|
          Length = 416

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C Y+M  G CR G  C F+H            +    P  +    C+YY K G C +G  
Sbjct: 8   CRYFMH-GVCREGSQCLFSHD-----------LANSKPSTI----CKYYQK-GYCAYGTR 50

Query: 401 CKFHHPREKAA 433
           C++ H R  AA
Sbjct: 51  CRYDHTRPSAA 61



 Score = 33.9 bits (76), Expect = 0.41
 Identities = 24/93 (25%), Positives = 41/93 (44%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y++  G C+ G+ C F H      +A S    +           C YY + G C 
Sbjct: 5   QITCRYFMH-GVCREGSQCLFSHD-----LANSKPSTI-----------CKYYQK-GYCA 46

Query: 527 FASTCKFHHPQPSSTMVAIRSSICSPGQSTTSP 625
           + + C++ H +PS+   A   ++ +   S  SP
Sbjct: 47  YGTRCRYDHTRPSA---AAGGAVGTMAHSVPSP 76

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>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1177

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
 Frame = +2

Query: 200 ERIGERDCSYYMRTGFCRFGVTCKFNHPA--DRKLAVAAARMKG------EYPYRVGQPE 355
           E  G++ C Y++  G C  G  CKFNH A  ++K  V    ++G         Y   +  
Sbjct: 269 EHKGKQICKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFP 327

Query: 356 CQYYLKTGTCKFGATCKFHH 415
           C++Y     C  G  CKF H
Sbjct: 328 CKFYHSGAKCYQGDKCKFSH 347



 Score = 33.9 bits (76), Expect = 0.41
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
 Frame = +2

Query: 344 GQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLR-------LNEKECVY 502
           G+  C+Y+L+ G C  G  CKF+H  E        +  + GY  +        +E  C +
Sbjct: 272 GKQICKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKF 330

Query: 503 YLRTGQCKFASTCKFHH 553
           Y    +C     CKF H
Sbjct: 331 YHSGAKCYQGDKCKFSH 347

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>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 38.1 bits (87), Expect = 0.022
 Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
 Frame = +2

Query: 182 EPGPYPERIGERDCSYYMRTGFCRFGVTCKFNH----PADRKLA----VAAARMKGEYPY 337
           +P    ++ G+  C Y++  G C +G  C F+H    P  R+L               PY
Sbjct: 383 KPHQQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPY 441

Query: 338 RVGQPECQYYLKTGTCKFGATCKFHH 415
             G   C+ Y  TG C  G  C F H
Sbjct: 442 MHGDFPCKLYHTTGNCINGDDCMFSH 467



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
 Frame = +2

Query: 344 GQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGY-------PLRLNEKECVY 502
           G+  C+Y+++ G C +G  C F H  E        +  + G+       P    +  C  
Sbjct: 392 GKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKL 450

Query: 503 YLRTGQCKFASTCKFHH 553
           Y  TG C     C F H
Sbjct: 451 YHTTGNCINGDDCMFSH 467

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>ZC3H3_MOUSE (Q8CHP0) Zinc finger CCCH-type domain-containing protein 3|
          Length = 950

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
 Frame = +2

Query: 221  CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKG---------EYPYRVGQ---PECQY 364
            C YY R G C  G  C + H  + K+AV    ++G          + + V +   P C Y
Sbjct: 668  CMYYNRFGRCNRGECCPYIHDPE-KVAVCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSY 726

Query: 365  YLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGY-PLRLNEKE-----CVYYLRTGQCK 526
            +LK G C   + C + H        + +   + GY PL    K+     C  + R G C 
Sbjct: 727  FLK-GICS-NSNCPYSHVYVSRKAEVCSDF-LKGYCPLGAKCKKKHTLLCPDFARRGICP 783

Query: 527  FASTCKFHH 553
              S C+  H
Sbjct: 784  RGSQCQLLH 792



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
 Frame = +2

Query: 233 MRTGFCRFGVTCK---FNHPADRKLAVAA-ARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           +RTG      TC     +    R LA+   A+ K E      +  C YY + G C  G  
Sbjct: 627 LRTGRLDPATTCSRSLASRAIQRSLAIIRQAKQKKEKK----REYCMYYNRFGRCNRGEC 682

Query: 401 CKFHHPREKAAI 436
           C + H  EK A+
Sbjct: 683 CPYIHDPEKVAV 694

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>TTP_BOVIN (P53781) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36) (TIS11A protein) (TIS11)
          Length = 324

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +  +G CR+G  C+F H       +   R    +P +     C  +   G C +G+ 
Sbjct: 107 CRTFSESGRCRYGAKCQFAH------GLGELRQASRHP-KYKTELCHKFYLQGRCPYGSR 159

Query: 401 CKF-HHPREKAA 433
           C F H+P E  A
Sbjct: 160 CHFIHNPSEDLA 171



 Score = 35.4 bits (80), Expect = 0.14
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+ + ++G C++GA C+F H        +        +P    E    +YL+ G+C + S
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-------GLGELRQASRHPKYKTELCHKFYLQ-GRCPYGS 158

Query: 536 TCKFHHPQPSSTMVA 580
            C F H  PS  + A
Sbjct: 159 RCHFIH-NPSEDLAA 172

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>TTP_SHEEP (Q6S9E0) Tristetraproline (TTP) (Zinc finger protein 36 homolog)|
           (Zfp-36)
          Length = 325

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +  +G CR+G  C+F H       +   R    +P +     C  +   G C +G+ 
Sbjct: 107 CRTFSESGRCRYGAKCQFAH------GLGELRQPSRHP-KYKTELCHKFYLQGRCPYGSR 159

Query: 401 CKF-HHPREKAA 433
           C F H+P E  A
Sbjct: 160 CHFIHNPSEDLA 171



 Score = 35.0 bits (79), Expect = 0.18
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLR---LNEKECVYYLRTGQCK 526
           C+ + ++G C++GA C+F H            L  L  P R      + C  +   G+C 
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155

Query: 527 FASTCKFHHPQPSSTMVA 580
           + S C F H  PS  + A
Sbjct: 156 YGSRCHFIH-NPSEDLAA 172

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>ZC3H6_HUMAN (P61129) Zinc finger CCCH-type domain-containing protein 6|
          Length = 1189

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 29/118 (24%), Positives = 43/118 (36%)
 Frame = +2

Query: 200 ERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTG 379
           E  G++ C Y++  G C  G  CKF+H A+ +                 +  C++YL+ G
Sbjct: 271 EHKGKQICKYFLE-GRCIKGDQCKFDHDAELEKR---------------KEICKFYLQ-G 313

Query: 380 TCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFASTCKFHH 553
            C  G  C + H                      NE  C +Y    +C     CKF H
Sbjct: 314 YCTKGENCIYMH----------------------NEFPCKFYHSGAKCYQGDNCKFSH 349

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>YQC1_SCHPO (O74463) Hypothetical protein C1739.01 in chromosome III|
          Length = 547

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = +2

Query: 230 YMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKF 409
           + R G C  G  C F+H  + +                 +P C+Y+LK G CKFG  C  
Sbjct: 49  FFRNGTCTAGENCPFSHSLETE-----------------RPICKYFLK-GNCKFGPKCAL 90

Query: 410 HH 415
            H
Sbjct: 91  SH 92



 Score = 34.7 bits (78), Expect = 0.24
 Identities = 20/72 (27%), Positives = 27/72 (37%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+++ + GTC  G  C F H                   L      C Y+L+ G CKF  
Sbjct: 47  CKFF-RNGTCTAGENCPFSH------------------SLETERPICKYFLK-GNCKFGP 86

Query: 536 TCKFHHPQPSST 571
            C   H  P +T
Sbjct: 87  KCALSHALPGNT 98

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>CTH2_YEAST (P47977) Zinc finger protein CTH2 (YTIS11 protein)|
          Length = 285

 Score = 37.0 bits (84), Expect = 0.048
 Identities = 19/88 (21%), Positives = 36/88 (40%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+ +   G+C +G+ C+F H   +  +  S +            K CV + + G C +  
Sbjct: 175 CESFTLKGSCPYGSKCQFAHGLGELKVKKSCK--------NFRTKPCVNWEKLGYCPYGR 226

Query: 536 TCKFHHPQPSSTMVAIRSSICSPGQSTT 619
            C F H   +   V +++       ST+
Sbjct: 227 RCCFKHGDDNDIAVYVKAGTYCNVSSTS 254

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>ZC3H8_HUMAN (Q8N5P1) Zinc finger CCCH-type domain-containing protein 8|
          Length = 291

 Score = 36.6 bits (83), Expect = 0.063
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
 Frame = +2

Query: 281 PADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNV 460
           P +++  ++ A +      R G+  C+Y+L+   C  G  CKF H  E        +  V
Sbjct: 172 PKEKQQHLSQAFINQHTVERKGKQICKYFLER-KCIKGDQCKFDHDAEIEKKKEMCKFYV 230

Query: 461 LGYPLR-------LNEKECVYYLRTGQCKFASTCKFHH 553
            GY  R        NE  C +Y    +C     CKF H
Sbjct: 231 QGYCTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSH 268

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>MKRN1_HUMAN (Q9UHC7) Makorin-1 (RING finger protein 61)|
          Length = 482

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 13/162 (8%)
 Frame = +2

Query: 29  GTSDVMXXXXXXXXXXXXXSSSPTGLTIGSHYGSTGEATWQMTLGCGGLSMEPGPYPERI 208
           GT+                S +P         G+ G        G GG     G + +++
Sbjct: 8   GTTATTSGAGAAAATAAAASPTPIPTVTAPSLGAGG--------GGGGSDGSGGGWTKQV 59

Query: 209 GERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCK 388
               C Y+M  G C+ G  C+++H               + PY V    C+Y+ + G C 
Sbjct: 60  ---TCRYFMH-GVCKEGDNCRYSHDL------------SDSPYSV---VCKYF-QRGYCI 99

Query: 389 FGATCKFHHPR-------------EKAAIAISAQLNVLGYPL 475
           +G  C++ H +              K+++A S+ L+ +  PL
Sbjct: 100 YGDRCRYEHSKPLKQEEATATELTTKSSLAASSSLSSIVGPL 141



 Score = 33.5 bits (75), Expect = 0.53
 Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y++  G CK G  C++ H    +  ++                 C Y+ R G C 
Sbjct: 58  QVTCRYFMH-GVCKEGDNCRYSHDLSDSPYSVV----------------CKYFQR-GYCI 99

Query: 527 FASTCKFHHPQP------SSTMVAIRSSICSPGQSTTSPG 628
           +   C++ H +P      ++T +  +SS+ +    ++  G
Sbjct: 100 YGDRCRYEHSKPLKQEEATATELTTKSSLAASSSLSSIVG 139

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>CTH1_YEAST (P47976) Zinc finger protein CTH1|
          Length = 325

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNE---KECVYYLRTGQCK 526
           C+ +   G CK+G  C+F H            LN L +  + N    K C+ + + G C 
Sbjct: 210 CESFTIKGYCKYGNKCQFAH-----------GLNELKFKKKSNNYRTKPCINWSKLGYCP 258

Query: 527 FASTCKFHH 553
           +   C F H
Sbjct: 259 YGKRCCFKH 267



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 19/69 (27%), Positives = 28/69 (40%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +   G+C++G  C+F H  +          K    YR     C  + K G C +G  
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNE-----LKFKKKSNNYRT--KPCINWSKLGYCPYGKR 262

Query: 401 CKFHHPREK 427
           C F H  +K
Sbjct: 263 CCFKHGDDK 271

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>TIS1_DROME (P47980) Protein TIS11 (dTIS11)|
          Length = 436

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAV-AAARMKGEYPYRVGQPECQYYLKTGTCKFGA 397
           C  +   G C++G  C+F H +     V    + K EY        C+ +   G C +G 
Sbjct: 141 CRPFEEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEY--------CRTFHSVGFCPYGP 192

Query: 398 TCKFHHPREKAAIAISAQ 451
            C F H  ++A    +AQ
Sbjct: 193 RCHFVHNADEARAQQAAQ 210



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+ + + G CK+G  C+F H   +         NV  +P +   + C  +   G C +  
Sbjct: 141 CRPFEEAGECKYGEKCQFAHGSHELR-------NVHRHP-KYKTEYCRTFHSVGFCPYGP 192

Query: 536 TCKFHH----PQPSSTMVAIRSSICSPGQSTTS 622
            C F H     +      A +SS  S  QS  S
Sbjct: 193 RCHFVHNADEARAQQAAQAAKSSTQSQSQSQQS 225

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>ZN183_BOVIN (Q67ER4) Zinc finger protein 183|
          Length = 343

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
 Frame = +2

Query: 269 KFNHPADRKLAVAAARMKGEYPYRVG-----------QPE-CQYYLKTGTCKFGATCKFH 412
           KF  P D  +  A++ M  + P R             QP+ C+ Y +TG C FG +CKF 
Sbjct: 161 KFMKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFL 220

Query: 413 HPR 421
           H R
Sbjct: 221 HDR 223



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 9/65 (13%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH---------PADRKLAVAAARMKGEYPYRVGQPECQYYLK 373
           C  Y  TGFC FG +CKF H           +R+L      +  +  Y VG  E +   K
Sbjct: 202 CKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVYEDENYEVGSDEEEIPFK 261

Query: 374 TGTCK 388
              C+
Sbjct: 262 CFICR 266

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>DHX57_MOUSE (Q6P5D3) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1388

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C++YLK G CKFG+ CKF H      +   A+ NV      L+  +   ++   Q +F+ 
Sbjct: 305 CKFYLK-GNCKFGSKCKFKHEVPPHQMIGRAERNV--NDPHLDADDDTTFMYELQIRFSK 361

Query: 536 TCKFHHPQP 562
             K+ +  P
Sbjct: 362 DHKYPYQAP 370



 Score = 33.9 bits (76), Expect = 0.41
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 494 CVYYLRTGQCKFASTCKFHHPQPSSTMV 577
           C +YL+ G CKF S CKF H  P   M+
Sbjct: 305 CKFYLK-GNCKFGSKCKFKHEVPPHQMI 331

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>MKRN1_MACEU (Q9TT91) Makorin-1|
          Length = 478

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y++  G CK G  C++ H    +  A+                 C YY R G C 
Sbjct: 54  QVTCRYFMH-GVCKKGNNCRYSHDLSTSQSAMV----------------CRYYQR-GCCA 95

Query: 527 FASTCKFHHPQP 562
           +   C++ H +P
Sbjct: 96  YGDRCRYEHTKP 107



 Score = 33.1 bits (74), Expect = 0.70
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C Y+M  G C+ G  C+++H     L+ + + M            C+YY + G C +G  
Sbjct: 57  CRYFMH-GVCKKGNNCRYSH----DLSTSQSAM-----------VCRYY-QRGCCAYGDR 99

Query: 401 CKFHHPR 421
           C++ H +
Sbjct: 100 CRYEHTK 106

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>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)|
          Length = 343

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 12/63 (19%)
 Frame = +2

Query: 269 KFNHPADRKLAVAAARMKGEYPYRVG-----------QPE-CQYYLKTGTCKFGATCKFH 412
           K+  P D  +  A++ M  + P R             QP+ C+ Y +TG C FG +CKF 
Sbjct: 161 KYMKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFL 220

Query: 413 HPR 421
           H R
Sbjct: 221 HDR 223



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  Y  TGFC FG +CKF H
Sbjct: 202 CKDYKETGFCGFGDSCKFLH 221

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>MKRN1_MOUSE (Q9QXP6) Makorin-1|
          Length = 481

 Score = 33.9 bits (76), Expect = 0.41
 Identities = 22/87 (25%), Positives = 39/87 (44%)
 Frame = +2

Query: 161 GCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYR 340
           G GG     G + +++    C Y+M  G C+ G  C+++H               + PY 
Sbjct: 44  GGGGSDGSGGGWTKQV---TCRYFMH-GVCKEGDNCRYSHDL------------SDSPYG 87

Query: 341 VGQPECQYYLKTGTCKFGATCKFHHPR 421
           V    C+Y+ + G C +G  C++ H +
Sbjct: 88  V---VCKYF-QRGYCVYGDRCRYEHSK 110



 Score = 32.7 bits (73), Expect = 0.91
 Identities = 17/72 (23%), Positives = 29/72 (40%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y++  G CK G  C++ H    +   +                 C Y+ R G C 
Sbjct: 58  QVTCRYFMH-GVCKEGDNCRYSHDLSDSPYGVV----------------CKYFQR-GYCV 99

Query: 527 FASTCKFHHPQP 562
           +   C++ H +P
Sbjct: 100 YGDRCRYEHSKP 111

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>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)|
          Length = 322

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHP-ADRKLAVAAARMKGEYPYRVGQPE 355
           C  Y  TGFC FG +CKF H  +D KL     R   E  Y + + E
Sbjct: 196 CKDYKETGFCGFGDSCKFLHDRSDYKLGWEIERELEEGRYCICEDE 241



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPR 421
           QP+ C+ Y +TG C FG +CKF H R
Sbjct: 192 QPDICKDYKETGFCGFGDSCKFLHDR 217

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>MEX5_CAEEL (Q9XUB2) Zinc finger protein mex-5|
          Length = 468

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
 Frame = +2

Query: 248 CRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGT--CKFGATCKFHHPR 421
           C  G  CKF H      A  A        Y+     C+ + + GT  C +G  C+F HP 
Sbjct: 286 CDMGARCKFAHGLKELRATDAPARYPNNKYKTKL--CKNFARGGTGFCPYGLRCEFVHPT 343

Query: 422 EK 427
           +K
Sbjct: 344 DK 345



 Score = 33.1 bits (74), Expect = 0.70
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +2

Query: 185 PGPYPE-RIGERDCSYYMR--TGFCRFGVTCKFNHPADRK 295
           P  YP  +   + C  + R  TGFC +G+ C+F HP D++
Sbjct: 307 PARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVHPTDKE 346



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = +2

Query: 383 CKFGATCKFHHP-REKAAIAISAQLNVLGYPLRLNEKECVYYLR--TGQCKFASTCKFHH 553
           C  GA CKF H  +E  A    A+     Y  +L    C  + R  TG C +   C+F H
Sbjct: 286 CDMGARCKFAHGLKELRATDAPARYPNNKYKTKL----CKNFARGGTGFCPYGLRCEFVH 341

Query: 554 P 556
           P
Sbjct: 342 P 342

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>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24|
          Length = 355

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPR 421
           QP+ C+ Y +TG C FG TCKF H R
Sbjct: 199 QPDVCKDYKETGYCGFGDTCKFLHDR 224



 Score = 33.5 bits (75), Expect = 0.53
 Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
 Frame = +2

Query: 98  TGLTIGS---HYGSTGEATWQMTL--GCGGLSMEPGPYPERIGERD----------CSYY 232
           TG+T  S   + G+   A++  T   GC       GP  +    R           C  Y
Sbjct: 147 TGVTSNSDGLYRGAKSYASFTRTRDDGCSSKMRSRGPIRQTTTVRTTSLIDYQPDVCKDY 206

Query: 233 MRTGFCRFGVTCKFNHPADRKLA 301
             TG+C FG TCKF H     LA
Sbjct: 207 KETGYCGFGDTCKFLHDRSDYLA 229

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>CWC24_ASHGO (Q752S4) Pre-mRNA-splicing factor CWC24|
          Length = 250

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQ 361
           C  Y +TGFC +G +CKF H  D     A  R+  E  ++VGQ E +
Sbjct: 107 CKDYRQTGFCGYGDSCKFLHSRDD--FRAGWRLNEE--WKVGQTEAR 149



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPRE 424
           QP+ C+ Y +TG C +G +CKF H R+
Sbjct: 103 QPDVCKDYRQTGFCGYGDSCKFLHSRD 129

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>MKRN2_BRARE (Q9DFG8) Makorin-2|
          Length = 414

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y+L  G C+ G+ C F H      +  S    +           C YY R G C 
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHD-----LTTSKPSTI-----------CKYYQR-GACA 46

Query: 527 FASTCKFHHPQP---SSTMVAIRSSICSPGQSTTSPG 628
           +   C++ H +P    S   A  S+  S     ++PG
Sbjct: 47  YGDRCRYDHIKPPGRGSGAPADHSNRSSSSAGASAPG 83



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C Y++  G CR G  C F+H            +    P  +    C+YY + G C +G  
Sbjct: 8   CRYFLH-GVCREGSRCLFSHD-----------LTTSKPSTI----CKYY-QRGACAYGDR 50

Query: 401 CKFHH 415
           C++ H
Sbjct: 51  CRYDH 55

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>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24|
          Length = 232

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPREK 427
           QP+ C+ +L+TG C +G TCKF H R++
Sbjct: 114 QPDVCKDFLQTGYCGYGDTCKFLHIRDE 141



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPAD 289
           C  +++TG+C +G TCKF H  D
Sbjct: 118 CKDFLQTGYCGYGDTCKFLHIRD 140

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>U2AFL_MOUSE (Q64707) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1) (SP2)
          Length = 428

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHH--PREKAAIAISAQLNVLG 466
           +P C +Y KTG C+FG  C   H  P     + + +     G
Sbjct: 160 RPSCPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSMFTTFG 201



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 494 CVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSI 595
           C +Y +TG C+F + C   H  P+S+   +  S+
Sbjct: 163 CPFYNKTGACRFGNRCSRKHDFPTSSPTLLVKSM 196

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>CD244_MOUSE (Q07763) Natural killer cell receptor 2B4 precursor (NKR2B4) (NK|
           cell type I receptor protein 2B4) (CD244 antigen) (Non
           MHC restricted killing associated)
          Length = 397

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 25/95 (26%), Positives = 37/95 (38%)
 Frame = -2

Query: 464 LEHSTVQRLQLQPSLWDDGTCMLLQTCMSQSSGNIDTQVDQLCKDTRLSSLQQQQPASCL 285
           L+H     L+ Q   W +GTC L  +C+     N+      L + + L S Q+       
Sbjct: 128 LDHVETPNLKAQWKPWTNGTCQLFLSCLVTKDDNVSY---ALYRGSTLISNQRNSTHWEN 184

Query: 284 QGD*ICRLPQTYKIQSSYSNCNHALLYAQGMDQVP 180
           Q D       T  + +  S  NH L +  G   VP
Sbjct: 185 QIDASSLHTYTCNVSNRASWANHTLNFTHGCQSVP 219

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHH---PREK 427
           + +C+ +LKTG C +G TC+F H   PR K
Sbjct: 39  ETQCRNWLKTGNCLYGNTCRFVHGPSPRGK 68



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 485 EKECVYYLRTGQCKFASTCKF-HHPQP 562
           E +C  +L+TG C + +TC+F H P P
Sbjct: 39  ETQCRNWLKTGNCLYGNTCRFVHGPSP 65



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 GPYPERIGERDCSYYMRTGFCRFGVTCKFNH 280
           GP      E  C  +++TG C +G TC+F H
Sbjct: 31  GPSTGSTAETQCRNWLKTGNCLYGNTCRFVH 61

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>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24|
          Length = 405

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAA 433
           C+ Y +TG C FG  CKF H RE  A
Sbjct: 227 CKDYKQTGFCGFGDNCKFLHAREDYA 252



 Score = 32.0 bits (71), Expect = 1.6
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  Y +TGFC FG  CKF H
Sbjct: 227 CKDYKQTGFCGFGDNCKFLH 246

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>MKRN2_SERQU (Q9DD48) Makorin-2 (Zinc finger protein YGHLC3HC4)|
          Length = 423

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y+L  G C+ G+ C F H    +  +                  C +Y R G C 
Sbjct: 5   QVTCRYFLH-GVCREGSRCLFSHDLNNSKPSTI----------------CKFYQR-GVCA 46

Query: 527 FASTCKFHHPQPSS 568
           +   C++ H +PSS
Sbjct: 47  YGERCRYDHIKPSS 60



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C Y++  G CR G  C F+H            +    P  +    C++Y + G C +G  
Sbjct: 8   CRYFLH-GVCREGSRCLFSHD-----------LNNSKPSTI----CKFY-QRGVCAYGER 50

Query: 401 CKFHH 415
           C++ H
Sbjct: 51  CRYDH 55

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>ZFS1_SCHPO (P47979) Zinc-finger protein zfs1|
          Length = 404

 Score = 33.1 bits (74), Expect = 0.70
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +  +G CR+G  C+F H  +++L       K +         C+ ++  G C +G  
Sbjct: 332 CKNWQISGTCRYGSKCQFAH-GNQELKEPPRHPKYK------SERCRSFMMYGYCPYGLR 384

Query: 401 CKFHHPREKA 430
           C F H    A
Sbjct: 385 CCFLHDESNA 394



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 15/71 (21%), Positives = 32/71 (45%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+ +  +GTC++G+ C+F H  +        +L       +   + C  ++  G C +  
Sbjct: 332 CKNWQISGTCRYGSKCQFAHGNQ--------ELKEPPRHPKYKSERCRSFMMYGYCPYGL 383

Query: 536 TCKFHHPQPSS 568
            C F H + ++
Sbjct: 384 RCCFLHDESNA 394



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 182 EPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMK 322
           EP  +P+   ER C  +M  G+C +G+ C F H  D   A  +A +K
Sbjct: 358 EPPRHPKYKSER-CRSFMMYGYCPYGLRCCFLH--DESNAQKSATIK 401

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>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5|
           protein 24) (Cell cycle control protein cwf24)
          Length = 533

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPRE 424
           QP+ C+ Y  TG C +G TCKF H RE
Sbjct: 186 QPDVCKDYKLTGYCGYGDTCKFLHMRE 212



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  Y  TG+C +G TCKF H
Sbjct: 190 CKDYKLTGYCGYGDTCKFLH 209

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>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24|
          Length = 229

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPREKAA 433
           QP+ C+ + KTG C +G +CKF H R+  A
Sbjct: 112 QPDICKDFQKTGYCGYGDSCKFLHSRDDVA 141



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPAD 289
           C  + +TG+C +G +CKF H  D
Sbjct: 116 CKDFQKTGYCGYGDSCKFLHSRD 138

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>TISB_HUMAN (Q07352) Butyrate response factor 1 (TIS11B protein) (EGF-response|
           factor 1) (ERF-1)
          Length = 338

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +   G C++G  C+F H       +   R    +P +     C+ +   G C +G  
Sbjct: 120 CRPFEENGACKYGDKCQFAH------GIHELRSLTRHP-KYKTELCRTFHTIGFCPYGPR 172

Query: 401 CKF-HHPREKAAIAISAQLN 457
           C F H+  E+ A+A +  L+
Sbjct: 173 CHFIHNAEERRALAGARDLS 192

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>LEE1_YEAST (Q02799) Zinc finger protein LEE1|
          Length = 301

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 19/70 (27%), Positives = 31/70 (44%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+++ K G C+ G++C F H  +  + A              N   C Y+ + G CKF +
Sbjct: 93  CKFF-KMGNCQAGSSCPFSHSPDIISSA--------------NNLPCKYFAK-GNCKFGN 136

Query: 536 TCKFHHPQPS 565
            C   H  P+
Sbjct: 137 KCVNAHVLPN 146



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +2

Query: 230 YMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKF 409
           + + G C+ G +C F+H  D    +++A              C+Y+ K G CKFG  C  
Sbjct: 95  FFKMGNCQAGSSCPFSHSPD---IISSA----------NNLPCKYFAK-GNCKFGNKCVN 140

Query: 410 HH 415
            H
Sbjct: 141 AH 142

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>DHX57_HUMAN (Q6P158) Putative ATP-dependent RNA helicase DHX57 (EC 3.6.1.-)|
           (DEAH box protein 57)
          Length = 1386

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHH 415
           C++YLK G CKFG+ C+F H
Sbjct: 305 CKFYLK-GNCKFGSKCRFKH 323



 Score = 32.3 bits (72), Expect = 1.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 494 CVYYLRTGQCKFASTCKFHHPQPSSTMV 577
           C +YL+ G CKF S C+F H  P + +V
Sbjct: 305 CKFYLK-GNCKFGSKCRFKHEVPPNQIV 331

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>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog|
          Length = 384

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  Y  TGFC FG +CKF H
Sbjct: 181 CKDYKETGFCTFGDSCKFVH 200



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPR 421
           C+ Y +TG C FG +CKF H R
Sbjct: 181 CKDYKETGFCTFGDSCKFVHDR 202

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>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24|
          Length = 332

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPRE 424
           C+ Y  TG C FG +CKF H RE
Sbjct: 168 CKDYKLTGYCGFGDSCKFSHMRE 190



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  Y  TG+C FG +CKF+H
Sbjct: 168 CKDYKLTGYCGFGDSCKFSH 187

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>TISB_RAT (P17431) Butyrate response factor 1 (TIS11B protein) (EGF-inducible|
           protein CMG1)
          Length = 338

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +   G C++G  C+F H       +   R    +P +     C+ +   G C +G  
Sbjct: 120 CRPFEENGACKYGDKCQFAH------GIHELRSLTRHP-KYKTELCRTFHTIGFCPYGPR 172

Query: 401 CKF-HHPREKAAIA 439
           C F H+  E+ A+A
Sbjct: 173 CHFIHNAEERRALA 186



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAAR 316
           C  +   GFC +G  C F H A+ + A+A  R
Sbjct: 158 CRTFHTIGFCPYGPRCHFIHNAEERRALAGGR 189

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>TISB_MOUSE (P23950) Butyrate response factor 1 (TIS11B protein)|
          Length = 338

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C  +   G C++G  C+F H       +   R    +P +     C+ +   G C +G  
Sbjct: 120 CRPFEENGACKYGDKCQFAH------GIHELRSLTRHP-KYKTELCRTFHTIGFCPYGPR 172

Query: 401 CKF-HHPREKAAIA 439
           C F H+  E+ A+A
Sbjct: 173 CHFIHNAEERRALA 186



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAAR 316
           C  +   GFC +G  C F H A+ + A+A  R
Sbjct: 158 CRTFHTIGFCPYGPRCHFIHNAEERRALAGGR 189

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>U2AFM_MOUSE (Q62377) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2)
          Length = 462

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 167 GGLSMEPGPYPE-RIGERD---CSYYMRTGFCRFGVTCKFNH 280
           GG    P P  + R+ E+D   C +Y +TG CRFG  C   H
Sbjct: 154 GGTWQNPEPPMDIRVLEKDRANCPFYSKTGACRFGDRCSRKH 195



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATC--KFHHPREKAAIAISAQLNVLG 466
           C +Y KTG C+FG  C  K + P     + I       G
Sbjct: 176 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFG 214



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 473 LRLNEKE---CVYYLRTGQCKFASTCKFHHPQPSST 571
           +R+ EK+   C +Y +TG C+F   C   H  P+S+
Sbjct: 166 IRVLEKDRANCPFYSKTGACRFGDRCSRKHNFPTSS 201

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>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +2

Query: 143 TWQMTLGCGGLSMEPGPYPERIGERD---CSYYMRTGFCRFGVTCKFNH 280
           TWQ        + EP P   R+ E+D   C +Y +TG CRFG  C   H
Sbjct: 152 TWQ--------NPEP-PVDFRVMEKDRANCPFYSKTGACRFGDRCSRKH 191



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATC--KFHHPREKAAIAISAQLNVLG 466
           C +Y KTG C+FG  C  K + P     + I +     G
Sbjct: 172 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +2

Query: 476 RLNEKE---CVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSI 595
           R+ EK+   C +Y +TG C+F   C   H  P+S+   +  S+
Sbjct: 163 RVMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSM 205

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>U2AFL_HUMAN (Q15695) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit-related protein 1 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 1)
          Length = 479

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +2

Query: 143 TWQMTLGCGGLSMEPGPYPERIGERD---CSYYMRTGFCRFGVTCKFNH 280
           TWQ        + EP P   R+ E+D   C +Y +TG CRFG  C   H
Sbjct: 157 TWQ--------NPEP-PVDFRVMEKDRANCPFYSKTGACRFGDRCSRKH 196



 Score = 31.2 bits (69), Expect = 2.6
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATC--KFHHPREKAAIAISAQLNVLG 466
           C +Y KTG C+FG  C  K + P     + I +     G
Sbjct: 177 CPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 215



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +2

Query: 476 RLNEKE---CVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSI 595
           R+ EK+   C +Y +TG C+F   C   H  P+S+   +  S+
Sbjct: 168 RVMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSM 210

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>VATI_AERPE (Q9YEA0) V-type ATP synthase subunit I (EC 3.6.3.14) (V-type ATPase|
           subunit I)
          Length = 686

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 292 PVCRVIEFAGYPKPTKSSPHIVTAITLSYT 203
           P  RV+E  GYP+P +  P +  AITL  T
Sbjct: 334 PFSRVVELYGYPEPNEIVPTVFLAITLPLT 363

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>YTH1_YEAST (Q06102) Protein YTH1|
          Length = 208

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+++L+ G CK    C++ H                 Y LR    ECV++ + G C  + 
Sbjct: 67  CRHWLR-GLCKKNDQCEYLHE----------------YNLR-KMPECVFFSKNGYCTQSP 108

Query: 536 TCKFHHPQPSS 568
            C++ H  P+S
Sbjct: 109 DCQYLHIDPAS 119



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 8/121 (6%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGAT 400
           C +++R G C+    C++ H               EY  R   PEC ++ K G C     
Sbjct: 67  CRHWLR-GLCKKNDQCEYLH---------------EYNLRK-MPECVFFSKNGYCTQSPD 109

Query: 401 CKFHHPREKAAIAISAQLNVLGYPL-------RLNEKECVYYLRTGQCKFA-STCKFHHP 556
           C++ H    + I       +   PL        + +  C  Y+ TG C      C   HP
Sbjct: 110 CQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQRYM-TGFCPLGKDECDMEHP 168

Query: 557 Q 559
           Q
Sbjct: 169 Q 169

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>G6PD_CRIGR (O55044) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)|
          Length = 514

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -2

Query: 500 KHIPSHSNAVGS-LEHSTVQRLQLQPSLWDDGTCMLLQTCMSQSSGNIDTQVDQLCKDTR 324
           KH+ SH NA+   ++ + +  L L P++++  T  + +TCMSQ+  N         +D +
Sbjct: 118 KHLNSHMNALHQGMQANRLFYLALPPTVYEAVTKNIQETCMSQTGWNRIIVEKPFGRDLQ 177

Query: 323 LSSLQQQQPASCLQGD*ICRL 261
            S+      +S  + D I R+
Sbjct: 178 SSNQLSNHISSLFREDQIYRI 198

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>G6PD1_MOUSE (Q00612) Glucose-6-phosphate 1-dehydrogenase X (EC 1.1.1.49) (G6PD)|
          Length = 514

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -2

Query: 500 KHIPSHSNAVGS-LEHSTVQRLQLQPSLWDDGTCMLLQTCMSQSSGNIDTQVDQLCKDTR 324
           KH+ SH NA+   ++ + +  L L P++++  T  + +TCMSQ+  N         +D +
Sbjct: 118 KHLNSHMNALHQGMQANRLFYLALPPTVYEAVTKNIQETCMSQTGWNRIIVEKPFGRDLQ 177

Query: 323 LSSLQQQQPASCLQGD*ICRL 261
            S+      +S  + D I R+
Sbjct: 178 SSNQLSNHISSLFREDQIYRI 198

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>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1|
           protein 24)
          Length = 259

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPAD 289
           C  Y +TG+C +G +CKF H  D
Sbjct: 144 CKDYKQTGYCGYGDSCKFLHSRD 166



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPRE 424
           QP+ C+ Y +TG C +G +CKF H R+
Sbjct: 140 QPDVCKDYKQTGYCGYGDSCKFLHSRD 166

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>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+ + ++GTCK+G  C+F H           +L  L    +   + C  +   G C +  
Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFH--------ELRSLTRHPKYKTELCRTFHTIGFCPYGP 183

Query: 536 TCKFHH 553
            C F H
Sbjct: 184 RCHFIH 189

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>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24|
          Length = 329

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPADRKLA 301
           C  Y  TGFC +G +CKF H     LA
Sbjct: 183 CKDYKETGFCGYGDSCKFLHDRGDYLA 209



 Score = 30.8 bits (68), Expect = 3.5
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPR 421
           QP+ C+ Y +TG C +G +CKF H R
Sbjct: 179 QPDVCKDYKETGFCGYGDSCKFLHDR 204

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>CWC24_YARLI (Q6CB23) Pre-mRNA-splicing factor CWC24|
          Length = 256

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPRE 424
           QP+ C+ Y  TG C +G +CKF H RE
Sbjct: 133 QPDVCKDYKLTGFCGYGDSCKFLHMRE 159



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  Y  TGFC +G +CKF H
Sbjct: 137 CKDYKLTGFCGYGDSCKFLH 156

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>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24|
          Length = 339

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPRE 424
           C+ + +TG C FG +CKF H RE
Sbjct: 176 CKDWKQTGFCGFGDSCKFLHARE 198



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNH 280
           C  + +TGFC FG +CKF H
Sbjct: 176 CKDWKQTGFCGFGDSCKFLH 195

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>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/66 (25%), Positives = 28/66 (42%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCKFAS 535
           C+ + ++GTCK+G  C+F H           +L  L    +   + C  +   G C +  
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFH--------ELRSLTRHPKYKTELCRTFHTIGFCPYGP 210

Query: 536 TCKFHH 553
            C F H
Sbjct: 211 RCHFIH 216



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 21/89 (23%), Positives = 33/89 (37%)
 Frame = +2

Query: 149 QMTLGCGGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAARMKGE 328
           Q   G GG  +    Y   +    C  +  +G C++G  C+F H           R    
Sbjct: 139 QQQKGGGGSQINSTRYKTEL----CRPFEESGTCKYGEKCQFAH------GFHELRSLTR 188

Query: 329 YPYRVGQPECQYYLKTGTCKFGATCKFHH 415
           +P +     C+ +   G C +G  C F H
Sbjct: 189 HP-KYKTELCRTFHTIGFCPYGPRCHFIH 216

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>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 788 RPTCRHFMMKGNCRYENNCAFYHP 811

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>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING|
           finger protein 64)
          Length = 485

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYYLRTGQCK 526
           Q  C+Y+ K G CK G  C++ H                    RL    C Y+ R G C 
Sbjct: 93  QVTCRYF-KYGICKEGDNCRYSHDLSD----------------RLCGVVCKYFQR-GCCV 134

Query: 527 FASTCKFHHPQP------SSTMVAIRSSICSPGQSTTSPG 628
           +   C+  H +P      ++T +  +SS+ +    ++  G
Sbjct: 135 YGDRCRCEHSKPLKQEEATATELTTKSSLAASSSLSSIVG 174



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 13/95 (13%)
 Frame = +2

Query: 230 YMRTGFCRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPECQYYLKTGTCKFGATCKF 409
           Y + G C+ G  C+++H    +L     +                Y + G C +G  C+ 
Sbjct: 98  YFKYGICKEGDNCRYSHDLSDRLCGVVCK----------------YFQRGCCVYGDRCRC 141

Query: 410 HHPR-------------EKAAIAISAQLNVLGYPL 475
            H +              K+++A S+ L+ +  PL
Sbjct: 142 EHSKPLKQEEATATELTTKSSLAASSSLSSIVGPL 176

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 841 RPVCRHFMMKGNCRYENNCAFYHP 864



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 482 NEKECVYYLRTGQCKFASTCKFHHP 556
           N   C +++  G C++ + C F+HP
Sbjct: 840 NRPVCRHFMMKGNCRYENNCAFYHP 864

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>ZGPAT_HUMAN (Q8N5A5) Zinc finger CCCH-type with G patch domain protein (Zinc|
           finger CCCH-type domain-containing protein 9)
          Length = 531

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 467 YPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 559
           YP   + K C ++L  G+C+F   C+F H Q
Sbjct: 171 YPTHKSLKPCPFFLE-GKCRFKENCRFSHGQ 200

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 857 RPVCRHFMMKGNCRYENNCAFYHP 880



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 482 NEKECVYYLRTGQCKFASTCKFHHP 556
           N   C +++  G C++ + C F+HP
Sbjct: 856 NRPVCRHFMMKGNCRYENNCAFYHP 880

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>PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C+++ K G C++   C F+HP
Sbjct: 158 RPVCRHFAKKGHCRYEDLCAFYHP 181

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>PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 188

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C+++ K G C++   C F+HP
Sbjct: 158 RPVCRHFAKKGHCRYEDLCAFYHP 181

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>ZGPAT_MOUSE (Q8VDM1) Zinc finger CCCH-type with G patch domain protein|
          Length = 511

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 467 YPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 559
           YP   + K C ++L  G+C+F   C+F H Q
Sbjct: 170 YPTHKSLKPCPFFLE-GKCRFKENCRFSHGQ 199

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 894 RPVCRHFMMKGNCRYENNCAFYHP 917

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 909 RPVCRHFMMKGNCRYENNCAFYHP 932



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 482 NEKECVYYLRTGQCKFASTCKFHHP 556
           N   C +++  G C++ + C F+HP
Sbjct: 908 NRPVCRHFMMKGNCRYENNCAFYHP 932

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 909 RPVCRHFMMKGNCRYENNCAFYHP 932



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 482 NEKECVYYLRTGQCKFASTCKFHHP 556
           N   C +++  G C++ + C F+HP
Sbjct: 908 NRPVCRHFMMKGNCRYENNCAFYHP 932

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C++++  G C++   C F+HP
Sbjct: 909 RPVCRHFMMKGNCRYENNCAFYHP 932



 Score = 29.6 bits (65), Expect = 7.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 482 NEKECVYYLRTGQCKFASTCKFHHP 556
           N   C +++  G C++ + C F+HP
Sbjct: 908 NRPVCRHFMMKGNCRYENNCAFYHP 932

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>PRR3_PIG (Q767L1) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56) (Fragment)
          Length = 131

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C+++ K G C++   C F+HP
Sbjct: 101 RPVCRHFAKKGHCRYEDLCAFYHP 124

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>Y4762_ARATH (Q8RY73) Protein At4g17620, chloroplast precursor|
          Length = 544

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = +2

Query: 95  PTGLTIGSH--YGSTGEATWQMTLGCGGLSMEPGPYPERIGER 217
           P G +  +H   G  G   W    G  GL   PGPYP R G R
Sbjct: 139 PAGWSNDNHGGRGGMGRGRWSNGRGGPGLLPRPGPYPGRGGNR 181

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>MEX6_CAEEL (Q09436) Zinc finger protein mex-6|
          Length = 467

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +2

Query: 248 CRFGVTCKFNHPADRKLAVAAARMKGEYPYRVGQPE-CQYYLK--TGTCKFGATCKFHHP 418
           C  G  CKF H       + A+ +   YP    + + C+ + +  +G C +G  C+F HP
Sbjct: 289 CALGARCKFAHGLKE---LRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRCEFVHP 345

Query: 419 RE 424
            +
Sbjct: 346 SD 347

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>PRP12_MOUSE (Q8BZ20) Poly [ADP-ribose] polymerase 12 (EC 2.4.2.30) (PARP-12)|
           (Zinc finger CCCH type domain-containing protein 1)
          Length = 711

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHH 415
           CQY+L+ G CKFG +CK  H
Sbjct: 190 CQYFLQ-GECKFGTSCKRSH 208

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>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24|
          Length = 216

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPREKAAIAISAQLN-VLGYPLRLNEKECVYYLRTGQ 520
           QP+ C+ + + G C +G TCKF H R+++   I  + +  +G    + EKE + +    +
Sbjct: 100 QPDVCKDFQQIGYCGYGDTCKFLHVRDESRQKIPIKKDWEIGGQKEVKEKEDIPF----K 155

Query: 521 CKFASTCKFHHPQPSST 571
           C     CK  +  P  T
Sbjct: 156 CVL---CKSDYKSPIKT 169

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>PRP12_HUMAN (Q9H0J9) Poly [ADP-ribose] polymerase 12 (EC 2.4.2.30) (PARP-12)|
           (Zinc finger CCCH type domain-containing protein 1)
          Length = 701

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 356 CQYYLKTGTCKFGATCKFHH 415
           CQY+L+ G CKFG +CK  H
Sbjct: 181 CQYFLQ-GECKFGTSCKRSH 199

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>PRR3_RAT (Q6MG07) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 186

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C+++ K G C++   C F+HP
Sbjct: 156 RPVCRHFSKKGHCRYEDHCAFYHP 179

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>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24|
          Length = 226

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 221 CSYYMRTGFCRFGVTCKFNHPAD 289
           C  + +TG+C +G +CKF H  D
Sbjct: 113 CKDFKQTGYCGYGDSCKFLHSRD 135



 Score = 30.0 bits (66), Expect = 5.9
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +2

Query: 347 QPE-CQYYLKTGTCKFGATCKFHHPRE 424
           QP+ C+ + +TG C +G +CKF H R+
Sbjct: 109 QPDVCKDFKQTGYCGYGDSCKFLHSRD 135

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>PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 190

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 347 QPECQYYLKTGTCKFGATCKFHHP 418
           +P C+++ K G C++   C F+HP
Sbjct: 160 RPVCRHFSKKGHCRYEDHCAFYHP 183

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>SSH_DROME (Q6NN85) Protein phosphatase Slingshot (EC 3.1.3.48) (EC 3.1.3.16)|
          Length = 1045

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
 Frame = -2

Query: 500 KHIP-SHSNAVGSLEHSTVQRLQLQPSLWDDGTCMLLQTC------MSQSSGNIDTQVDQ 342
           KH P S    +  LE     +L  QP +W   T ++ QT          SSGNID++ D 
Sbjct: 661 KHTPLSVRTRIHDLEAHRADQLPQQP-VWTSLTKLITQTSHLGKSVSGSSSGNIDSRRDS 719

Query: 341 LCKD 330
            C D
Sbjct: 720 SCSD 723

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>ADA2_HUMAN (O75478) Transcriptional adapter 2-like (ADA2-like protein)|
          Length = 443

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = -2

Query: 542 YMCLQTYTALFLNNKHIPSHSNAVGSLEHSTVQRLQLQPSLWDDGTCMLLQTCMSQSSGN 363
           ++CLQ +T  F   KH   H+  + + +        L PS        LL+  M    GN
Sbjct: 40  FLCLQCFTRGFEYKKHQSDHTYEIMTSDFPV-----LDPSWTAQEEMALLEAVMDCGFGN 94

Query: 362 IDTQVDQLCKDTR 324
                +Q+C  T+
Sbjct: 95  WQDVANQMCTKTK 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,757,950
Number of Sequences: 219361
Number of extensions: 1947567
Number of successful extensions: 5553
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 4860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5371
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5824436538
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result