ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63j06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 137 bits (69), Expect = 6e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 |||||||| || |||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 31301 ccctccgttcggaaatacttgtcctaaaaatgaatgtatctagacttattttagttatag 31242 Query: 215 atacattcattatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| ||||| || |||| || |||||||||||| ||||||||||||||| Sbjct: 31241 atacatctattatattcatttctaggacaagtatttctggacggagggagtat 31189 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 232 atttttaagacaagtatttccggacggagggagta 266 ||||||| |||||||||||||| |||||||||||| Sbjct: 31271 atttttaggacaagtatttccgaacggagggagta 31305 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Plus Query: 149 aatacgccctccgtccgaaaatacttgtcctagagatgaat 189 ||||| |||||||||| |||||||||||||||| |||||| Sbjct: 31188 aatactccctccgtccagaaatacttgtcctagaaatgaat 31228
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 133 bits (67), Expect = 9e-28 Identities = 100/111 (90%) Strand = Plus / Plus Query: 156 cctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttataga 215 |||||||||| |||||||||||||| ||||||||||||||||||||||| || || |||| Sbjct: 9776 cctccgtccggaaatacttgtcctacagatgaatgtatctagacttattctaattgtaga 9835 Query: 216 tacattcattatgtttatttttaagacaagtatttccggacggagggagta 266 ||||| |||||| | |||||||| ||||||||||| |||||||| |||||| Sbjct: 9836 tacatccattatatgtatttttaggacaagtattttcggacggatggagta 9886 Score = 79.8 bits (40), Expect = 1e-11 Identities = 100/116 (86%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 156 cctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttataga 215 ||||||| || |||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 27351 cctccgttcggaaatacttgttttagagatgaatgtatctagatttattttaattataga 27410 Query: 216 tacattca-ttatgtttatttttaagac-aagtatttccggacggagggagtatga 269 ||| |||| |||| | |||| || ||| |||||||| ||||||||||||||||| Sbjct: 27411 tac-ttcagttatatccatttctaggacaaagtattttgggacggagggagtatga 27465 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 158 tccgtccgaaaatacttgtccta 180 ||||||||||||||||||||||| Sbjct: 9879 tccgtccgaaaatacttgtccta 9857 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagta 266 |||||||||||||||||||||| |||| Sbjct: 9797 gacaagtatttccggacggaggtagta 9771
>gb|AY137517.1| Hordeum vulgare subsp. vulgare hypersensitive-induced reaction protein 3 (hir3) gene, complete cds Length = 6537 Score = 107 bits (54), Expect = 5e-20 Identities = 103/118 (87%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| ||| ||||||| |||||| |||| | || |||||||||||||||||||||||||| Sbjct: 231 atactccccccgtccggaaatacctgtcttcgaaatgaatgtatctagacttattttagt 172 Query: 210 tatagatacattcattatgtttatttttaagacaagtatttccggacggagggagtat 267 |||| ||||| ||||| | ||||| |||| ||||||||||| | |||||||||||||| Sbjct: 171 tatacataca-tcattttatttatctttaggacaagtattttctgacggagggagtat 115 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagat 185 |||| ||||||||| |||||||||||||||| |||| Sbjct: 115 atactccctccgtcagaaaatacttgtcctaaagat 150 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 238 aagacaagtatttccggacggagggagtatg 268 |||||| |||||||||||||| ||||||||| Sbjct: 202 aagacaggtatttccggacggggggagtatg 232
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 97.6 bits (49), Expect = 5e-17 Identities = 100/117 (85%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| ||| ||||||| |||||||||||||| ||||||||||||||| | |||||||||| Sbjct: 14583 atactccccccgtccggaaatacttgtcctaaagatgaatgtatctaaatttattttagt 14642 Query: 210 tatagatacattcattatgtttatttttaagacaagtatttccggacggagggagta 266 ||| ||||||| |||||| | |||| || ||||| ||||| |||| ||||||||| Sbjct: 14643 tatggatacatccattatatccatttctaggacaaatattttcggatagagggagta 14699 Score = 56.0 bits (28), Expect = 2e-04 Identities = 98/120 (81%), Gaps = 1/120 (0%) Strand = Plus / Minus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| ||||| ||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| Sbjct: 52255 atactccctctgtccggaaatatttgtcataggaatggatgtatctagatgtattttagt 52196 Query: 210 tatagatacattcattatgttt-atttttaagacaagtatttccggacggagggagtatg 268 | |||||| || |||| | | |||| | |||||||| |||||||||||||||||||| Sbjct: 52195 tctagatatatccatttttatccatttgtgtgacaagtaattccggacggagggagtatg 52136 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 235 tttaagacaagtatttccggacggagggagtat 267 |||| ||||||||||||||||||| |||||||| Sbjct: 14615 tttaggacaagtatttccggacggggggagtat 14583 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtat 267 ||||| ||||||||||| |||||||||| Sbjct: 52228 gacaaatatttccggacagagggagtat 52255
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 89.7 bits (45), Expect = 1e-14 Identities = 103/120 (85%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| ||||||||||| || || ||||| |||| ||| |||||||||||| ||||||||| Sbjct: 69794 atactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagt 69853 Query: 210 tatagatacattcattatgttt--atttttaagacaagtatttccggacggagggagtat 267 | ||||||||| |||| | ||| ||||| | |||||||| ||||||||||||||||||| Sbjct: 69854 tctagatacatccatt-tctttccattttgacgacaagtacttccggacggagggagtat 69912 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||| || ||||||||||||||||||| Sbjct: 69821 gacaaataattccggacggagggagtat 69794
>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds Length = 7963 Score = 89.7 bits (45), Expect = 1e-14 Identities = 103/120 (85%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| ||||||||||| || || ||||| |||| ||| |||||||||||| ||||||||| Sbjct: 1746 atactccctccgtccggaattatttgtcatagaaatggatgtatctagacgtattttagt 1805 Query: 210 tatagatacattcattatgttt--atttttaagacaagtatttccggacggagggagtat 267 | ||||||||| |||| | ||| ||||| | |||||||| ||||||||||||||||||| Sbjct: 1806 tctagatacatccatt-tctttccattttgacgacaagtacttccggacggagggagtat 1864 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||| || ||||||||||||||||||| Sbjct: 1773 gacaaataattccggacggagggagtat 1746
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 81.8 bits (41), Expect = 3e-12 Identities = 96/113 (84%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||| ||||||||||||||||| | |||||| |||||||||| |||||||||| ||| Sbjct: 36601 ccctctgtccgaaaatacttgtcattgagatgggtgtatctagatgtattttagttctag 36542 Query: 215 atacattcattatgttt-atttttaagacaagtatttccggacggagggagta 266 ||||||||||| | | ||||| | ||||||||||| ||||| ||||||||| Sbjct: 36541 atacattcatttttatccattttgatgacaagtattttcggacagagggagta 36489 Score = 75.8 bits (38), Expect = 2e-10 Identities = 97/114 (85%), Gaps = 2/114 (1%) Strand = Plus / Plus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatc-tagacttattttagttata 213 |||||||||||||||||||||||| || ||| ||||||| ||| |||||||||| || Sbjct: 93466 ccctccgtccgaaaatacttgtccgaggaatggatgtatcaaagatgtattttagttcta 93525 Query: 214 gatacattca-ttatgtttatttttaagacaagtatttccggacggagggagta 266 ||||||| || |||| | |||| | ||||||||||||||||||||||||||| Sbjct: 93526 gatacatccatttatatccatttctgcgacaagtatttccggacggagggagta 93579 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| ||||||||||||||||||||||| Sbjct: 37380 atactccctccgtccgaaaatacttgtc 37407 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| |||||||||||||||| Sbjct: 37407 gacaagtattttcggacggagggagtat 37380 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||| ||||||||||||||| Sbjct: 93488 gacaagtattttcggacggagggagta 93462 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 188 atgtatctagacttattttagttatagatac 218 |||||||||||||||||||||| ||||||| Sbjct: 88945 atgtatctagacttattttagtgctagatac 88975
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 192 atctagacttattttagttatagatacattcattatgtttatttttaagacaagtatttc 251 |||||||||||||||| | ||||||||||||||| ||| ||||||| ||||| |||||| Sbjct: 147705 atctagacttattttaataatagatacattcattttgtacatttttaggacaactatttc 147764 Query: 252 cggacggaggga 263 |||||| ||||| Sbjct: 147765 cggacgaaggga 147776 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 191 tatctagacttattttagttatagatacattcatt 225 ||||||||||||| ||| | ||||||||||||||| Sbjct: 147614 tatctagacttatcttaataatagatacattcatt 147648 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 241 acaagtatttccggacggagggagta 266 ||||||||||||| |||||||||||| Sbjct: 147599 acaagtatttccgaacggagggagta 147574
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 71.9 bits (36), Expect = 3e-09 Identities = 103/124 (83%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| |||||||||||||| || ||||| ||| ||| |||||||||||| ||||||||| Sbjct: 5971 atactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagt 6030 Query: 210 tatagatacattcattatgttt-atttttaagacaagtatttccggacggagggagtatg 268 | ||||||||| |||| | | |||| | ||||||| ||||||||||||||||||| Sbjct: 6031 tctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagtatc 6090 Query: 269 attt 272 |||| Sbjct: 6091 attt 6094
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 67.9 bits (34), Expect = 4e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 501 acaaacagataataataacaatatatattaggtaagcaagttgcacaagtgggccttt 558 |||||||||||||||||| |||| |||||||||| ||||||||| |||||| |||||| Sbjct: 13636838 acaaacagataataataaaaata-atattaggtaggcaagttgcccaagtgtgccttt 13636782 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 599 tcaagcttgacagtgtagcttgcctatcagaacactttggattgcatatttacattattt 658 |||||| ||||| | ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 13636717 tcaagcatgacaatatagctcgcaaatcagaacactctggattgcatatttgcattactt 13636658 Query: 659 cttataccacttgatc 674 || |||||||||||| Sbjct: 13636657 tttgtaccacttgatc 13636642 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 32 agagaagcccaacctgataactatcaaatgtaatatcttccacttggaattcaggcagag 91 ||||||| ||| |||||||| |||||| |||||||| || ||||| |||| |||||| Sbjct: 13637168 agagaagtgcaatctgataaccatcaaacataatatctaccttttggagttcatgcagag 13637109 Query: 92 gtaagcc 98 ||||||| Sbjct: 13637108 gtaagcc 13637102
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 67.9 bits (34), Expect = 4e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 501 acaaacagataataataacaatatatattaggtaagcaagttgcacaagtgggccttt 558 |||||||||||||||||| |||| |||||||||| ||||||||| |||||| |||||| Sbjct: 74254 acaaacagataataataaaaata-atattaggtaggcaagttgcccaagtgtgccttt 74198 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 599 tcaagcttgacagtgtagcttgcctatcagaacactttggattgcatatttacattattt 658 |||||| ||||| | ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 74133 tcaagcatgacaatatagctcgcaaatcagaacactctggattgcatatttgcattactt 74074 Query: 659 cttataccacttgatc 674 || |||||||||||| Sbjct: 74073 tttgtaccacttgatc 74058 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 32 agagaagcccaacctgataactatcaaatgtaatatcttccacttggaattcaggcagag 91 ||||||| ||| |||||||| |||||| |||||||| || ||||| |||| |||||| Sbjct: 74584 agagaagtgcaatctgataaccatcaaacataatatctaccttttggagttcatgcagag 74525 Query: 92 gtaagcc 98 ||||||| Sbjct: 74524 gtaagcc 74518
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 67.9 bits (34), Expect = 4e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 501 acaaacagataataataacaatatatattaggtaagcaagttgcacaagtgggccttt 558 |||||||||||||||||| |||| |||||||||| ||||||||| |||||| |||||| Sbjct: 34952 acaaacagataataataaaaata-atattaggtaggcaagttgcccaagtgtgccttt 34896 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 599 tcaagcttgacagtgtagcttgcctatcagaacactttggattgcatatttacattattt 658 |||||| ||||| | ||||| || ||||||||||| |||||||||||||| ||||| || Sbjct: 34831 tcaagcatgacaatatagctcgcaaatcagaacactctggattgcatatttgcattactt 34772 Query: 659 cttataccacttgatc 674 || |||||||||||| Sbjct: 34771 tttgtaccacttgatc 34756 Score = 46.1 bits (23), Expect = 0.16 Identities = 56/67 (83%) Strand = Plus / Minus Query: 32 agagaagcccaacctgataactatcaaatgtaatatcttccacttggaattcaggcagag 91 ||||||| ||| |||||||| |||||| |||||||| || ||||| |||| |||||| Sbjct: 35282 agagaagtgcaatctgataaccatcaaacataatatctaccttttggagttcatgcagag 35223 Query: 92 gtaagcc 98 ||||||| Sbjct: 35222 gtaagcc 35216
>gb|L41869.1|BLYBGQ6 Hordeum vulgare L. beta-glucosidase (BGQ60) gene, complete cds Length = 4152 Score = 67.9 bits (34), Expect = 4e-08 Identities = 98/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| |||| |||||| |||||||||||| | ||| ||||||||||| ||||||||| Sbjct: 3013 atactcccttcgtccggaaatacttgtccaaagaatggatgtatctagatgtattttagt 3072 Query: 210 tatagatacattca-ttatgtttatttttaagacaagtatttccggacggagggagta 266 ||||||||||| || || | || |||||| |||||||| ||||| | |||||||||| Sbjct: 3073 tatagatacatccatttctattcatttttgcgacaagtaattccgcatggagggagta 3130 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtatgat 270 |||||||||||||||||| |||||||||||| Sbjct: 3040 gacaagtatttccggacgaagggagtatgat 3010
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 65.9 bits (33), Expect = 2e-07 Identities = 100/121 (82%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 148 taatacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttatttta 207 |||||| ||||||||||| ||||||||||| | ||| ||||||||||| ||||||| Sbjct: 837 taatactccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtatttta 778 Query: 208 gttatagatacattca-ttatgtttatttttaagacaagtatttccggacggagggagta 266 ||| ||||||||| || || | | |||| || ||||||||||| |||||||||||||| Sbjct: 777 gttctagatacatccatttttatgcatttctacgacaagtattttgggacggagggagta 718 Query: 267 t 267 | Sbjct: 717 t 717 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtat 267 |||||||||||||||||||||||||||| Sbjct: 808 gacaagtatttccggacggagggagtat 835 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 711 acacaaatactccctccgtcccaaaatacttgtcgtaga 749
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagt 209 |||| ||||||||||| ||||||||||| ||| |||||| |||||||| ||||||| | Sbjct: 33623 atactccctccgtccggaaatacttgtcggagaaatgaatctatctagatgtattttaat 33682 Query: 210 tatagatacattcatt 225 | ||||||||| |||| Sbjct: 33683 tctagatacatccatt 33698 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 |||||||||||||||||||||||||||| Sbjct: 33650 gacaagtatttccggacggagggagtat 33623
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||| ||||| ||||||||||| || ||| ||||| |||||| |||||||||| ||| Sbjct: 196708 ccctctgtccggaaatacttgtcagaggaatggatgtacctagacgtattttagttctag 196649 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| | |||||||||||| ||||||||||||||| Sbjct: 196648 atacatccatttttatgcatttctccgacaagtatttcaggacggagggagtat 196595 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 229 tttatttttaagacaagtatttccggacggagggagta 266 |||||||| | |||||||||||||||||||||| |||| Sbjct: 101882 tttattttgatgacaagtatttccggacggaggaagta 101845 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||| ||||||||| Sbjct: 196686 gacaagtatttccggacagagggagta 196712 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 148 taatacgccctccgtccgaaaatacttgtc 177 |||||| |||||||||| |||||||||||| Sbjct: 101974 taatactccctccgtccaaaaatacttgtc 101945 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 101945 gacaagtatttttggacggagggagtat 101972
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 184 atgaatgtatctagacttattttagttatagatacattcatt 225 ||||||||||||||| |||||||| || |||||||||||||| Sbjct: 109473 atgaatgtatctagatttattttaattctagatacattcatt 109514 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtatg 268 |||||||||||||||||||||| |||||| Sbjct: 113518 gacaagtatttccggacggaggaagtatg 113546 Score = 48.1 bits (24), Expect = 0.040 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 188 atgtatctagacttattttagttatagatacattca-ttatgtttatttttaagacaagt 246 ||||||||||| |||||||||| ||||||||| || || ||| ||||| | ||||||| Sbjct: 113497 atgtatctagatgtattttagttctagatacatccatttttgtccattttgatgacaagt 113438 Query: 247 atttccggacggaggg 262 |||| |||||| |||| Sbjct: 113437 attttcggacgaaggg 113422 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 gccctccgtccgaaaatacttgtc 177 ||||| |||||||||||||||||| Sbjct: 113421 gcccttcgtccgaaaatacttgtc 113444
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 785 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 726 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 725 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 672 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 763 gacaagtatttccggacggagggagta 789 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 666 acacaaatactccctccgtcccaaaatacttgtcgtaga 704
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 827 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 768 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 767 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 714 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 805 gacaagtatttccggacggagggagta 831 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 708 acacaaatactccctccgtcccaaaatacttgtcgtaga 746
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 768 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 709 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 708 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 746 gacaagtatttccggacggagggagta 772 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 649 acacaaatactccctccgtcccaaaatacttgtcgtaga 687
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 772 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 713 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 712 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 659 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 750 gacaagtatttccggacggagggagta 776 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtcctaga 182 |||| |||||||||| |||||||||||| |||| Sbjct: 659 atactccctccgtcccaaaatacttgtcgtaga 691
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 813 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 754 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 753 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 700 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 791 gacaagtatttccggacggagggagta 817 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 694 acacaaatactccctccgtcccaaaatacttgtcgtaga 732
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 836 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 777 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 776 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 723 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 814 gacaagtatttccggacggagggagta 840 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 717 acacaaatactccctccgtcccaaaatacttgtcgtaga 755
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 60.0 bits (30), Expect = 1e-05 Identities = 94/114 (82%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 815 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 756 Query: 215 atacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 755 atacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 702 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 793 gacaagtatttccggacggagggagta 819 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 696 acacaaatactccctccgtcccaaaatacttgtcgtaga 734
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 60.0 bits (30), Expect = 1e-05 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 188 atgtatctagacttattttagttatagatacat-tcattatgtttatttttaagacaagt 246 |||||||||||| |||||||||| ||||||||| || || | | | ||| | ||||||| Sbjct: 10803 atgtatctagacatattttagttctagatacatctctttttagtcactttgatgacaagt 10744 Query: 247 atttccggacggagggagtatg 268 |||| ||||||||||||||||| Sbjct: 10743 attttcggacggagggagtatg 10722 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtatg 268 ||||||||||||||||||||||||||||| Sbjct: 10824 gacaagtatttccggacggagggagtatg 10852 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| ||||||||||||||||||||||| Sbjct: 10723 atactccctccgtccgaaaatacttgtc 10750 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| ||||||||||| ||||||||||| Sbjct: 10851 atactccctccgtccggaaatacttgtc 10824
>gb|AY533103.1| Triticum aestivum beta-expansin 1 (EXPB1) gene, complete cds Length = 1149 Score = 56.0 bits (28), Expect = 2e-04 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 188 atgtatctagacttattttagttatagatacat-tcattatgtttatttttaagacaagt 246 |||||| |||| |||||||||| |||||| || || || |||| ||||| | ||||||| Sbjct: 282 atgtatttagatgtattttagttctagatatatctctttttgttcattttgatgacaagt 223 Query: 247 atttccggacggagggagta 266 |||| ||||||||||||||| Sbjct: 222 attttcggacggagggagta 203 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 229 tttatttttaagacaagtatttccggacggagg 261 |||||||| | |||||||||||||||||||||| Sbjct: 292 tttattttgatgacaagtatttccggacggagg 324 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 155 ccctccgtccgaaaatacttgtc 177 ||||||||||||||||||||||| Sbjct: 207 ccctccgtccgaaaatacttgtc 229
>gb|AY491681.1| Triticum monococcum DV92 BAC 109N23, complete sequence Length = 101101 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 170 tacttgtcctagagatgaatgtatctagacttattttagttatagatacat 220 |||||||| ||| ||||||||||||||| |||||||||| ||||||||| Sbjct: 88843 tacttgtcgcagaaatgaatgtatctagatgtattttagttctagatacat 88793
>gb|AY235463.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2E11) gene, exons 8 through 15, partial sequence Length = 3592 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 803 gacaagtatttccggacggagggagta 829 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttattttagttatag 214 ||||||||||| ||||||||||| | ||| ||||||||||| |||||||||| ||| Sbjct: 825 ccctccgtccggaaatacttgtcgggggaatggatgtatctagatgtattttagttctag 766 Query: 215 atacattcatt 225 |||||| |||| Sbjct: 765 atacatccatt 755
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagta 266 ||||||||||||||||||||||||||| Sbjct: 817 gacaagtatttccggacggagggagta 843 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/115 (83%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagaga-tgaatgtatctagacttattttagttata 213 ||||||||||| ||||||||||| |||| || ||||||||||| |||||||||| || Sbjct: 839 ccctccgtccggaaatacttgtcgg-gagaatggatgtatctagatgtattttagttcta 781 Query: 214 gatacattca-ttatgtttatttttaagacaagtatttccggacggagggagtat 267 ||||||| || || | | |||| || ||||||||||| ||||||||||||||| Sbjct: 780 gatacatccatttttatgcatttctacgacaagtattttgggacggagggagtat 726 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 144 acactaatacgccctccgtccgaaaatacttgtcctaga 182 |||| ||||| |||||||||| |||||||||||| |||| Sbjct: 720 acacaaatactccctccgtcccaaaatacttgtcgtaga 758
>emb|AJ459254.1|TAE459254 Triticum aestivum TAA1c gene for fatty acyl coA reductase Length = 2522 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 241 acaagtatttccggacggagggagtat 267 ||||||||||||||||||||||||||| Sbjct: 2238 acaagtatttccggacggagggagtat 2264
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 52.0 bits (26), Expect = 0.003 Identities = 26/26 (100%) Strand = Plus / Minus Query: 241 acaagtatttccggacggagggagta 266 |||||||||||||||||||||||||| Sbjct: 203647 acaagtatttccggacggagggagta 203622 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtatgattt 272 ||||||||||||| |||||||| ||||| |||| Sbjct: 203711 gacaagtatttccagacggaggaagtattattt 203743
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 50.1 bits (25), Expect = 0.010 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 188 atgtatctagacttattttagttatagatacattca-ttatgtttatttttaagacaagt 246 |||||| |||| |||||||||| || ||||||||| || | | ||||| | ||||||| Sbjct: 8845 atgtatttagatatattttagttctaaatacattcaattttatccattttgatgacaagt 8904 Query: 247 atttccggacggagggagtat 267 |||| |||||||||||||||| Sbjct: 8905 attttcggacggagggagtat 8925 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| ||||||||||||||||||||||| Sbjct: 8925 atactccctccgtccgaaaatacttgtc 8898 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Minus Query: 224 ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||| |||||||| | ||||||||||| |||||| ||||||||| Sbjct: 8840 ttatatttattttgatgacaagtattttcggacgaagggagtat 8797 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 149 aatacgccctccgtccgaaaatacttgtc 177 ||||| |||| |||||||||||||||||| Sbjct: 8796 aatactcccttcgtccgaaaatacttgtc 8824
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 188 atgtatctagacttattttagttatagat 216 |||||||||||||||||||| |||||||| Sbjct: 7683 atgtatctagacttattttatttatagat 7711
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 50.1 bits (25), Expect = 0.010 Identities = 86/105 (81%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 165 gaaaatacttgtcctagagatgaatgtatctagacttattttagttatagatacattca- 223 ||||||||||||| ||| ||| ||||||||||| |||| || || ||||||||| || Sbjct: 11525 gaaaatacttgtcataggaatgtatgtatctagatgtattataattctagatacatccat 11584 Query: 224 ttatgtttatttttaagacaagtatttccggacggagggagtatg 268 || | | |||| | |||||||| |||||||||||||||||||| Sbjct: 11585 ttttatacatttatgtgacaagtaattccggacggagggagtatg 11629
>gb|AC131210.3| Homo sapiens 3 BAC RP13-635I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182479 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 tctttctctatctttccttttctccttcc 374 |||||||||||||||||||||| |||||| Sbjct: 37269 tctttctctatctttccttttcaccttcc 37297
>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA, complete cds Length = 3429 Score = 50.1 bits (25), Expect = 0.010 Identities = 86/105 (81%), Gaps = 1/105 (0%) Strand = Plus / Plus Query: 165 gaaaatacttgtcctagagatgaatgtatctagacttattttagttatagatacattca- 223 ||||||||||||| ||| ||| ||||||||||| |||| || || ||||||||| || Sbjct: 3197 gaaaatacttgtcataggaatgtatgtatctagatgtattataattctagatacatccat 3256 Query: 224 ttatgtttatttttaagacaagtatttccggacggagggagtatg 268 || | | |||| | |||||||| |||||||||||||||||||| Sbjct: 3257 ttttatacatttatgtgacaagtaattccggacggagggagtatg 3301
>gb|DQ175899.1| Hordeum vulgare subsp. vulgare clone 28-36A-RB flanking T-DNA insertion sequence Length = 246 Score = 48.1 bits (24), Expect = 0.040 Identities = 43/48 (89%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 179 tagagatgaatgtatctagacttattttagt-tatagatacattcatt 225 |||| |||||||||||||| | ||||||||| | |||||||||||||| Sbjct: 86 tagatatgaatgtatctagtcatattttagtatttagatacattcatt 39
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Plus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| |||||||||||||||| Sbjct: 11612 gacaagtattttcggacggagggagtat 11639 Score = 48.1 bits (24), Expect = 0.040 Identities = 27/28 (96%) Strand = Plus / Minus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| ||||||||||||||||||||||| Sbjct: 11639 atactccctccgtccgaaaatacttgtc 11612 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Minus Query: 224 ttatgtttatttttaagacaagtatttccggacggagggagtat 267 |||| |||||||| | ||||||||||| |||||| ||||||||| Sbjct: 11554 ttatatttattttgatgacaagtattttcggacgaagggagtat 11511 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 149 aatacgccctccgtccgaaaatacttgtc 177 ||||| |||| |||||||||||||||||| Sbjct: 11510 aatactcccttcgtccgaaaatacttgtc 11538
>gb|BT009606.1| Triticum aestivum clone wre1n.pk0091.d5:fis, full insert mRNA sequence Length = 1469 Score = 48.1 bits (24), Expect = 0.040 Identities = 48/56 (85%) Strand = Plus / Plus Query: 170 tacttgtcctagagatgaatgtatctagacttattttagttatagatacattcatt 225 |||| |||| ||| ||||||||||||||| ||||||| || ||||||||| |||| Sbjct: 1223 tactcgtccaagaaatgaatgtatctagatgtattttaattgtagatacatccatt 1278
>gb|AY951949.1| Triticum monococcum CRT/DRE binding factor 3 (CBF3) gene, complete cds Length = 1971 Score = 48.1 bits (24), Expect = 0.040 Identities = 66/80 (82%) Strand = Plus / Plus Query: 187 aatgtatctagacttattttagttatagatacattcattatgtttatttttaagacaagt 246 |||||||||| | |||||||||| || ||| ||| || |||| ||||| | ||||||| Sbjct: 1461 aatgtatctaaatgtattttagttttaaatatattttttttgttcattttaatgacaagt 1520 Query: 247 atttccggacggagggagta 266 |||| ||||||||| ||||| Sbjct: 1521 attttcggacggagagagta 1540 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctccgtccgaaaatacttgtc 177 ||||||||||||||||||||| Sbjct: 1534 ctccgtccgaaaatacttgtc 1514
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Minus Query: 232 atttttaagacaagtatttccggacggagggagta 266 ||||||||||||||| |||| | |||||||||||| Sbjct: 105054 atttttaagacaagtgtttctgaacggagggagta 105020
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete sequence Length = 129844 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 511 aataataacaatatatattaggt 533 ||||||||||||||||||||||| Sbjct: 93299 aataataacaatatatattaggt 93321
>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone BACR48K02, complete sequence Length = 178530 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 643 catatttacattatttcttatac 665 ||||||||||||||||||||||| Sbjct: 54855 catatttacattatttcttatac 54833
>gb|AC018462.4| Homo sapiens BAC clone RP11-270B14 from 2, complete sequence Length = 189326 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 504 aacagataataataacaatatat 526 ||||||||||||||||||||||| Sbjct: 170495 aacagataataataacaatatat 170517
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete sequence Length = 253771 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 643 catatttacattatttcttatac 665 ||||||||||||||||||||||| Sbjct: 182480 catatttacattatttcttatac 182458
>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 tctttctctatctttccttttct 368 ||||||||||||||||||||||| Sbjct: 100994 tctttctctatctttccttttct 100972
>dbj|AP000568.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B753B2, LL56-APP region, complete sequence Length = 136627 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 346 tctttctctatctttccttttct 368 ||||||||||||||||||||||| Sbjct: 120769 tctttctctatctttccttttct 120747
>emb|CR931792.9| Zebrafish DNA sequence from clone DKEY-180L1 in linkage group 13, complete sequence Length = 163673 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatatta 530 |||||||||||||||||||||| Sbjct: 145786 ataataataacaatatatatta 145765
>gb|AC144644.3| Medicago truncatula clone mth2-14l3, complete sequence Length = 117645 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 ggacggagggagtatgattttt 274 |||||||||||||||||||||| Sbjct: 79306 ggacggagggagtatgattttt 79327
>emb|AL445646.11| Human DNA sequence from clone RP11-217F16 on chromosome 9 Contains a pseudogene similar to part of member RAB7 of RAS oncogene family (RAB7) and part of a ribosomal protein S12 (RPS12) pseudogene, complete sequence Length = 64120 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 644 atatttacattatttcttataccact 669 ||||||||||||||| |||||||||| Sbjct: 28590 atatttacattattttttataccact 28565
>gb|AC112644.3| Homo sapiens 3 BAC RP11-10O22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178521 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 213 agatacattcattatgtttattttta 238 ||||||||||||||| |||||||||| Sbjct: 45838 agatacattcattatttttattttta 45813
>emb|X13580.1|TAAAM254 Wheat alpha-Amy2/54 gene 5'-region Length = 847 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 188 atgtatctagacttattttagttatagatacattcatt 225 |||||||||| |||||||||| |||||||||||||| Sbjct: 94 atgtatctagttgtattttagttctagatacattcatt 57
>gb|AY013754.1| Aegilops tauschii glutathione S-transferase gene, complete cds Length = 2453 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Minus Query: 188 atgtatctagacttattttagttatagatacattcatt 225 ||||||||||| |||||||||| ||||||||| |||| Sbjct: 2005 atgtatctagatgtattttagttctagatacatccatt 1968
>gb|AC104513.8| Homo sapiens 3q BAC RP11-115O24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162500 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 agatacattcattatgtttattttta 238 ||||||||||||||| |||||||||| Sbjct: 21000 agatacattcattatttttattttta 21025
>emb|BX322616.8| Zebrafish DNA sequence from clone DKEY-21K24 in linkage group 25, complete sequence Length = 232304 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatatta 530 |||||||||||||||||||||| Sbjct: 184304 ataataataacaatatatatta 184325
>emb|BX649314.6| Zebrafish DNA sequence from clone DKEYP-111A3 in linkage group 23, complete sequence Length = 170403 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatatta 530 |||||||||||||||||||||| Sbjct: 132472 ataataataacaatatatatta 132493
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 195 tagacttattttagttatagatacat 220 ||||||||||||||||||| |||||| Sbjct: 22382972 tagacttattttagttatatatacat 22382997 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 cctccgtccgaaaatacttgtccta 180 ||||||||| ||||||||||||||| Sbjct: 20085196 cctccgtcccaaaatacttgtccta 20085172 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgatttt 273 ||||||||||||||||||||| Sbjct: 8214214 ggacggagggagtatgatttt 8214194 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 30346914 gacaagtattttgggacggagggagtat 30346887 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 30346887 atactccctccgtcccaaaatacttgtc 30346914 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 19544209 acggagggagtatgattttt 19544190
>gb|AC096554.1| Homo sapiens BAC clone RP11-76I14 from 2, complete sequence Length = 144683 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 204 tttagttatagatacattcatt 225 |||||||||||||||||||||| Sbjct: 73067 tttagttatagatacattcatt 73088
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 195 tagacttattttagttatagatacat 220 ||||||||||||||||||| |||||| Sbjct: 7110 tagacttattttagttatatatacat 7135
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013G02 Length = 163419 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 195 tagacttattttagttatagatacat 220 ||||||||||||||||||| |||||| Sbjct: 80242 tagacttattttagttatatatacat 80267
>dbj|AP001359.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-820L6, complete sequences Length = 221535 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 tttctctatctttccttttctc 369 |||||||||||||||||||||| Sbjct: 49092 tttctctatctttccttttctc 49071
>dbj|AP001924.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-166D19, complete sequence Length = 190360 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 tttctctatctttccttttctc 369 |||||||||||||||||||||| Sbjct: 130731 tttctctatctttccttttctc 130710
>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete sequence Length = 252394 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatatt 529 ||||||||||||||||||||| Sbjct: 115441 ataataataacaatatatatt 115421
>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence Length = 250053 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 gatacattcattatgtttattttta 238 |||||||||||||| |||||||||| Sbjct: 51003 gatacattcattatctttattttta 50979
>gb|AC149720.2| Bos taurus BAC CH240-248M14 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 180339 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 352 tctatctttccttttctcctt 372 ||||||||||||||||||||| Sbjct: 52445 tctatctttccttttctcctt 52465
>gb|AC150912.3| Pan troglodytes BAC clone CH251-18B3 from chromosome 7, complete sequence Length = 170021 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 100330 ttccttttctccttccgagaa 100350
>gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA) gene, complete cds Length = 43944 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 660 ttataccacttgatcttttaatttt 684 ||||||||||| ||||||||||||| Sbjct: 32853 ttataccacttcatcttttaatttt 32829
>gb|AC147132.3| Mus musculus BAC clone RP24-189K3 from chromosome 7, complete sequence Length = 189225 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ataactatcaaatgtaatatcttcc 72 |||| |||||||||||||||||||| Sbjct: 16117 ataattatcaaatgtaatatcttcc 16141
>gb|AC145905.4| Pan troglodytes BAC clone RP43-9I21 from 7, complete sequence Length = 187893 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcctctgtgaagagaagccc 41 ||||||||||||||||||||| Sbjct: 146993 ctcctctgtgaagagaagccc 146973
>gb|AC146159.2| Pan troglodytes BAC clone RP43-36O19 from 7, complete sequence Length = 163991 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ctcctctgtgaagagaagccc 41 ||||||||||||||||||||| Sbjct: 93113 ctcctctgtgaagagaagccc 93093
>gb|AC129316.4| Mus musculus BAC clone RP23-415J6 from chromosome 7, complete sequence Length = 190374 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ataactatcaaatgtaatatcttcc 72 |||| |||||||||||||||||||| Sbjct: 145019 ataattatcaaatgtaatatcttcc 145043
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgatttt 273 ||||||||||||||||||||| Sbjct: 178335 ggacggagggagtatgatttt 178315
>gb|AC146076.2| Pan troglodytes BAC clone RP43-15J5 from 7, complete sequence Length = 161297 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 160806 ttccttttctccttccgagaa 160786
>gb|AC007276.3| Homo sapiens BAC clone RP11-226O1 from 7, complete sequence Length = 172573 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 105797 ttccttttctccttccgagaa 105777
>gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete sequence Length = 115040 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 ggacggagggagtatgatttt 273 ||||||||||||||||||||| Sbjct: 53146 ggacggagggagtatgatttt 53166
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 atacattcattatgtttattt 235 ||||||||||||||||||||| Sbjct: 231383 atacattcattatgtttattt 231403 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 catcacaaacagataataat 516 |||||||||||||||||||| Sbjct: 185028 catcacaaacagataataat 185047
>emb|AL121958.6|HSDJ71H19 Human DNA sequence from clone RP1-71H19 on chromosome 6 Contains part of the PRIM2A gene for primase polypeptide 2A (58kD) and a novel gene, complete sequence Length = 138411 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 215 atacattcattatgtttatttttaa 239 ||||||| ||||||||||||||||| Sbjct: 41356 atacatttattatgtttatttttaa 41332
>emb|AL133379.3| Human DNA sequence from clone RP1-230I3 on chromosome 6q22.1-22.33 Contains the 3' end of the gene for a novel protein similar to FLJ13018, complete sequence Length = 111764 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 attttagttatagatacattc 222 ||||||||||||||||||||| Sbjct: 86551 attttagttatagatacattc 86531
>emb|AL049564.11|HSDJ808O4 Human DNA sequence from clone RP4-808O4 on chromosome Xq11.1-12 Contains the 5' end of the AR gene for androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease), a poly(A) binding protein, nuclear 1 (PABPN1) pseudogene and two CpG islands, complete sequence Length = 139033 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 418 aaatagttacatatacaagtc 438 ||||||||||||||||||||| Sbjct: 131752 aaatagttacatatacaagtc 131772
>gb|AC027667.20| Homo sapiens 12 BAC RP11-972L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157801 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 80163 ttccttttctccttccgagaa 80183
>gb|AC182461.3| Pan troglodytes BAC clone CH251-673H10 from chromosome 6, complete sequence Length = 188415 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 215 atacattcattatgtttatttttaa 239 ||||||| ||||||||||||||||| Sbjct: 69037 atacatttattatgtttatttttaa 69061
>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence Length = 120704 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgatttt 273 ||||||||||||||||||||| Sbjct: 603 ggacggagggagtatgatttt 583
>emb|BX649544.12| Zebrafish DNA sequence from clone CH211-123F23 in linkage group 9, complete sequence Length = 168473 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatatt 529 ||||||||||||||||||||| Sbjct: 79226 ataataataacaatatatatt 79206
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 ttatttttaagacaagtattt 250 ||||||||||||||||||||| Sbjct: 861660 ttatttttaagacaagtattt 861640
>gb|AC104041.5| Homo sapiens chromosome 15, clone CTD-2034I4, complete sequence Length = 188519 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 aaacagataataataacaata 523 ||||||||||||||||||||| Sbjct: 150845 aaacagataataataacaata 150825 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 aaacagataataataacaata 523 ||||||||||||||||||||| Sbjct: 105002 aaacagataataataacaata 104982
>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence Length = 189732 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 aaacagataataataacaata 523 ||||||||||||||||||||| Sbjct: 17920 aaacagataataataacaata 17900
>emb|BX537118.12| Zebrafish DNA sequence from clone CH211-202N8, complete sequence Length = 197161 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatatt 529 ||||||||||||||||||||| Sbjct: 64536 ataataataacaatatatatt 64556
>dbj|AB169337.1| Macaca fascicularis testis cDNA, clone: QtsA-19128, similar to human hypothetical protein FLJ32949 (FLJ32949), mRNA, RefSeq: NM_173812.3 Length = 1868 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 831 ttccttttctccttccgagaa 811
>gb|AC148835.3| Pan troglodytes BAC clone CH251-25M11 from chromosome 7, complete sequence Length = 154596 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 100995 ttccttttctccttccgagaa 101015
>gb|AF282242.1|AF282242 Plasmodium falciparum strain Dd2 chloroquine resistance marker protein gene, complete cds Length = 10863 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 atacattcattatgtttattt 235 ||||||||||||||||||||| Sbjct: 233 atacattcattatgtttattt 213
>gb|AF282241.1|AF282241 Plasmodium falciparum strain K1 chloroquine resistance marker protein mRNA, complete cds Length = 10833 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 atacattcattatgtttattt 235 ||||||||||||||||||||| Sbjct: 233 atacattcattatgtttattt 213
>gb|AF169404.1|AF169404 Plasmodium falciparum chloroquine resistance marker protein gene, complete cds Length = 10919 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 atacattcattatgtttattt 235 ||||||||||||||||||||| Sbjct: 233 atacattcattatgtttattt 213
>gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D20 map 3p, complete sequence Length = 169199 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 660 ttataccacttgatcttttaatttt 684 ||||||||||| ||||||||||||| Sbjct: 126437 ttataccacttcatcttttaatttt 126413
>dbj|AP004233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0065J17 Length = 139014 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 cctccgtccgaaaatacttgtccta 180 ||||||||| ||||||||||||||| Sbjct: 83158 cctccgtcccaaaatacttgtccta 83134
>gb|AE014848.1| Plasmodium falciparum 3D7 chromosome 12, section 5 of 9 of the complete sequence Length = 250707 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 509 ataataataacaatatatattaggt 533 |||||||||| |||||||||||||| Sbjct: 59106 ataataataataatatatattaggt 59082
>gb|AC096550.2| Homo sapiens BAC clone RP11-20F13 from 2, complete sequence Length = 101034 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ttatttttaagacaagtattt 250 ||||||||||||||||||||| Sbjct: 27204 ttatttttaagacaagtattt 27224
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgatttt 273 ||||||||||||||||||||| Sbjct: 131932 ggacggagggagtatgatttt 131912
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgatttt 273 ||||||||||||||||||||| Sbjct: 8145 ggacggagggagtatgatttt 8125
>gb|AC005826.1|AC005826 Homo sapiens clone SCb-41A3 from 7p14-15, complete sequence Length = 177585 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 16063 ttccttttctccttccgagaa 16083
>emb|BX000437.7| Zebrafish DNA sequence from clone DKEY-106O5 in linkage group 5, complete sequence Length = 178961 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatatt 529 ||||||||||||||||||||| Sbjct: 65569 ataataataacaatatatatt 65549
>gb|AC006379.2|AC006379 Homo sapiens BAC clone RP11-456N16 from 7p15.1-p13, complete sequence Length = 202719 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 65616 ttccttttctccttccgagaa 65636
>gb|AC134607.5| Mus musculus BAC clone RP23-65J2 from chromosome 9, complete sequence Length = 230480 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 523 atatattaggtaagcaagttg 543 ||||||||||||||||||||| Sbjct: 50588 atatattaggtaagcaagttg 50608
>gb|AC004800.1|AC004800 Homo sapiens chromosome 7 clone UWGC:g3586a230 from 7p14-15, complete sequence Length = 43351 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ttccttttctccttccgagaa 379 ||||||||||||||||||||| Sbjct: 31118 ttccttttctccttccgagaa 31138
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence Length = 189097 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 660 ttataccacttgatcttttaatttt 684 ||||||||||| ||||||||||||| Sbjct: 167669 ttataccacttcatcttttaatttt 167693
>gb|AC157745.2| Xenopus tropicalis clone ISB1-79H24, complete sequence Length = 82063 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tatctagacttattttagtt 210 |||||||||||||||||||| Sbjct: 58574 tatctagacttattttagtt 58555
>ref|XM_639858.1| Dictyostelium discoideum hypothetical protein (DDB0217083), partial mRNA Length = 1974 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 1490 ataataataacaatatatat 1509
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tctttctctatctttccttt 365 |||||||||||||||||||| Sbjct: 813899 tctttctctatctttccttt 813918
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 757427 ataataataacaatatatat 757446
>gb|AC133006.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072N24 map C61883S, complete sequence Length = 163337 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 125764 gacaagtattttgggacggagggagtat 125737 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 125737 atactccctccgtcccaaaatacttgtc 125764
>gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C5, complete sequence Length = 126762 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 66375 ataataataacaatatatat 66394
>gb|AC115968.10| Mus musculus chromosome 1, clone RP24-72P6, complete sequence Length = 229959 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 atctttctctatctttccttttct 368 ||||||||| |||||||||||||| Sbjct: 145775 atctttctcaatctttccttttct 145798
>gb|AY628310.1| Patelloida sp. ESU 6 haplotype Christmas C cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 587 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 aacagataataataacaata 523 |||||||||||||||||||| Sbjct: 518 aacagataataataacaata 499
>gb|AY628309.1| Patelloida sp. ESU 6 haplotype Christmas B cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 590 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 aacagataataataacaata 523 |||||||||||||||||||| Sbjct: 518 aacagataataataacaata 499
>gb|AY628308.1| Patelloida sp. ESU 6 haplotype Christmas A cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 585 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 aacagataataataacaata 523 |||||||||||||||||||| Sbjct: 513 aacagataataataacaata 494
>ref|XM_419032.1| PREDICTED: Gallus gallus similar to Aromatic-L-amino-acid decarboxylase (AADC) (DOPA decarboxylase) (DDC) (LOC420947), mRNA Length = 2182 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 585 tcttccctagccaatcaagcttgacagt 612 |||||||||||||||| ||| ||||||| Sbjct: 373 tcttccctagccaatctagcatgacagt 346
>gb|BC070806.1| Xenopus laevis hypothetical protein MGC83879, mRNA (cDNA clone MGC:83879 IMAGE:6857015), complete cds Length = 3504 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gaggtgtttttctcctctgt 29 |||||||||||||||||||| Sbjct: 1658 gaggtgtttttctcctctgt 1639
>gb|BT025388.1| Bos taurus mitochondrial ribosomal protein L35 (MRPL35), nuclear gene encoding mitochondrial protein, mRNA, incomplete 5' cds Length = 722 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 646 atttacattatttcttataccacttgatcttt 677 |||||||| || ||||||||||||| |||||| Sbjct: 660 atttacatcatgtcttataccacttcatcttt 629
>ref|XM_592911.2| PREDICTED: Bos taurus similar to mitochondrial ribosomal protein L35 (LOC540278), mRNA Length = 725 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 646 atttacattatttcttataccacttgatcttt 677 |||||||| || ||||||||||||| |||||| Sbjct: 663 atttacatcatgtcttataccacttcatcttt 632
>ref|NM_053163.1| Mus musculus mitochondrial ribosomal protein L36 (Mrpl36), mRNA Length = 917 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 291 caaaaccaaaggtgtcatca 310
>gb|AC087729.2| Pan troglodytes clone RP43-143F17, complete sequence Length = 208928 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tctttctctatctttccttt 365 |||||||||||||||||||| Sbjct: 115340 tctttctctatctttccttt 115359
>gb|DQ491003.1| Chlorella virus AR158 ctg_1047243734156 genomic sequence Length = 344691 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 actatcaaatgtaatatctt 70 |||||||||||||||||||| Sbjct: 194104 actatcaaatgtaatatctt 194085
>gb|AC147913.2| Xenopus tropicalis clone CH216-83K3, complete sequence Length = 176651 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctatctttccttttctcctt 372 |||||||||||||||||||| Sbjct: 48574 ctatctttccttttctcctt 48555
>gb|AC164405.4| Mus musculus chromosome 3, clone RP24-286C1, complete sequence Length = 159535 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tgtttttctcctctgtgaag 33 |||||||||||||||||||| Sbjct: 54829 tgtttttctcctctgtgaag 54810
>gb|AC161762.4| Mus musculus BAC clone RP23-371K18 from chromosome 7, complete sequence Length = 207870 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 509 ataataataacaatatatattagg 532 ||||||||||||||| |||||||| Sbjct: 117189 ataataataacaataaatattagg 117212
>gb|AC106873.3| Homo sapiens BAC clone RP11-374M7 from 7, complete sequence Length = 99596 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tctttctctatctttccttt 365 |||||||||||||||||||| Sbjct: 11989 tctttctctatctttccttt 12008
>gb|AC129324.4| Mus musculus BAC clone RP23-253G24 from chromosome 18, complete sequence Length = 166990 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 acccagcagattggtttctt 588 |||||||||||||||||||| Sbjct: 57984 acccagcagattggtttctt 58003
>gb|AC147133.2| Pan troglodytes BAC clone CH251-372A19 from Y, complete sequence Length = 192074 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 atctttctctatctttccttttct 368 |||||||||| ||||||||||||| Sbjct: 162268 atctttctctctctttccttttct 162291
>gb|AC146269.3| Pan troglodytes BAC clone RP43-29B18 from 7, complete sequence Length = 178898 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ttgagatctttctctatctt 359 |||||||||||||||||||| Sbjct: 57566 ttgagatctttctctatctt 57585
>gb|AC136611.2| Homo sapiens chromosome 16 clone RP11-159J3, complete sequence Length = 158324 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tctatctttccttttctcct 371 |||||||||||||||||||| Sbjct: 133917 tctatctttccttttctcct 133898
>gb|AC092830.7| Homo sapiens 12 BAC RP11-146L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164969 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccttgagatctttctctatc 357 |||||||||||||||||||| Sbjct: 51856 ccttgagatctttctctatc 51837
>gb|AC124460.5| Mus musculus BAC clone RP24-142P7 from chromosome 13, complete sequence Length = 184155 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tctttctctatctttccttt 365 |||||||||||||||||||| Sbjct: 118523 tctttctctatctttccttt 118504
>emb|CR339048.12| Zebrafish DNA sequence from clone DKEY-27L15 in linkage group 17, complete sequence Length = 128760 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 74292 ataataataacaatatatat 74273
>gb|AC123520.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034O04, complete sequence Length = 164882 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 77990 acggagggagtatgattttt 77971
>ref|XM_961057.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0795w) partial mRNA Length = 5043 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 1505 ataataataacaatatatat 1524
>gb|AC004927.2| Homo sapiens PAC clone RP5-910I17 from 7, complete sequence Length = 80105 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 tcatcacaaacagataataa 515 |||||||||||||||||||| Sbjct: 6466 tcatcacaaacagataataa 6447
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence Length = 82665 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 69813 ggacggagggagtatgattt 69832
>gb|AC115943.8| Mus musculus chromosome 3, clone RP24-555H23, complete sequence Length = 138723 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 tgtttttctcctctgtgaag 33 |||||||||||||||||||| Sbjct: 10181 tgtttttctcctctgtgaag 10162
>gb|AC135462.22| Medicago truncatula clone mth2-35o17, complete sequence Length = 118383 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 55824 ggacggagggagtatgattt 55843
>gb|AC137830.6| Medicago truncatula clone mth2-33g10, complete sequence Length = 113855 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 74089 ggacggagggagtatgattt 74070
>gb|AC148176.11| Medicago truncatula clone mth2-3j15, complete sequence Length = 119267 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 107712 ggacggagggagtatgattt 107693
>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence Length = 130555 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 84761 ggacggagggagtatgattt 84742
>gb|AC009030.10| Homo sapiens chromosome 16 clone RP11-13G6, complete sequence Length = 189379 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tctatctttccttttctcct 371 |||||||||||||||||||| Sbjct: 49342 tctatctttccttttctcct 49323
>gb|DQ456871.1| Hordeum vulgare glucose-6-phosphate isomerase (GPI) mRNA, complete cds Length = 2421 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||||||||| | |||||||| Sbjct: 2133 gacaagtatttccggacagggggagtat 2106
>emb|AL713866.4| Human DNA sequence from clone RP11-309H21 on chromosome 1 Contains a processed pseudogene similar to heterogeneous nuclear ribonucleoprotein A1 (HNRPA1), complete sequence Length = 142390 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 agataataataacaatatatatta 530 ||||||||| |||||||||||||| Sbjct: 91516 agataataaaaacaatatatatta 91493
>emb|AL450468.6| Human DNA sequence from clone RP11-195M16 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the CSF1 gene for colony stimulating factor 1 (macrophage), complete sequence Length = 116796 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 504 aacagataataataacaata 523 |||||||||||||||||||| Sbjct: 65334 aacagataataataacaata 65353
>emb|AL391005.9| Human DNA sequence from clone RP11-288A5 on chromosome 10 Contains a forkhead box I1 (FOXI1) pseudogene and a CpG island, complete sequence Length = 163778 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tctttctctatctttccttttctc 369 ||||||||| |||||||||||||| Sbjct: 144223 tctttctctctctttccttttctc 144200
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 148583 ataataataacaatatatat 148602
>gb|AF527606.1| Hordeum vulgare iron/ascorbate-dependent oxidoreductase (Hcp1) mRNA, complete cds Length = 1360 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 aatacgccctccgtccgaaaatacttgt 176 ||||| |||||| ||||||||||||||| Sbjct: 1294 aatactccctccatccgaaaatacttgt 1321
>gb|BT009083.1| Triticum aestivum clone wkm1c.pk0004.c7:fis, full insert mRNA sequence Length = 1186 Score = 40.1 bits (20), Expect = 9.7 Identities = 60/72 (83%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 155 ccctccgtccgaaaatacttgtcctagagatgaatgtatctagacttatttt-agttata 213 |||||| |||| |||||| |||| ||| || ||||||||| || |||||| |||| || Sbjct: 980 ccctccatccggaaatacctgtcggagaaatagatgtatctaaacgtatttttagttcta 921 Query: 214 gatacattcatt 225 |||||||||||| Sbjct: 920 gatacattcatt 909
>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5 Length = 348174 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 330520 ataataataacaatatatat 330539
>gb|DQ123819.1| Triticum turgidum floral homeotic homeoallele (q) gene, complete sequence Length = 3321 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 235 tttaagacaagtatttccggacggagggagta 266 ||||||||||||| ||| | |||||||||||| Sbjct: 2867 tttaagacaagtaattcagaacggagggagta 2836
>emb|AL954693.5| Zebrafish DNA sequence from clone BUSM1-146N9 in linkage group 14 Contains part of a novel gene similar to human GCN1 (general control of amino-acid synthesis 1-like 1 (yeast)), part of anovel gene similar to human RAB35 (member of RAS oncogene family) and four CpG islands, complete sequence Length = 107343 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 504 aacagataataataacaatatatattag 531 |||| |||||||||||||||| |||||| Sbjct: 73685 aacaaataataataacaatatttattag 73712
>emb|AL732622.4| Mouse DNA sequence from clone RP23-277G3 on chromosome 11 Contains part of the Ebf1 gene for early B-cell factor 1, complete sequence Length = 126781 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 39004 ataataataacaatatatat 39023
>gb|DQ090916.1| Bison bison mitochondrial ribosomal protein L35 gene, partial cds; nuclear gene for mitochondrial product Length = 467 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 646 atttacattatttcttataccacttgatcttt 677 |||||||| || ||||||||||||| |||||| Sbjct: 164 atttacatcatgtcttataccacttcatcttt 133
>gb|DQ068273.1| Bos taurus mitochondrial ribosomal protein L35 gene, partial cds; nuclear gene for mitochondrial product Length = 467 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 646 atttacattatttcttataccacttgatcttt 677 |||||||| || ||||||||||||| |||||| Sbjct: 164 atttacatcatgtcttataccacttcatcttt 133
>emb|BX510343.8| Zebrafish DNA sequence from clone CH211-150K4 in linkage group 1, complete sequence Length = 155281 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 59045 ataataataacaatatatat 59064
>gb|BC009166.1| Mus musculus mitochondrial ribosomal protein L36, mRNA (cDNA clone MGC:6934 IMAGE:2811744), complete cds Length = 917 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 291 caaaaccaaaggtgtcatca 310
>gb|AC092954.4| Homo sapiens 3 BAC RP11-368I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166452 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 aataataacaatatatatta 530 |||||||||||||||||||| Sbjct: 52576 aataataacaatatatatta 52595
>gb|AC012229.8| Homo sapiens chromosome 15, clone RP11-182L7, complete sequence Length = 119723 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 aaacagataataataacaat 522 |||||||||||||||||||| Sbjct: 21179 aaacagataataataacaat 21198
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 82316 ggacggagggagtatgattt 82297
>dbj|BS000642.2| Pan troglodytes chromosome Y clone: PTB-307G08, complete sequence Length = 162472 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 atctttctctatctttccttttct 368 |||||||||| ||||||||||||| Sbjct: 31655 atctttctctctctttccttttct 31678
>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete sequence Length = 180569 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 tcatcacaaacagataataa 515 |||||||||||||||||||| Sbjct: 53930 tcatcacaaacagataataa 53949
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 atctttctctatctttccttttct 368 |||||||||| ||||||||||||| Sbjct: 18875751 atctttctctctctttccttttct 18875728
>gb|AC104304.2| Homo sapiens chromosome 3 clone RP11-509I21, complete sequence Length = 202933 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 cttattttagttatagatacattc 222 |||||||| ||||||||||||||| Sbjct: 126649 cttatttttgttatagatacattc 126672
>gb|DQ207420.1| Acinetobacter lwoffii strain CIP 64.10 rpoL-rpoB spacer genomic sequence Length = 308 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 ttcattatgtttatttttaa 239 |||||||||||||||||||| Sbjct: 147 ttcattatgtttatttttaa 128
>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence Length = 186105 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 caagcttgacagtgtagctt 619 |||||||||||||||||||| Sbjct: 20497 caagcttgacagtgtagctt 20478
>dbj|AK131604.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110004A21 product:mitochondrial ribosomal protein L36, full insert sequence Length = 888 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 280 caaaaccaaaggtgtcatca 299
>dbj|AK131601.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110001A15 product:mitochondrial ribosomal protein L36, full insert sequence Length = 889 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 281 caaaaccaaaggtgtcatca 300
>dbj|AK131597.1| Mus musculus adult male heart cDNA, RIKEN full-length enriched library, clone:1010001M03 product:mitochondrial ribosomal protein L36, full insert sequence Length = 898 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 283 caaaaccaaaggtgtcatca 302
>gb|U34612.1|MMCOL18A07 Mus musculus alpha-1(XVIII) collagen (COL18A1) gene, exon 10-30 Length = 12794 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 caagcttgacagtgtagctt 619 |||||||||||||||||||| Sbjct: 4806 caagcttgacagtgtagctt 4787
>gb|AC091214.20| Homo sapiens 12q BAC RP11-13F9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143331 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 tattcccacccagcagattg 581 |||||||||||||||||||| Sbjct: 52443 tattcccacccagcagattg 52424
>gb|AC010631.6| Homo sapiens chromosome 5 clone CTD-2282P23, complete sequence Length = 115626 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tctttctctatctttccttttctc 369 ||||||||| |||||||||||||| Sbjct: 114028 tctttctctctctttccttttctc 114051
>gb|AC079230.6| Homo sapiens BAC clone RP11-292F20 from 4, complete sequence Length = 163545 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 aaaatacttgtcctagagat 185 |||||||||||||||||||| Sbjct: 86882 aaaatacttgtcctagagat 86863
>gb|AC099517.2| Homo sapiens chromosome 5 clone RP11-5H14, complete sequence Length = 150438 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 atagatacattcattatgtttatt 234 ||||||||||||||||| |||||| Sbjct: 132318 atagatacattcattatctttatt 132341
>gb|AC099326.1| Homo sapiens chromosome 3 clone RP11-7B12, complete sequence Length = 152772 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tttatttttaagacaagtat 248 |||||||||||||||||||| Sbjct: 46457 tttatttttaagacaagtat 46438
>gb|BC103008.1| Bos taurus cDNA clone IMAGE:7948820, partial cds Length = 732 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 646 atttacattatttcttataccacttgatcttt 677 |||||||| || ||||||||||||| |||||| Sbjct: 661 atttacatcatgtcttataccacttcatcttt 630
>gb|AC023950.6| Homo sapiens chromosome 11, clone RP11-808N1, complete sequence Length = 211464 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 ccacttggaattcaggcagaggta 94 |||||||||||||||| ||||||| Sbjct: 74444 ccacttggaattcaggtagaggta 74421
>gb|AC087616.3| Homo sapiens chromosome 11, clone RP11-258C7, complete sequence Length = 177939 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ccacttggaattcaggcagaggta 94 |||||||||||||||| ||||||| Sbjct: 7504 ccacttggaattcaggtagaggta 7527
>dbj|AK160778.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110097P16 product:mitochondrial ribosomal protein L36, full insert sequence Length = 888 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 292 caaaaccaaaggtgtcatca 311
>gb|AC008958.7| Homo sapiens chromosome 5 clone CTD-2353N24, complete sequence Length = 109526 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 ctttctctatctttccttttctccttcc 374 |||||||| |||||| |||||||||||| Sbjct: 89383 ctttctctttctttctttttctccttcc 89410
>gb|AC092357.2| Homo sapiens chromosome 16 clone RP11-332P24, complete sequence Length = 191768 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tatgtttatttttaagacaa 244 |||||||||||||||||||| Sbjct: 2755 tatgtttatttttaagacaa 2736
>gb|AC124915.5| Homo sapiens chromosome 3 clone RP11-717N7, complete sequence Length = 183748 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tttatttttaagacaagtat 248 |||||||||||||||||||| Sbjct: 153670 tttatttttaagacaagtat 153651
>dbj|AK039263.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330009E13 product:unclassifiable, full insert sequence Length = 2673 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 attttagttatagatacatt 221 |||||||||||||||||||| Sbjct: 386 attttagttatagatacatt 367
>dbj|AK075780.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810021B11 product:mitochondrial ribosomal protein L36, full insert sequence Length = 451 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 263 caaaaccaaaggtgtcatca 282
>gb|AC008957.7|AC008957 Homo sapiens chromosome 5 clone CTD-2353F22, complete sequence Length = 89354 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tctttctctatctttccttttctc 369 ||||||||| |||||||||||||| Sbjct: 76269 tctttctctctctttccttttctc 76246
>emb|BX784031.5| Zebrafish DNA sequence from clone DKEY-174E15 in linkage group 21, complete sequence Length = 231014 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 159561 ataataataacaatatatat 159542
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 27152713 acggagggagtatgattttt 27152694
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 10031983 gacaagtattttgggacggagggagtat 10031956 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 10031956 atactccctccgtcccaaaatacttgtc 10031983 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 5868106 acggagggagtatgattttt 5868087
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 17289963 ggacggagggagtatgattt 17289982
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 5767851 ggacggagggagtatgattt 5767832 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 taatacgccctccgtccgaaaata 171 ||||||||||||||||| |||||| Sbjct: 4275779 taatacgccctccgtcctaaaata 4275802
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 18491508 acggagggagtatgattttt 18491489
>gb|AC117578.9| Mus musculus chromosome 5, clone RP23-36I22, complete sequence Length = 213371 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 acaaccttgagatctttctc 353 |||||||||||||||||||| Sbjct: 175671 acaaccttgagatctttctc 175652
>gb|AC018558.6| Homo sapiens chromosome 16 clone RP11-80F22, complete sequence Length = 151051 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 tatgtttatttttaagacaa 244 |||||||||||||||||||| Sbjct: 53018 tatgtttatttttaagacaa 52999
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence Length = 254733 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 39220 ataataataacaatatatat 39239
>dbj|AP004362.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E04 Length = 146710 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 12661 acggagggagtatgattttt 12642
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 135206 atactccctccgtcccaaaatacttgtc 135233 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 135233 gacaagtattttgggacggagggagtat 135206
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 32641 gacaagtattttgggacggagggagtat 32614 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 32614 atactccctccgtcccaaaatacttgtc 32641
>gb|AC110749.12| Homo sapiens chromosome 17, clone CTD-2303K11, complete sequence Length = 49133 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tctttctctatctttccttttctc 369 ||||||||| |||||||||||||| Sbjct: 42976 tctttctctttctttccttttctc 42953
>gb|AC016674.9| Homo sapiens BAC clone RP11-36C8 from 2, complete sequence Length = 69948 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 224 ttatgtttatttttaagaca 243 |||||||||||||||||||| Sbjct: 20948 ttatgtttatttttaagaca 20929
>gb|AC115857.16| Mus musculus chromosome 5, clone RP24-280I13, complete sequence Length = 163661 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 692 tgttacctgtaatatctttg 711 |||||||||||||||||||| Sbjct: 45963 tgttacctgtaatatctttg 45944
>gb|AC130449.2| Homo sapiens chromosome 16 clone CTA-233A7, complete sequence Length = 175104 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tctatctttccttttctcct 371 |||||||||||||||||||| Sbjct: 166321 tctatctttccttttctcct 166340
>gb|AC146450.5| Pan troglodytes BAC clone clone CH251-552K12 from y, complete sequence Length = 172072 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 atctttctctatctttccttttct 368 |||||||||| ||||||||||||| Sbjct: 77749 atctttctctctctttccttttct 77772
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 taatacgccctccgtccgaaaata 171 ||||||||||||||||| |||||| Sbjct: 38573 taatacgccctccgtcctaaaata 38596
>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085C03 Length = 188905 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 74391 acggagggagtatgattttt 74372
>emb|BX323454.3| Zebrafish DNA sequence from clone CH211-263F9 in linkage group 10, complete sequence Length = 126181 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 82683 ataataataacaatatatat 82702
>emb|AL691421.9| Mouse DNA sequence from clone RP23-21A16 on chromosome X, complete sequence Length = 221461 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 aaacagataataataacaatatat 526 |||||||||||||| ||||||||| Sbjct: 52193 aaacagataataattacaatatat 52170
>emb|BX000487.7| Zebrafish DNA sequence from clone BUSM1-162F22 in linkage group 20, complete sequence Length = 105024 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 28753 ataataataacaatatatat 28734
>gb|AC114558.18| Mus musculus chromosome 8, clone RP23-47G19, complete sequence Length = 262311 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 tatattaggtaagcaagttg 543 |||||||||||||||||||| Sbjct: 78959 tatattaggtaagcaagttg 78940
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 122476 ggacggagggagtatgattt 122457
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 21996 ggacggagggagtatgattt 21977
>gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complete sequence Length = 170787 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 atatatattaggtaagcaag 540 |||||||||||||||||||| Sbjct: 65364 atatatattaggtaagcaag 65345
>dbj|AK102017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033080F19, full insert sequence Length = 1205 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 875 atactccctccgtcccaaaatacttgtc 902 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 902 gacaagtattttgggacggagggagtat 875
>gb|AC154499.2| Mus musculus BAC clone RP23-205I1 from 14, complete sequence Length = 202019 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 acttgtcctagagatgaatg 190 |||||||||||||||||||| Sbjct: 49923 acttgtcctagagatgaatg 49904
>gb|AC154266.2| Mus musculus BAC clone RP24-321J24 from 13, complete sequence Length = 183555 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 127467 caaaaccaaaggtgtcatca 127486
>gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y, complete sequence Length = 202354 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 atctttctctatctttccttttct 368 |||||||||| ||||||||||||| Sbjct: 70815 atctttctctctctttccttttct 70792
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tctttctctatctttccttttctc 369 ||||||||| |||||||||||||| Sbjct: 277546 tctttctctttctttccttttctc 277569
>emb|CR354391.7| Zebrafish DNA sequence from clone CH211-256L9 in linkage group 20, complete sequence Length = 92464 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 5485 ataataataacaatatatat 5466
>emb|BX649312.6| Zebrafish DNA sequence from clone DKEY-170M15 in linkage group 20, complete sequence Length = 162661 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 150241 ataataataacaatatatat 150222
>emb|BX936376.6| Zebrafish DNA sequence from clone CH211-82K12 in linkage group 18, complete sequence Length = 107736 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 55614 ataataataacaatatatat 55595
>gb|AC102364.5| Mus musculus chromosome 9, clone RP23-106P6, complete sequence Length = 208404 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 acacataattgaacgcattg 143 |||||||||||||||||||| Sbjct: 171631 acacataattgaacgcattg 171650
>emb|BX284690.3| Mouse DNA sequence from clone RP24-422L8 on chromosome X, complete sequence Length = 87350 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 645 tatttacattatttcttata 664 |||||||||||||||||||| Sbjct: 58461 tatttacattatttcttata 58480
>gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.215_E_13, complete sequence Length = 147416 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 ctttctctatctttccttttctccttcc 374 |||||||| ||||||| ||||||||||| Sbjct: 117983 ctttctctgtctttccctttctccttcc 118010
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ggacggagggagtatgattt 272 |||||||||||||||||||| Sbjct: 17299003 ggacggagggagtatgattt 17299022
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 150 atacgccctccgtccgaaaatacttgtc 177 |||| |||||||||| |||||||||||| Sbjct: 10103653 atactccctccgtcccaaaatacttgtc 10103680 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 240 gacaagtatttccggacggagggagtat 267 ||||||||||| ||||||||||||||| Sbjct: 10103680 gacaagtattttgggacggagggagtat 10103653 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 5934583 acggagggagtatgattttt 5934564
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 27078313 acggagggagtatgattttt 27078294
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 3524 acggagggagtatgattttt 3543
>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145816 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acggagggagtatgattttt 274 |||||||||||||||||||| Sbjct: 91612 acggagggagtatgattttt 91593
>gb|BC040220.1| Homo sapiens cDNA clone IMAGE:4822188 Length = 3351 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 ccacttggaattcaggcagaggta 94 |||||||||||||||| ||||||| Sbjct: 68 ccacttggaattcaggtagaggta 91
>emb|BX005295.21| Zebrafish DNA sequence from clone CH211-181P19, complete sequence Length = 131528 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 95984 ataataataacaatatatat 96003
>gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, complete sequence Length = 234594 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ctttctctatctttcctttt 366 |||||||||||||||||||| Sbjct: 40690 ctttctctatctttcctttt 40671 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ctttctctatctttcctttt 366 |||||||||||||||||||| Sbjct: 28084 ctttctctatctttcctttt 28103
>emb|AL672232.23| Mouse DNA sequence from clone RP23-367M14 on chromosome X, complete sequence Length = 202689 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 attttagttatagatacatt 221 |||||||||||||||||||| Sbjct: 132407 attttagttatagatacatt 132388
>emb|AL117191.6|CNS01DRG Human chromosome 14 DNA sequence BAC C-2303G14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155307 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 ctagcaaagttgaaacaccagttt 468 |||||||||||||| ||||||||| Sbjct: 11729 ctagcaaagttgaaccaccagttt 11752
>emb|AL049875.2|CNS0000O Human chromosome 14 DNA sequence BAC R-111A21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163118 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 ctagcaaagttgaaacaccagttt 468 |||||||||||||| ||||||||| Sbjct: 161885 ctagcaaagttgaaccaccagttt 161908
>emb|AL928966.3| Mouse DNA sequence from clone RP24-388A9 on chromosome 2, complete sequence Length = 173369 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 atcaaatgtaatatcttcca 73 |||||||||||||||||||| Sbjct: 75213 atcaaatgtaatatcttcca 75194
>emb|X53421.1|DVCHOS18 D. virilis s18, s15, s19, s16 chorion protein genes Length = 9051 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 6552 ataataataacaatatatat 6533
>gb|AC103936.9| Mus musculus chromosome 9, clone RP24-361K14, complete sequence Length = 184968 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 acacataattgaacgcattg 143 |||||||||||||||||||| Sbjct: 39157 acacataattgaacgcattg 39176
>gb|AC002396.1| Arabidopsis thaliana chromosome I BAC F3I6 genomic sequence, complete sequence Length = 122358 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 ataataataacaatatatat 528 |||||||||||||||||||| Sbjct: 22719 ataataataacaatatatat 22738
>dbj|AB049655.1| Mus musculus MRPL36 mRNA for mitochondrial ribosomal protein L36 (L36mt), complete cds Length = 409 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 caaaaccaaaggtgtcatca 501 |||||||||||||||||||| Sbjct: 257 caaaaccaaaggtgtcatca 276 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,307,422 Number of Sequences: 3902068 Number of extensions: 9307422 Number of successful extensions: 276289 Number of sequences better than 10.0: 238 Number of HSP's better than 10.0 without gapping: 242 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 272312 Number of HSP's gapped (non-prelim): 3966 length of query: 711 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 688 effective length of database: 17,143,297,704 effective search space: 11794588820352 effective search space used: 11794588820352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
