ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63j02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104932.1| Zea mays PCO147149 mRNA sequence Length = 2304 Score = 276 bits (139), Expect = 7e-71 Identities = 307/363 (84%) Strand = Plus / Plus Query: 174 gacgcggccggccgagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgagga 233 |||||| ||||||||||||||| |||||||||||| | |||| || |||||||||| || Sbjct: 564 gacgcgcccggccgagtggcgggcggcgcagctcaaggggctcatccggatgatcgacga 623 Query: 234 gaaggaggacgacatcagcgacgcgctccacgccgacctcgccaagccgcgcatggaggc 293 |||||| | ||| ||||||| ||||||||||| |||||||||||||||| |||||| | Sbjct: 624 gaaggaagccgagatcagcgccgcgctccacgaggacctcgccaagccgcatatggagtc 683 Query: 294 ctacctccacgagatatcgctagcgaaaggggcctgtatgtttgccctgaaggggctcaa 353 || ||||||||||||||| || | || | | || | |||||| || ||||||||||| Sbjct: 684 cttcctccacgagatatcacttacaaagtcgtcgtgcaagtttgcgctcaaggggctcaa 743 Query: 354 gaattggatgaagcctgacaaggtaccttctgccataactacattcccatccactgctca 413 ||| ||||||||||| || ||||||||| | ||||||||||||||||| ||| | || || Sbjct: 744 gaactggatgaagcccgagaaggtacctgcggccataactacattcccgtcctccgccca 803 Query: 414 aatcgtgccggagcccatgggtgtcgttctcgtcatatcagcctggaactatcctttctt 473 |||||||||||||||| | || ||||| ||| |||| |||||||||||||| |||||| | Sbjct: 804 aatcgtgccggagcccctcggcgtcgtgctcatcatctcagcctggaactaccctttcat 863 Query: 474 gctatctatcgagcccgtcattggagcaattgctgctgggaatgctgttgtgctcaagcc 533 || |||||||| || |||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 864 actctctatcgacccagtcattggagcaatcgctgctggaaatgctgttgttctgaagcc 923 Query: 534 atc 536 ||| Sbjct: 924 atc 926
>dbj|AK104746.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-E07, full insert sequence Length = 1720 Score = 262 bits (132), Expect = 1e-66 Identities = 339/408 (83%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 106 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 165 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 166 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 225 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgagat 308 | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 226 ctccgacgcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgagat 285 Query: 309 atcgctagcgaaaggggcctgtatgtttgccctgaaggggctcaagaattggatgaagcc 368 ||| | || || | ||||| | |||||| |||||||| | |||||||||||||| || Sbjct: 286 atcattggcaaaggcagcctgcacatttgccttgaaggggttgaagaattggatgaaacc 345 Query: 369 tgacaaggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcc 428 ||| ||||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 346 tgagaaggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcc 405 Query: 429 catgggtgtcgttctcgtcatatcagcctggaactatcctttcttgctatctatcgagcc 488 | |||||||| || ||||| ||||| |||||||| ||||||||||| || ||||| || Sbjct: 406 tcttggtgtcgtcctagtcatctcagcatggaactaccctttcttgctctccatcgaccc 465 Query: 489 cgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 466 agtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 513
>dbj|AK104603.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H06, full insert sequence Length = 1720 Score = 262 bits (132), Expect = 1e-66 Identities = 339/408 (83%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 106 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 165 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 166 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 225 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgagat 308 | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 226 ctccgacgcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgagat 285 Query: 309 atcgctagcgaaaggggcctgtatgtttgccctgaaggggctcaagaattggatgaagcc 368 ||| | || || | ||||| | |||||| |||||||| | |||||||||||||| || Sbjct: 286 atcattggcaaaggcagcctgcacatttgccttgaaggggttgaagaattggatgaaacc 345 Query: 369 tgacaaggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcc 428 ||| ||||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 346 tgagaaggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcc 405 Query: 429 catgggtgtcgttctcgtcatatcagcctggaactatcctttcttgctatctatcgagcc 488 | |||||||| || ||||| ||||| |||||||| ||||||||||| || ||||| || Sbjct: 406 tcttggtgtcgtcctagtcatctcagcatggaactaccctttcttgctctccatcgaccc 465 Query: 489 cgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 466 agtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 513
>dbj|AK068297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146E24, full insert sequence Length = 1922 Score = 254 bits (128), Expect = 3e-64 Identities = 338/408 (82%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 107 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 166 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 167 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 226 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgagat 308 | |||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 227 ctccgactcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgagat 286 Query: 309 atcgctagcgaaaggggcctgtatgtttgccctgaaggggctcaagaattggatgaagcc 368 ||| | || || | ||||| | |||||| |||||||| | |||||||||||||| || Sbjct: 287 atcattggcaaaggcagcctgcacatttgccttgaaggggttgaagaattggatgaaacc 346 Query: 369 tgacaaggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcc 428 ||| ||||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| Sbjct: 347 tgagaaggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcc 406 Query: 429 catgggtgtcgttctcgtcatatcagcctggaactatcctttcttgctatctatcgagcc 488 | |||||||| || ||||| ||||| |||||||| ||||||||||| || ||||| || Sbjct: 407 tcttggtgtcgtcctagtcatctcagcttggaactaccctttcttgctctccatcgaccc 466 Query: 489 cgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 467 agtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 514
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 115 bits (58), Expect = 2e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 137384 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 137443 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 137444 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 137503 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgag 306 | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| Sbjct: 137504 ctccgacgcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgag 137561 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 481 atcgagcccgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 139766 atcgacccagtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 139821 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 374 aggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcccatgg 433 |||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| | | Sbjct: 138973 aggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcctcttg 139032 Query: 434 gtgtcgttctcgtcatatcagcctggaactatcctttct 472 ||||||| || ||||| ||||| |||||||| ||||||| Sbjct: 139033 gtgtcgtcctagtcatctcagcatggaactaccctttct 139071 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 334 tttgccctgaaggggctcaagaattggatgaagcctgacaaggta 378 |||||| |||||||| | |||||||||||||| ||||| |||||| Sbjct: 138824 tttgccttgaaggggttgaagaattggatgaaacctgagaaggta 138868
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 115 bits (58), Expect = 2e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 7237 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 7296 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 7297 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 7356 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgag 306 | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| Sbjct: 7357 ctccgacgcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgag 7414 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 481 atcgagcccgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 9619 atcgacccagtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 9674 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 374 aggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcccatgg 433 |||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| | | Sbjct: 8826 aggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcctcttg 8885 Query: 434 gtgtcgttctcgtcatatcagcctggaactatcctttct 472 ||||||| || ||||| ||||| |||||||| ||||||| Sbjct: 8886 gtgtcgtcctagtcatctcagcatggaactaccctttct 8924 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 334 tttgccctgaaggggctcaagaattggatgaagcctgacaaggta 378 |||||| |||||||| | |||||||||||||| ||||| |||||| Sbjct: 8677 tttgccttgaaggggttgaagaattggatgaaacctgagaaggta 8721
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 115 bits (58), Expect = 2e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 4355874 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 4355933 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 4355934 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 4355993 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgag 306 | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| Sbjct: 4355994 ctccgacgcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgag 4356051 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 481 atcgagcccgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 4358256 atcgacccagtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 4358311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 374 aggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcccatgg 433 |||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| | | Sbjct: 4357463 aggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcctcttg 4357522 Query: 434 gtgtcgttctcgtcatatcagcctggaactatcctttct 472 ||||||| || ||||| ||||| |||||||| ||||||| Sbjct: 4357523 gtgtcgtcctagtcatctcagcatggaactaccctttct 4357561 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 334 tttgccctgaaggggctcaagaattggatgaagcctgacaaggta 378 |||||| |||||||| | |||||||||||||| ||||| |||||| Sbjct: 4357314 tttgccttgaaggggttgaagaattggatgaaacctgagaaggta 4357358
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 115 bits (58), Expect = 2e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 129 ggcggcgttgatggcggagctgcggggcagcttcagggagggccggacgcggccggccga 188 ||||||| || ||| ||||||| |||| ||||||||| || ||||| || |||| || Sbjct: 4364568 ggcggcggtggtgggggagctgagggggagcttcaggtccgggaggacgagggcggcgga 4364627 Query: 189 gtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgacat 248 ||||||| |||||||||| || | |||| |||||| | ||||||| ||||| ||||| Sbjct: 4364628 gtggcgggcggcgcagctgcgggggatcgtgaggatggtggaggagagggagggggacat 4364687 Query: 249 cagcgacgcgctccacgccgacctcgccaagccgcgcatggaggcctacctccacgag 306 | ||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| Sbjct: 4364688 ctccgacgcgctccactccgacctcgccaagcctcgcatggagtcctacctccacgag 4364745 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 481 atcgagcccgtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 ||||| || ||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 4366950 atcgacccagtcataggagcaattgctgctgggaatgccgttgtgctgaagccatc 4367005 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 374 aggtaccttctgccataactacattcccatccactgctcaaatcgtgccggagcccatgg 433 |||||||| | ||| | |||||||||||||| ||||| ||||| ||| | ||||| | | Sbjct: 4366157 aggtacctgccgccctcactacattcccatcaactgcacaaattgtgtcagagcctcttg 4366216 Query: 434 gtgtcgttctcgtcatatcagcctggaactatcctttct 472 ||||||| || ||||| ||||| |||||||| ||||||| Sbjct: 4366217 gtgtcgtcctagtcatctcagcatggaactaccctttct 4366255 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 334 tttgccctgaaggggctcaagaattggatgaagcctgacaaggta 378 |||||| |||||||| | |||||||||||||| ||||| |||||| Sbjct: 4366008 tttgccttgaaggggttgaagaattggatgaaacctgagaaggta 4366052
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 109 bits (55), Expect = 9e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 172 cggacgcggccggccgagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgag 231 ||||||||| || |||||||||| ||| |||||||||| ||| || |||||||||| Sbjct: 11976 cggacgcggtcgcccgagtggcgcgcggagcagctcaggggactcatccggatgatcgac 12035 Query: 232 gagaaggaggacgacatcagcgacgcgctccacgccgacctcgccaagccgcgcatggag 291 |||||||||| ||| ||||||| ||||||||| | |||||||||||||||| ||||||| Sbjct: 12036 gagaaggaggccgagatcagcgccgcgctccatgaagacctcgccaagccgcacatggag 12095 Query: 292 gcctacctccacgag 306 |||| ||||||||| Sbjct: 12096 tcctatctccacgag 12110 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 386 ccataactacattcccatccactgctcaaatcgtgccggagcccatgggtgtcgttctcg 445 |||||||||||||||| ||| | ||||||||||||||||||||| | |||||||| ||| Sbjct: 13201 ccataactacattcccgtcctccgctcaaatcgtgccggagcccctcggtgtcgtgctca 13260 Query: 446 tcatatcagcctggaactatcctttc 471 |||| ||||| |||||||| |||||| Sbjct: 13261 tcatctcagcttggaactaccctttc 13286 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 490 gtcattggagcaattgctgctgggaatgctgttgtgctcaagccatc 536 |||||||||||||| || ||||| ||||| ||||| || |||||||| Sbjct: 13864 gtcattggagcaatcgccgctggaaatgccgttgttctgaagccatc 13910 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 346 gggctcaagaattggatgaagcctgacaaggta 378 ||||||||||| ||||||||||| || |||||| Sbjct: 13044 gggctcaagaactggatgaagcccgaaaaggta 13076
>ref|XM_467037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1847 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 187 gagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgac 246 |||||| ||| |||||||||| || ||| ||||||||||| |||| ||||||||| | Sbjct: 245 gagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgcc 304 Query: 247 atcagcgacgcgctccacgccgacctcgccaagc 280 ||| |||||||||||||| |||||||| ||||| Sbjct: 305 atcttcgacgcgctccacgacgacctcggcaagc 338
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 187 gagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgac 246 |||||| ||| |||||||||| || ||| ||||||||||| |||| ||||||||| | Sbjct: 26059672 gagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgcc 26059613 Query: 247 atcagcgacgcgctccacgccgacctcgccaagc 280 ||| |||||||||||||| |||||||| ||||| Sbjct: 26059612 atcttcgacgcgctccacgacgacctcggcaagc 26059579 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 atggagccgacggcggcggcg 135 ||||||||||||||||||||| Sbjct: 121474 atggagccgacggcggcggcg 121454
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 187 gagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgac 246 |||||| ||| |||||||||| || ||| ||||||||||| |||| ||||||||| | Sbjct: 67118 gagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgcc 67059 Query: 247 atcagcgacgcgctccacgccgacctcgccaagc 280 ||| |||||||||||||| |||||||| ||||| Sbjct: 67058 atcttcgacgcgctccacgacgacctcggcaagc 67025
>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030D07 Length = 133321 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 187 gagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgac 246 |||||| ||| |||||||||| || ||| ||||||||||| |||| ||||||||| | Sbjct: 123545 gagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgcc 123486 Query: 247 atcagcgacgcgctccacgccgacctcgccaagc 280 ||| |||||||||||||| |||||||| ||||| Sbjct: 123485 atcttcgacgcgctccacgacgacctcggcaagc 123452
>dbj|AK070741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063H05, full insert sequence Length = 1847 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 187 gagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgac 246 |||||| ||| |||||||||| || ||| ||||||||||| |||| ||||||||| | Sbjct: 245 gagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgcc 304 Query: 247 atcagcgacgcgctccacgccgacctcgccaagc 280 ||| |||||||||||||| |||||||| ||||| Sbjct: 305 atcttcgacgcgctccacgacgacctcggcaagc 338
>gb|AF148877.1|AF148877 Oryza sativa subsp. indica putative aldehyde dehydrogenase OS-ALDH mRNA, complete cds Length = 1757 Score = 67.9 bits (34), Expect = 3e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 187 gagtggcggacggcgcagctcaggtcgctcgtcaggatgatcgaggagaaggaggacgac 246 |||||| ||| |||||||||| || ||| ||||||||||| |||| ||||||||| | Sbjct: 127 gagtggaggaaggcgcagctcgggggcctcatcaggatgatcacggaggaggaggacgcc 186 Query: 247 atcagcgacgcgctccacgccgacctcgccaagc 280 ||| |||||||||||||| |||||||| ||||| Sbjct: 187 atcttcgacgcgctccacgacgacctcggcaagc 220
>ref|NM_202950.1| Arabidopsis thaliana ALDH3I1; aldehyde dehydrogenase AT4G34240 (ALDH3I1) transcript variant AT4G34240.2 mRNA, complete cds Length = 1293 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 570 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 629 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 630 ggtaatgcggttgtgct 646
>ref|NM_119588.3| Arabidopsis thaliana ALDH3I1; aldehyde dehydrogenase AT4G34240 (ALDH3I1) transcript variant AT4G34240.1 mRNA, complete cds Length = 1951 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 654 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 713 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 714 ggtaatgcggttgtgct 730
>emb|AJ306961.1|ATH306961 Arabidopsis thaliana mRNA for aldehyde dehydrogenase (ALDH3 gene) Length = 1908 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 583 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 642 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 643 ggtaatgcggttgtgct 659
>gb|AY081532.1| Arabidopsis thaliana putative aldehyde dehydrogenase (At4g34240) mRNA, complete cds Length = 1683 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 547 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 606 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 607 ggtaatgcggttgtgct 623
>gb|AY054633.1| Arabidopsis thaliana putative aldehyde dehydrogenase (At4g34240; F10M10.10) mRNA, complete cds Length = 1763 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 571 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 630 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 631 ggtaatgcggttgtgct 647
>emb|BX827994.1|CNS0A2XR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH42ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1871 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 654 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 713 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 714 ggtaatgcggttgtgct 730
>emb|BX828872.1|CNS0A2OP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZF06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1030 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 451 tcagcctggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgct 510 ||||||||||| | |||||||| | ||| ||||||| ||||||||||| ||||| ||| Sbjct: 304 tcagcctggaatttccctttcttattgtctgtcgagccagtcattggagctattgcagct 363 Query: 511 gggaatgctgttgtgct 527 || ||||| |||||||| Sbjct: 364 ggtaatgcggttgtgct 380
>ref|NM_179439.1| Arabidopsis thaliana ALDH3H1; aldehyde dehydrogenase AT1G44170 (ALDH3H1) transcript variant AT1G44170.2 mRNA, complete cds Length = 1776 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 457 tggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgctgggaat 516 |||||||||||||| || | ||||| || || || ||||| |||||| ||||||||||| Sbjct: 540 tggaactatccttttctgttgtctattgatcctgttattggtgcaatttctgctgggaat 599 Query: 517 gctgttgt 524 |||||||| Sbjct: 600 gctgttgt 607
>ref|NM_103541.2| Arabidopsis thaliana ALDH3H1; aldehyde dehydrogenase AT1G44170 (ALDH3H1) transcript variant AT1G44170.1 mRNA, complete cds Length = 2124 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 457 tggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgctgggaat 516 |||||||||||||| || | ||||| || || || ||||| |||||| ||||||||||| Sbjct: 428 tggaactatccttttctgttgtctattgatcctgttattggtgcaatttctgctgggaat 487 Query: 517 gctgttgt 524 |||||||| Sbjct: 488 gctgttgt 495
>emb|AJ585241.1| Arabidopsis thaliana partial mRNA for putative aldehyde dehydrogenase (aldh3H1 gene) Length = 1524 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 457 tggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgctgggaat 516 |||||||||||||| || | ||||| || || || ||||| |||||| ||||||||||| Sbjct: 354 tggaactatccttttctgttgtctattgatcctgttattggtgcaatttctgctgggaat 413 Query: 517 gctgttgt 524 |||||||| Sbjct: 414 gctgttgt 421
>gb|AY072122.1| Arabidopsis thaliana putative aldehyde dehydrogenase (At1g44170) mRNA, complete cds Length = 1794 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 457 tggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgctgggaat 516 |||||||||||||| || | ||||| || || || ||||| |||||| ||||||||||| Sbjct: 542 tggaactatccttttctgttgtctattgatcctgttattggtgcaatttctgctgggaat 601 Query: 517 gctgttgt 524 |||||||| Sbjct: 602 gctgttgt 609
>emb|BX815803.1|CNS0ACTA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 457 tggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgctgggaat 516 |||||||||||||| || | ||||| || || || ||||| |||||| ||||||||||| Sbjct: 421 tggaactatccttttctgttgtctattgatcctgttattggtgcaatttctgctgggaat 480 Query: 517 gctgttgt 524 |||||||| Sbjct: 481 gctgttgt 488
>gb|AY084648.1| Arabidopsis thaliana clone 1141 mRNA, complete sequence Length = 1682 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 457 tggaactatcctttcttgctatctatcgagcccgtcattggagcaattgctgctgggaat 516 |||||||||||||| || | ||||| || || || ||||| |||||| ||||||||||| Sbjct: 428 tggaactatccttttctgttgtctattgatcctgttattggtgcaatttctgctgggaat 487 Query: 517 gctgttgt 524 |||||||| Sbjct: 488 gctgttgt 495
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 482 tcgagcccgtcattggagcaattgctgctgggaatgctgttgtgct 527 ||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 36826 tcgagccagtcattggagctattgcagctggtaatgcggttgtgct 36871
>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project) Length = 114367 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 482 tcgagcccgtcattggagcaattgctgctgggaatgctgttgtgct 527 ||||||| ||||||||||| ||||| ||||| ||||| |||||||| Sbjct: 28307 tcgagccagtcattggagctattgcagctggtaatgcggttgtgct 28352
>gb|AC074228.9|AC074228 Arabidopsis thaliana chromosome 1 BAC T7O23 genomic sequence, complete sequence Length = 72832 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 493 attggagcaattgctgctgggaatgctgttgt 524 ||||| |||||| ||||||||||||||||||| Sbjct: 18950 attggtgcaatttctgctgggaatgctgttgt 18981
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 259 ctccacgccgacctcgccaagcc 281 ||||||||||||||||||||||| Sbjct: 3946335 ctccacgccgacctcgccaagcc 3946357 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 436 gtcgttctcgtcatatcagcctggaactatcctttct 472 ||||| |||||||| || ||||||||||| ||||||| Sbjct: 3948793 gtcgtgctcgtcatctcggcctggaactaccctttct 3948829
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 259 ctccacgccgacctcgccaagcc 281 ||||||||||||||||||||||| Sbjct: 3946309 ctccacgccgacctcgccaagcc 3946331 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 436 gtcgttctcgtcatatcagcctggaactatcctttct 472 ||||| |||||||| || ||||||||||| ||||||| Sbjct: 3948767 gtcgtgctcgtcatctcggcctggaactaccctttct 3948803
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 259 ctccacgccgacctcgccaagcc 281 ||||||||||||||||||||||| Sbjct: 108311 ctccacgccgacctcgccaagcc 108333 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 436 gtcgttctcgtcatatcagcctggaactatcctttct 472 ||||| |||||||| || ||||||||||| ||||||| Sbjct: 110769 gtcgtgctcgtcatctcggcctggaactaccctttct 110805
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 atcgtgccggagcccatgggtg 436 |||||||||||||||||||||| Sbjct: 1319488 atcgtgccggagcccatgggtg 1319509
>gb|AC011488.7| Homo sapiens chromosome 19 clone CTB-171N13, complete sequence Length = 134308 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 cttctctcctacccccaccatc 23 |||||||||||||||||||||| Sbjct: 17506 cttctctcctacccccaccatc 17527
>gb|AC093078.3| Homo sapiens chromosome 19 clone LLNLR-305B7, complete sequence Length = 41898 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 cttctctcctacccccaccatc 23 |||||||||||||||||||||| Sbjct: 33660 cttctctcctacccccaccatc 33681
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 tggagccgacggcggcggcgt 136 ||||||||||||||||||||| Sbjct: 123342 tggagccgacggcggcggcgt 123362
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 atggagccgacggcggcggcg 135 ||||||||||||||||||||| Sbjct: 1604 atggagccgacggcggcggcg 1584
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 tggagccgacggcggcggcgt 136 ||||||||||||||||||||| Sbjct: 140051 tggagccgacggcggcggcgt 140031
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 tggagccgacggcggcggcgt 136 ||||||||||||||||||||| Sbjct: 22544804 tggagccgacggcggcggcgt 22544784 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cggcggcggcgttgatggcg 144 |||||||||||||||||||| Sbjct: 14266591 cggcggcggcgttgatggcg 14266572
>gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, complete sequence Length = 160896 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 caggatgatcgaggagaagga 239 ||||||||||||||||||||| Sbjct: 53745 caggatgatcgaggagaagga 53765
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 tggagccgacggcggcggcgt 136 ||||||||||||||||||||| Sbjct: 22537833 tggagccgacggcggcggcgt 22537813 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cggcggcggcgttgatggcg 144 |||||||||||||||||||| Sbjct: 14261566 cggcggcggcgttgatggcg 14261547
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 acggcggcggcgttgatggcg 144 ||||||||||||||||||||| Sbjct: 3728197 acggcggcggcgttgatggcg 3728217
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 atggagccgacggcggcggcg 135 ||||||||||||||||||||| Sbjct: 116083 atggagccgacggcggcggcg 116063
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 atggagccgacggcggcggcg 135 ||||||||||||||||||||| Sbjct: 70501 atggagccgacggcggcggcg 70481
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 atggagccgacggcggcggcg 135 ||||||||||||||||||||| Sbjct: 1625 atggagccgacggcggcggcg 1605
>ref|XM_450812.1| Oryza sativa (japonica cultivar-group), mRNA Length = 207 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 69 ggagtcgacggcggcggcgttggtggcg 96
>ref|NM_190174.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 990 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgacggcggcggcgttgatggcgg 145 |||||||||||||||||| ||||| Sbjct: 763 cgacggcggcggcgttgaaggcgg 740
>ref|NM_186404.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2346 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 711 ggagtcgacggcggcggcgttggtggcg 684
>gb|BT018206.1| Zea mays clone EL01N0560B10.c mRNA sequence Length = 1356 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 cgacgcgctccacgccgacctcgc 275 ||||||||||| |||||||||||| Sbjct: 262 cgacgcgctcctcgccgacctcgc 285
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 gaatgctgttgtgctcaagc 532 |||||||||||||||||||| Sbjct: 199267 gaatgctgttgtgctcaagc 199248
>gb|AC159437.1| Trypanosoma brucei chromosome 7 clone RPCI93-29K4, complete sequence Length = 159858 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gaatgctgttgtgctcaagc 532 |||||||||||||||||||| Sbjct: 74678 gaatgctgttgtgctcaagc 74697
>ref|XM_360460.1| Magnaporthe grisea 70-15 predicted protein (MG10772.4) partial mRNA Length = 909 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 ggcggcggcgttgatggcgg 145 |||||||||||||||||||| Sbjct: 576 ggcggcggcgttgatggcgg 557
>ref|XM_751271.1| Ustilago maydis 521 hypothetical protein (UM00217.1) partial mRNA Length = 2517 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cgaggagaaggaggacgaca 247 |||||||||||||||||||| Sbjct: 2055 cgaggagaaggaggacgaca 2074
>ref|XM_819401.1| Trypanosoma brucei TREU927 clone RPCI93-29K4 telomerase-associated protein (Tb927.7.830) partial mRNA Length = 8421 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 gaatgctgttgtgctcaagc 532 |||||||||||||||||||| Sbjct: 514 gaatgctgttgtgctcaagc 533
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gttgatggcggagctgcggg 154 |||||||||||||||||||| Sbjct: 692820 gttgatggcggagctgcggg 692839
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 32188 ggagtcgacggcggcggcgttggtggcg 32161
>gb|DQ082901.1| Icelinus oculatus cytochrome b (cytb) gene, partial cds; mitochondrial Length = 516 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cgaggagaaggaggacgaca 247 |||||||||||||||||||| Sbjct: 404 cgaggagaaggaggacgaca 423
>emb|BX511168.4| Zebrafish DNA sequence from clone DKEY-22F5 in linkage group 21, complete sequence Length = 263757 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 gtttgccctgaaggggctcaagaa 356 |||||||||||||| ||||||||| Sbjct: 80016 gtttgccctgaaggtgctcaagaa 79993
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ggcggcggcgttgatggcgg 145 |||||||||||||||||||| Sbjct: 3762497 ggcggcggcgttgatggcgg 3762516
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cggcggcggcgttgatggcg 144 |||||||||||||||||||| Sbjct: 15820 cggcggcggcgttgatggcg 15801
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cggcggcggcgttgatggcg 144 |||||||||||||||||||| Sbjct: 77979 cggcggcggcgttgatggcg 77960
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 21510099 ggagtcgacggcggcggcgttggtggcg 21510072
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 12941721 ggagtcgacggcggcggcgttggtggcg 12941748
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 3312425 ggagtcgacggcggcggcgttggtggcg 3312452
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgacggcggcggcgttgatggcgg 145 |||||||||||||||||| ||||| Sbjct: 38267599 cgacggcggcggcgttgaaggcgg 38267576
>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete sequence Length = 249205 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cgcggccggccgagtggcgg 195 |||||||||||||||||||| Sbjct: 106920 cgcggccggccgagtggcgg 106901
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgacggcggcggcgttgatggcgg 145 |||||||||||||||||| ||||| Sbjct: 186833 cgacggcggcggcgttgaaggcgg 186810
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgacggcggcggcgttgatggcgg 145 |||||||||||||||||| ||||| Sbjct: 28424 cgacggcggcggcgttgaaggcgg 28401
>gb|AC068602.2|AC068602 Genomic sequence for Arabidopsis thaliana BAC F14D16 from chromosome I, complete sequence Length = 87508 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 agctcaggtcgctcgtcagg 222 |||||||||||||||||||| Sbjct: 41971 agctcaggtcgctcgtcagg 41990
>emb|AL935025.11| Zebrafish DNA sequence from clone CH211-160K2 in linkage group 16, complete sequence Length = 147313 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cagcctgggcttgagccagc 89 |||||||||||||||||||| Sbjct: 121334 cagcctgggcttgagccagc 121315
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 103705 ggagtcgacggcggcggcgttggtggcg 103732
>dbj|AK109594.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C09, full insert sequence Length = 1504 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 cgacggcggcggcgttgatggcgg 145 |||||||||||||||||| ||||| Sbjct: 1044 cgacggcggcggcgttgaaggcgg 1021
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 ggagccgacggcggcggcgttgatggcg 144 |||| ||||||||||||||||| ||||| Sbjct: 122118 ggagtcgacggcggcggcgttggtggcg 122145
>gb|AC138719.4| Mus musculus BAC clone RP23-178O8 from 10, complete sequence Length = 183689 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 gaaggggctcaagaattggatgaa 365 ||||||||| |||||||||||||| Sbjct: 157868 gaaggggctgaagaattggatgaa 157845
>gb|AC140410.3| Mus musculus BAC clone RP23-141J11 from 10, complete sequence Length = 205197 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 gaaggggctcaagaattggatgaa 365 ||||||||| |||||||||||||| Sbjct: 15698 gaaggggctgaagaattggatgaa 15675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,339,012 Number of Sequences: 3902068 Number of extensions: 4339012 Number of successful extensions: 140008 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138145 Number of HSP's gapped (non-prelim): 1863 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
