ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63i17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009272.1| Triticum aestivum clone wlk8.pk0011.e10:fis, full insert mRNA sequence Length = 1878 Score = 1029 bits (519), Expect = 0.0 Identities = 558/571 (97%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctccgcccgcggtcagcccctctcccgactca 108 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 70 tggccatggcgacggcgctccgcaagctctccgcccgcggccagcccctctcccgcctca 129 Query: 109 cgccgctctactccatggcgtccctgccggcgacggaggagagatccgcagtcacctggc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 cgccgctctactccatggcgtccctgccggcgacggaggagagatccgcagtcacctggc 189 Query: 169 cgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatcgagc 228 |||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 190 cgaagcagttgaacgcgccgctggaggaggtcgaccccgagattgccgacatcatcgagc 249 Query: 229 tcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaacttcacctccc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 tcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaacttcacctccc 309 Query: 289 tgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccg 348 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 310 tgtcggtgatgcaggcggtgggatccgtcatgaccaacaagtacagcgaggggtaccccg 369 Query: 349 gcgccagatactacggtggaaacgaatacattgatatggccgagacgctgtgccagaaac 408 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 370 gcgcgagatactacggtggaaacgaatacattgatatggccgagacgctgtgtcagaaac 429 Query: 409 gtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtgcaacctctgt 468 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 430 gtgctttggaggccttcaatttggacccagagaagtggggagtgaatgtgcaacctctat 489 Query: 469 cgggttcacctgccaacttccatgtatacactgctctgctgaagccacatgacagaatta 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 cgggttcacctgccaacttccatgtatacactgctctgctgaagccacatgacagaatta 549 Query: 529 tggccctggatcttcctcacggtggacatctttcccatggttaccagactgacacaaaga 588 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 550 tggctctggatcttcctcacggtggacatctttcccatggctaccagactgacacaaaga 609 Query: 589 aaatctcagcagtttcaatattctttgagac 619 ||||||||||||||||||||||||||||||| Sbjct: 610 aaatctcagcagtttcaatattctttgagac 640
>ref|XM_469653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2052 Score = 662 bits (334), Expect = 0.0 Identities = 481/530 (90%) Strand = Plus / Plus Query: 90 cagcccctctcccgactcacgccgctctactccatggcgtccctgccggcgacggaggag 149 ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 184 cagccgctctcccgcatcaccccgctctactacatggcgtccctgccggcgacggaggag 243 Query: 150 agatccgcagtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggag 209 ||||||| ||||||||||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 244 agatccggagtcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgag 303 Query: 210 attgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccg 269 || |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 304 atcgccgacatcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccg 363 Query: 270 tcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaag 329 ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 364 tcggagaacttcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaag 423 Query: 330 tacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatggcc 389 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 424 tacagcgaggggtaccccggcgcgagatactacggtggaaacgaatacattgatatggcc 483 Query: 390 gagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgggga 449 ||| | ||||||||||||||||||||||||||||| |||||||| | ||| |||||| Sbjct: 484 gagtcattgtgccagaaacgtgctttggaggccttccgcttggacccagcgaaatgggga 543 Query: 450 gtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgctg 509 ||||||||||||||||| || || |||||||||||||||||||| |||||||| || || Sbjct: 544 gtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctattg 603 Query: 510 aagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatggt 569 || |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 604 aaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacggc 663 Query: 570 taccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 664 taccagactgatactaagaagatttcagcagtttcgatattctttgagac 713 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 134 tggccatggcgacggcgctccgcaagctctcc 165
>dbj|AK119226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H12, full insert sequence Length = 1923 Score = 662 bits (334), Expect = 0.0 Identities = 481/530 (90%) Strand = Plus / Plus Query: 90 cagcccctctcccgactcacgccgctctactccatggcgtccctgccggcgacggaggag 149 ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 107 cagccgctctcccgcatcaccccgctctactacatggcgtccctgccggcgacggaggag 166 Query: 150 agatccgcagtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggag 209 ||||||| ||||||||||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 167 agatccggagtcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgag 226 Query: 210 attgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccg 269 || |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 227 atcgccgacatcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccg 286 Query: 270 tcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaag 329 ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 287 tcggagaacttcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaag 346 Query: 330 tacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatggcc 389 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 347 tacagcgaggggtaccccggcgcgagatactacggtggaaacgaatacattgatatggcc 406 Query: 390 gagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgggga 449 ||| | ||||||||||||||||||||||||||||| |||||||| | ||| |||||| Sbjct: 407 gagtcattgtgccagaaacgtgctttggaggccttccgcttggacccagcgaaatgggga 466 Query: 450 gtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgctg 509 ||||||||||||||||| || || |||||||||||||||||||| |||||||| || || Sbjct: 467 gtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctattg 526 Query: 510 aagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatggt 569 || |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 527 aaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacggc 586 Query: 570 taccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 587 taccagactgatactaagaagatttcagcagtttcgatattctttgagac 636 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 57 tggccatggcgacggcgctccgcaagctctcc 88
>dbj|AK100404.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086P20, full insert sequence Length = 1976 Score = 662 bits (334), Expect = 0.0 Identities = 481/530 (90%) Strand = Plus / Plus Query: 90 cagcccctctcccgactcacgccgctctactccatggcgtccctgccggcgacggaggag 149 ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 108 cagccgctctcccgcatcaccccgctctactacatggcgtccctgccggcgacggaggag 167 Query: 150 agatccgcagtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggag 209 ||||||| ||||||||||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 168 agatccggagtcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgag 227 Query: 210 attgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccg 269 || |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 228 atcgccgacatcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccg 287 Query: 270 tcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaag 329 ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 288 tcggagaacttcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaag 347 Query: 330 tacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatggcc 389 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 348 tacagcgaggggtaccccggcgcgagatactacggtggaaacgaatacattgatatggcc 407 Query: 390 gagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgggga 449 ||| | ||||||||||||||||||||||||||||| |||||||| | ||| |||||| Sbjct: 408 gagtcattgtgccagaaacgtgctttggaggccttccgcttggacccagcgaaatgggga 467 Query: 450 gtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgctg 509 ||||||||||||||||| || || |||||||||||||||||||| |||||||| || || Sbjct: 468 gtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctattg 527 Query: 510 aagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatggt 569 || |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 528 aaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacggc 587 Query: 570 taccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 588 taccagactgatactaagaagatttcagcagtttcgatattctttgagac 637 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 58 tggccatggcgacggcgctccgcaagctctcc 89
>dbj|AK060674.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A01, full insert sequence Length = 1844 Score = 662 bits (334), Expect = 0.0 Identities = 481/530 (90%) Strand = Plus / Plus Query: 90 cagcccctctcccgactcacgccgctctactccatggcgtccctgccggcgacggaggag 149 ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 100 cagccgctctcccgcatcaccccgctctactacatggcgtccctgccggcgacggaggag 159 Query: 150 agatccgcagtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggag 209 ||||||| ||||||||||||||||||||| |||||||||||||||||||| || || ||| Sbjct: 160 agatccggagtcacctggccgaagcagctgaacgcgccgctggaggaggtggatcccgag 219 Query: 210 attgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccg 269 || |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 220 atcgccgacatcatcgagcacgagaaggcccgccaatggaagggtctggagctcatcccg 279 Query: 270 tcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaag 329 ||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||| Sbjct: 280 tcggagaacttcacctcggtgtcagtgatgcaggcggtgggatccgtcatgaccaacaag 339 Query: 330 tacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatggcc 389 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 340 tacagcgaggggtaccccggcgcgagatactacggtggaaacgaatacattgatatggcc 399 Query: 390 gagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgggga 449 ||| | ||||||||||||||||||||||||||||| |||||||| | ||| |||||| Sbjct: 400 gagtcattgtgccagaaacgtgctttggaggccttccgcttggacccagcgaaatgggga 459 Query: 450 gtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgctg 509 ||||||||||||||||| || || |||||||||||||||||||| |||||||| || || Sbjct: 460 gtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctattg 519 Query: 510 aagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatggt 569 || |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 520 aaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacggc 579 Query: 570 taccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 580 taccagactgatactaagaagatttcagcagtttcgatattctttgagac 629 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 50 tggccatggcgacggcgctccgcaagctctcc 81
>gb|AF439728.1|AF439728 Zea mays serine hydroxymethyltransferase mRNA, partial cds Length = 1028 Score = 297 bits (150), Expect = 2e-77 Identities = 264/302 (87%) Strand = Plus / Plus Query: 318 atgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatac 377 ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| || | Sbjct: 16 atgaccaacaagtacagcgaggggtaccctggcgcaagatactacgggggaaatgagttt 75 Query: 378 attgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccg 437 ||||||||||| ||| | |||| |||||||||||||||||||| ||| |||||||||| Sbjct: 76 attgatatggcagagtccttgtgtcagaaacgtgctttggaggctttccgtttggacccg 135 Query: 438 gagaagtggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatac 497 | ||| ||||||||||||||||||||||| || ||||| || |||||||||||||||||| Sbjct: 136 gcgaaatggggagtgaatgtgcaacctctatccggttcgcccgccaacttccatgtatac 195 Query: 498 actgctctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacat 557 ||||| || ||||||||||||| || || ||||| ||||||||||||||||||||||| Sbjct: 196 actgcactcttgaagccacatgaaaggatcatggctttggatcttcctcacggtggacat 255 Query: 558 ctttcccatggttaccagactgacacaaagaaaatctcagcagtttcaatattctttgag 617 ||||| |||||||||||||||||||| ||||| || || ||| ||||||||| |||||| Sbjct: 256 ctttctcatggttaccagactgacactaagaagatatctgcaacttcaatattttttgag 315 Query: 618 ac 619 || Sbjct: 316 ac 317
>gb|AY105738.1| Zea mays PCO070960 mRNA sequence Length = 1476 Score = 250 bits (126), Expect = 5e-63 Identities = 231/266 (86%) Strand = Plus / Plus Query: 354 agatactacggtggaaacgaatacattgatatggccgagacgctgtgccagaaacgtgct 413 ||||||||||| ||||| || | ||||||||||| ||| | |||| |||||||||||| Sbjct: 5 agatactacgggggaaatgagtttattgatatggcagagtccttgtgtcagaaacgtgct 64 Query: 414 ttggaggccttcaatttggacccggagaagtggggagtgaatgtgcaacctctgtcgggt 473 |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||| || ||| Sbjct: 65 ttggaggctttccgtttggacccggcgaaatggggagtgaatgtgcaacctctatccggt 124 Query: 474 tcacctgccaacttccatgtatacactgctctgctgaagccacatgacagaattatggcc 533 || || ||||||||||||||||||||||| || ||||||||||||| || || ||||| Sbjct: 125 tcgcccgccaacttccatgtatacactgcactcttgaagccacatgaaaggatcatggct 184 Query: 534 ctggatcttcctcacggtggacatctttcccatggttaccagactgacacaaagaaaatc 593 |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 185 ttggatcttcctcacggtggacatctttctcatggttaccagactgacactaagaagata 244 Query: 594 tcagcagtttcaatattctttgagac 619 || ||| ||||||||| |||||||| Sbjct: 245 tctgcaacttcaatattttttgagac 270
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Plus Query: 250 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgg 309 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 30007894 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 30007953 Query: 310 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 369 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 30007954 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 30008013 Query: 370 acga 373 |||| Sbjct: 30008014 acga 30008017 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 165 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 224 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 30007717 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 30007776 Query: 225 gagctcgagaaggcccgccaatggaagg 252 |||| ||||||||||||||||||||||| Sbjct: 30007777 gagcacgagaaggcccgccaatggaagg 30007804 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 30008711 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 30008770 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||| |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 30008771 gaaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacgg 30008830 Query: 569 ttaccag 575 |||||| Sbjct: 30008831 ctaccag 30008837 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 374 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 433 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 30008158 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 30008217 Query: 434 cccggagaagtggggag 450 ||| | ||| ||||||| Sbjct: 30008218 cccagcgaaatggggag 30008234 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 30007561 ggcgtccctgccggcgacggaggagagatccggagtcacc 30007600 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 30007359 tggccatggcgacggcgctccgcaagctctcc 30007390 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 573 cagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 |||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 30009072 cagactgatactaagaagatttcagcagtttcgatattctttgagac 30009118
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 250 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgg 309 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 2712 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 2653 Query: 310 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 369 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2652 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 2593 Query: 370 acga 373 |||| Sbjct: 2592 acga 2589 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 165 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 224 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 2889 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 2830 Query: 225 gagctcgagaaggcccgccaatggaagg 252 |||| ||||||||||||||||||||||| Sbjct: 2829 gagcacgagaaggcccgccaatggaagg 2802 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 1895 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 1836 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||| |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 1835 gaaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacgg 1776 Query: 569 ttaccag 575 |||||| Sbjct: 1775 ctaccag 1769 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 374 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 433 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 2448 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 2389 Query: 434 cccggagaagtggggag 450 ||| | ||| ||||||| Sbjct: 2388 cccagcgaaatggggag 2372 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 3045 ggcgtccctgccggcgacggaggagagatccggagtcacc 3006 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 3247 tggccatggcgacggcgctccgcaagctctcc 3216 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 573 cagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 |||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 1534 cagactgatactaagaagatttcagcagtttcgatattctttgagac 1488
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 250 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgg 309 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 99857 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 99798 Query: 310 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 369 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99797 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 99738 Query: 370 acga 373 |||| Sbjct: 99737 acga 99734 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 165 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 224 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 100034 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 99975 Query: 225 gagctcgagaaggcccgccaatggaagg 252 |||| ||||||||||||||||||||||| Sbjct: 99974 gagcacgagaaggcccgccaatggaagg 99947 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Minus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 99040 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 98981 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||| |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 98980 gaaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacgg 98921 Query: 569 ttaccag 575 |||||| Sbjct: 98920 ctaccag 98914 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 374 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 433 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 99593 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 99534 Query: 434 cccggagaagtggggag 450 ||| | ||| ||||||| Sbjct: 99533 cccagcgaaatggggag 99517 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 100190 ggcgtccctgccggcgacggaggagagatccggagtcacc 100151 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 100392 tggccatggcgacggcgctccgcaagctctcc 100361 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 573 cagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 |||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 98679 cagactgatactaagaagatttcagcagtttcgatattctttgagac 98633
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Plus Query: 250 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgg 309 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 30099316 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 30099375 Query: 310 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 369 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 30099376 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 30099435 Query: 370 acga 373 |||| Sbjct: 30099436 acga 30099439 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 165 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 224 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 30099139 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 30099198 Query: 225 gagctcgagaaggcccgccaatggaagg 252 |||| ||||||||||||||||||||||| Sbjct: 30099199 gagcacgagaaggcccgccaatggaagg 30099226 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||||||||||||||| || || |||||||||||||||||||| |||||||| || | Sbjct: 30100133 agtgaatgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctatt 30100192 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||| |||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || Sbjct: 30100193 gaaaccacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacgg 30100252 Query: 569 ttaccag 575 |||||| Sbjct: 30100253 ctaccag 30100259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 374 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 433 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 30099580 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 30099639 Query: 434 cccggagaagtggggag 450 ||| | ||| ||||||| Sbjct: 30099640 cccagcgaaatggggag 30099656 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 30098983 ggcgtccctgccggcgacggaggagagatccggagtcacc 30099022 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||||||| Sbjct: 30098781 tggccatggcgacggcgctccgcaagctctcc 30098812 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 573 cagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 |||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 30100494 cagactgatactaagaagatttcagcagtttcgatattctttgagac 30100540
>dbj|AK063056.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-F04, full insert sequence Length = 791 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Plus Query: 250 aggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgg 309 |||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 266 agggtctggagctcatcccgtcggagaacttcacctcggtgtcagtgatgcaggcggtgg 325 Query: 310 gatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaa 369 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 326 gatccgtcatgaccaacaagtacagcgaggggtaccccggcgcgagatactacggtggaa 385 Query: 370 acga 373 |||| Sbjct: 386 acga 389 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 165 tggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgacatcatc 224 |||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 89 tggccgaagcagctgaacgcgccgctggaggaggtggatcccgagatcgccgacatcatc 148 Query: 225 gagctcgagaaggcccgccaatggaagg 252 |||| ||||||||||||||||||||||| Sbjct: 149 gagcacgagaaggcccgccaatggaagg 176 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 374 atacattgatatggccgagacgctgtgccagaaacgtgctttggaggccttcaatttgga 433 ||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 530 atacattgatatggccgagtcattgtgccagaaacgtgctttggaggccttccgcttgga 589 Query: 434 cccggagaagtggggag 450 ||| | ||| ||||||| Sbjct: 590 cccagcgaaatggggag 606
>emb|Z25863.1|STGHMT S.tuberosum mRNA for glycine hydroxymethyltransferase Length = 1745 Score = 184 bits (93), Expect = 2e-43 Identities = 333/413 (80%) Strand = Plus / Plus Query: 207 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 266 |||||||| ||||| || |||| ||||| || ||||||||||||||||| || ||||| Sbjct: 189 gagattgctgacattattgagcatgagaaagcacgccaatggaaggggctcgaactcatt 248 Query: 267 ccgtcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaac 326 || || || || ||||| || | ||||||||||| || || ||||| |||||||| ||| Sbjct: 249 ccatcagaaaatttcacttctgtttcggtgatgcaagcagttggatcagtcatgactaac 308 Query: 327 aagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatg 386 |||||||| || || || || || ||||||||||| || ||||| || ||||| || ||| Sbjct: 309 aagtacagtgaaggatatcctggtgccagatactatgggggaaatgagtacatagacatg 368 Query: 387 gccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgg 446 || || || | |||||||||||||||||||| || |||| ||||| || | || ||| Sbjct: 369 gcagaaaccttatgccagaaacgtgctttggaagcattcaggttggatcctgcaaaatgg 428 Query: 447 ggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctg 506 |||||||||||||| ||||| || || ||||| || || || || || |||||||| | Sbjct: 429 ggagtgaatgtgcagcctctatcaggatcacccgctaattttcaagtttacactgcatta 488 Query: 507 ctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccat 566 | || || ||||| ||||| ||||| || ||||||||||| |||||||||||||| ||| Sbjct: 489 ttaaaacctcatgagagaatcatggctcttgatcttcctcatggtggacatctttctcat 548 Query: 567 ggttaccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 || || |||||||| |||||||| || || ||||| || |||||||||||||| Sbjct: 549 ggatatcagactgatacaaagaagatatctgcagtctctatattctttgagac 601
>ref|NM_119954.2| Arabidopsis thaliana SHM1 (SERINE HYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase AT4G37930 (SHM1) mRNA, complete cds Length = 1822 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 256 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 315 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 316 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 375 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 376 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 435 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 436 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 495 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 496 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 555 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 556 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 615 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 616 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 675 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 676 gacaccaagaagatatcagctgtgtctatcttctttga 713
>emb|Z25859.1|FPGHMT1 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1746 Score = 163 bits (82), Expect = 8e-37 Identities = 346/434 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| |||||||||||| | || || ||||| |||| || || || ||||| || || Sbjct: 169 gtcacttggccgaagcagttgaatgctccgcttgaggttgtggatcctgagatcgcggat 228 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || ||||| || ||||| || ||||||||||| || || ||||| || || |||||| Sbjct: 229 attattgagcttgaaaaggctcggcaatggaagggtcttgaactcataccatcagagaac 288 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 || ||||| || || |||||||| || || |||||||| ||||| ||||| ||||| || Sbjct: 289 tttacctctctatcagtgatgcaagcagttggatccgtgatgaccaacaaatacagtgaa 348 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 ||||| || || || |||||||| |||||||| || || ||||| ||||| || ||| || Sbjct: 349 gggtatccaggagctagatactatggtggaaatgagtatattgacatggcggaaacgttg 408 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 || || || ||||| ||||| ||||| ||||| || | || ||||||||||||||| Sbjct: 409 tgtcaaaagcgtgcattggaagcctttcggttggatcctgcaaaatggggagtgaatgtg 468 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 || ||||| || || ||||| || || |||||||| |||||||| | | ||| | ||| Sbjct: 469 cagcctctttcaggatcaccagctaatttccatgtctacactgcattattaaaggctcat 528 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 |||||||| ||||| || ||||||||||| ||||| ||||| || |||||||| ||||| Sbjct: 529 gacagaatcatggcacttgatcttcctcatggtgggcatctgtcacatggttatcagacc 588 Query: 579 gacacaaagaaaat 592 |||||||||||||| Sbjct: 589 gacacaaagaaaat 602
>emb|AJ271726.1|ATH271726 Arabidopsis thaliana mRNA for serine hydroxymethyl transferase (shm1 gene) Length = 1797 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 232 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 291 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 292 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 351 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 352 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 411 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 412 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 471 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 472 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 531 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 532 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 591 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 592 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 651 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 652 gacaccaagaagatatcagctgtgtctatcttctttga 689
>dbj|AK061913.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A08, full insert sequence Length = 1402 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 454 atgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagc 513 ||||||||||||| || || |||||||||||||||||||| |||||||| || |||| | Sbjct: 1 atgtgcaacctctatcagggtcacctgccaacttccatgtttacactgccctattgaaac 60 Query: 514 cacatgacagaattatggccctggatcttcctcacggtggacatctttcccatggttacc 573 ||||||| ||||| ||||| ||||||||||||| |||||||||||||| || || |||| Sbjct: 61 cacatgagagaatcatggctttggatcttcctcatggtggacatctttctcacggctacc 120 Query: 574 agactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 121 agactgatactaagaagatttcagcagtttcgatattctttgagac 166
>gb|AY070726.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1775 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 240 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 299 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 300 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 359 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 360 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 419 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 420 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 479 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 480 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 539 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 540 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 599 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 600 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 659 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 660 gacaccaagaagatatcagctgtgtctatcttctttga 697
>gb|AY057645.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1716 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 186 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 245 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 246 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 305 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 306 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 365 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 366 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 425 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 426 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 485 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 486 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 545 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 546 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 605 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 606 gacaccaagaagatatcagctgtgtctatcttctttga 643
>gb|AF428388.1|AF428388 Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1730 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 187 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 246 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 247 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 306 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 307 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 366 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 367 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 426 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 427 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 486 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 487 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 546 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 547 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 606 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 607 gacaccaagaagatatcagctgtgtctatcttctttga 644
>gb|BT006353.1| Arabidopsis thaliana At4g37930/F20D10_50 gene, complete cds Length = 1554 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 133 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 192 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 193 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 252 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 253 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 312 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 313 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 372 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 373 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 432 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 433 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 492 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 493 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 552 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 553 gacaccaagaagatatcagctgtgtctatcttctttga 590
>emb|BX828432.1|CNS0A3VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1771 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 229 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 288 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 289 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 348 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 349 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 408 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 409 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 468 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 469 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 528 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 529 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 588 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 589 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 648 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 649 gacaccaagaagatatcagctgtgtctatcttctttga 686
>gb|AY089107.1| Arabidopsis thaliana clone 33799 mRNA, complete sequence Length = 1725 Score = 163 bits (82), Expect = 8e-37 Identities = 364/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 194 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 253 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 254 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 313 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 314 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 373 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 374 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 433 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 434 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 493 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 494 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 553 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || ||||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 554 gaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatggttatcagact 613 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 614 gacaccaagaagatatcagctgtgtctatcttctttga 651
>gb|AY054254.1| Arabidopsis thaliana AT4g37930/F20D10_50 mRNA, complete cds Length = 1770 Score = 155 bits (78), Expect = 2e-34 Identities = 363/458 (79%) Strand = Plus / Plus Query: 159 gtcacctggccgaagcagctcaacgcgccgctggaggaggtcgacccggagattgccgac 218 ||||| ||||| || ||||| ||||| || | |||||||| || || |||||||| ||| Sbjct: 240 gtcacttggccaaaacagcttaacgcacctttagaggaggttgatcctgagattgctgac 299 Query: 219 atcatcgagctcgagaaggcccgccaatggaaggggctggagctcatcccgtcggagaac 278 || || |||| ||||| || | ||||||||||| || || || || || || |||||| Sbjct: 300 attattgagcatgagaaagctagacaatggaagggacttgaacttattccatctgagaac 359 Query: 279 ttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgag 338 ||||| || ||||||||||||| || || || || |||||||| ||||| ||||| || Sbjct: 360 ttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatacagtgaa 419 Query: 339 gggtaccccggcgccagatactacggtggaaacgaatacattgatatggccgagacgctg 398 || || || || ||||||||||| || ||||| || || || || ||||| || || | Sbjct: 420 ggctatcctggtgccagatactatggaggaaatgagtatatagacatggcagaaacctta 479 Query: 399 tgccagaaacgtgctttggaggccttcaatttggacccggagaagtggggagtgaatgtg 458 |||||||| || ||| | || || ||| || || || || ||||||||||||||||| Sbjct: 480 tgccagaagcgcgctcttgaagctttccggttagatcctgaaaagtggggagtgaatgtt 539 Query: 459 caacctctgtcgggttcacctgccaacttccatgtatacactgctctgctgaagccacat 518 |||||| |||| || || ||||||||||||||||| |||||||| || | ||||| ||| Sbjct: 540 caacctttgtctggatctcctgccaacttccatgtgtacactgcattgttaaagcctcat 599 Query: 519 gacagaattatggccctggatcttcctcacggtggacatctttcccatggttaccagact 578 || ||||| ||||| || |||||||||| ||||| |||||||| |||||||| |||||| Sbjct: 600 gaaagaatcatggcacttaatcttcctcatggtggtcatctttctcatggttatcagact 659 Query: 579 gacacaaagaaaatctcagcagtttcaatattctttga 616 ||||| ||||| || ||||| || || || |||||||| Sbjct: 660 gacaccaagaagatatcagctgtgtctatcttctttga 697
>emb|Z25860.1|FPGHMT2 Flaveria pringlei mRNA for glycine hydroxymethyltransferase Length = 1779 Score = 153 bits (77), Expect = 8e-34 Identities = 329/413 (79%) Strand = Plus / Plus Query: 207 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 266 |||||||| || || || ||||| || ||||| || ||||||||||| || || ||||| Sbjct: 208 gagattgctgatattattgagcttgaaaaggctcggcaatggaagggtcttgaactcata 267 Query: 267 ccgtcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaac 326 | || |||||||| ||||||||||| |||||||| || || ||||| || ||||| ||| Sbjct: 268 ctctcagagaactttacctccctgtcagtgatgcaagcagttggatctgtgatgactaac 327 Query: 327 aagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatg 386 || ||||| || ||||| || || || |||||||| |||||||| || |||||||| ||| Sbjct: 328 aaatacagtgaagggtatccgggtgctagatactatggtggaaatgagtacattgacatg 387 Query: 387 gccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgg 446 || || || |||| ||||| ||||| ||||| ||||| || || | | || ||| Sbjct: 388 gcggaaaccttgtgtcagaagcgtgccttggaagcctttcggttagatgctgcaaaatgg 447 Query: 447 ggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctg 506 |||||||||||||||||||| || || ||||| || || |||||||| || ||||| | Sbjct: 448 ggagtgaatgtgcaacctctttcagggtcaccagcaaatttccatgtctatactgcatta 507 Query: 507 ctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccat 566 | ||| | ||||||||||| ||||| || ||||||||||| ||||| ||||| || ||| Sbjct: 508 ttaaaggctcatgacagaatcatggcacttgatcttcctcatggtggccatctgtcacat 567 Query: 567 ggttaccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||| |||||||| |||||||| || || ||||| || ||||| || ||||| Sbjct: 568 ggttatcagactgatacaaagaagatatctgcagtatccatatttttcgagac 620
>gb|BT013569.1| Lycopersicon esculentum clone 132307R, mRNA sequence Length = 1923 Score = 125 bits (63), Expect = 2e-25 Identities = 303/383 (79%) Strand = Plus / Plus Query: 207 gagattgccgacatcatcgagctcgagaaggcccgccaatggaaggggctggagctcatc 266 |||||||||||||| || |||| ||||| || | ||||||||||| || ||||| ||| Sbjct: 223 gagattgccgacattattgagcatgagaaagctaggcaatggaagggtcttgagcttatc 282 Query: 267 ccgtcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaac 326 || || ||||| || || || ||||| |||||||| || || ||||| || ||||| ||| Sbjct: 283 ccttcagagaattttacatcactgtcagtgatgcaagcagttggatcagtaatgaccaac 342 Query: 327 aagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgatatg 386 || ||||| || ||||| || || || |||||||| || ||||| || || ||||| ||| Sbjct: 343 aaatacagtgaagggtatcctggtgctagatactatggaggaaatgagtatattgacatg 402 Query: 387 gccgagacgctgtgccagaaacgtgctttggaggccttcaatttggacccggagaagtgg 446 || |||| |||| || |||||||| |||| | || |||||||| || | || ||| Sbjct: 403 gcagagagattgtgtcaaaaacgtgcactggaagtttttaatttggatcctgccaaatgg 462 Query: 447 ggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctg 506 ||||| ||||| || | |||| || || ||| | || || || || ||||||||| | Sbjct: 463 ggagtcaatgttcagtcattgtctggatctccttcaaattttcaagtgtacactgcttta 522 Query: 507 ctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccat 566 | ||||| ||||| ||||||||||| || ||||||||||| |||||||||||||| ||| Sbjct: 523 ttaaagcctcatgagagaattatggcgctagatcttcctcatggtggacatctttcacat 582 Query: 567 ggttaccagactgacacaaagaa 589 ||||| ||||||||||||||||| Sbjct: 583 ggttatcagactgacacaaagaa 605
>emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 88 Length = 198493 Score = 101 bits (51), Expect = 3e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 ||||||||| |||||| |||| || || ||||||||||||||||| |||||||| || | Sbjct: 136198 agtgaatgttcaacctttgtctggatctcctgccaacttccatgtgtacactgcattgtt 136139 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||||| ||||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 136138 aaagcctcatgaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatgg 136079 Query: 569 tta 571 ||| Sbjct: 136078 tta 136076 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 273 gagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtac 332 ||||||||||| || ||||||||||||| || || || || |||||||| ||||| ||| Sbjct: 136557 gagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatac 136498 Query: 333 agcgaggggtaccccggcgccagatactacggtggaaa 370 || || || || || || ||||||||||| || ||||| Sbjct: 136497 agtgaaggctatcctggtgccagatactatggaggaaa 136460
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 101 bits (51), Expect = 3e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 ||||||||| |||||| |||| || || ||||||||||||||||| |||||||| || | Sbjct: 21783 agtgaatgttcaacctttgtctggatctcctgccaacttccatgtgtacactgcattgtt 21724 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||||| ||||| ||||| ||||| || ||||||||||| ||||| |||||||| ||||| Sbjct: 21723 aaagcctcatgaaagaatcatggcacttgatcttcctcatggtggtcatctttctcatgg 21664 Query: 569 tta 571 ||| Sbjct: 21663 tta 21661 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 273 gagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtac 332 ||||||||||| || ||||||||||||| || || || || |||||||| ||||| ||| Sbjct: 22142 gagaacttcacatctgtgtcggtgatgcaagctgttgggtctgtcatgactaacaaatac 22083 Query: 333 agcgaggggtaccccggcgccagatactacggtggaaa 370 || || || || || || ||||||||||| || ||||| Sbjct: 22082 agtgaaggctatcctggtgccagatactatggaggaaa 22045
>gb|M87649.1|PEASHMTA Pisum sativum serine hydroxymethyltransferase mRNA, complete cds Length = 1803 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 ||||||||||||||||| |||||||| ||||| ||| | ||||| || || |||||||| Sbjct: 442 tggggagtgaatgtgcagcctctgtctggttcgccttcaaactttcaagtttacactgca 501 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || |||| || ||||| ||||| ||||| || ||||| ||||| || || |||||||| Sbjct: 502 ttgttgaaacctcatgatagaatcatggcacttgatctccctcatggagggcatctttct 561 Query: 564 catggttaccagactgacacaaagaaaatctcagcagtttcaatattctttgagac 619 ||||| |||||||| ||||| || || || || ||||| || ||||| |||||||| Sbjct: 562 catggataccagaccgacaccaaaaagatatctgcagtctctatattttttgagac 617
>ref|NM_180750.1| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.2 mRNA, complete cds Length = 1966 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 |||||||| |||||||| || | || || ||||| || || ||||| || |||||||| Sbjct: 522 tggggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgca 581 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || ||||||| ||||| ||||| ||||| || ||| | ||||| |||||||||||||| Sbjct: 582 ttgttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttct 641 Query: 564 catggttaccagactgacacaaagaaaat 592 |||||||| ||||||||||| |||||||| Sbjct: 642 catggttatcagactgacacgaagaaaat 670 Score = 48.1 bits (24), Expect = 0.035 Identities = 120/152 (78%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 ||||||||||| | || || || ||||| ||||| ||||| || || || |||||||| Sbjct: 321 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 380 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 381 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 440 Query: 363 ggtggaaacgaatacattgatatggccgagac 394 || ||||| || |||||||| ||||| ||||| Sbjct: 441 ggaggaaatgagtacattgacatggctgagac 472
>ref|NM_122560.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.3 mRNA, complete cds Length = 2072 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 |||||||| |||||||| || | || || ||||| || || ||||| || |||||||| Sbjct: 522 tggggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgca 581 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || ||||||| ||||| ||||| ||||| || ||| | ||||| |||||||||||||| Sbjct: 582 ttgttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttct 641 Query: 564 catggttaccagactgacacaaagaaaat 592 |||||||| ||||||||||| |||||||| Sbjct: 642 catggttatcagactgacacgaagaaaat 670 Score = 48.1 bits (24), Expect = 0.035 Identities = 120/152 (78%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 ||||||||||| | || || || ||||| ||||| ||||| || || || |||||||| Sbjct: 321 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 380 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 381 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 440 Query: 363 ggtggaaacgaatacattgatatggccgagac 394 || ||||| || |||||||| ||||| ||||| Sbjct: 441 ggaggaaatgagtacattgacatggctgagac 472
>ref|NM_180749.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT5G26780 transcript variant AT5G26780.1 mRNA, complete cds Length = 1962 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 |||||||| |||||||| || | || || ||||| || || ||||| || |||||||| Sbjct: 522 tggggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgca 581 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || ||||||| ||||| ||||| ||||| || ||| | ||||| |||||||||||||| Sbjct: 582 ttgttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttct 641 Query: 564 catggttaccagactgacacaaagaaaat 592 |||||||| ||||||||||| |||||||| Sbjct: 642 catggttatcagactgacacgaagaaaat 670 Score = 48.1 bits (24), Expect = 0.035 Identities = 120/152 (78%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 ||||||||||| | || || || ||||| ||||| ||||| || || || |||||||| Sbjct: 321 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 380 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 381 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 440 Query: 363 ggtggaaacgaatacattgatatggccgagac 394 || ||||| || |||||||| ||||| ||||| Sbjct: 441 ggaggaaatgagtacattgacatggctgagac 472
>gb|BT001097.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 |||||||| |||||||| || | || || ||||| || || ||||| || |||||||| Sbjct: 418 tggggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgca 477 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || ||||||| ||||| ||||| ||||| || ||| | ||||| |||||||||||||| Sbjct: 478 ttgttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttct 537 Query: 564 catggttaccagactgacacaaagaaaat 592 |||||||| ||||||||||| |||||||| Sbjct: 538 catggttatcagactgacacgaagaaaat 566 Score = 48.1 bits (24), Expect = 0.035 Identities = 120/152 (78%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 ||||||||||| | || || || ||||| ||||| ||||| || || || |||||||| Sbjct: 217 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 276 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 277 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 336 Query: 363 ggtggaaacgaatacattgatatggccgagac 394 || ||||| || |||||||| ||||| ||||| Sbjct: 337 ggaggaaatgagtacattgacatggctgagac 368
>ref|XM_503153.1| Yarrowia lipolytica CLIB122, YALI0D22484g predicted mRNA Length = 1446 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 264 atcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacg 323 ||||||||||| ||||||||||| | | | || ||| | ||| |||| ||||||||| | Sbjct: 175 atcccgtcggaaaacttcacctcgcaggccgtcatgaacgccctgggctccgtcatgcag 234 Query: 324 aacaagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgat 383 ||||||||| ||||| ||||| |||||| ||||||||||||| ||||| | ||||||| Sbjct: 235 aacaagtactctgagggctaccctggcgcccgatactacggtggtaacgagttcattgat 294 Query: 384 atggccgagacgctgtgccagaaacgtgctttggaggccttcaatttggaccc 436 ||||||| | ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 295 caggccgagtctctgtgccagaagcgagccctggaggcgttcaacctggaccc 347
>gb|AY035117.1| Arabidopsis thaliana putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1933 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 |||||||| |||||||| || | || || ||||| || || ||||| || |||||||| Sbjct: 521 tggggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgca 580 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || ||||||| ||||| ||||| ||||| || ||| | ||||| |||||||||||||| Sbjct: 581 ttgttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttct 640 Query: 564 catggttaccagactgacacaaagaaaat 592 |||||||| ||||||||||| |||||||| Sbjct: 641 catggttatcagactgacacgaagaaaat 669 Score = 48.1 bits (24), Expect = 0.035 Identities = 120/152 (78%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 ||||||||||| | || || || ||||| ||||| ||||| || || || |||||||| Sbjct: 320 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 379 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 380 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 439 Query: 363 ggtggaaacgaatacattgatatggccgagac 394 || ||||| || |||||||| ||||| ||||| Sbjct: 440 ggaggaaatgagtacattgacatggctgagac 471
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Plus Query: 264 atcccgtcggagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacg 323 ||||||||||| ||||||||||| | | | || ||| | ||| |||| ||||||||| | Sbjct: 2873281 atcccgtcggaaaacttcacctcgcaggccgtcatgaacgccctgggctccgtcatgcag 2873340 Query: 324 aacaagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattgat 383 ||||||||| ||||| ||||| |||||| ||||||||||||| ||||| | ||||||| Sbjct: 2873341 aacaagtactctgagggctaccctggcgcccgatactacggtggtaacgagttcattgat 2873400 Query: 384 atggccgagacgctgtgccagaaacgtgctttggaggccttcaatttggaccc 436 ||||||| | ||||||||||| || || ||||||| ||||| ||||||| Sbjct: 2873401 caggccgagtctctgtgccagaagcgagccctggaggcgttcaacctggaccc 2873453
>gb|BT001113.1| Arabidopsis thaliana clone C104687 (D) putative glycine hydroxymethyltransferase (At5g26780) mRNA, complete cds Length = 1633 Score = 89.7 bits (45), Expect = 1e-14 Identities = 123/149 (82%) Strand = Plus / Plus Query: 444 tggggagtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgct 503 |||||||| |||||||| || | || || ||||| || || ||||| || |||||||| Sbjct: 418 tggggagtcaatgtgcagtctttatcaggatcaccagctaatttccaagtttacactgca 477 Query: 504 ctgctgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcc 563 || ||||||| ||||| ||||| ||||| || ||| | ||||| |||||||||||||| Sbjct: 478 ttgttgaagcctcatgaaagaatcatggcacttgatttacctcatggtggacatctttct 537 Query: 564 catggttaccagactgacacaaagaaaat 592 |||||||| ||||||||||| |||||||| Sbjct: 538 catggttatcagactgacacgaagaaaat 566 Score = 48.1 bits (24), Expect = 0.035 Identities = 120/152 (78%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 ||||||||||| | || || || ||||| ||||| ||||| || || || |||||||| Sbjct: 217 caatggaagggatttgaacttataccgtcagagaatttcacttctctatctgtgatgcaa 276 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 ||||| || || || ||||| || ||||| || || || ||||| || || |||||||| Sbjct: 277 gccgttggttctgttatgactaataagtatagtgaaggataccctggagctagatactat 336 Query: 363 ggtggaaacgaatacattgatatggccgagac 394 || ||||| || |||||||| ||||| ||||| Sbjct: 337 ggaggaaatgagtacattgacatggctgagac 368
>gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete sequence Length = 113964 Score = 85.7 bits (43), Expect = 2e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||| ||||| ||| |||| ||||||||| | || || ||||| |||||||| || | Sbjct: 56204 agtgaacgtgcagcctttgtctggttcaccttcaaattttcatgtttacactgcattgtt 56263 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 ||| || ||||||||||| ||||| || ||||| ||||| || ||||||||||| ||||| Sbjct: 56264 gaaacctcatgacagaatcatggcacttgatctccctcatggaggacatctttctcatgg 56323 Query: 569 ttaccag 575 ||||||| Sbjct: 56324 ttaccag 56330
>gb|AF442558.1| Chlamydomonas reinhardtii serine hydroxymethyltransferase (shmt) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2025 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 249 aaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgtg 308 ||||| |||||||| ||||| |||||||||||| || ||||||||| |||| ||| Sbjct: 254 aagggcctggagctgatcccctcggagaacttcgtgtctgcctcggtgatggaggcggtg 313 Query: 309 ggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtgga 368 || ||||||||| ||||||||||||||||| |||||||||||| | |||||||| || Sbjct: 314 ggcagcgtcatgaccaacaagtacagcgagggctaccccggcgcccgctactacggcggc 373 Query: 369 aacgaatacattga 382 ||||| | |||||| Sbjct: 374 aacgagttcattga 387
>gb|DQ139269.1| Medicago truncatula serine hydroxymethyltransferase mRNA, complete cds Length = 1524 Score = 71.9 bits (36), Expect = 2e-09 Identities = 141/176 (80%) Strand = Plus / Plus Query: 243 caatggaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcag 302 |||||||||||||| ||||| || || || || || || || || ||||||||||||| Sbjct: 187 caatggaaggggctagagcttataccatcagaaaattttacgtcgttgtcggtgatgcaa 246 Query: 303 gccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactac 362 || || ||||| || |||||||| || ||||| || || || || || || |||||||| Sbjct: 247 gcggttggatcggttatgacgaataaatacagtgaaggttatcctggtgctagatactat 306 Query: 363 ggtggaaacgaatacattgatatggccgagacgctgtgccagaaacgtgctttgga 418 |||||||| || |||||||| ||||| ||||| |||| ||||| ||||| ||||| Sbjct: 307 ggtggaaatgagtacattgacatggctgagactttgtgtcagaagcgtgcattgga 362 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Plus Query: 483 aacttccatgtatacactgctctgctgaagccacatgacagaattatggccctggatctt 542 |||||||| || ||||||||| | |||| || ||||| ||||||||||| || ||||| Sbjct: 433 aacttccaagtttacactgctttattgaaacctcatgagagaattatggcacttgatctc 492 Query: 543 cctcacggtggacatctttcccatgg 568 || || ||||| ||||| || ||||| Sbjct: 493 ccccatggtgggcatctatcacatgg 518
>dbj|AP004579.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT11E23, TM0557 Length = 87695 Score = 69.9 bits (35), Expect = 9e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||||||||| ||| |||| ||||| ||| |||| || ||||| || ||||| |||| Sbjct: 4351 agtgaatgtgcagcctttgtctggttctccttccaattttcatgtttatactgcattgct 4410 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 || || ||||| ||||| ||||| || ||||||||||| || || |||||||| || || Sbjct: 4411 aaaacctcatgatagaatcatggcacttgatcttcctcatggagggcatctttctcacgg 4470 Query: 569 ttaccag 575 ||||||| Sbjct: 4471 ttaccag 4477 Score = 54.0 bits (27), Expect = 6e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 248 gaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgt 307 ||||||||||||||| || || || ||||| ||||| || || || || ||||| || || Sbjct: 3540 gaaggggctggagctgataccctcagagaatttcacttctctctctgtaatgcaagctgt 3599 Query: 308 gggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtgg 367 || || |||||||| ||||| ||||| || || || ||||| || |||||||| ||||| Sbjct: 3600 tggctctgtcatgacaaacaaatacagtgaaggatatcccggtgcaagatactatggtgg 3659 Query: 368 aaa 370 ||| Sbjct: 3660 aaa 3662
>dbj|AP004578.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H01, TM0541, complete sequence Length = 110985 Score = 69.9 bits (35), Expect = 9e-09 Identities = 104/127 (81%) Strand = Plus / Plus Query: 449 agtgaatgtgcaacctctgtcgggttcacctgccaacttccatgtatacactgctctgct 508 |||||||||||| ||| |||| ||||| ||| |||| || ||||| || ||||| |||| Sbjct: 91954 agtgaatgtgcagcctttgtctggttctccttccaattttcatgtttatactgcattgct 92013 Query: 509 gaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatgg 568 || || ||||| ||||| ||||| || ||||||||||| || || |||||||| || || Sbjct: 92014 aaaacctcatgatagaatcatggcacttgatcttcctcatggagggcatctttctcacgg 92073 Query: 569 ttaccag 575 ||||||| Sbjct: 92074 ttaccag 92080 Score = 54.0 bits (27), Expect = 6e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 248 gaaggggctggagctcatcccgtcggagaacttcacctccctgtcggtgatgcaggccgt 307 ||||||||||||||| || || || ||||| ||||| || || || || ||||| || || Sbjct: 91143 gaaggggctggagctgataccctcagagaatttcacttctctctctgtaatgcaagctgt 91202 Query: 308 gggatccgtcatgacgaacaagtacagcgaggggtaccccggcgccagatactacggtgg 367 || || |||||||| ||||| ||||| || || || ||||| || |||||||| ||||| Sbjct: 91203 tggctctgtcatgacaaacaaatacagtgaaggatatcccggtgcaagatactatggtgg 91262 Query: 368 aaa 370 ||| Sbjct: 91263 aaa 91265
>emb|BX830710.1|CNS09YQU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1960 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 508 tgaagccacatgacagaattatggccctggatcttcctcacggtggacatctttcccatg 567 ||||||| ||||| ||| | ||||| || ||| | ||||| |||||||||||||| |||| Sbjct: 579 tgaagcctcatgagagattcatggcacttgatttacctcatggtggacatctttctcatg 638 Query: 568 gttaccagactgacacaaagaa 589 |||| ||||||||||| ||||| Sbjct: 639 gttatcagactgacacgaagaa 660
>emb|AJ871334.1| Nyctotherus ovalis partial gene for serine hydroxymethyltransferase precursor Length = 1320 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 319 tgacgaacaagtacagcgaggggtaccccggcgccagatactacggtggaaacgaa 374 ||||||||||||||||||| || |||||| ||||||||||||||| || |||||| Sbjct: 373 tgacgaacaagtacagcgaaggctaccccaacgccagatactacggcggcaacgaa 428 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 agaagtggggagtgaatgtgca 460 |||||||||||||||||||||| Sbjct: 493 agaagtggggagtgaatgtgca 514
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 486 ttccatgtatacactgctctgctgaagccacatgacagaattatggccctggatcttcct 545 ||||| || |||||||| || ||||||| ||||| ||||| ||||| || ||| | ||| Sbjct: 20623 ttccaagtttacactgcattgttgaagcctcatgaaagaatcatggcacttgatttacct 20682 Query: 546 cacggtggacatctttcccatggtta 571 || |||||||||||||| |||||||| Sbjct: 20683 catggtggacatctttctcatggtta 20708
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 53 catggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||| Sbjct: 74072 catggcgacggcgctccgcaagctctcc 74045
>ref|XM_504017.1| Yarrowia lipolytica CLIB122, YALI0E16346g predicted mRNA Length = 1416 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 324 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 367 ||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 187 aacaagtactccgagggataccccggcgcccgatactacggtgg 230
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 53 catggcgacggcgctccgcaagctctcc 80 |||||||||||||||||||||||||||| Sbjct: 19473360 catggcgacggcgctccgcaagctctcc 19473333
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 ||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 26702781 ggcgtgcctgccggcgatggaggagagatccggagtcacc 26702742
>dbj|AP003294.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0694A04 Length = 141476 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 ||||| ||||||||||| |||||||||||||| ||||||| Sbjct: 49873 ggcgtgcctgccggcgatggaggagagatccggagtcacc 49834
>gb|AY616084.1| Prototheca wickerhamii plastid glycine hydroxymethyltransferase mRNA, partial cds; nuclear gene for plastid product Length = 657 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 273 gagaacttcacctccctgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtac 332 ||||||||||| |||| | |||||||| ||| ||||| ||| |||||| ||||||||| Sbjct: 302 gagaacttcacgtcccgggcggtgatgacggcggtgggctcctgcatgaccaacaagtac 361 Query: 333 agcgaggg 340 |||||||| Sbjct: 362 agcgaggg 369
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 324 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 367 ||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 1943290 aacaagtactccgagggataccccggcgcccgatactacggtgg 1943247
>emb|AJ438778.1|EGO438778 Eremothecium gossypii SHM1 gene for serine hydroxymethyltransferase Length = 2837 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 537 gatcttcctcacggtggacatctttcccatggttaccag 575 ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 1075 gatcttcctcacggtggccatctgtcccacggttaccag 1113
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 537 gatcttcctcacggtggacatctttcccatggttaccag 575 ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 283879 gatcttcctcacggtggccatctgtcccacggttaccag 283917
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tggccatggcgacggcgctccgcaagctctc 79 ||||||| ||||||||||||||||||||||| Sbjct: 7238732 tggccatcgcgacggcgctccgcaagctctc 7238702 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 258 gagctcatcccgtcggagaacttcacctc 286 ||||||||| ||||||||||||||||||| Sbjct: 12440571 gagctcatcgcgtcggagaacttcacctc 12440543
>ref|NM_210026.1| Eremothecium gossypii AEL188Wp (AEL188W), mRNA Length = 1494 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 537 gatcttcctcacggtggacatctttcccatggttaccag 575 ||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 466 gatcttcctcacggtggccatctgtcccacggttaccag 504
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tggccatggcgacggcgctccgcaagctctc 79 ||||||| ||||||||||||||||||||||| Sbjct: 7238611 tggccatcgcgacggcgctccgcaagctctc 7238581 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 258 gagctcatcccgtcggagaacttcacctc 286 ||||||||| ||||||||||||||||||| Sbjct: 12394941 gagctcatcgcgtcggagaacttcacctc 12394913
>emb|AL954160.5|CNS08CCY Oryza sativa chromosome 12, . BAC OSJNBb0078J08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121243 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 49 tggccatggcgacggcgctccgcaagctctc 79 ||||||| ||||||||||||||||||||||| Sbjct: 17374 tggccatcgcgacggcgctccgcaagctctc 17404
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 49 tggccatggcgacggcgctccgcaagctctc 79 ||||||| ||||||||||||||||||||||| Sbjct: 95045 tggccatcgcgacggcgctccgcaagctctc 95015
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctc 286 ||||||||| ||||||||||||||||||| Sbjct: 381 gagctcatcgcgtcggagaacttcacctc 409
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 258 gagctcatcccgtcggagaacttcacctc 286 ||||||||| ||||||||||||||||||| Sbjct: 154936 gagctcatcgcgtcggagaacttcacctc 154908
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 258 gagctcatcccgtcggagaacttcacctc 286 ||||||||| ||||||||||||||||||| Sbjct: 42049 gagctcatcgcgtcggagaacttcacctc 42021
>ref|XM_954825.1| Neurospora crassa OR74A SERINE HYDROXYMETHYLTRANSFERASE, CYTOSOLIC (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT) (NCU02274.1) partial mRNA Length = 1443 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 546 cacggtggacatctttcccatggttaccagac 577 |||||||| ||||||||||| ||||||||||| Sbjct: 409 cacggtggccatctttcccacggttaccagac 440
>ref|XM_331049.1| Neurospora crassa OR74A SERINE HYDROXYMETHYLTRANSFERASE, CYTOSOLIC (SERINE METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT) (NCU02274.1) partial mRNA Length = 1443 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 546 cacggtggacatctttcccatggttaccagac 577 |||||||| ||||||||||| ||||||||||| Sbjct: 409 cacggtggccatctttcccacggttaccagac 440
>gb|AC104097.5| Mus musculus BAC clone RP24-372E2 from 10, complete sequence Length = 140363 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 577 ctgacacaaagaaaatctcagcag 600 |||||||||||||||||||||||| Sbjct: 124713 ctgacacaaagaaaatctcagcag 124736
>gb|AC153871.5| Mus musculus 10 BAC RP23-402I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186142 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 577 ctgacacaaagaaaatctcagcag 600 |||||||||||||||||||||||| Sbjct: 66875 ctgacacaaagaaaatctcagcag 66898
>emb|BX908789.1| Neurospora crassa DNA linkage group VII BAC clone B13D24 Length = 107482 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 546 cacggtggacatctttcccatggttaccagac 577 |||||||| ||||||||||| ||||||||||| Sbjct: 23240 cacggtggccatctttcccacggttaccagac 23209
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 ||||| ||||||||||| ||| |||||||||| ||||||| Sbjct: 2199155 ggcgtgcctgccggcgatggaagagagatccggagtcacc 2199116 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 9469716 gacggcgctccgcaagctctcc 9469695 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 1316599 gacggcgctccgcaagctctcc 1316578
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 48.1 bits (24), Expect = 0.035 Identities = 36/40 (90%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacggaggagagatccgcagtcacc 164 ||||| ||||||||||| ||| |||||||||| ||||||| Sbjct: 77417 ggcgtgcctgccggcgatggaagagagatccggagtcacc 77378
>gb|M81918.1|NEUSERHMT Neurospora crassa serine hydroxymethyltransferase gene, complete cds; mitochondrial gene for mitochondrial product Length = 2856 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 546 cacggtggacatctttcccatggttaccagac 577 |||||||| ||||||||||| ||||||||||| Sbjct: 1065 cacggtggccatctttcccacggttaccagac 1096
>gb|BC066496.1| Danio rerio serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:77524 IMAGE:6525877), complete cds Length = 1788 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgt 457 ||||||||||| |||||||||||||| Sbjct: 364 gacccggagaaatggggagtgaatgt 389
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctcc 287 ||||||||| | |||||||||||||||||| Sbjct: 84026 gagctcatcgcctcggagaacttcacctcc 84055
>ref|NM_201046.1| Danio rerio serine hydroxymethyltransferase 1 (soluble) (shmt1), mRNA Length = 1797 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgt 457 ||||||||||| |||||||||||||| Sbjct: 377 gacccggagaaatggggagtgaatgt 402
>ref|XM_447650.1| Candida glabrata CBS138 hypothetical protein (CAGL0I09284g) partial mRNA Length = 1458 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Plus Query: 323 gaacaagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattga 382 |||||||||| |||||| |||||||||| || ||||||||||| ||| | | ||| || Sbjct: 213 gaacaagtactccgagggctaccccggcgagaggtactacggtggtaaccagttcatcga 272 Query: 383 tatggccgagacgctgtgccag 404 || || ||| ||||||||||| Sbjct: 273 taaagctgagtcgctgtgccag 294
>gb|AY850381.1| Danio rerio serine hydroxymethyltransferase mRNA, complete cds Length = 1446 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgt 457 ||||||||||| |||||||||||||| Sbjct: 310 gacccggagaaatggggagtgaatgt 335
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Plus Query: 323 gaacaagtacagcgaggggtaccccggcgccagatactacggtggaaacgaatacattga 382 |||||||||| |||||| |||||||||| || ||||||||||| ||| | | ||| || Sbjct: 895691 gaacaagtactccgagggctaccccggcgagaggtactacggtggtaaccagttcatcga 895750 Query: 383 tatggccgagacgctgtgccag 404 || || ||| ||||||||||| Sbjct: 895751 taaagctgagtcgctgtgccag 895772
>gb|BC055527.1| Danio rerio serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone MGC:66171 IMAGE:5601618), complete cds Length = 1797 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgt 457 ||||||||||| |||||||||||||| Sbjct: 377 gacccggagaaatggggagtgaatgt 402
>gb|AC068668.10| Homo sapiens chromosome 8, clone RP11-574K13, complete sequence Length = 69146 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 438 gagaagtggggagtgaatgtgcaacc 463 ||||||||| |||||||||||||||| Sbjct: 12909 gagaagtggtgagtgaatgtgcaacc 12934
>gb|AC025856.13| Homo sapiens chromosome 8, clone RP11-430K7, complete sequence Length = 167416 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 438 gagaagtggggagtgaatgtgcaacc 463 ||||||||| |||||||||||||||| Sbjct: 96793 gagaagtggtgagtgaatgtgcaacc 96818
>gb|AC022709.7| Homo sapiens chromosome 8, clone RP11-88H1, complete sequence Length = 164290 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 438 gagaagtggggagtgaatgtgcaacc 463 ||||||||| |||||||||||||||| Sbjct: 42510 gagaagtggtgagtgaatgtgcaacc 42485
>gb|AC068349.6| Homo sapiens chromosome 8, clone RP11-696J24, complete sequence Length = 186012 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 438 gagaagtggggagtgaatgtgcaacc 463 ||||||||| |||||||||||||||| Sbjct: 147578 gagaagtggtgagtgaatgtgcaacc 147603
>emb|BX649440.3| Zebrafish DNA sequence from clone CH211-198M12 in linkage group 3, complete sequence Length = 29954 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgt 457 ||||||||||| |||||||||||||| Sbjct: 10311 gacccggagaaatggggagtgaatgt 10336
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctcc 287 ||||||||| | |||||||||||||||||| Sbjct: 14860959 gagctcatcgcctcggagaacttcacctcc 14860988
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 9870462 gacggcgctccgcaagctctcc 9870441
>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_D12 Length = 97572 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 94307 gacggcgctccgcaagctctcc 94286
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073J19 Length = 165174 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 145906 gacggcgctccgcaagctctcc 145885
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 160704 gacggcgctccgcaagctctcc 160683
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 67097 gacggcgctccgcaagctctcc 67076
>gb|BC049518.1| Danio rerio serine hydroxymethyltransferase 1 (soluble), mRNA (cDNA clone IMAGE:5916288), partial cds Length = 1465 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgt 457 ||||||||||| |||||||||||||| Sbjct: 363 gacccggagaaatggggagtgaatgt 388
>dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1126_D10 Length = 90631 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 gacggcgctccgcaagctctcc 80 |||||||||||||||||||||| Sbjct: 8956 gacggcgctccgcaagctctcc 8935
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctcc 287 ||||||||| | |||||||||||||||||| Sbjct: 183 gagctcatcgcctcggagaacttcacctcc 212
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctcc 287 ||||||||| | |||||||||||||||||| Sbjct: 184 gagctcatcgcctcggagaacttcacctcc 213
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctcc 287 ||||||||| | |||||||||||||||||| Sbjct: 184 gagctcatcgcctcggagaacttcacctcc 213
>emb|CR962125.2| Medicago truncatula chromosome 5 clone mth2-179a9, COMPLETE SEQUENCE Length = 113972 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Plus Query: 483 aacttccatgtatacactgctctgctgaagccacatgacagaattatggccctggatctt 542 |||||||| || ||||||||| | |||| || ||||| ||||||||||| || ||||| Sbjct: 17109 aacttccaagtttacactgctttattgaaacctcatgagagaattatggcacttgatctc 17168 Query: 543 cctcacggtggacatctttcccatgg 568 || || ||||| ||||| || ||||| Sbjct: 17169 ccccatggtgggcatctatcacatgg 17194 Score = 44.1 bits (22), Expect = 0.54 Identities = 67/82 (81%) Strand = Plus / Plus Query: 289 tgtcggtgatgcaggccgtgggatccgtcatgacgaacaagtacagcgaggggtaccccg 348 ||||||||||||| || || ||||| || |||||||| || ||||| || || || || | Sbjct: 15238 tgtcggtgatgcaagcggttggatcggttatgacgaataaatacagtgaaggttatcctg 15297 Query: 349 gcgccagatactacggtggaaa 370 | || |||||||| |||||||| Sbjct: 15298 gtgctagatactatggtggaaa 15319 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 573 cagactgacacaaagaaaatctcagcagtttcaatattctttga 616 ||||||||||| ||||| || ||||| || || ||||||||||| Sbjct: 18165 cagactgacaccaagaagatatcagctgtatctatattctttga 18208
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 258 gagctcatcccgtcggagaacttcacctcc 287 ||||||||| | |||||||||||||||||| Sbjct: 14940927 gagctcatcgcctcggagaacttcacctcc 14940956
>emb|AL450338.5| Human DNA sequence from clone RP11-207F8 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, complete sequence Length = 149216 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 aagtggggagtgaatgtgcaacctc 465 |||||| |||||||||||||||||| Sbjct: 5100 aagtggtgagtgaatgtgcaacctc 5124
>emb|BX664715.25| Zebrafish DNA sequence from clone DKEY-83M2 in linkage group 6, complete sequence Length = 231173 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 551 tggacatctttcccatggttaccag 575 |||||| |||||||||||||||||| Sbjct: 187268 tggacaactttcccatggttaccag 187244
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 gattgccgacatcatcgagct 229 ||||||||||||||||||||| Sbjct: 2021081 gattgccgacatcatcgagct 2021061
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 caacgcgccgctggaggaggt 199 ||||||||||||||||||||| Sbjct: 1128134 caacgcgccgctggaggaggt 1128154
>dbj|AK111207.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-G02, full insert sequence Length = 2754 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 335 cgaggggtaccccggcgccagatactacggtggaaacgaatacattgat 383 |||||| |||||||| ||| | ||||||||||| ||||| |||||||| Sbjct: 1270 cgagggctaccccggtgcccgctactacggtggcaacgagcacattgat 1318
>gb|AC168117.2| Mus musculus BAC clone RP23-461G13 from chromosome 17, complete sequence Length = 169205 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 atgacagaattatggccctg 536 |||||||||||||||||||| Sbjct: 28256 atgacagaattatggccctg 28275
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 ggaggtcgacccggagattgccga 217 |||||||||||||||||| ||||| Sbjct: 1921123 ggaggtcgacccggagatcgccga 1921100
>ref|XM_848436.1| PREDICTED: Canis familiaris similar to junctophilin 2 isoform 1 (LOC610874), mRNA Length = 1801 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggcgtccctgccggcgacgg 144 |||||||||||||||||||| Sbjct: 1236 ggcgtccctgccggcgacgg 1217
>emb|AL451138.5| Human DNA sequence from clone RP11-152H3 on chromosome 9, complete sequence Length = 117273 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gaagtggggagtgaatgtgcaacc 463 ||||||| |||||||||||||||| Sbjct: 10045 gaagtggtgagtgaatgtgcaacc 10068
>gb|AC095390.9| Rattus norvegicus 12 BAC CH230-7C24 (Children's Hospital Oakland Research Institute) complete sequence Length = 226532 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 aaagaaaatctcagcagttt 603 |||||||||||||||||||| Sbjct: 104958 aaagaaaatctcagcagttt 104977
>gb|DQ399504.1| Ictalurus punctatus clone SFFE07R serine hydroxymethyltransferase mRNA, partial cds Length = 436 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Plus Query: 432 gacccggagaagtggggagtgaatgtgcaacctctgtcgggttcacctgccaactt 487 ||||||||||| ||||| || |||||||| ||| || || |||||||||||||| Sbjct: 373 gacccggagaaatggggtgtaaatgtgcagccttattccgggtcacctgccaactt 428
>dbj|AB225812.1| Aspergillus oryzae cDNA, contig sequence: AoEST2667 Length = 1733 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 534 ctggatcttcctcacggtggacatctttcccatggttaccagac 577 ||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 387 ctggatcttccccacggaggccatctgtcccacggttatcagac 430 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 367 ||||||||| |||||| |||||||| ||| | ||||||||||| Sbjct: 177 aacaagtactccgagggttaccccggtgcccgttactacggtgg 220
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 534 ctggatcttcctcacggtggacatctttcccatggttaccagac 577 ||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 3497964 ctggatcttccccacggaggccatctgtcccacggttatcagac 3498007 Score = 40.1 bits (20), Expect = 8.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 324 aacaagtacagcgaggggtaccccggcgccagatactacggtgg 367 ||||||||| |||||| |||||||| ||| | ||||||||||| Sbjct: 3497754 aacaagtactccgagggttaccccggtgcccgttactacggtgg 3497797
>gb|AC091814.10| Homo sapiens 12p BAC RP11-290C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gaagtggggagtgaatgtgcaacc 463 ||||||| |||||||||||||||| Sbjct: 89962 gaagtggtgagtgaatgtgcaacc 89985
>gb|AC034176.8| Homo sapiens BAC clone RP11-755F5 from 4, complete sequence Length = 193100 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gaagtggggagtgaatgtgcaacc 463 ||||||| |||||||||||||||| Sbjct: 92676 gaagtggtgagtgaatgtgcaacc 92699
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 gagctcatcccgtcggagaacttc 281 ||||||||| |||||||||||||| Sbjct: 1295505 gagctcatcgcgtcggagaacttc 1295482
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 catggcgacggcgctccgcaagctctcc 80 ||||||||||| |||| ||||||||||| Sbjct: 32282703 catggcgacggtgctctgcaagctctcc 32282730
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence Length = 198374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 atgacagaattatggccctg 536 |||||||||||||||||||| Sbjct: 10833 atgacagaattatggccctg 10814
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 catggcgacggcgctccgcaagctctcc 80 ||||||||||| |||| ||||||||||| Sbjct: 126716 catggcgacggtgctctgcaagctctcc 126743
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cgcaagctctccgcccgcgg 88 |||||||||||||||||||| Sbjct: 1445067 cgcaagctctccgcccgcgg 1445048
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 53 catggcgacggcgctccgcaagctctcc 80 ||||||||||| |||| ||||||||||| Sbjct: 58535 catggcgacggtgctctgcaagctctcc 58562
>gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, complete sequence Length = 195017 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gagaacttcacctccctgtc 292 |||||||||||||||||||| Sbjct: 61233 gagaacttcacctccctgtc 61252
>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete sequence Length = 216812 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 ctgacacaaagaaaatctca 596 |||||||||||||||||||| Sbjct: 151036 ctgacacaaagaaaatctca 151017
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 tggaggaggtcgacccggag 209 |||||||||||||||||||| Sbjct: 2278296 tggaggaggtcgacccggag 2278277
>emb|AL137062.13| Human DNA sequence from clone RP11-198M22 on chromosome 6, complete sequence Length = 137272 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 440 gaagtggggagtgaatgtgcaacc 463 ||||||| |||||||||||||||| Sbjct: 39756 gaagtggtgagtgaatgtgcaacc 39733 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,453,619 Number of Sequences: 3902068 Number of extensions: 4453619 Number of successful extensions: 87292 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86086 Number of HSP's gapped (non-prelim): 1199 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
