ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63i12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
2dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
3ref|XM_464669.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-07
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
5dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
6gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome ... 46 0.14
7gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone ... 46 0.14
8ref|NM_105698.4| Arabidopsis thaliana KUP6; potassium ion transp... 42 2.3
9gb|AC109212.15| Mus musculus chromosome 9, clone RP23-329B5, com... 42 2.3
10gb|AF419160.1| Aspergillus sojae leucine aminopeptidase (lap1) g... 42 2.3
11emb|AJ132353.1|PFL132353 Platichthys flesus CYP1A gene, exons 1-7 42 2.3
12gb|AY093328.1| Arabidopsis thaliana similar to high affinity pot... 42 2.3
13gb|AY062542.1| Arabidopsis thaliana Similar to high affinity pot... 42 2.3
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
15emb|BX816687.1|CNS0AELU Arabidopsis thaliana Full-length cDNA Co... 42 2.3
16dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
17dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
18dbj|AK100230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.3
19gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 ... 42 2.3
20gb|BC007202.1| Homo sapiens Meis1, myeloid ecotropic viral integ... 40 8.9
21gb|BC001516.2| Homo sapiens Meis1, myeloid ecotropic viral integ... 40 8.9
22ref|XM_882064.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
23ref|XM_882054.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
24ref|XM_882042.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
25ref|XM_882031.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
26ref|XM_868830.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
27ref|XM_882010.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
28ref|XM_881996.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
29ref|XM_881980.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
30ref|XM_881967.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
31ref|XM_881955.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
32ref|XM_588141.2| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
33ref|XM_881933.1| PREDICTED: Bos taurus similar to Homeobox prote... 40 8.9
34gb|BC001844.2| Homo sapiens Meis1, myeloid ecotropic viral integ... 40 8.9
35gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosom... 40 8.9
36ref|NM_172316.1| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
37ref|NM_172315.1| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
38ref|NM_170677.2| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
39ref|NM_170676.2| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
40ref|NM_170675.2| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
41ref|NM_170674.2| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
42ref|NM_020149.2| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
43ref|NM_002399.2| Homo sapiens Meis1, myeloid ecotropic viral int... 40 8.9
44gb|AC107803.15| Mus musculus chromosome 9, clone RP23-47I9, comp... 40 8.9
45gb|BC050431.1| Homo sapiens Meis1, myeloid ecotropic viral integ... 40 8.9
46gb|AC153643.22| Medicago truncatula clone mth2-109d3, complete s... 40 8.9
47gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, com... 40 8.9
48gb|AC160988.3| Mus musculus BAC clone RP23-236A22 from chromosom... 40 8.9
49dbj|AK056620.1| Homo sapiens cDNA FLJ32058 fis, clone NTONG20016... 40 8.9
50dbj|AK056216.1| Homo sapiens cDNA FLJ31654 fis, clone NT2RI20042... 40 8.9
51dbj|AK056038.1| Homo sapiens cDNA FLJ31476 fis, clone NT2NE20016... 40 8.9
52dbj|AK055936.1| Homo sapiens cDNA FLJ31374 fis, clone NB9N420004... 40 8.9
53dbj|AK001298.1| Homo sapiens cDNA FLJ10436 fis, clone NT2RP10005... 40 8.9
54gb|AC018563.7| Homo sapiens, clone RP11-122D10, complete sequence 40 8.9
55gb|AC022334.66| Homo sapiens 12 BAC RP11-365O10 (Roswell Park Ca... 40 8.9
56gb|AC154590.2| Mus musculus BAC clone RP23-368L2 from chromosome... 40 8.9
57gb|AY044167.1| Homo sapiens clone IMAGE:BE741130 mRNA sequence 40 8.9
58gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, comple... 40 8.9
59gb|AF179899.1|AF179899 Homo sapiens TALE homeobox protein Meis2e... 40 8.9
60gb|AF179898.1|AF179898 Homo sapiens TALE homeobox protein Meis2d... 40 8.9
61gb|AF179897.1|AF179897 Homo sapiens TALE homeobox protein Meis2c... 40 8.9
62gb|AF179896.1|AF179896 Homo sapiens TALE homeobox protein Meis2b... 40 8.9
63gb|AF178948.1|AF178948 Homo sapiens TALE homeobox protein Meis2a... 40 8.9
64dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.9
65gb|AF017418.1|AF017418 Homo sapiens homeobox protein MEIS2 (MEIS... 40 8.9
66dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cy... 40 8.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                            
Query: 54       aggatattatggctccaagatttgcccaatactgtcttaaaagccatgccatgttcttgc 113
                ||||||||| |||||| |||| |||||  ||||||| | ||||| ||||||||||| |||
Sbjct: 21926253 aggatattacggctccgagatgtgccctctactgtcctgaaagctatgccatgttcgtgc 21926194

                                                   
Query: 114      aatgtatttatcgtgtcgcggcacagattaactat 148
                ||||||||| | |||||  |||||||||| |||||
Sbjct: 21926193 aatgtatttgttgtgtccaggcacagattgactat 21926159



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                            
Query: 516      tagatgaagtagcaaaaccgaggaaggagtaccaggatacaccgatgatgtatgtcgaag 575
                |||||||||||||||||| ||| ||||| |  ||||||||     |||||||||   |||
Sbjct: 21925600 tagatgaagtagcaaaactgagaaaggaattgcaggatacgttagtgatgtatgataaag 21925541

                                                
Query: 576      cttgtgaaaatcacgtccatgctaagaaaaag 607
                |||||||| ||| ||||||||| |||||||||
Sbjct: 21925540 cttgtgaagatctcgtccatgccaagaaaaag 21925509
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>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0006A22
          Length = 190690

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                          
Query: 54     aggatattatggctccaagatttgcccaatactgtcttaaaagccatgccatgttcttgc 113
              ||||||||| |||||| |||| |||||  ||||||| | ||||| ||||||||||| |||
Sbjct: 148738 aggatattacggctccgagatgtgccctctactgtcctgaaagctatgccatgttcgtgc 148679

                                                 
Query: 114    aatgtatttatcgtgtcgcggcacagattaactat 148
              ||||||||| | |||||  |||||||||| |||||
Sbjct: 148678 aatgtatttgttgtgtccaggcacagattgactat 148644



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                          
Query: 516    tagatgaagtagcaaaaccgaggaaggagtaccaggatacaccgatgatgtatgtcgaag 575
              |||||||||||||||||| ||| ||||| |  ||||||||     |||||||||   |||
Sbjct: 148085 tagatgaagtagcaaaactgagaaaggaattgcaggatacgttagtgatgtatgataaag 148026

                                              
Query: 576    cttgtgaaaatcacgtccatgctaagaaaaag 607
              |||||||| ||| ||||||||| |||||||||
Sbjct: 148025 cttgtgaagatctcgtccatgccaagaaaaag 147994
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>ref|XM_464669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2610

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                       
Query: 515 atagatgaagtagcaaaaccgaggaaggagtaccaggatacaccgatgatgtatgtcgaa 574
           ||||||||||||||||||| ||||||||| |  ||||||||     ||||||||| | ||
Sbjct: 871 atagatgaagtagcaaaactgaggaaggaattgcaggataccttagtgatgtatgacaaa 930

                                            
Query: 575 gcttgtgaaaatcacgtccatgctaagaaaaag 607
           || |||||| |||  ||||||||||||||||||
Sbjct: 931 gcctgtgaagatcttgtccatgctaagaaaaag 963
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                           
Query: 515     atagatgaagtagcaaaaccgaggaaggagtaccaggatacaccgatgatgtatgtcgaa 574
               ||||||||||||||||||| ||||||||| |  ||||||||     ||||||||| | ||
Sbjct: 6617783 atagatgaagtagcaaaactgaggaaggaattgcaggataccttagtgatgtatgacaaa 6617842

                                                
Query: 575     gcttgtgaaaatcacgtccatgctaagaaaaag 607
               || |||||| |||  ||||||||||||||||||
Sbjct: 6617843 gcctgtgaagatcttgtccatgctaagaaaaag 6617875
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>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0027A02
          Length = 140402

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                         
Query: 515   atagatgaagtagcaaaaccgaggaaggagtaccaggatacaccgatgatgtatgtcgaa 574
             ||||||||||||||||||| ||||||||| |  ||||||||     ||||||||| | ||
Sbjct: 52158 atagatgaagtagcaaaactgaggaaggaattgcaggataccttagtgatgtatgacaaa 52217

                                              
Query: 575   gcttgtgaaaatcacgtccatgctaagaaaaag 607
             || |||||| |||  ||||||||||||||||||
Sbjct: 52218 gcctgtgaagatcttgtccatgctaagaaaaag 52250
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>gb|AC141329.4| Mus musculus BAC clone RP23-63G7 from chromosome 7, complete sequence
          Length = 153106

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 294   aaatcttctgaagttactagttc 316
             |||||||||||||||||||||||
Sbjct: 55108 aaatcttctgaagttactagttc 55086
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>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete
              sequence
          Length = 176639

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 294    aaatcttctgaagttactagttc 316
              |||||||||||||||||||||||
Sbjct: 149104 aaatcttctgaagttactagttc 149126
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>ref|NM_105698.4| Arabidopsis thaliana KUP6; potassium ion transporter AT1G70300 (KUP6)
            mRNA, complete cds
          Length = 2859

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 228  ctaagactgaggagccagttg 248
            |||||||||||||||||||||
Sbjct: 1968 ctaagactgaggagccagttg 1948
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>gb|AC109212.15| Mus musculus chromosome 9, clone RP23-329B5, complete sequence
          Length = 190469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 182   aaatacttacttaaagattgagtca 206
             |||||||||||||||||| ||||||
Sbjct: 31246 aaatacttacttaaagatggagtca 31270
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>gb|AF419160.1| Aspergillus sojae leucine aminopeptidase (lap1) gene, complete cds
          Length = 2547

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 349  gcttttctgcaagtgctgctcaaag 373
            |||||||||||||| ||||||||||
Sbjct: 1182 gcttttctgcaagtactgctcaaag 1158
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>emb|AJ132353.1|PFL132353 Platichthys flesus CYP1A gene, exons 1-7
          Length = 6660

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 471 aatttccttgtgtctccttaa 491
           |||||||||||||||||||||
Sbjct: 584 aatttccttgtgtctccttaa 564
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>gb|AY093328.1| Arabidopsis thaliana similar to high affinity potassium transporter
            (At1g70300) mRNA, complete cds
          Length = 2389

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 228  ctaagactgaggagccagttg 248
            |||||||||||||||||||||
Sbjct: 1571 ctaagactgaggagccagttg 1551
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>gb|AY062542.1| Arabidopsis thaliana Similar to high affinity potassium transporter
            (At1g70300; F17O7.17) mRNA, complete cds
          Length = 2492

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 228  ctaagactgaggagccagttg 248
            |||||||||||||||||||||
Sbjct: 1663 ctaagactgaggagccagttg 1643
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 600     agaaaaagatccaggtgcttt 620
               |||||||||||||||||||||
Sbjct: 4768275 agaaaaagatccaggtgcttt 4768295
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>emb|BX816687.1|CNS0AELU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH62ZF11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2746

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 228  ctaagactgaggagccagttg 248
            |||||||||||||||||||||
Sbjct: 1835 ctaagactgaggagccagttg 1815
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0084L07
          Length = 127992

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 600   agaaaaagatccaggtgcttt 620
             |||||||||||||||||||||
Sbjct: 86185 agaaaaagatccaggtgcttt 86205
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>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002L09
          Length = 146343

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 600   agaaaaagatccaggtgcttt 620
             |||||||||||||||||||||
Sbjct: 42788 agaaaaagatccaggtgcttt 42808
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>dbj|AK100230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I19, full
           insert sequence
          Length = 2534

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 463 gttgaaggaatttccttgtgt 483
           |||||||||||||||||||||
Sbjct: 641 gttgaaggaatttccttgtgt 661
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>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence
          Length = 92128

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   ctaagactgaggagccagttg 248
             |||||||||||||||||||||
Sbjct: 75845 ctaagactgaggagccagttg 75825
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>gb|BC007202.1| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse), mRNA (cDNA clone IMAGE:2964406)
          Length = 3111

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1974 tcaaagttcagaaagtctta 1955
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>gb|BC001516.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse), transcript variant f, mRNA (cDNA clone
            MGC:2820 IMAGE:2964406), complete cds
          Length = 3112

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1974 tcaaagttcagaaagtctta 1955
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>ref|XM_882064.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 13
            (LOC539573), mRNA
          Length = 2787

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1665 tcaaagttcagaaagtctta 1646
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>ref|XM_882054.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 12
            (LOC539573), mRNA
          Length = 2758

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1665 tcaaagttcagaaagtctta 1646
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>ref|XM_882042.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 11
            (LOC539573), mRNA
          Length = 2710

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1588 tcaaagttcagaaagtctta 1569
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>ref|XM_882031.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 10
            (LOC539573), mRNA
          Length = 2692

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1570 tcaaagttcagaaagtctta 1551
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>ref|XM_868830.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 2
            (LOC539573), mRNA
          Length = 2713

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1591 tcaaagttcagaaagtctta 1572
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>ref|XM_882010.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 9
            (LOC539573), mRNA
          Length = 3000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1878 tcaaagttcagaaagtctta 1859
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>ref|XM_881996.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 8
            (LOC539573), mRNA
          Length = 3096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1974 tcaaagttcagaaagtctta 1955
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>ref|XM_881980.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 7
            (LOC539573), mRNA
          Length = 2804

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1682 tcaaagttcagaaagtctta 1663
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>ref|XM_881967.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 6
            (LOC539573), mRNA
          Length = 3166

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2044 tcaaagttcagaaagtctta 2025
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>ref|XM_881955.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 5
            (LOC539573), mRNA
          Length = 2584

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1462 tcaaagttcagaaagtctta 1443
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>ref|XM_588141.2| PREDICTED: Bos taurus similar to Homeobox protein Meis2
           (Meis1-related protein 1), transcript variant 1
           (LOC539573), mRNA
          Length = 1959

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 tcaaagttcagaaagtctta 387
           ||||||||||||||||||||
Sbjct: 837 tcaaagttcagaaagtctta 818
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>ref|XM_881933.1| PREDICTED: Bos taurus similar to Homeobox protein Meis2
            (Meis1-related protein 1), transcript variant 4
            (LOC539573), mRNA
          Length = 2808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1686 tcaaagttcagaaagtctta 1667
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>gb|BC001844.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse), transcript variant f, mRNA (cDNA clone
            MGC:4493 IMAGE:2964406), complete cds
          Length = 3113

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1974 tcaaagttcagaaagtctta 1955
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>gb|AC132946.3| Mus musculus BAC clone RP24-343E19 from chromosome 3, complete sequence
          Length = 138218

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   ctccttaagttctactgaag 503
             ||||||||||||||||||||
Sbjct: 18086 ctccttaagttctactgaag 18067
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>ref|NM_172316.1| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant h, mRNA
          Length = 3175

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2035 tcaaagttcagaaagtctta 2016
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>ref|NM_172315.1| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant g, mRNA
          Length = 2775

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1686 tcaaagttcagaaagtctta 1667
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>ref|NM_170677.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant a, mRNA
          Length = 3721

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2632 tcaaagttcagaaagtctta 2613
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>ref|NM_170676.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant d, mRNA
          Length = 3604

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2515 tcaaagttcagaaagtctta 2496
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>ref|NM_170675.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant c, mRNA
          Length = 3625

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2536 tcaaagttcagaaagtctta 2517
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>ref|NM_170674.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant b, mRNA
          Length = 3700

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2611 tcaaagttcagaaagtctta 2592
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>ref|NM_020149.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant e, mRNA
          Length = 3623

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2534 tcaaagttcagaaagtctta 2515
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>ref|NM_002399.2| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse) (MEIS2), transcript variant f, mRNA
          Length = 3110

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1970 tcaaagttcagaaagtctta 1951
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>gb|AC107803.15| Mus musculus chromosome 9, clone RP23-47I9, complete sequence
          Length = 198199

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aagactgaggagccagttgc 249
             ||||||||||||||||||||
Sbjct: 46141 aagactgaggagccagttgc 46160
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>gb|BC050431.1| Homo sapiens Meis1, myeloid ecotropic viral integration site 1
            homolog 2 (mouse), mRNA (cDNA clone MGC:54158
            IMAGE:6066728), complete cds
          Length = 2937

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1899 tcaaagttcagaaagtctta 1880
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>gb|AC153643.22| Medicago truncatula clone mth2-109d3, complete sequence
          Length = 114250

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tcaaatacttacttaaagat 199
             ||||||||||||||||||||
Sbjct: 89537 tcaaatacttacttaaagat 89556
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>gb|AC102791.15| Mus musculus chromosome 3, clone RP23-278C9, complete sequence
          Length = 188017

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    ctccttaagttctactgaag 503
              ||||||||||||||||||||
Sbjct: 166284 ctccttaagttctactgaag 166265
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>gb|AC160988.3| Mus musculus BAC clone RP23-236A22 from chromosome 14, complete
             sequence
          Length = 191733

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   tcttctgaagttactagttc 316
             ||||||||||||||||||||
Sbjct: 75462 tcttctgaagttactagttc 75443
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>dbj|AK056620.1| Homo sapiens cDNA FLJ32058 fis, clone NTONG2001657, highly similar to
            HOMEOBOX PROTEIN MEIS2
          Length = 2283

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2023 tcaaagttcagaaagtctta 2004
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>dbj|AK056216.1| Homo sapiens cDNA FLJ31654 fis, clone NT2RI2004230, highly similar to
            Mus musculus mRNA for homeodomain protein Meis2a
          Length = 2926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 2668 tcaaagttcagaaagtctta 2649
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>dbj|AK056038.1| Homo sapiens cDNA FLJ31476 fis, clone NT2NE2001617, highly similar to
            HOMEOBOX PROTEIN MEIS2
          Length = 2537

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1686 tcaaagttcagaaagtctta 1667
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>dbj|AK055936.1| Homo sapiens cDNA FLJ31374 fis, clone NB9N42000430, highly similar to
            HOMEOBOX PROTEIN MEIS2
          Length = 2320

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1469 tcaaagttcagaaagtctta 1450
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>dbj|AK001298.1| Homo sapiens cDNA FLJ10436 fis, clone NT2RP1000574, highly similar
           to HOMEOBOX PROTEIN MEIS2
          Length = 1929

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 tcaaagttcagaaagtctta 387
           ||||||||||||||||||||
Sbjct: 855 tcaaagttcagaaagtctta 836
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>gb|AC018563.7| Homo sapiens, clone RP11-122D10, complete sequence
          Length = 174691

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   tcaaagttcagaaagtctta 387
             ||||||||||||||||||||
Sbjct: 88902 tcaaagttcagaaagtctta 88921
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>gb|AC022334.66| Homo sapiens 12 BAC RP11-365O10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 122025

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    atactgtcttaaaagccatgccat 105
             ||||| ||||||||||||||||||
Sbjct: 27195 atactatcttaaaagccatgccat 27218
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>gb|AC154590.2| Mus musculus BAC clone RP23-368L2 from chromosome 14, complete sequence
          Length = 168428

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tcttctgaagttactagttc 316
             ||||||||||||||||||||
Sbjct: 20903 tcttctgaagttactagttc 20922
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>gb|AY044167.1| Homo sapiens clone IMAGE:BE741130 mRNA sequence
          Length = 2402

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 1  ttcggcacgaggcaacctcgtgct 24
          ||||||||||||||||||| ||||
Sbjct: 40 ttcggcacgaggcaacctcctgct 63
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>gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, complete sequence
          Length = 207362

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tcaaagttcagaaagtctta 387
              ||||||||||||||||||||
Sbjct: 119688 tcaaagttcagaaagtctta 119669
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>gb|AF179899.1|AF179899 Homo sapiens TALE homeobox protein Meis2e mRNA, complete cds
          Length = 2774

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1752 tcaaagttcagaaagtctta 1733
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>gb|AF179898.1|AF179898 Homo sapiens TALE homeobox protein Meis2d mRNA, complete cds
          Length = 2755

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1733 tcaaagttcagaaagtctta 1714
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>gb|AF179897.1|AF179897 Homo sapiens TALE homeobox protein Meis2c mRNA, complete cds
          Length = 2776

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1754 tcaaagttcagaaagtctta 1735
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>gb|AF179896.1|AF179896 Homo sapiens TALE homeobox protein Meis2b mRNA, complete cds
          Length = 2851

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1829 tcaaagttcagaaagtctta 1810
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>gb|AF178948.1|AF178948 Homo sapiens TALE homeobox protein Meis2a mRNA, complete cds
          Length = 2872

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  tcaaagttcagaaagtctta 387
            ||||||||||||||||||||
Sbjct: 1850 tcaaagttcagaaagtctta 1831
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>dbj|AK071558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J06, full
           insert sequence
          Length = 1668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 gactgaggagccagttgcaa 251
           ||||||||||||||||||||
Sbjct: 600 gactgaggagccagttgcaa 581
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>gb|AF017418.1|AF017418 Homo sapiens homeobox protein MEIS2 (MEIS2) mRNA, partial cds
          Length = 1879

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 tcaaagttcagaaagtctta 387
           ||||||||||||||||||||
Sbjct: 765 tcaaagttcagaaagtctta 746
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>dbj|D85764.1| Oryza sativa (japonica cultivar-group) mRNA for cytosolic
           monodehydroascorbate reductase, complete cds
          Length = 1570

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 gactgaggagccagttgcaa 251
           ||||||||||||||||||||
Sbjct: 478 gactgaggagccagttgcaa 459


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,218,498
Number of Sequences: 3902068
Number of extensions: 5218498
Number of successful extensions: 93187
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93022
Number of HSP's gapped (non-prelim): 160
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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