ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63i03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467103.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2909 Score = 109 bits (55), Expect = 1e-20 Identities = 199/247 (80%) Strand = Plus / Plus Query: 348 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 407 |||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| | Sbjct: 426 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 485 Query: 408 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 467 |||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| ||| Sbjct: 486 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 545 Query: 468 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 527 || |||| | |||| |||||||||| |||| ||||||||| | | || ||||||| Sbjct: 546 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 605 Query: 528 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 587 ||||||| | |||||| ||||| |||||||| ||||||| || || ||||||||||||| Sbjct: 606 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 665 Query: 588 atatgtt 594 ||||||| Sbjct: 666 atatgtt 672
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 1e-20 Identities = 199/247 (80%) Strand = Plus / Minus Query: 348 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 407 |||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| | Sbjct: 26420293 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 26420234 Query: 408 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 467 |||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| ||| Sbjct: 26420233 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 26420174 Query: 468 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 527 || |||| | |||| |||||||||| |||| ||||||||| | | || ||||||| Sbjct: 26420173 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 26420114 Query: 528 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 587 ||||||| | |||||| ||||| |||||||| ||||||| || || ||||||||||||| Sbjct: 26420113 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 26420054 Query: 588 atatgtt 594 ||||||| Sbjct: 26420053 atatgtt 26420047
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 109 bits (55), Expect = 1e-20 Identities = 199/247 (80%) Strand = Plus / Minus Query: 348 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 407 |||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| | Sbjct: 20209 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 20150 Query: 408 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 467 |||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| ||| Sbjct: 20149 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 20090 Query: 468 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 527 || |||| | |||| |||||||||| |||| ||||||||| | | || ||||||| Sbjct: 20089 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 20030 Query: 528 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 587 ||||||| | |||||| ||||| |||||||| ||||||| || || ||||||||||||| Sbjct: 20029 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 19970 Query: 588 atatgtt 594 ||||||| Sbjct: 19969 atatgtt 19963
>dbj|AK069133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007I15, full insert sequence Length = 2909 Score = 109 bits (55), Expect = 1e-20 Identities = 199/247 (80%) Strand = Plus / Plus Query: 348 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 407 |||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| | Sbjct: 426 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 485 Query: 408 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 467 |||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| ||| Sbjct: 486 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 545 Query: 468 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 527 || |||| | |||| |||||||||| |||| ||||||||| | | || ||||||| Sbjct: 546 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 605 Query: 528 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 587 ||||||| | |||||| ||||| |||||||| ||||||| || || ||||||||||||| Sbjct: 606 aagcaccacctggtgcacaggacgcaaggaagcggggataccaaccgtctataccattta 665 Query: 588 atatgtt 594 ||||||| Sbjct: 666 atatgtt 672
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 101 bits (51), Expect = 3e-18 Identities = 198/247 (80%) Strand = Plus / Minus Query: 348 accagccagaacaagagcagtcacgttctgagaatcaactgcagcaggcagaaacaaata 407 |||||||||||||||| | ||| |||||| || || ||| | |||||||| |||| | Sbjct: 142344 accagccagaacaagaaccaccacattctgaaaaccatctgaaacaggcagagccaaaca 142285 Query: 408 gcttccagttggcagaaaaaggaacagactatgttgctcaacagagtttgacaggctcca 467 |||||||||| || ||||| | ||||| ||||| || || ||||| ||| |||||| ||| Sbjct: 142284 gcttccagttcgctgaaaaggaaacaggctatgctggtctacagaatttcacaggcccca 142225 Query: 468 tggaagatgctgctcagccttcaggagatcagcggcatgtaaatccagttgttggtcagc 527 || |||| | |||| |||||||||| |||| ||||||||| | | || ||||||| Sbjct: 142224 aggtggatgtgggtcagacttcaggagagcagcagcatgtaaaacagatggtcggtcagc 142165 Query: 528 aagcacctcatggtgcgcaggaaacaaggaagaggggatatcagccatctataccattta 587 ||||||| | |||||| || || |||||||| ||||||| || || ||||||||||||| Sbjct: 142164 aagcaccacctggtgcacaagacgcaaggaagcggggataccaaccgtctataccattta 142105 Query: 588 atatgtt 594 ||||||| Sbjct: 142104 atatgtt 142098
>emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chromosome 11 Contains the 5' end of the Gabra1 gene for gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1, complete sequence Length = 116840 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ctgcagcaggcagaaacaaata 407 |||||||||||||||||||||| Sbjct: 86343 ctgcagcaggcagaaacaaata 86364
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 308 tcagaaaatgagaactttatca 329 |||||||||||||||||||||| Sbjct: 163529 tcagaaaatgagaactttatca 163550
>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete sequence Length = 101598 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 aggcagaaacaaatagcttcc 413 ||||||||||||||||||||| Sbjct: 13853 aggcagaaacaaatagcttcc 13833
>gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9, complete sequence Length = 185444 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 tgacaggctccatggaagatg 476 ||||||||||||||||||||| Sbjct: 156877 tgacaggctccatggaagatg 156897
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 agccagaacaagagcagtcac 371 ||||||||||||||||||||| Sbjct: 55814 agccagaacaagagcagtcac 55834
>dbj|AB201463.1| Takifugu rubripes mRNA for DMRT3 protein, complete cds Length = 1573 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gccgccggaggctgcggggga 126 ||||||||||||||||||||| Sbjct: 1240 gccgccggaggctgcggggga 1220
>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete sequence Length = 307324 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 agccagaacaagagcagtcac 371 ||||||||||||||||||||| Sbjct: 213758 agccagaacaagagcagtcac 213778
>ref|NM_001037945.1| Takifugu rubripes doublesex and mab-3 related transcription factor 3 (dmrt3), mRNA Length = 1573 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gccgccggaggctgcggggga 126 ||||||||||||||||||||| Sbjct: 1240 gccgccggaggctgcggggga 1220
>gb|AC126669.4| Mus musculus BAC clone RP24-457D15 from 9, complete sequence Length = 180081 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 tgacaggctccatggaagatg 476 ||||||||||||||||||||| Sbjct: 77957 tgacaggctccatggaagatg 77977
>ref|NM_138993.2| Homo sapiens mitogen-activated protein kinase 11 (MAPK11), transcript variant 2, mRNA Length = 1503 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 889 ggctccacggaagatgctgctcag 866
>ref|NM_002751.5| Homo sapiens mitogen-activated protein kinase 11 (MAPK11), transcript variant 1, mRNA Length = 2420 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 889 ggctccacggaagatgctgctcag 866
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence Length = 170539 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 ggaaacaaggaagaggggatatca 570 |||||| ||||||||||||||||| Sbjct: 105954 ggaaaccaggaagaggggatatca 105931
>gb|AE006147.1| Pasteurella multocida subsp. multocida str. Pm70 section 114 of 204 of the complete genome Length = 14766 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 aaaaaggaacagactatgtt 442 |||||||||||||||||||| Sbjct: 11990 aaaaaggaacagactatgtt 11971
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 ccggccgccggaggctgcgggggacgct 130 ||||||||||| ||||||||| |||||| Sbjct: 67299 ccggccgccgggggctgcgggcgacgct 67272
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 tgcctcaggatataagtgac 175 |||||||||||||||||||| Sbjct: 28879 tgcctcaggatataagtgac 28860
>gb|AC125274.12| Mus musculus chromosome 15, clone RP24-157F9, complete sequence Length = 188060 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 ggaaacaaggaagaggggatatca 570 |||||| ||||||||||||||||| Sbjct: 23620 ggaaaccaggaagaggggatatca 23597
>gb|AC096776.1| Mus musculus BAC clone RP23-71F1 from X, complete sequence Length = 220119 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 agatcagaaaggaagtgcccagtc 234 |||||||||||||||||| ||||| Sbjct: 74352 agatcagaaaggaagtgcacagtc 74375 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 agatcagaaaggaagtgcccagtc 234 |||||||||||||||||| ||||| Sbjct: 45979 agatcagaaaggaagtgcacagtc 45956
>emb|AL360007.11| Human DNA sequence from clone RP11-753B14 on chromosome 6 Contains a novel gene, the 5' end of a novel gene and a CpG island, complete sequence Length = 90011 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 aaactggagattcagaaaat 316 |||||||||||||||||||| Sbjct: 80458 aaactggagattcagaaaat 80439
>emb|AL158163.11| Human DNA sequence from clone RP11-348N5 on chromosome 10 Contains the 3' end of the PDCD4 gene for programmed cell death 4 (neoplastic transformation inhibitor)(H731, MGC33046, MGC33047), a novel gene (LOC92482), the SHOC2 gene for soc-2 suppressor of clear homolog (C. elegans)(SOC2, SUR8, SOC-2, SUR-8, KIAA0862, SIAA0862), ribosomal protein L13a pseudogene 6 (RPL13AP6), the ADRA2A gene for adrenergic, alpha-2A-, receptor (alpha-2AAR subtype C10)(ADRA2, ADRAR, ZNF32, ADRA2R) and two CpG islands, complete sequence Length = 204908 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 atcagccatctataccattt 586 |||||||||||||||||||| Sbjct: 134222 atcagccatctataccattt 134241
>emb|AL022328.21|HS402G11 Human DNA sequence from clone RP3-402G11 on chromosome 22q13.31-13.33 Contains the MAPK12 gene for mitogen activated protein kinase 12 (SAPK3), the MAPK11 gene for mitogen activated protein kinase 11 (PRKM11), gene KIAA0315, the gene for a novel protein similar to KIAA0901 and mouse histone deacetylase MHDA2, the gene for a novel protein similar to Xenopus gamma-tubulin interacting protein (yeast SPC98 homolog), the gene for a novel protein similar to yeast and bacterial predicted proteins, the gene for a novel protein similar to C. elegans F38A5.2, the gene for a novel protein similar to MRS1 and the gene for a novel protein similar to mouse MOV10 (GB110) and yeast and plant predicted proteins. Contains ESTs, GSSs and fifteen putative CpG islands, complete sequence Length = 177241 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 165747 ggctccacggaagatgctgctcag 165770
>emb|Y14440.1|HSY14440 Homo sapiens mRNA for stress activated protein kinase-2b Length = 1134 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 837 ggctccacggaagatgctgctcag 814
>gb|AC090587.10| Homo sapiens chromosome 11, clone RP11-348A20, complete sequence Length = 165459 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 ataagtgacgtgtccaaatctaca 190 ||||||||| |||||||||||||| Sbjct: 10606 ataagtgacttgtccaaatctaca 10629
>emb|CR624704.1| full-length cDNA clone CS0DJ002YA06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 2347 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 916 ggctccacggaagatgctgctcag 893
>emb|CR615085.1| full-length cDNA clone CS0DM012YJ18 of Fetal liver of Homo sapiens (human) Length = 2405 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 932 ggctccacggaagatgctgctcag 909
>emb|CR605909.1| full-length cDNA clone CS0DF016YL03 of Fetal brain of Homo sapiens (human) Length = 1467 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 278 ggctccacggaagatgctgctcag 255
>emb|CR600695.1| full-length cDNA clone CS0DI051YF12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1661 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 926 ggctccacggaagatgctgctcag 903
>emb|CR592517.1| full-length cDNA clone CS0DC005YC09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1975 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 906 ggctccacggaagatgctgctcag 883
>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence Length = 189308 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 aggaaacaaggaagagggga 565 |||||||||||||||||||| Sbjct: 94262 aggaaacaaggaagagggga 94281
>emb|AL671961.7| Mouse DNA sequence from clone RP23-71F1 on chromosome X, complete sequence Length = 143564 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 agatcagaaaggaagtgcccagtc 234 |||||||||||||||||| ||||| Sbjct: 74352 agatcagaaaggaagtgcacagtc 74375 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 agatcagaaaggaagtgcccagtc 234 |||||||||||||||||| ||||| Sbjct: 45979 agatcagaaaggaagtgcacagtc 45956
>gb|AY335777.1| Synthetic construct Homo sapiens mitogen-activated protein kinase 11 (MAPK11) mRNA, partial cds Length = 1095 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 831 ggctccacggaagatgctgctcag 808
>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence Length = 159520 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 ttccagttggcagaaaaagg 429 |||||||||||||||||||| Sbjct: 55850 ttccagttggcagaaaaagg 55831
>gb|AC060812.15| Homo sapiens chromosome 11, clone RP11-120E20, complete sequence Length = 184106 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 ataagtgacgtgtccaaatctaca 190 ||||||||| |||||||||||||| Sbjct: 76639 ataagtgacttgtccaaatctaca 76616
>gb|AC098931.3| Homo sapiens chromosome 3 clone RP11-353I6, complete sequence Length = 179082 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 tcagaaaatgagaactttat 327 |||||||||||||||||||| Sbjct: 173942 tcagaaaatgagaactttat 173923
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 103 ccggccgccggaggctgcgggggacgct 130 ||||||||||| ||||||||| |||||| Sbjct: 171494 ccggccgccgggggctgcgggcgacgct 171521
>dbj|AK059036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C10, full insert sequence Length = 1554 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 tggtcagctgcaagcagcagatca 216 ||||||| |||||||||||||||| Sbjct: 1180 tggtcagttgcaagcagcagatca 1203
>emb|CR456514.1| Homo sapiens MAPK11 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.MAPK11) Length = 1103 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 833 ggctccacggaagatgctgctcag 810
>gb|AF001174.1|AF001174 Homo sapiens p38beta2 MAP kinase mRNA, complete cds Length = 1310 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 837 ggctccacggaagatgctgctcag 814
>gb|AF001008.1|HSAF001008 Human p38Beta2 MAP Kinase mRNA, complete cds Length = 1095 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 831 ggctccacggaagatgctgctcag 808
>emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, complete sequence Length = 157088 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gaagtgcccagtcaagccag 241 |||||||||||||||||||| Sbjct: 22030 gaagtgcccagtcaagccag 22049
>gb|AF031135.1|AF031135 Homo sapiens p38beta2 MAP kinase mRNA, complete cds Length = 1218 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 846 ggctccacggaagatgctgctcag 823
>gb|BC027933.1| Homo sapiens mitogen-activated protein kinase 11, mRNA (cDNA clone MGC:34566 IMAGE:5199628), complete cds Length = 2480 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 889 ggctccacggaagatgctgctcag 866
>gb|U92268.1|HSU92268 Homo sapiens mitogen activated protein kinase p38-2 mRNA, complete cds Length = 1449 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 835 ggctccacggaagatgctgctcag 812
>gb|U53442.1|HSU53442 Human p38Beta MAP kinase mRNA, complete cds Length = 2180 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 874 ggctccacggaagatgctgctcag 851
>gb|DQ279722.1| Homo sapiens mitogen-activated protein kinase 11 (MAPK11) gene, complete cds Length = 10600 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 461 ggctccatggaagatgctgctcag 484 ||||||| |||||||||||||||| Sbjct: 6722 ggctccacggaagatgctgctcag 6699 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,455,317 Number of Sequences: 3902068 Number of extensions: 5455317 Number of successful extensions: 131513 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131382 Number of HSP's gapped (non-prelim): 121 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
