No.
Definition
Score (bits)
E Value
1 gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
442
e-121
2 gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence
272
1e-69
3 gb|AF161269.1| Oryza sativa (japonica cultivar-group) chromosome...
88
4e-14
4 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
88
4e-14
5 dbj|AK072227.1| Oryza sativa (japonica cultivar-group) cDNA clon...
88
4e-14
6 gb|AF119222.1|AF119222 Oryza sativa BAC clone 1.H19, complete se...
88
4e-14
7 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
88
4e-14
8 gb|AF128457.1|AF128457 Oryza sativa subsp. indica BAC clone 16F1...
82
3e-12
9 gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete...
52
0.002
10 gb|CP000001.1| Bacillus cereus E33L, complete genome
48
0.038
11 ref|XM_482430.1| Oryza sativa (japonica cultivar-group), mRNA
46
0.15
12 emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, co...
46
0.15
13 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.15
14 gb|AF326277.1|AF326277 Hordeum vulgare ent-kaurenoic acid oxidas...
46
0.15
15 gb|AF512031.3| Choristoneura fumiferana MNPV polyhedrin, complet...
46
0.15
16 dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D...
46
0.15
17 ref|NM_112308.1| Arabidopsis thaliana unknown protein AT3G14480 ...
44
0.59
18 ref|NM_103010.1| Arabidopsis thaliana electron transporter AT1G3...
44
0.59
19 gb|BT020381.1| Arabidopsis thaliana At1g32760 mRNA, complete cds
44
0.59
20 gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ...
44
0.59
21 gb|AC151969.3| Mus musculus BAC clone RP24-255B1 from chromosome...
44
0.59
22 ref|XM_814164.1| Trypanosoma cruzi strain CL Brener mucin-associ...
44
0.59
23 ref|XM_544423.2| PREDICTED: Canis familiaris similar to polyhome...
44
0.59
24 gb|AC126010.13| Medicago truncatula clone mth2-20e4, complete se...
44
0.59
25 gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ...
44
0.59
26 dbj|AK079265.1| Mus musculus adult male urinary bladder cDNA, RI...
44
0.59
27 gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana...
44
0.59
28 dbj|AB028617.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...
44
0.59
29 dbj|AK109995.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.59
30 gb|BT021135.1| Arabidopsis thaliana At1g32760 gene, complete cds
44
0.59
31 dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp...
44
0.59
32 gb|L26252.1|LEIFIBRIL Leishmania major fibrillarin homologue, co...
44
0.59
33 gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co...
42
2.3
34 gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete seq...
42
2.3
35 gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ...
42
2.3
36 gb|AC132340.3| Mus musculus BAC clone RP24-166O10 from chromosom...
42
2.3
37 ref|XM_797876.1| Trypanosoma cruzi strain CL Brener dispersed ge...
42
2.3
38 dbj|AK128363.1| Homo sapiens cDNA FLJ46506 fis, clone THYMU3030752
42
2.3
39 ref|NM_057944.3| Drosophila melanogaster miranda CG12249-RB, tra...
42
2.3
40 ref|NM_057943.3| Drosophila melanogaster miranda CG12249-RA, tra...
42
2.3
41 gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple...
42
2.3
42 gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
42
2.3
43 gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
42
2.3
44 gb|AC007816.7|AC007816 Drosophila melanogaster, chromosome 3R, r...
42
2.3
45 gb|AC007711.9|AC007711 Drosophila melanogaster, chromosome 3R, r...
42
2.3
46 gb|AC007365.3| Homo sapiens BAC clone RP11-451M22 from 2, comple...
42
2.3
47 gb|BT004903.1| Drosophila melanogaster LD02989 full insert cDNA
42
2.3
48 gb|AF252741.1|AF252741 Drosophila simulans strain sim5 ovarian t...
42
2.3
49 gb|AF252740.1|AF252740 Drosophila simulans strain sim4 ovarian t...
42
2.3
50 gb|AF252739.1|AF252739 Drosophila simulans strain sim3 ovarian t...
42
2.3
51 gb|AF252738.1|AF252738 Drosophila simulans strain sim2 ovarian t...
42
2.3
52 gb|AF252737.1|AF252737 Drosophila simulans strain sim1 ovarian t...
42
2.3
53 emb|AJ429230.1|VCA429230 Volvox carteri f. nagariensis mRNA for ...
42
2.3
54 gb|AE003728.3| Drosophila melanogaster chromosome 3R, section 66...
42
2.3
55 emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC...
42
2.3
56 gb|AF045771.1|AF045771 Drosophila melanogaster miranda mRNA, com...
42
2.3
57 gb|M63477.1|PSUAFA02 P.americanus antifreeze protein pseudogene,...
42
2.3
58 dbj|AB005661.1| Drosophila melanogaster mRNA for Miranda, comple...
42
2.3
59 gb|AC153812.1| Homo sapiens chromosome 9 clone fa1022, complete ...
40
9.2
60 ref|XM_521048.1| PREDICTED: Pan troglodytes similar to Histone-l...
40
9.2
61 gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
40
9.2
62 ref|NM_195443.1| Oryza sativa (japonica cultivar-group) putative...
40
9.2
63 ref|XM_466448.1| Oryza sativa (japonica cultivar-group), mRNA
40
9.2
64 ref|XM_450056.1| Oryza sativa (japonica cultivar-group), mRNA
40
9.2
65 ref|NM_185890.2| Oryza sativa (japonica cultivar-group), mRNA
40
9.2
66 ref|XM_506513.1| PREDICTED Oryza sativa (japonica cultivar-group...
40
9.2
67 gb|AE017142.1| Yersinia pestis biovar Medievalis str. 91001 sect...
40
9.2
68 gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
40
9.2
69 gb|AY551440.1| Trypanosoma cruzi clone BAC D6C, complete sequence
40
9.2
70 gb|AC115618.3| Homo sapiens chromosome X clone RP11-1148L6 map p...
40
9.2
71 gb|AF196970.2| Homo sapiens chromosome X multiple clones map p11...
40
9.2
72 gb|BC012738.2| Homo sapiens Wiskott-Aldrich syndrome (eczema-thr...
40
9.2
73 ref|XM_881886.1| PREDICTED: Bos taurus hypothetical protein LOC6...
40
9.2
74 gb|AC124717.3| Mus musculus BAC clone RP24-147K15 from chromosom...
40
9.2
75 ref|NM_000377.1| Homo sapiens Wiskott-Aldrich syndrome (eczema-t...
40
9.2
76 gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
40
9.2
77 gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete se...
40
9.2
78 gb|AE009952.1| Yersinia pestis KIM, complete genome
40
9.2
79 gb|AC121604.3| Mus musculus BAC clone RP23-312E2 from chromosome...
40
9.2
80 ref|XM_754159.1| Ustilago maydis 521 hypothetical protein (UM031...
40
9.2
81 ref|XM_533726.2| PREDICTED: Canis familiaris similar to coiled-c...
40
9.2
82 ref|XM_806806.1| Trypanosoma cruzi strain CL Brener dispersed ge...
40
9.2
83 ref|XM_815311.1| Trypanosoma cruzi strain CL Brener dispersed ge...
40
9.2
84 ref|XM_815361.1| Trypanosoma cruzi strain CL Brener dispersed ge...
40
9.2
85 ref|XM_798021.1| Trypanosoma cruzi strain CL Brener dispersed ge...
40
9.2
86 gb|BC002961.1| Homo sapiens Wiskott-Aldrich syndrome (eczema-thr...
40
9.2
87 gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome...
40
9.2
88 gb|AC146866.6| Medicago truncatula clone mth2-19a14, complete se...
40
9.2
89 emb|CR392000.2| Human DNA sequence from clone WI2-1959D15 on chr...
40
9.2
90 gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl...
40
9.2
91 emb|AL121672.30|HSDA109B7 Human DNA sequence from clone RP6-109B...
40
9.2
92 emb|AL031224.1|HS336H9 Human DNA sequence from clone RP3-336H9 o...
40
9.2
93 emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp...
40
9.2
94 gb|AC158904.4| Mus musculus chromosome 19, clone RP23-16C24, com...
40
9.2
95 emb|AL627273.1| Salmonella enterica serovar Typhi (Salmonella ty...
40
9.2
96 emb|AJ414160.1| Yersinia pestis strain CO92 complete genome; seg...
40
9.2
97 gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthe...
40
9.2
98 gb|DQ115921.1| Ajaia ajaja microsatellite Aaju21 sequence
40
9.2
99 gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
40
9.2
100 gb|AF331852.1| Saccharum hybrid cultivar CP72-2086 proline-rich ...
40
9.2
101 gb|AC157489.18| Medicago truncatula clone mth2-70e3, complete se...
40
9.2
102 emb|CR605854.1| full-length cDNA clone CS0DJ014YF16 of T cells (...
40
9.2
103 emb|CR605612.1| full-length cDNA clone CS0DH001YF09 of T cells (...
40
9.2
104 emb|CR591854.1| full-length cDNA clone CS0DH001YF10 of T cells (...
40
9.2
105 tpg|BK001788.2| TPA: TPA_inf: Rattus norvegicus RTN2-B (Rtn2) mR...
40
9.2
106 gb|AE012126.1| Xanthomonas campestris pv. campestris str. ATCC 3...
40
9.2
107 gb|AC099325.4| Oryza sativa chromosome 10 BAC OSJNBb0048O22 geno...
40
9.2
108 gb|AC099040.10| Oryza sativa chromosome 10 BAC OSJNBa0004P12 gen...
40
9.2
109 gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g...
40
9.2
110 gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome...
40
9.2
111 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
112 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
113 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
114 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
115 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
116 gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
40
9.2
117 gb|DQ010149.1| Microtus oeconomus hypoxia-inducible factor 1 alp...
40
9.2
118 ref|NM_201562.2| Rattus norvegicus reticulon 2 (Z-band associate...
40
9.2
119 dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...
40
9.2
120 gb|AF154644.1| Nicotiana tabacum clone PR20 mRNA sequence
40
9.2
121 gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
40
9.2
122 dbj|AP005884.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
123 emb|AJ538370.1|NTA538370 Nicotiana tabacum cDNA-AFLP-fragment BT...
40
9.2
124 dbj|AP006619.1| Nocardia farcinica IFM 10152 plasmid pNF1 DNA, c...
40
9.2
125 dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
126 dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
127 gb|AC122733.11| Mus musculus chromosome 5, clone RP24-506B15, co...
40
9.2
128 dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
129 dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D...
40
9.2
130 dbj|AK120883.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.2
131 gb|AC099698.14| Mus musculus chromosome 5, clone RP23-415O9, com...
40
9.2
132 dbj|AK100730.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.2
133 dbj|AK065185.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.2
134 gb|AF115549.2|HSWASPG2 Homo sapiens Wiskott-Aldrich Syndrome pro...
40
9.2
135 gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi...
40
9.2
136 gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole...
40
9.2
137 gb|AC102548.11| Mus musculus chromosome 19, clone RP23-135H14, c...
40
9.2
138 gb|U19927.1|HSU19927 Human Wiskott-Aldrich syndrome (WAS) mRNA, ...
40
9.2
139 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
40
9.2
140 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
40
9.2
141 emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa...
40
9.2
142 emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb...
40
9.2
143 gb|AC134337.3| Mus musculus BAC clone RP23-252I24 from 8, comple...
40
9.2
144 dbj|AP007295.1| Lotus japonicus genomic DNA, clone:LjT33A04, TM0...
40
9.2
145 dbj|AP006645.1| Lotus japonicus genomic DNA, chromosome 1, clone...
40
9.2
146 emb|AJ271911.1|MMU271911 Mus musculus TSC1 gene for hamartin
40
9.2
147 gb|U12707.1|HSU12707 Human Wiskott-Aldrich syndrome protein (WAS...
40
9.2
148 emb|AL731851.13| Mouse DNA sequence from clone RP23-362N19 on ch...
40
9.2
149 emb|AL671880.15| Mouse DNA sequence from clone RP23-384C22 on ch...
40
9.2
150 dbj|AB032934.1| Vibrio alginolyticus pfsA, orfC, orfD genes for ...
40
9.2
>gb|AF521177.1 | Hordeum vulgare contig 211252, complete sequence
Length = 211664
Score = 442 bits (223), Expect = e-121
Identities = 379/427 (88%), Gaps = 4/427 (0%)
Strand = Plus / Minus
Query: 232 tgtggctcaggctgcggcagcatgatcatggaaggctccacgactggcttcgccaagtca 291
||||||| ||||||||||||||| |||| |||||||||| |||||||||| ||||||||
Sbjct: 133340 tgtggctgtggctgcggcagcatggtcattgaaggctccaagactggcttcaccaagtca 133281
Query: 292 ggtggttgcggttcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaag 351
|| ||||||||||||||||||||||| || || |||||||||||||| ||||| ||||||
Sbjct: 133280 ggcggttgcggttcaggctgtggcggcggttgtggcagcatggtcatggaaggttccaag 133221
Query: 352 agtggcttcaccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggc 411
| || ||||||| || || || |||||||||||||||| ||| |||||||| |||
Sbjct: 133220 atgagccatgccaagtctggaggctgtggttcaggctgtggcgccggctgcggtggcggc 133161
Query: 412 ggttgtgccagcatggtcatggaaggctccaggatgagccatgccaagtctgagggctgc 471
||||||| | ||||||||| |||||| ||||||||||||||||||||||||| |||||||
Sbjct: 133160 ggttgtgacggcatggtcaaggaaggttccaggatgagccatgccaagtctgggggctgc 133101
Query: 472 ggttcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggc 531
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 133100 ggttcaggctgtggcgccggctgcggtggcggcggatgtggcggcatggtcatggaaggc 133041
Query: 532 tccaagatgagccacgcaaagtctgggggctgcggntcaggctgtggccgccggctgccg 591
||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||| |
Sbjct: 133040 tccaagatgagccacgccaagtctgggggctgtggttcaggctgtgg-tgccggctgcgg 132982
Query: 592 tggccngcggttgtggcgggaatggtcatggnaggctccaagatgagccatgcccaagtc 651
||| | |||| |||||| | ||| |||||| |||||||||||||||||||| |||||||
Sbjct: 132981 tgg-cggcggatgtggc-cgcatgatcatggaaggctccaagatgagccatg-ccaagtc 132925
Query: 652 tnggggc 658
| |||||
Sbjct: 132924 tgggggc 132918
Score = 285 bits (144), Expect = 9e-74
Identities = 244/273 (89%), Gaps = 5/273 (1%)
Strand = Plus / Minus
Query: 404 gtggtggcggttgtgccagcatggtcatggaaggctccaggatgagccatgccaagtctg 463
|||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 133261 gtggcggcggttgtggcagcatggtcatggaaggttccaagatgagccatgccaagtctg 133202
Query: 464 agggctgcggttcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtca 523
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 133201 gaggctgtggttcaggctgtggcgccggctgcggtggcggcggttgtgacggcatggtca 133142
Query: 524 tggaaggctccaagatgagccacgcaaagtctgggggctgcggntcaggctgtggccgcc 583
|||||| |||| ||||||||| || ||||||||||||||||| ||||||||||| ||||
Sbjct: 133141 aggaaggttccaggatgagccatgccaagtctgggggctgcggttcaggctgtgg-cgcc 133083
Query: 584 ggctgccgtggccngcggttgtggcgggaatggtcatggnaggctccaagatgagccatg 643
|||||| |||| | |||| |||||| || |||||||||| |||||||||||||||||| |
Sbjct: 133082 ggctgcggtgg-cggcggatgtggc-ggcatggtcatggaaggctccaagatgagccacg 133025
Query: 644 cccaagtctnggggcctgtggntnangctgtgg 676
|||||||| |||| |||||| | | |||||||
Sbjct: 133024 -ccaagtctggggg-ctgtggttcaggctgtgg 132994
Score = 268 bits (135), Expect = 2e-68
Identities = 197/218 (90%)
Strand = Plus / Minus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgcca 421
||||||| || || ||||||||||||||||||| ||| |||||||| ||||| |||| |
Sbjct: 133117 ccaagtctgggggctgcggttcaggctgtggcgccggctgcggtggcggcggatgtggcg 133058
Query: 422 gcatggtcatggaaggctccaggatgagccatgccaagtctgagggctgcggttcaggct 481
||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||
Sbjct: 133057 gcatggtcatggaaggctccaagatgagccacgccaagtctgggggctgtggttcaggct 132998
Query: 482 gtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaagatga 541
|||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||
Sbjct: 132997 gtggtgccggctgcggtggcggcggatgtggccgcatgatcatggaaggctccaagatga 132938
Query: 542 gccacgcaaagtctgggggctgcggntcaggctgtggc 579
|||| || ||||||||||||||||| ||| ||||||||
Sbjct: 132937 gccatgccaagtctgggggctgcggttcatgctgtggc 132900
Score = 266 bits (134), Expect = 9e-68
Identities = 152/158 (96%)
Strand = Plus / Minus
Query: 244 tgcggcagcatgatcatggaaggctccacgactggcttcgccaagtcaggtggttgcggt 303
|||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 133406 tgcggctgcatggtcatggaaggctccaagactggctttgccaagtcaggtggttgcggt 133347
Query: 304 tcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaagagtggcttcacc 363
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 133346 tcaggctgtggctgtggctgcggcagcatggtcattgaaggctccaagactggcttcacc 133287
Query: 364 aagtcaggcggttgcggttcaggctgtggcggcggttg 401
||||||||||||||||||||||||||||||||||||||
Sbjct: 133286 aagtcaggcggttgcggttcaggctgtggcggcggttg 133249
Score = 216 bits (109), Expect = 7e-53
Identities = 142/153 (92%)
Strand = Plus / Minus
Query: 8 gtggtggtggaggttgtggcggcatggccattgaaggttccaagggtggcattgccaagc 67
|||||||||||||||||||| || ||||| ||||||||||||||||||| |||| |||||
Sbjct: 133612 gtggtggtggaggttgtggctgcctggcccttgaaggttccaagggtggtattggcaagc 133553
Query: 68 ctagcggctgcggttcaggttgtggtggcagttgtggcggtatggtggttgaaggctcca 127
|| | || || |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 133552 ctcgtggttgtggttcaggttgtggtggcggttgtggcggtatggtggttgaaggctcca 133493
Query: 128 aaactggccatgccaagtcaggcggatgtggct 160
||||||||||||||||||||||||| |||||||
Sbjct: 133492 aaactggccatgccaagtcaggcggttgtggct 133460
Score = 182 bits (92), Expect = 1e-42
Identities = 185/216 (85%)
Strand = Plus / Minus
Query: 311 gtggcggtggctgcggcagcatggtcattgaaggctccaagagtggcttcaccaagtcag 370
||||||| || || ||| |||||||||| ||||||||||||| || | ||||||| |
Sbjct: 133075 gtggcggcggatgtggcggcatggtcatggaaggctccaagatgagccacgccaagtctg 133016
Query: 371 gcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccagcatggtca 430
| || || |||||||||||||| | ||| |||||||| ||||| |||| | ||||| |||
Sbjct: 133015 ggggctgtggttcaggctgtggtgccggctgcggtggcggcggatgtggccgcatgatca 132956
Query: 431 tggaaggctccaggatgagccatgccaagtctgagggctgcggttcaggctgtggcgccg 490
|||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 132955 tggaaggctccaagatgagccatgccaagtctgggggctgcggttcatgctgtggcgccg 132896
Query: 491 gctgcggtggcggcggttgtggcggcatggtcatgg 526
| ||||||||||| || ||||| |||||| ||||||
Sbjct: 132895 ggtgcggtggcggtggatgtggtggcatgatcatgg 132860
Score = 111 bits (56), Expect = 3e-21
Identities = 86/96 (89%)
Strand = Plus / Minus
Query: 298 tgcggttcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaagagtggc 357
||||| || ||||| |||||||| |||||| |||||||||| ||||||||||||| ||||
Sbjct: 133430 tgcggctctggctgcggcggtggttgcggctgcatggtcatggaaggctccaagactggc 133371
Query: 358 ttcaccaagtcaggcggttgcggttcaggctgtggc 393
|| |||||||||| |||||||||||||||||||||
Sbjct: 133370 tttgccaagtcaggtggttgcggttcaggctgtggc 133335
Score = 75.8 bits (38), Expect = 2e-10
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 212 gcttcaccaagtctagtggttgtggctcaggctgcggc 249
||||||||||||||||||||||||||||||||||||||
Sbjct: 133462 gcttcaccaagtctagtggttgtggctcaggctgcggc 133425
Score = 71.9 bits (36), Expect = 3e-09
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcggtggt 177
||||||||||| |||||| |||||||||||| || || || |||||||||||| ||||
Sbjct: 133388 gaaggctccaagactggctttgccaagtcaggtggttgcggttcaggctgtggctgtggc 133329
Query: 178 tgcgctggcatgctgatcgaacactccaagactagcttcaccaagtctagtggttgtggc 237
|||| ||||| | || ||| |||||||||| ||||||||||||| | ||||| ||
Sbjct: 133328 tgcggcagcatggtcattgaaggctccaagactggcttcaccaagtcaggcggttgcggt 133269
Query: 238 tcaggctg 245
||||||||
Sbjct: 133268 tcaggctg 133261
Score = 63.9 bits (32), Expect = 6e-07
Identities = 116/144 (80%)
Strand = Plus / Minus
Query: 29 gcatggccattgaaggttccaagggtggcattgccaagcctagcggctgcggttcaggtt 88
|||||| ||||||||| |||||| |||| | ||||| | |||| ||||||||||| |
Sbjct: 133321 gcatggtcattgaaggctccaagactggcttcaccaagtcaggcggttgcggttcaggct 133262
Query: 89 gtggtggcagttgtggcggtatggtggttgaaggctccaaaactggccatgccaagtcag 148
|||| ||| |||||||| | ||||| | ||||| ||||| | ||||||||||||| |
Sbjct: 133261 gtggcggcggttgtggcagcatggtcatggaaggttccaagatgagccatgccaagtctg 133202
Query: 149 gcggatgtggctcaggctgtggcg 172
| || ||||| |||||||||||||
Sbjct: 133201 gaggctgtggttcaggctgtggcg 133178
Score = 58.0 bits (29), Expect = 4e-05
Identities = 128/161 (79%)
Strand = Plus / Minus
Query: 19 ggttgtggcggcatggccattgaaggttccaagggtggcattgccaagcctagcggctgc 78
||||| ||| |||||| ||| ||||| |||||| |||| |||||||| | | || |||
Sbjct: 133409 ggttgcggctgcatggtcatggaaggctccaagactggctttgccaagtcaggtggttgc 133350
Query: 79 ggttcaggttgtggtggcagttgtggcggtatggtggttgaaggctccaaaactggccat 138
|||||||| ||||| | | || ||| | ||||| ||||||||||||| ||||||
Sbjct: 133349 ggttcaggctgtggctgtggctgcggcagcatggtcattgaaggctccaagactggcttc 133290
Query: 139 gccaagtcaggcggatgtggctcaggctgtggcggtggttg 179
||||||||||||| || || |||||||||||||| |||||
Sbjct: 133289 accaagtcaggcggttgcggttcaggctgtggcggcggttg 133249
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 499 ggcggcggttgtggcggcatggtcatggaaggctccaaga 538
||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 133415 ggcggtggttgcggctgcatggtcatggaaggctccaaga 133376
Score = 50.1 bits (25), Expect = 0.010
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 422 gcatggtcatggaaggctccaggatgagccatgccaagtctgagggctgcggttcaggct 481
||||||||||||||||||||| || || ||||||||| | || |||||||||||||
Sbjct: 133399 gcatggtcatggaaggctccaagactggctttgccaagtcaggtggttgcggttcaggct 133340
Query: 482 gtggc 486
|||||
Sbjct: 133339 gtggc 133335
Score = 42.1 bits (21), Expect = 2.3
Identities = 69/85 (81%)
Strand = Plus / Minus
Query: 293 gtggttgcggttcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaaga 352
||||||| |||||||| ||||| || || || ||| | ||||| ||||||||||||| |
Sbjct: 133549 gtggttgtggttcaggttgtggtggcggttgtggcggtatggtggttgaaggctccaaaa 133490
Query: 353 gtggcttcaccaagtcaggcggttg 377
|||| ||||||||||||||||
Sbjct: 133489 ctggccatgccaagtcaggcggttg 133465
Score = 42.1 bits (21), Expect = 2.3
Identities = 72/89 (80%)
Strand = Plus / Minus
Query: 157 ggctcaggctgtggcggtggttgcgctggcatgctgatcgaacactccaagactagcttc 216
||||| ||||| ||||||||||||| ||||| | || ||| |||||||||| ||||
Sbjct: 133427 ggctctggctgcggcggtggttgcggctgcatggtcatggaaggctccaagactggcttt 133368
Query: 217 accaagtctagtggttgtggctcaggctg 245
||||||| ||||||| || ||||||||
Sbjct: 133367 gccaagtcaggtggttgcggttcaggctg 133339
Score = 42.1 bits (21), Expect = 2.3
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 19 ggttgtggcggcatggccattgaaggttccaag 51
||||||||| |||||| ||| ||||||||||||
Sbjct: 133253 ggttgtggcagcatggtcatggaaggttccaag 133221
Score = 40.1 bits (20), Expect = 9.2
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 497 gtggcggcggttgtggcggcatggtcatggaaggctccaa 536
|||| |||||||||||||| ||||| | |||||||||||
Sbjct: 133531 gtggtggcggttgtggcggtatggtggttgaaggctccaa 133492
>gb|AY642926.1 | Hordeum vulgare BAC CC24_14, complete sequence
Length = 184425
Score = 272 bits (137), Expect = 1e-69
Identities = 149/153 (97%)
Strand = Plus / Minus
Query: 8 gtggtggtggaggttgtggcggcatggccattgaaggttccaagggtggcattgccaagc 67
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 75663 gtggtggtggaggttgtggcggcatggccattgaaggttccaaggctggcattgccaagt 75604
Query: 68 ctagcggctgcggttcaggttgtggtggcagttgtggcggtatggtggttgaaggctcca 127
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75603 ctagcggctgcggttcacgttgtggtggcagttgtggcggtatggtggttgaaggctcca 75544
Query: 128 aaactggccatgccaagtcaggcggatgtggct 160
||||||||||||||||||||||||| |||||||
Sbjct: 75543 aaactggccatgccaagtcaggcggttgtggct 75511
Score = 250 bits (126), Expect = 5e-63
Identities = 150/158 (94%)
Strand = Plus / Minus
Query: 244 tgcggcagcatgatcatggaaggctccacgactggcttcgccaagtcaggtggttgcggt 303
|||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 75457 tgcggcagcatggtcatggaaggctccaagactggctttgccaagtcaggtggttgcggt 75398
Query: 304 tcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaagagtggcttcacc 363
||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 75397 tcaagctgtggcggtggctgcggcagcatggtcattgaaggctccaaggctggtttcacc 75338
Query: 364 aagtcaggcggttgcggttcaggctgtggcggcggttg 401
|||||||||||||||||||||||||||||||| |||||
Sbjct: 75337 aagtcaggcggttgcggttcaggctgtggcggtggttg 75300
Score = 222 bits (112), Expect = 1e-54
Identities = 142/152 (93%)
Strand = Plus / Minus
Query: 412 ggttgtgccagcatggtcatggaaggctccaggatgagccatgccaagtctgagggctgc 471
||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 75304 ggttgtggcagcatggtcatggaaggttccaggatgagccatgccaagtctgggggctgt 75245
Query: 472 ggttcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggc 531
|||||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||
Sbjct: 75244 ggttcaggctgtggtgccggctgcggtggcggcggatgtggcagcatgatcatggaaggc 75185
Query: 532 tccaagatgagccacgcaaagtctgggggctg 563
|||||||||||||| || ||||||||||||||
Sbjct: 75184 tccaagatgagccatgccaagtctgggggctg 75153
Score = 202 bits (102), Expect = 1e-48
Identities = 198/230 (86%)
Strand = Plus / Minus
Query: 241 ggctgcggcagcatgatcatggaaggctccacgactggcttcgccaagtcaggtggttgc 300
||||||||||||||| |||| |||||||||| | |||| ||| |||||||||| ||||||
Sbjct: 75382 ggctgcggcagcatggtcattgaaggctccaaggctggtttcaccaagtcaggcggttgc 75323
Query: 301 ggttcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaagagtggcttc 360
|||||||||||||||||||| || |||||||||||||| ||||| |||| || ||
Sbjct: 75322 ggttcaggctgtggcggtggttgtggcagcatggtcatggaaggttccaggatgagccat 75263
Query: 361 accaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgcc 420
||||||| || || || |||||||||||||| | ||| |||||||| ||||| |||| |
Sbjct: 75262 gccaagtctgggggctgtggttcaggctgtggtgccggctgcggtggcggcggatgtggc 75203
Query: 421 agcatggtcatggaaggctccaggatgagccatgccaagtctgagggctg 470
|||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 75202 agcatgatcatggaaggctccaagatgagccatgccaagtctgggggctg 75153
Score = 131 bits (66), Expect = 3e-27
Identities = 141/162 (87%), Gaps = 4/162 (2%)
Strand = Plus / Minus
Query: 497 gtggcggcggttgtggcggcatggtcatggaaggctccaagatgagccacgcaaagtctg 556
||||||| ||||||||| |||||||||||||||| |||| ||||||||| || |||||||
Sbjct: 75312 gtggcggtggttgtggcagcatggtcatggaaggttccaggatgagccatgccaagtctg 75253
Query: 557 ggggctgcggntcaggctgtggccgccggctgccgtggccngcggttgtggcgggaatgg 616
||||||| || ||||||||||| ||||||||| |||| | |||| |||||| | |||
Sbjct: 75252 ggggctgtggttcaggctgtgg-tgccggctgcggtgg-cggcggatgtggc-agcatga 75196
Query: 617 tcatggnaggctccaagatgagccatgcccaagtctnggggc 658
|||||| |||||||||||||||||||| |||||||| |||||
Sbjct: 75195 tcatggaaggctccaagatgagccatg-ccaagtctgggggc 75155
Score = 117 bits (59), Expect = 5e-23
Identities = 95/107 (88%)
Strand = Plus / Minus
Query: 298 tgcggttcaggctgtggcggtggctgcggcagcatggtcattgaaggctccaagagtggc 357
||||| || ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct: 75481 tgcggctctggctgcggcggtggttgcggcagcatggtcatggaaggctccaagactggc 75422
Query: 358 ttcaccaagtcaggcggttgcggttcaggctgtggcggcggttgcgg 404
|| |||||||||| |||||||||||| |||||||||| || |||||
Sbjct: 75421 tttgccaagtcaggtggttgcggttcaagctgtggcggtggctgcgg 75375
Score = 75.8 bits (38), Expect = 2e-10
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 212 gcttcaccaagtctagtggttgtggctcaggctgcggc 249
||||||||||||||||||||||||||||||||||||||
Sbjct: 75513 gcttcaccaagtctagtggttgtggctcaggctgcggc 75476
Score = 58.0 bits (29), Expect = 4e-05
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 478 ggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatgg 526
|||||||||||||| ||||||||||| || ||||| |||||| ||||||
Sbjct: 75157 ggctgtggcgccgggtgcggtggcggtggatgtggtggcatgatcatgg 75109
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 499 ggcggcggttgtggcggcatggtcatggaaggctccaaga 538
||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 75466 ggcggtggttgcggcagcatggtcatggaaggctccaaga 75427
Score = 56.0 bits (28), Expect = 2e-04
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcggtggt 177
||||||||||| |||||| |||||||||||| || || || ||| |||||||||||||
Sbjct: 75439 gaaggctccaagactggctttgccaagtcaggtggttgcggttcaagctgtggcggtggc 75380
Query: 178 tgcg 181
||||
Sbjct: 75379 tgcg 75376
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 140 ccaagtcaggcggatgtggctcaggctgtggcggtggttg 179
||||||||||||| || || ||||||||||||||||||||
Sbjct: 75339 ccaagtcaggcggttgcggttcaggctgtggcggtggttg 75300
Score = 54.0 bits (27), Expect = 6e-04
Identities = 116/145 (80%), Gaps = 3/145 (2%)
Strand = Plus / Minus
Query: 353 gtggcttcaccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcg 412
|||||||||||||||| | ||||| || |||||||| ||| || ||||| |||||
Sbjct: 75516 gtggcttcaccaagtctagtggttgtggctcaggctgcggctctggctgcggcggtgg-- 75459
Query: 413 gttgtgccagcatggtcatggaaggctccaggatgagccatgccaagtctgagggctgcg 472
||| | ||||||||||||||||||||||| || || ||||||||| | || ||||
Sbjct: 75458 -ttgcggcagcatggtcatggaaggctccaagactggctttgccaagtcaggtggttgcg 75400
Query: 473 gttcaggctgtggcgccggctgcgg 497
||||| ||||||||| ||||||||
Sbjct: 75399 gttcaagctgtggcggtggctgcgg 75375
Score = 44.1 bits (22), Expect = 0.59
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 496 ggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
||||| || |||||||||||||||| ||| ||||| ||||||
Sbjct: 75661 ggtggtggaggttgtggcggcatggccattgaaggttccaag 75620
Score = 44.1 bits (22), Expect = 0.59
Identities = 112/142 (78%)
Strand = Plus / Minus
Query: 29 gcatggccattgaaggttccaagggtggcattgccaagcctagcggctgcggttcaggtt 88
|||||| ||||||||| ||||||| ||| | ||||| | |||| ||||||||||| |
Sbjct: 75372 gcatggtcattgaaggctccaaggctggtttcaccaagtcaggcggttgcggttcaggct 75313
Query: 89 gtggtggcagttgtggcggtatggtggttgaaggctccaaaactggccatgccaagtcag 148
|||| || |||||||| | ||||| | ||||| |||| | ||||||||||||| |
Sbjct: 75312 gtggcggtggttgtggcagcatggtcatggaaggttccaggatgagccatgccaagtctg 75253
Query: 149 gcggatgtggctcaggctgtgg 170
| || ||||| |||||||||||
Sbjct: 75252 ggggctgtggttcaggctgtgg 75231
Score = 42.1 bits (21), Expect = 2.3
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 497 gtggcggcggttgtggcggcatggtcatggaaggctccaag 537
||||||| || || ||| |||||||||| ||||||||||||
Sbjct: 75390 gtggcggtggctgcggcagcatggtcattgaaggctccaag 75350
>gb|AF161269.1 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0034K24, complete sequence
Length = 142852
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 451 catgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcggcggttgt 510
||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 21781 catgccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttgc 21840
Query: 511 ggcg 514
||||
Sbjct: 21841 ggcg 21844
Score = 79.8 bits (40), Expect = 1e-11
Identities = 144/176 (81%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 363 caagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccag 422
|||||| ||||| ||||| |||||||| |||||||| || ||||| ||| | ||| | |
Sbjct: 21531 caagtccggcgggtgcggctcaggctgcggcggcggctgtggtggaggctgcggtggcgg 21590
Query: 423 catggtcatggaaggctcca-ggatgagccatgccaagtctgagggctgcggttcaggct 481
| ||| ||||||| |||||| || || |||||| |||||| | || ||||| |||||||
Sbjct: 21591 cgtggccatggaaagctccaaggctg-gccatgtcaagtccggcggatgcggctcaggct 21649
Query: 482 gtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
| |||| |||||| |||||||| || | |||||||||||||||||| ||||||||
Sbjct: 21650 gcggcggcggctgtggtggcggttgtggcggcggcatggtcatggaaagctccaag 21705
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttg 416
||||||| || || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 21785 ccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttg 21839
Score = 63.9 bits (32), Expect = 6e-07
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 283 gccaagtcaggtggttgcggttcaggctgtggcggtggctgcgg 326
|||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 21784 gccaagtccggtggctgcggttcaggctgtggcggcggctgcgg 21827
Score = 58.0 bits (29), Expect = 4e-05
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 422 gcatggtcatggaaggctcc-aggatgagccatgccaagtctgagggctgcggttcaggc 480
||||||||||||||| |||| ||| || |||||| |||||| | || ||||| ||||||
Sbjct: 21497 gcatggtcatggaagcctccaaggctg-gccatgtcaagtccggcgggtgcggctcaggc 21555
Query: 481 tgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
|| |||| |||||| ||||| ||| | |||||||| ||| ||||||| ||||||||
Sbjct: 21556 tgcggcggcggctgtggtggaggctgcggtggcggcgtggccatggaaagctccaag 21612
Score = 56.0 bits (28), Expect = 2e-04
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 122 gctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
||||||| ||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct: 21605 gctccaaggctggccatgtcaagtccggcggatgcggctcaggctgcggcgg 21656
Score = 54.0 bits (27), Expect = 6e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 475 tcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctcc 534
|||||||| |||| |||||| || |||||| || | || |||||||||||||||| ||||
Sbjct: 21457 tcaggctgcggcggcggctgtggcggcggctgtggcggtggcatggtcatggaagcctcc 21516
Query: 535 aag 537
|||
Sbjct: 21517 aag 21519
Score = 48.1 bits (24), Expect = 0.038
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
|||| |||||| ||||||||| |||||| ||||| || ||||||||||| |||||
Sbjct: 21508 gaagcctccaaggctggccatgtcaagtccggcgggtgcggctcaggctgcggcgg 21563
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 ggttgtggctcaggctgcggc 249
|||||||||||||||||||||
Sbjct: 21448 ggttgtggctcaggctgcggc 21468
Score = 40.1 bits (20), Expect = 9.2
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 133 ggccatgccaagtcaggcggatgtggctcaggctgtggcggtgg 176
||||||| |||||| || ||||||||||| ||||| || |||||
Sbjct: 21334 ggccatggcaagtccggtggatgtggctcgggctgcggtggtgg 21377
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 451 catgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcggcggttgt 510
||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 23365194 catgccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttgc 23365135
Query: 511 ggcg 514
||||
Sbjct: 23365134 ggcg 23365131
Score = 79.8 bits (40), Expect = 1e-11
Identities = 144/176 (81%), Gaps = 2/176 (1%)
Strand = Plus / Minus
Query: 363 caagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccag 422
|||||| ||||| ||||| |||||||| |||||||| || ||||| ||| | ||| | |
Sbjct: 23365444 caagtccggcgggtgcggctcaggctgcggcggcggctgtggtggaggctgcggtggcgg 23365385
Query: 423 catggtcatggaaggctcca-ggatgagccatgccaagtctgagggctgcggttcaggct 481
| ||| ||||||| |||||| || || |||||| |||||| | || ||||| |||||||
Sbjct: 23365384 cgtggccatggaaagctccaaggctg-gccatgtcaagtccggcggatgcggctcaggct 23365326
Query: 482 gtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
| |||| |||||| |||||||| || | |||||||||||||||||| ||||||||
Sbjct: 23365325 gcggcggcggctgtggtggcggttgtggcggcggcatggtcatggaaagctccaag 23365270
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttg 416
||||||| || || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 23365190 ccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttg 23365136
Score = 63.9 bits (32), Expect = 6e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 283 gccaagtcaggtggttgcggttcaggctgtggcggtggctgcgg 326
|||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 23365191 gccaagtccggtggctgcggttcaggctgtggcggcggctgcgg 23365148
Score = 58.0 bits (29), Expect = 4e-05
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 422 gcatggtcatggaaggctcc-aggatgagccatgccaagtctgagggctgcggttcaggc 480
||||||||||||||| |||| ||| || |||||| |||||| | || ||||| ||||||
Sbjct: 23365478 gcatggtcatggaagcctccaaggctg-gccatgtcaagtccggcgggtgcggctcaggc 23365420
Query: 481 tgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
|| |||| |||||| ||||| ||| | |||||||| ||| ||||||| ||||||||
Sbjct: 23365419 tgcggcggcggctgtggtggaggctgcggtggcggcgtggccatggaaagctccaag 23365363
Score = 56.0 bits (28), Expect = 2e-04
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 122 gctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
||||||| ||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct: 23365370 gctccaaggctggccatgtcaagtccggcggatgcggctcaggctgcggcgg 23365319
Score = 54.0 bits (27), Expect = 6e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 475 tcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctcc 534
|||||||| |||| |||||| || |||||| || | || |||||||||||||||| ||||
Sbjct: 23365518 tcaggctgcggcggcggctgtggcggcggctgtggcggtggcatggtcatggaagcctcc 23365459
Query: 535 aag 537
|||
Sbjct: 23365458 aag 23365456
Score = 48.1 bits (24), Expect = 0.038
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
|||| |||||| ||||||||| |||||| ||||| || ||||||||||| |||||
Sbjct: 23365467 gaagcctccaaggctggccatgtcaagtccggcgggtgcggctcaggctgcggcgg 23365412
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 ggttgtggctcaggctgcggc 249
|||||||||||||||||||||
Sbjct: 23365527 ggttgtggctcaggctgcggc 23365507
Score = 40.1 bits (20), Expect = 9.2
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 133 ggccatgccaagtcaggcggatgtggctcaggctgtggcggtgg 176
||||||| |||||| || ||||||||||| ||||| || |||||
Sbjct: 23365641 ggccatggcaagtccggtggatgtggctcgggctgcggtggtgg 23365598
>dbj|AK072227.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013168G19, full
insert sequence
Length = 2470
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 451 catgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcggcggttgt 510
||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2132 catgccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttgc 2191
Query: 511 ggcg 514
||||
Sbjct: 2192 ggcg 2195
Score = 79.8 bits (40), Expect = 1e-11
Identities = 144/176 (81%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 363 caagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccag 422
|||||| ||||| ||||| |||||||| |||||||| || ||||| ||| | ||| | |
Sbjct: 1882 caagtccggcgggtgcggctcaggctgcggcggcggctgtggtggaggctgcggtggcgg 1941
Query: 423 catggtcatggaaggctcca-ggatgagccatgccaagtctgagggctgcggttcaggct 481
| ||| ||||||| |||||| || || |||||| |||||| | || ||||| |||||||
Sbjct: 1942 cgtggccatggaaagctccaaggctg-gccatgtcaagtccggcggatgcggctcaggct 2000
Query: 482 gtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
| |||| |||||| |||||||| || | |||||||||||||||||| ||||||||
Sbjct: 2001 gcggcggcggctgtggtggcggttgtggcggcggcatggtcatggaaagctccaag 2056
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttg 416
||||||| || || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 2136 ccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttg 2190
Score = 63.9 bits (32), Expect = 6e-07
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 283 gccaagtcaggtggttgcggttcaggctgtggcggtggctgcgg 326
|||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 2135 gccaagtccggtggctgcggttcaggctgtggcggcggctgcgg 2178
Score = 58.0 bits (29), Expect = 4e-05
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 422 gcatggtcatggaaggctcc-aggatgagccatgccaagtctgagggctgcggttcaggc 480
||||||||||||||| |||| ||| || |||||| |||||| | || ||||| ||||||
Sbjct: 1848 gcatggtcatggaagcctccaaggctg-gccatgtcaagtccggcgggtgcggctcaggc 1906
Query: 481 tgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
|| |||| |||||| ||||| ||| | |||||||| ||| ||||||| ||||||||
Sbjct: 1907 tgcggcggcggctgtggtggaggctgcggtggcggcgtggccatggaaagctccaag 1963
Score = 56.0 bits (28), Expect = 2e-04
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 122 gctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
||||||| ||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct: 1956 gctccaaggctggccatgtcaagtccggcggatgcggctcaggctgcggcgg 2007
Score = 54.0 bits (27), Expect = 6e-04
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 475 tcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctcc 534
|||||||| |||| |||||| || |||||| || | || |||||||||||||||| ||||
Sbjct: 1808 tcaggctgcggcggcggctgtggcggcggctgtggcggtggcatggtcatggaagcctcc 1867
Query: 535 aag 537
|||
Sbjct: 1868 aag 1870
Score = 48.1 bits (24), Expect = 0.038
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
|||| |||||| ||||||||| |||||| ||||| || ||||||||||| |||||
Sbjct: 1859 gaagcctccaaggctggccatgtcaagtccggcgggtgcggctcaggctgcggcgg 1914
>gb|AF119222.1 |AF119222 Oryza sativa BAC clone 1.H19, complete sequence
Length = 77605
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 451 catgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcggcggttgt 510
||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 14176 catgccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttgc 14235
Query: 511 ggcg 514
||||
Sbjct: 14236 ggcg 14239
Score = 79.8 bits (40), Expect = 1e-11
Identities = 144/176 (81%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 363 caagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccag 422
|||||| ||||| ||||| |||||||| |||||||| || ||||| ||| | ||| | |
Sbjct: 13914 caagtccggcgggtgcggctcaggctgcggcggcggctgtggtggaggctgcggtggcgg 13973
Query: 423 catggtcatggaaggctcca-ggatgagccatgccaagtctgagggctgcggttcaggct 481
| ||| ||||||| |||||| || || |||||| |||||| | || ||||| |||||||
Sbjct: 13974 cgtggccatggaaagctccaaggctg-gccatgtcaagtccggcggatgcggctcaggct 14032
Query: 482 gtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
| |||| |||||| |||||||| || | |||||||||||||||||| ||||||||
Sbjct: 14033 gcggcggcggctgtggtggcggttgtggcggcggcatggtcatggaaagctccaag 14088
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttg 416
||||||| || || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 14180 ccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttg 14234
Score = 63.9 bits (32), Expect = 6e-07
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 283 gccaagtcaggtggttgcggttcaggctgtggcggtggctgcgg 326
|||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 14179 gccaagtccggtggctgcggttcaggctgtggcggcggctgcgg 14222
Score = 58.0 bits (29), Expect = 4e-05
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 422 gcatggtcatggaaggctcc-aggatgagccatgccaagtctgagggctgcggttcaggc 480
||||||||||||||| |||| ||| || |||||| |||||| | || ||||| ||||||
Sbjct: 13880 gcatggtcatggaagcctccaaggctg-gccatgtcaagtccggcgggtgcggctcaggc 13938
Query: 481 tgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
|| |||| |||||| ||||| ||| | |||||||| ||| ||||||| ||||||||
Sbjct: 13939 tgcggcggcggctgtggtggaggctgcggtggcggcgtggccatggaaagctccaag 13995
Score = 56.0 bits (28), Expect = 2e-04
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 122 gctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
||||||| ||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct: 13988 gctccaaggctggccatgtcaagtccggcggatgcggctcaggctgcggcgg 14039
Score = 56.0 bits (28), Expect = 2e-04
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 466 ggctgcggttcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatg 525
||||| || |||||||| |||| |||||| || |||||| || | || ||||||||||||
Sbjct: 13831 ggctgtggctcaggctgcggcggcggctgtggcggcggctgtggcggtggcatggtcatg 13890
Query: 526 gaaggctccaag 537
|||| |||||||
Sbjct: 13891 gaagcctccaag 13902
Score = 48.1 bits (24), Expect = 0.038
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
|||| |||||| ||||||||| |||||| ||||| || ||||||||||| |||||
Sbjct: 13891 gaagcctccaaggctggccatgtcaagtccggcgggtgcggctcaggctgcggcgg 13946
Score = 40.1 bits (20), Expect = 9.2
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 133 ggccatgccaagtcaggcggatgtggctcaggctgtggcggtgg 176
||||||| |||||| || ||||||||||| ||||| || |||||
Sbjct: 13717 ggccatggcaagtccggtggatgtggctcgggctgcggtggtgg 13760
>gb|DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 87.7 bits (44), Expect = 4e-14
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 451 catgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcggcggttgt 510
||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 23675104 catgccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttgc 23675045
Query: 511 ggcg 514
||||
Sbjct: 23675044 ggcg 23675041
Score = 79.8 bits (40), Expect = 1e-11
Identities = 144/176 (81%), Gaps = 2/176 (1%)
Strand = Plus / Minus
Query: 363 caagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccag 422
|||||| ||||| ||||| |||||||| |||||||| || ||||| ||| | ||| | |
Sbjct: 23675354 caagtccggcgggtgcggctcaggctgcggcggcggctgtggtggaggctgcggtggcgg 23675295
Query: 423 catggtcatggaaggctcca-ggatgagccatgccaagtctgagggctgcggttcaggct 481
| ||| ||||||| |||||| || || |||||| |||||| | || ||||| |||||||
Sbjct: 23675294 cgtggccatggaaagctccaaggctg-gccatgtcaagtccggcggatgcggctcaggct 23675236
Query: 482 gtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
| |||| |||||| |||||||| || | |||||||||||||||||| ||||||||
Sbjct: 23675235 gcggcggcggctgtggtggcggttgtggcggcggcatggtcatggaaagctccaag 23675180
Score = 69.9 bits (35), Expect = 1e-08
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttg 416
||||||| || || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 23675100 ccaagtccggtggctgcggttcaggctgtggcggcggctgcggtggcggcggttg 23675046
Score = 63.9 bits (32), Expect = 6e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 283 gccaagtcaggtggttgcggttcaggctgtggcggtggctgcgg 326
|||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 23675101 gccaagtccggtggctgcggttcaggctgtggcggcggctgcgg 23675058
Score = 58.0 bits (29), Expect = 4e-05
Identities = 97/117 (82%), Gaps = 2/117 (1%)
Strand = Plus / Minus
Query: 422 gcatggtcatggaaggctcc-aggatgagccatgccaagtctgagggctgcggttcaggc 480
||||||||||||||| |||| ||| || |||||| |||||| | || ||||| ||||||
Sbjct: 23675388 gcatggtcatggaagcctccaaggctg-gccatgtcaagtccggcgggtgcggctcaggc 23675330
Query: 481 tgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctccaag 537
|| |||| |||||| ||||| ||| | |||||||| ||| ||||||| ||||||||
Sbjct: 23675329 tgcggcggcggctgtggtggaggctgcggtggcggcgtggccatggaaagctccaag 23675273
Score = 56.0 bits (28), Expect = 2e-04
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 122 gctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
||||||| ||||||||| |||||| |||||||| ||||||||||| |||||
Sbjct: 23675280 gctccaaggctggccatgtcaagtccggcggatgcggctcaggctgcggcgg 23675229
Score = 54.0 bits (27), Expect = 6e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 475 tcaggctgtggcgccggctgcggtggcggcggttgtggcggcatggtcatggaaggctcc 534
|||||||| |||| |||||| || |||||| || | || |||||||||||||||| ||||
Sbjct: 23675428 tcaggctgcggcggcggctgtggcggcggctgtggcggtggcatggtcatggaagcctcc 23675369
Query: 535 aag 537
|||
Sbjct: 23675368 aag 23675366
Score = 48.1 bits (24), Expect = 0.038
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 118 gaaggctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
|||| |||||| ||||||||| |||||| ||||| || ||||||||||| |||||
Sbjct: 23675377 gaagcctccaaggctggccatgtcaagtccggcgggtgcggctcaggctgcggcgg 23675322
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 ggttgtggctcaggctgcggc 249
|||||||||||||||||||||
Sbjct: 23675437 ggttgtggctcaggctgcggc 23675417
Score = 40.1 bits (20), Expect = 9.2
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 133 ggccatgccaagtcaggcggatgtggctcaggctgtggcggtgg 176
||||||| |||||| || ||||||||||| ||||| || |||||
Sbjct: 23675551 ggccatggcaagtccggtggatgtggctcgggctgcggtggtgg 23675508
>gb|AF128457.1 |AF128457 Oryza sativa subsp. indica BAC clone 16F19 php20725 region, complete
sequence
Length = 70311
Score = 81.8 bits (41), Expect = 3e-12
Identities = 159/196 (81%), Gaps = 2/196 (1%)
Strand = Plus / Plus
Query: 385 ggctgtggcggcggttgcggtggtggcggttgtgccagcatggtcatggaaggctcca-g 443
||||| ||||||||||||||||| ||| || | | | |||||||||||||| |||||| |
Sbjct: 7371 ggctgcggcggcggttgcggtggcggctgtggcggcggcatggtcatggaaagctccaag 7430
Query: 444 gatgagccatgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcgg 503
| || |||||| |||||| | |||||||| |||||||| |||| |||||||||||| ||
Sbjct: 7431 gctg-gccatgtcaagtccggcggctgcggctcaggctgcggcggcggctgcggtggagg 7489
Query: 504 cggttgtggcggcatggtcatggaaggctccaagatgagccacgcaaagtctgggggctg 563
| | |||||||| ||| |||||| |||||| | | || || ||||| || |||||
Sbjct: 7490 ctgcggtggcggcgtggccatggagagctccaccgttggacatgccaagtccggtggctg 7549
Query: 564 cggntcaggctgtggc 579
||| ||||||||||||
Sbjct: 7550 cggttcaggctgtggc 7565
Score = 71.9 bits (36), Expect = 3e-09
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 283 gccaagtcaggtggttgcggttcaggctgtggcggtggctgcggcagcatgg 334
|||||||| ||||| |||||||||||||||||||| ||||||||| ||||||
Sbjct: 7533 gccaagtccggtggctgcggttcaggctgtggcggcggctgcggcggcatgg 7584
Score = 71.9 bits (36), Expect = 3e-09
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 450 ccatgccaagtctgagggctgcggttcaggctgtggcgccggctgcggtggcggcggttg 509
|||||| ||||||| ||||| || || ||||| |||| ||| |||||||||||| || |
Sbjct: 7343 ccatgcgaagtctgcaggctgtggctctggctgcggcggcggttgcggtggcggctgtgg 7402
Query: 510 tggcggcatggtcatggaaggctccaag 537
|||||||||||||||||| ||||||||
Sbjct: 7403 cggcggcatggtcatggaaagctccaag 7430
Score = 69.9 bits (35), Expect = 1e-08
Identities = 110/135 (81%)
Strand = Plus / Plus
Query: 363 caagtcaggcggttgcggttcaggctgtggcggcggttgcggtggtggcggttgtgccag 422
|||||| ||||| ||||| |||||||| |||||||| |||||||| ||| | ||| | |
Sbjct: 7442 caagtccggcggctgcggctcaggctgcggcggcggctgcggtggaggctgcggtggcgg 7501
Query: 423 catggtcatggaaggctccaggatgagccatgccaagtctgagggctgcggttcaggctg 482
| ||| |||||| |||||| | | ||||||||||| | |||||||||||||||||
Sbjct: 7502 cgtggccatggagagctccaccgttggacatgccaagtccggtggctgcggttcaggctg 7561
Query: 483 tggcgccggctgcgg 497
||||| |||||||||
Sbjct: 7562 tggcggcggctgcgg 7576
Score = 54.0 bits (27), Expect = 6e-04
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 362 ccaagtcaggcggttgcggttcaggctgtggcggcggttgcgg 404
||||||| || || ||||||||||||||||||||||| |||||
Sbjct: 7534 ccaagtccggtggctgcggttcaggctgtggcggcggctgcgg 7576
Score = 48.1 bits (24), Expect = 0.038
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 122 gctccaaaactggccatgccaagtcaggcggatgtggctcaggctgtggcgg 173
||||||| ||||||||| |||||| ||||| || ||||||||||| |||||
Sbjct: 7423 gctccaaggctggccatgtcaagtccggcggctgcggctcaggctgcggcgg 7474
Score = 44.1 bits (22), Expect = 0.59
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 478 ggctgtggcgccggctgcggtggcggcggttgtggcgg 515
|||||||| | |||||||||||||||||| || |||||
Sbjct: 7599 ggctgtggtggcggctgcggtggcggcggctgcggcgg 7636
Score = 44.1 bits (22), Expect = 0.59
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 385 ggctgtggcggcggttgcggtggtgg 410
||||||||||||||||| ||||||||
Sbjct: 7167 ggctgtggcggcggttgtggtggtgg 7192
Score = 40.1 bits (20), Expect = 9.2
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 133 ggccatgccaagtcaggcggatgtggctcaggctgtggcggtgg 176
||||||| |||||| || ||||||||||| ||||| || |||||
Sbjct: 7245 ggccatggcaagtccggtggatgtggctcgggctgcggtggtgg 7288
>dbj|AB032934.1 | Vibrio alginolyticus pfsA, orfC, orfD genes for PF60 and hypothetical
proteins, complete cds
Length = 4547
Score = 40.1 bits (20), Expect = 9.2
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 388 tgtggcggcggttgcggtggtggcggttgtgc 419
|||||||||||| ||||||| |||||| ||||
Sbjct: 1132 tgtggcggcggtggcggtggcggcggtggtgc 1163
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,054,508
Number of Sequences: 3902068
Number of extensions: 5054508
Number of successful extensions: 124795
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122341
Number of HSP's gapped (non-prelim): 2407
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)