ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63h18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 1078 0.0
2gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 622 e-175
3gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 410 e-111
4gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 224 2e-55
5gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 214 2e-52
6gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 214 2e-52
7gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 204 2e-49
8gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 194 2e-46
9dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 194 2e-46
10dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
11dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
12dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
13dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 194 2e-46
14dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 194 2e-46
15dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 9e-46
16gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 190 3e-45
17gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
18gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
20gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 170 3e-39
21gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 155 2e-34
22gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 133 7e-28
23gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 129 1e-26
24gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 129 1e-26
25gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 129 1e-26
26dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
27gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb... 66 1e-07
28gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph... 58 3e-05
29gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA... 56 1e-04
30emb|AL772194.6| Mouse DNA sequence from clone RP23-331M18 on chr... 48 0.032
31ref|NM_001034112.1| Rattus norvegicus MAX-like protein X (Mlx), ... 44 0.50
32ref|XM_853556.1| PREDICTED: Canis familiaris similar to Transcri... 44 0.50
33ref|XM_844284.1| PREDICTED: Canis familiaris similar to Transcri... 44 0.50
34gb|DQ350893.1| Rattus norvegicus strain COP/CrCrl max-like facto... 44 0.50
35gb|DQ350892.1| Rattus norvegicus strain ACI/SegHsd max-like fact... 44 0.50
36gb|DQ350891.1| Rattus norvegicus strain BN/SsNHsd max-like facto... 44 0.50
37gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 44 0.50
38emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in ... 44 0.50
39gb|DQ306205.1| Takifugu rubripes odorant receptor (OR11306-1) ge... 44 0.50
40dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.50
41gb|AC182435.3| Mus musculus chromosome 8, clone wi1-1119F24, com... 42 2.0
42emb|BX248357.1| Corynebacterium diphtheriae gravis NCTC13129, co... 42 2.0
43gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, comple... 42 2.0
44emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 7.8
45emb|CR388060.19| Zebrafish DNA sequence from clone DKEY-208J8 in... 40 7.8
46ref|XM_546868.2| PREDICTED: Canis familiaris similar to dipeptid... 40 7.8
47gb|AC108416.5| Mus musculus chromosome 14, clone RP23-114J12, co... 40 7.8
48emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chr... 40 7.8
49emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 7.8
50emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in... 40 7.8
51emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, ... 40 7.8
52emb|BX927222.8| Zebrafish DNA sequence from clone CH211-256M12 i... 40 7.8
53dbj|AK129018.1| Mus musculus cDNA fis, clone TRACH3033868, highl... 40 7.8
54dbj|AK137463.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 7.8
55emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chro... 40 7.8
56gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nippon... 40 7.8
57dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
58dbj|AB127607.1| Mus musculus Sema3G mRNA for Semaphorin 3G, comp... 40 7.8
59gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 7.8
60emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in... 40 7.8
61gb|AC006566.2|AC006566 Homo sapiens chromosome 18, clone hRPK.37... 40 7.8
62ref|NM_001025379.1| Mus musculus sema domain, immunoglobulin dom... 40 7.8
63dbj|AP005900.1| Homo sapiens genomic DNA, chromosome 18p clone:R... 40 7.8
64gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.8
65gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8 
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score = 1078 bits (544), Expect = 0.0
 Identities = 544/544 (100%)
 Strand = Plus / Plus

                                                                       
Query: 31  atcagctccatccatcactgacgatcgatctcagtccacctgcatctgtaggtgtactag 90
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   atcagctccatccatcactgacgatcgatctcagtccacctgcatctgtaggtgtactag 61

                                                                       
Query: 91  tagtacgccggcctaatccagctgagagctgatcgagctagcttgcatataccactgcac 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  tagtacgccggcctaatccagctgagagctgatcgagctagcttgcatataccactgcac 121

                                                                       
Query: 151 gtacgcacatcaaattaattagaaactactgtaattaagttatcagcagcgagaagagaa 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtacgcacatcaaattaattagaaactactgtaattaagttatcagcagcgagaagagaa 181

                                                                       
Query: 211 cgatcgatcaacaccatggcttctgctttctcgtccaccgttggagctccggcgtcgacc 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgatcgatcaacaccatggcttctgctttctcgtccaccgttggagctccggcgtcgacc 241

                                                                       
Query: 271 ccgaccatcttcctgggcaagaaggtgaagaactactaccatggtggcaacaagatgaag 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccgaccatcttcctgggcaagaaggtgaagaactactaccatggtggcaacaagatgaag 301

                                                                       
Query: 331 agcagggtggtgagggtcatggcggccaaaaaggaacttgaccagggcaagcagaccgat 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agcagggtggtgagggtcatggcggccaaaaaggaacttgaccagggcaagcagaccgat 361

                                                                       
Query: 391 gcggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgg 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgg 421

                                                                       
Query: 451 gggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggcc 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggcc 481

                                                                       
Query: 511 atcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacc 570
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atcctaagctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacacc 541

               
Query: 571 atgg 574
           ||||
Sbjct: 542 atgg 545
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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  622 bits (314), Expect = e-175
 Identities = 314/314 (100%)
 Strand = Plus / Plus

                                                                        
Query: 261  ggcgtcgaccccgaccatcttcctgggcaagaaggtgaagaactactaccatggtggcaa 320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2801 ggcgtcgaccccgaccatcttcctgggcaagaaggtgaagaactactaccatggtggcaa 2860

                                                                        
Query: 321  caagatgaagagcagggtggtgagggtcatggcggccaaaaaggaacttgaccagggcaa 380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2861 caagatgaagagcagggtggtgagggtcatggcggccaaaaaggaacttgaccagggcaa 2920

                                                                        
Query: 381  gcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgaccagcagga 440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2921 gcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgaccagcagga 2980

                                                                        
Query: 441  catcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcac 500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2981 catcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggcac 3040

                                                                        
Query: 501  ccacgaggccatcctaagctcctacgagtacatcagccagggcctgcggaagtacgactt 560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3041 ccacgaggccatcctaagctcctacgagtacatcagccagggcctgcggaagtacgactt 3100

                          
Query: 561  cgacaacaccatgg 574
            ||||||||||||||
Sbjct: 3101 cgacaacaccatgg 3114



 Score =  505 bits (255), Expect = e-140
 Identities = 262/263 (99%), Gaps = 1/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gctaaccactgcacccctctcttttatcc-tatcagctccatccatcactgacgatcgat 59
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 318 gctaaccactgcacccctctcttttatccatatcagctccatccatcactgacgatcgat 377

                                                                       
Query: 60  ctcagtccacctgcatctgtaggtgtactagtagtacgccggcctaatccagctgagagc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctcagtccacctgcatctgtaggtgtactagtagtacgccggcctaatccagctgagagc 437

                                                                       
Query: 120 tgatcgagctagcttgcatataccactgcacgtacgcacatcaaattaattagaaactac 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgatcgagctagcttgcatataccactgcacgtacgcacatcaaattaattagaaactac 497

                                                                       
Query: 180 tgtaattaagttatcagcagcgagaagagaacgatcgatcaacaccatggcttctgcttt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgtaattaagttatcagcagcgagaagagaacgatcgatcaacaccatggcttctgcttt 557

                                  
Query: 240 ctcgtccaccgttggagctccgg 262
           |||||||||||||||||||||||
Sbjct: 558 ctcgtccaccgttggagctccgg 580



 Score =  214 bits (108), Expect = 2e-52
 Identities = 159/176 (90%)
 Strand = Plus / Plus

                                                                        
Query: 399  gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 458
            |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 5662 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 5721

                                                                        
Query: 459  catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 518
            |||||||||||| || |||||||| |||| |||  ||||||||||||||||| |||| ||
Sbjct: 5722 catcgtggactcgctcttccaggcgcccacggggcacggcacccacgaggccgtcctcag 5781

                                                                    
Query: 519  ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatgg 574
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5782 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgg 5837
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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  410 bits (207), Expect = e-111
 Identities = 258/275 (93%)
 Strand = Plus / Plus

                                                                       
Query: 300 gaactactaccatggtggcaacaagatgaagagcagggtggtgagggtcatggcggccaa 359
           ||||||||||||||||||||||||||| || |  |||||||| |||| ||||||||||||
Sbjct: 118 gaactactaccatggtggcaacaagatcaacaatagggtggtcagggccatggcggccaa 177

                                                                       
Query: 360 aaaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacga 419
           ||||||||||||| ||||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 178 aaaggaacttgacgagggcaagcagaccgatgccgatcggtggaagggtctcgcttacga 237

                                                                       
Query: 420 catctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttcca 479
           |||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 238 catctccgatgaccagcaggacatcacgagggggaaaggcatcgtggactccctgttcca 297

                                                                       
Query: 480 ggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagcca 539
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 298 ggcccccatgggcgacggcacccacgaggccatcctgagctcctacgagtacatcagcca 357

                                              
Query: 540 gggcctgcggaagtacgacttcgacaacaccatgg 574
           ||||||||| |||||||||||||||||||||||||
Sbjct: 358 gggcctgcgcaagtacgacttcgacaacaccatgg 392



 Score =  131 bits (66), Expect = 3e-27
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                       
Query: 221 acaccatggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatct 280
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 21  acacgatggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccacct 80

                                 
Query: 281 tcctgggcaagaaggtgaagaa 302
           |||| || ||||||||||||||
Sbjct: 81  tcctcgggaagaaggtgaagaa 102
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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  224 bits (113), Expect = 2e-55
 Identities = 179/201 (89%)
 Strand = Plus / Plus

                                                                       
Query: 374 agggcaagcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgacc 433
           |||||||||||||||| | ||||  ||||||||| || |||||||| ||||| |||||||
Sbjct: 237 agggcaagcagaccgacggggacaagtggaagggcctcgcctacgatatctccgacgacc 296

                                                                       
Query: 434 agcaggacatcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcg 493
           |||||||||||||  |||| || || ||||| ||||||||||||||||| ||||||||||
Sbjct: 297 agcaggacatcaccaggggtaagggtatcgtcgactccctgttccaggcgcccatgggcg 356

                                                                       
Query: 494 acggcacccacgaggccatcctaagctcctacgagtacatcagccagggcctgcggaagt 553
           | ||||||||||||||| |||| ||||||||||||||| |||||||||||||   |||||
Sbjct: 357 atggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctcaagaagt 416

                                
Query: 554 acgacttcgacaacaccatgg 574
           |||||||||||||||||||||
Sbjct: 417 acgacttcgacaacaccatgg 437



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| |||||||| ||||||||||| || || ||||||| |||||| 
Sbjct: 80  atggctgctgccttctcctccaccgtcggagctccggcttccacgccgaccagcttcctc 139

                
Query: 286 ggcaa 290
           |||||
Sbjct: 140 ggcaa 144
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>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  214 bits (108), Expect = 2e-52
 Identities = 159/176 (90%)
 Strand = Plus / Plus

                                                                       
Query: 399 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 458
           |||||||||||| ||   ||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 321 gtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaaggg 380

                                                                       
Query: 459 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 518
           |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 381 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 440

                                                                   
Query: 519 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatgg 574
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgg 496
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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  214 bits (108), Expect = 2e-52
 Identities = 159/176 (90%)
 Strand = Plus / Plus

                                                                       
Query: 399 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 458
           |||||||||||| ||   ||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 66  gtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaaggg 125

                                                                       
Query: 459 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 518
           |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 126 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 185

                                                                   
Query: 519 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatgg 574
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgg 241
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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  204 bits (103), Expect = 2e-49
 Identities = 176/201 (87%)
 Strand = Plus / Plus

                                                                       
Query: 374 agggcaagcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgacc 433
           |||||||||||||||| | ||||  ||||||||| || |||||||| ||||| |||||||
Sbjct: 227 agggcaagcagaccgacggggacaagtggaagggcctcgcctacgatatctccgacgacc 286

                                                                       
Query: 434 agcaggacatcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcg 493
           |||||||||||||  |||| || || ||||| |||||| |||||||||| ||||||||||
Sbjct: 287 agcaggacatcaccaggggtaagggtatcgtcgactccttgttccaggcgcccatgggcg 346

                                                                       
Query: 494 acggcacccacgaggccatcctaagctcctacgagtacatcagccagggcctgcggaagt 553
           | || |||||||||||| |||| ||||| ||||||||| |||||||||||||   |||||
Sbjct: 347 atggnacccacgaggccgtcctcagctcntacgagtacgtcagccagggcctcaagaagt 406

                                
Query: 554 acgacttcgacaacaccatgg 574
           |||||||||||||||||||||
Sbjct: 407 acgacttcgacaacaccatgg 427



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| |||||||| ||||||||||| || || || |||| |||||| 
Sbjct: 70  atggctgctgccttctcctccaccgtcggagctccggcttccacgccnaccagcttcctc 129

                
Query: 286 ggcaa 290
           |||||
Sbjct: 130 ggcaa 134
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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 179 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 238

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 239 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 298

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 299 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 358

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 359 ggtctcagaacgtacgacttcgacaacaccatgg 392



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 35  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 94

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 95  gggaagaagctgaagaa 111
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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 171 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 230

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 231 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 290

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 291 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 350

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 351 ggtctcagaacgtacgacttcgacaacaccatgg 384



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 27  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 86

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 87  gggaagaagctgaagaa 103
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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 219 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 278

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 279 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 338

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 339 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 398

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 399 ggtctcagaacgtacgacttcgacaacaccatgg 432



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 75  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 134

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 135 gggaagaagctgaagaa 151
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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 208 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 267

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 268 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 327

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 328 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 387

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 388 ggtctcagaacgtacgacttcgacaacaccatgg 421



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 64  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 123

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 124 gggaagaagctgaagaa 140
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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 207 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 266

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 267 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 326

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 327 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 386

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 387 ggtctcagaacgtacgacttcgacaacaccatgg 420



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 63  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 122

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 123 gggaagaagctgaagaa 139
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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 212 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 271

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 272 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 331

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 332 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 391

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 392 ggtctcagaacgtacgacttcgacaacaccatgg 425



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 68  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 127

                         
Query: 286 ggcaagaaggtgaa 299
           || |||||| ||||
Sbjct: 128 gggaagaagctgaa 141
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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  194 bits (98), Expect = 2e-46
 Identities = 185/214 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 206 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 265

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 266 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 325

                                                                       
Query: 481 gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
           || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 326 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 385

                                             
Query: 541 ggcctgcggaagtacgacttcgacaacaccatgg 574
           || ||  | | |||||||||||||||||||||||
Sbjct: 386 ggtctcagaacgtacgacttcgacaacaccatgg 419



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 62  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 121

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 122 gggaagaagctgaagaa 138
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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  192 bits (97), Expect = 9e-46
 Identities = 175/201 (87%)
 Strand = Plus / Plus

                                                                       
Query: 374 agggcaagcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgacc 433
           ||||||||||||||||   |||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 4   agggcaagcagaccgaccaggacaggtggaagggtctcgcctacgacatctccgatgacc 63

                                                                       
Query: 434 agcaggacatcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcg 493
           |||||||||||||  ||||||| ||  |||| |||||||| |||||||| |||| ||| |
Sbjct: 64  agcaggacatcaccagggggaagggtttcgtcgactcccttttccaggctcccacgggtg 123

                                                                       
Query: 494 acggcacccacgaggccatcctaagctcctacgagtacatcagccagggcctgcggaagt 553
           | ||||||||||||||| |||| ||||||||||||||| |||||||||| ||  | | ||
Sbjct: 124 atggcacccacgaggccgtcctcagctcctacgagtacctcagccagggtctcagaacgt 183

                                
Query: 554 acgacttcgacaacaccatgg 574
           |||||||||||||||||||||
Sbjct: 184 acgacttcgacaacaccatgg 204
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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Plus

                                                                       
Query: 399 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 458
           |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 241 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 300

                                                                       
Query: 459 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 518
           ||||||||||||||| |||||||| ||||  ||||||||||||||||||||| |||| ||
Sbjct: 301 catcgtggactccctcttccaggcgcccactggcgacggcacccacgaggccgtcctcag 360

                                                                   
Query: 519 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatgg 574
           ||| ||||||||| |||||||||| ||   ||||||||||||||||||||||||||
Sbjct: 361 ctcatacgagtacgtcagccagggactcaagaagtacgacttcgacaacaccatgg 416
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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  170 bits (86), Expect = 3e-39
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                          
Query: 361    aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
              ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 109739 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 109680

                                                                          
Query: 421    atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
              ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 109679 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 109620

                                                                          
Query: 481    gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
              || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 109619 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 109560

                
Query: 541    gg 542
              ||
Sbjct: 109559 gg 109558



 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                          
Query: 397    cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 456
              ||||||||||| || || ||||||||||| ||||||||||||||||||||  ||||||| 
Sbjct: 113207 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 113148

                                                                   
Query: 457    ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 509
              ||| |||| ||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 113147 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 226    atggcttctgctttctcgtccaccgttggagctccgg 262
              |||||| |||| ||||| |||||||||||||||||||
Sbjct: 109982 atggctgctgccttctcctccaccgttggagctccgg 109946



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 552    gtacgacttcgacaacaccatgg 574
              |||||||||||||||||||||||
Sbjct: 109435 gtacgacttcgacaacaccatgg 109413



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 226    atggcttctgctttctcgtccaccgttggagctccgg 262
              ||||||||||||||||| ||||| || ||||| ||||
Sbjct: 113920 atggcttctgctttctcctccactgtcggagccccgg 113884
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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  170 bits (86), Expect = 3e-39
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                         
Query: 361   aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
             ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 31616 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 31557

                                                                         
Query: 421   atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
             ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 31556 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 31497

                                                                         
Query: 481   gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
             || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 31496 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 31437

               
Query: 541   gg 542
             ||
Sbjct: 31436 gg 31435



 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                         
Query: 397   cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 456
             ||||||||||| || || ||||||||||| ||||||||||||||||||||  ||||||| 
Sbjct: 35084 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 35025

                                                                  
Query: 457   ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 509
             ||| |||| ||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 35024 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 226   atggcttctgctttctcgtccaccgttggagctccgg 262
             |||||| |||| ||||| |||||||||||||||||||
Sbjct: 31859 atggctgctgccttctcctccaccgttggagctccgg 31823



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 552   gtacgacttcgacaacaccatgg 574
             |||||||||||||||||||||||
Sbjct: 31312 gtacgacttcgacaacaccatgg 31290



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 226   atggcttctgctttctcgtccaccgttggagctccgg 262
             ||||||||||||||||| ||||| || ||||| ||||
Sbjct: 35797 atggcttctgctttctcctccactgtcggagccccgg 35761
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  170 bits (86), Expect = 3e-39
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                            
Query: 361      aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
                ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 28304878 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 28304819

                                                                            
Query: 421      atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
                ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 28304818 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 28304759

                                                                            
Query: 481      gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
                || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 28304758 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 28304699

                  
Query: 541      gg 542
                ||
Sbjct: 28304698 gg 28304697



 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                            
Query: 397      cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 456
                ||||||||||| || || ||||||||||| ||||||||||||||||||||  ||||||| 
Sbjct: 28308346 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 28308287

                                                                     
Query: 457      ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 509
                ||| |||| ||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 28308286 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 226      atggcttctgctttctcgtccaccgttggagctccgg 262
                |||||| |||| ||||| |||||||||||||||||||
Sbjct: 28305121 atggctgctgccttctcctccaccgttggagctccgg 28305085



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 552      gtacgacttcgacaacaccatgg 574
                |||||||||||||||||||||||
Sbjct: 28304574 gtacgacttcgacaacaccatgg 28304552



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 226      atggcttctgctttctcgtccaccgttggagctccgg 262
                ||||||||||||||||| ||||| || ||||| ||||
Sbjct: 28309059 atggcttctgctttctcctccactgtcggagccccgg 28309023
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  170 bits (86), Expect = 3e-39
 Identities = 158/182 (86%)
 Strand = Plus / Minus

                                                                            
Query: 361      aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
                ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 28287327 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 28287268

                                                                            
Query: 421      atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
                ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 28287267 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 28287208

                                                                            
Query: 481      gcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcagccag 540
                || |||| ||| || ||||||||||||||| |||| ||||||||||||||| ||||||||
Sbjct: 28287207 gctcccacgggtgatggcacccacgaggccgtcctcagctcctacgagtacctcagccag 28287148

                  
Query: 541      gg 542
                ||
Sbjct: 28287147 gg 28287146



 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Minus

                                                                            
Query: 397      cggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaa 456
                ||||||||||| || || ||||||||||| ||||||||||||||||||||  ||||||| 
Sbjct: 28290795 cggtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaag 28290736

                                                                     
Query: 457      ggcatcgtggactccctgttccaggcccccatgggcgacggcacccacgaggc 509
                ||| |||| ||||||||||||||||| |||||||| || ||||||||||||||
Sbjct: 28290735 ggcctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                     
Query: 226      atggcttctgctttctcgtccaccgttggagctccgg 262
                |||||| |||| ||||| |||||||||||||||||||
Sbjct: 28287570 atggctgctgccttctcctccaccgttggagctccgg 28287534



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 552      gtacgacttcgacaacaccatgg 574
                |||||||||||||||||||||||
Sbjct: 28287023 gtacgacttcgacaacaccatgg 28287001



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 226      atggcttctgctttctcgtccaccgttggagctccgg 262
                ||||||||||||||||| ||||| || ||||| ||||
Sbjct: 28291508 atggcttctgctttctcctccactgtcggagccccgg 28291472
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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/166 (86%)
 Strand = Plus / Plus

                                                                       
Query: 379 aagcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgaccagcag 438
           ||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 198 aagcagaccgacgaggacaggtggaagggcctggcctacgacatctcggacgaccagcag 257

                                                                       
Query: 439 gacatcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggc 498
           ||||||||  |||| || ||| |||| |||  ||| |||||||| || ||||| ||||||
Sbjct: 258 gacatcaccaggggcaagggcctcgtcgacaacctcttccaggcgcctatgggggacggc 317

                                                         
Query: 499 acccacgaggccatcctaagctcctacgagtacatcagccagggcc 544
           |||||||  ||| | || ||||||||||| ||||||||||||||||
Sbjct: 318 acccacgtcgccgtgctcagctcctacgactacatcagccagggcc 363



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 238 ttctcgtccaccgttggagctccggcgtcgaccccgacca 277
           ||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 33  ttctcctccaccgtcggagctccggcctccaccccgacca 72
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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  133 bits (67), Expect = 7e-28
 Identities = 140/166 (84%)
 Strand = Plus / Plus

                                                                       
Query: 379 aagcagaccgatgcggaccggtggaagggtctggcctacgacatctcggacgaccagcag 438
           ||||||||||| | |||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 198 aagcagaccgacgaggacaggtggaagggcctggcctacgacatctcggacgaccagcag 257

                                                                       
Query: 439 gacatcactcgggggaaaggcatcgtggactccctgttccaggcccccatgggcgacggc 498
           ||||||||  |||| || ||| |||| |||  ||| |||||||| || ||     |||||
Sbjct: 258 gacatcaccaggggcaagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggc 317

                                                         
Query: 499 acccacgaggccatcctaagctcctacgagtacatcagccagggcc 544
           |||||||  ||| | || ||||||||||| ||||||||||||||||
Sbjct: 318 acccacgtcgccgtgctcagctcctacgactacatcagccagggcc 363



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 238 ttctcgtccaccgttggagctccggcgtcgaccccgacca 277
           ||||| |||||||| ||||||||||| || ||||||||||
Sbjct: 33  ttctcctccaccgtcggagctccggcctccaccccgacca 72
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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  129 bits (65), Expect = 1e-26
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 417 cgacatctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgtt 476
           ||||| |||||| |||||||||||||||||  ||||||| ||||| || |||||||||||
Sbjct: 222 cgacacctcggatgaccagcaggacatcaccagggggaagggcatggtcgactccctgtt 281

                                                                       
Query: 477 ccaggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcag 536
           |||||| |||||||||||||| |||||| |  || |||| ||||||||||||||||||||
Sbjct: 282 ccaggctcccatgggcgacggaacccacaaccccgtcctgagctcctacgagtacatcag 341

            
Query: 537 c 537
           |
Sbjct: 342 c 342
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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  129 bits (65), Expect = 1e-26
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 417 cgacatctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgtt 476
           ||||| |||||| |||||||||||||||||  ||||||| ||||| || |||||||||||
Sbjct: 85  cgacacctcggatgaccagcaggacatcaccagggggaagggcatggtcgactccctgtt 144

                                                                       
Query: 477 ccaggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcag 536
           |||||| |||||||||||||| |||||| |  || |||| ||||||||||||||||||||
Sbjct: 145 ccaggctcccatgggcgacggaacccacaaccccgtcctgagctcctacgagtacatcag 204

            
Query: 537 c 537
           |
Sbjct: 205 c 205
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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  129 bits (65), Expect = 1e-26
 Identities = 107/121 (88%)
 Strand = Plus / Plus

                                                                       
Query: 417 cgacatctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgtt 476
           ||||| |||||| |||||||||||||||||  ||||||| ||||| || |||||||||||
Sbjct: 115 cgacacctcggatgaccagcaggacatcaccagggggaagggcatggtcgactccctgtt 174

                                                                       
Query: 477 ccaggcccccatgggcgacggcacccacgaggccatcctaagctcctacgagtacatcag 536
           |||||| |||||||||||||| |||||| |  || |||| ||||||||||||||||||||
Sbjct: 175 ccaggctcccatgggcgacggaacccacaaccccgtcctgagctcctacgagtacatcag 234

            
Query: 537 c 537
           |
Sbjct: 235 c 235
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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  107 bits (54), Expect = 4e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                       
Query: 361 aaggaacttgaccagggcaagcagaccgatgcggaccggtggaagggtctggcctacgac 420
           ||||| || ||| ||||||||||||||||   |||| ||||||||||||| |||||||||
Sbjct: 207 aaggagctggacgagggcaagcagaccgaccaggacaggtggaagggtctcgcctacgac 266

                                                                       
Query: 421 atctcggacgaccagcaggacatcactcgggggaaaggcatcgtggactccctgttccag 480
           ||||| || |||||||||||||||||  ||||||| ||  |||| |||||||| ||||||
Sbjct: 267 atctccgatgaccagcaggacatcaccagggggaagggtttcgtcgactcccttttccag 326

             
Query: 481 gc 482
           ||
Sbjct: 327 gc 328



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 226 atggcttctgctttctcgtccaccgttggagctccggcgtcgaccccgaccatcttcctg 285
           |||||| |||| ||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 63  atggctgctgccttctcctccaccgttggagctccggcgtccactccgaccaacttcctg 122

                            
Query: 286 ggcaagaaggtgaagaa 302
           || |||||| |||||||
Sbjct: 123 gggaagaagctgaagaa 139



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 518 gctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatgg 574
           |||||||||||||| |||||||||| ||  | | |||||||||||||||||||||||
Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgg 383
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>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 81/97 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 452
           |||||| ||||| ||  |||| ||||| || ||||||||||| |||||||| ||||| ||
Sbjct: 87  ggaccgatggaaagggttggcttacgatatttcggacgaccaacaggacattactcgagg 146

                                                
Query: 453 gaaaggcatcgtggactccctgttccaggcccccatg 489
           |||||| || ||||| ||| ||||||| || ||||||
Sbjct: 147 gaaagggatggtggattccttgttccaagctcccatg 183
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>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 80/97 (82%)
 Strand = Plus / Plus

                                                                       
Query: 393 ggaccggtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggg 452
           |||||| ||||| ||  |||| ||||| || ||||||||||| || ||||| ||||| ||
Sbjct: 88  ggaccgatggaaagggttggcttacgatatttcggacgaccaacaagacattactcgagg 147

                                                
Query: 453 gaaaggcatcgtggactccctgttccaggcccccatg 489
           |||||| || ||||| ||| ||||||| || ||||||
Sbjct: 148 gaaagggatggtggattccttgttccaagctcccatg 184
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>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 400 tggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaa 455
           |||||||||||||||||||| ||||| || ||||| || ||||||||  |||||||
Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaa 350
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>emb|AL772194.6| Mouse DNA sequence from clone RP23-331M18 on chromosome 4, complete
              sequence
          Length = 176496

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 21     cttttatcctatcagctccatcca 44
              ||||||||||||||||||||||||
Sbjct: 147549 cttttatcctatcagctccatcca 147526
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>ref|NM_001034112.1| Rattus norvegicus MAX-like protein X (Mlx), mRNA
          Length = 1913

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 aaggcatcgtggactccctgttccag 480
           |||||||| |||||||||||||||||
Sbjct: 734 aaggcatcatggactccctgttccag 759
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>ref|XM_853556.1| PREDICTED: Canis familiaris similar to Transcription factor-like
           protein 4 (Max-like bHLHZip protein) (BigMax protein)
           (Mlx), transcript variant 2 (LOC607668), mRNA
          Length = 1055

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 aaggcatcgtggactccctgttccag 480
           |||||||| |||||||||||||||||
Sbjct: 681 aaggcatcatggactccctgttccag 706
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>ref|XM_844284.1| PREDICTED: Canis familiaris similar to Transcription factor-like
           protein 4 (Max-like bHLHZip protein) (BigMax protein)
           (Mlx), transcript variant 1 (LOC607668), mRNA
          Length = 1120

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 aaggcatcgtggactccctgttccag 480
           |||||||| |||||||||||||||||
Sbjct: 746 aaggcatcatggactccctgttccag 771
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>gb|DQ350893.1| Rattus norvegicus strain COP/CrCrl max-like factor protein (Mlx)
           mRNA, complete cds
          Length = 920

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 aaggcatcgtggactccctgttccag 480
           |||||||| |||||||||||||||||
Sbjct: 571 aaggcatcatggactccctgttccag 596
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>gb|DQ350892.1| Rattus norvegicus strain ACI/SegHsd max-like factor protein (Mlx)
           mRNA, complete cds
          Length = 920

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 aaggcatcgtggactccctgttccag 480
           |||||||| |||||||||||||||||
Sbjct: 571 aaggcatcatggactccctgttccag 596
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>gb|DQ350891.1| Rattus norvegicus strain BN/SsNHsd max-like factor protein (Mlx)
           mRNA, complete cds
          Length = 920

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 455 aaggcatcgtggactccctgttccag 480
           |||||||| |||||||||||||||||
Sbjct: 571 aaggcatcatggactccctgttccag 596
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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 512 tcctaagctcctacgagtacatcagc 537
           |||| |||||||||||||||||||||
Sbjct: 16  tcctgagctcctacgagtacatcagc 41
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>emb|BX085195.5| Zebrafish DNA sequence from clone DKEY-226A5 in linkage group 3,
             complete sequence
          Length = 227111

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 159   atcaaattaattagaaactactgtaattaa 188
             |||||||||||||||||||| | |||||||
Sbjct: 94967 atcaaattaattagaaactattctaattaa 94996
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>gb|DQ306205.1| Takifugu rubripes odorant receptor (OR11306-1) gene, complete cds
          Length = 771

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 324 gatgaagagcagggtggtgagggtca 349
           |||||||||||||||||||| |||||
Sbjct: 51  gatgaagagcagggtggtgacggtca 26
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 471     cctgttccaggcccccatgggcgacg 496
               |||||||||||||||| |||||||||
Sbjct: 1044278 cctgttccaggcccccctgggcgacg 1044253
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>gb|AC182435.3| Mus musculus chromosome 8, clone wi1-1119F24, complete sequence
          Length = 37516

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 468   ctccctgttccaggcccccat 488
             |||||||||||||||||||||
Sbjct: 35702 ctccctgttccaggcccccat 35722
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>emb|BX248357.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
             4/8
          Length = 349535

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   ataccactgcacgtacgcaca 159
             |||||||||||||||||||||
Sbjct: 40071 ataccactgcacgtacgcaca 40091
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>gb|AC149051.4| Mus musculus BAC clone RP24-325F10 from 8, complete sequence
          Length = 184939

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 155    gcacatcaaattaattagaaa 175
              |||||||||||||||||||||
Sbjct: 141560 gcacatcaaattaattagaaa 141580
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 492    cgacggcacccacgaggccatcct 515
              |||||||||| |||||||||||||
Sbjct: 961727 cgacggcacctacgaggccatcct 961704
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>emb|CR388060.19| Zebrafish DNA sequence from clone DKEY-208J8 in linkage group 16,
              complete sequence
          Length = 213586

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    acatcaaattaattagaaac 176
              ||||||||||||||||||||
Sbjct: 134825 acatcaaattaattagaaac 134844
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>ref|XM_546868.2| PREDICTED: Canis familiaris similar to dipeptidase 3 (LOC489748),
           mRNA
          Length = 1368

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 ggcacccacgaggccatcct 515
           ||||||||||||||||||||
Sbjct: 309 ggcacccacgaggccatcct 290
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>gb|AC108416.5| Mus musculus chromosome 14, clone RP23-114J12, complete sequence
          Length = 227555

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 316   ggcaacaagatgaagagcagggtg 339
             ||||| ||||||||||||||||||
Sbjct: 71317 ggcaagaagatgaagagcagggtg 71340
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>emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chromosome 9 Contains the
             5' end of the APBA1 gene for myloid beta (A4) precursor
             protein-binding, family A, member 1 (X11), two novel
             genes, the 5' end of a novel gene possible ortholog of
             mouse RIKEN cDNA 1700028P14 gene and two CpG islands,
             complete sequence
          Length = 189277

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cacatcaaattaattagaaa 175
             ||||||||||||||||||||
Sbjct: 60853 cacatcaaattaattagaaa 60834
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     ttcctgggcaagaaggtgaa 299
               ||||||||||||||||||||
Sbjct: 2810912 ttcctgggcaagaaggtgaa 2810931
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>emb|BX936324.6| Zebrafish DNA sequence from clone CH211-74F16 in linkage group 3,
              complete sequence
          Length = 154312

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    atcaaattaattagaaacta 178
              ||||||||||||||||||||
Sbjct: 118154 atcaaattaattagaaacta 118135
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>emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, complete sequence
          Length = 190733

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 166   taattagaaactactgtaattaag 189
             |||||| |||||||||||||||||
Sbjct: 63356 taattacaaactactgtaattaag 63379
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>emb|BX927222.8| Zebrafish DNA sequence from clone CH211-256M12 in linkage group 16,
              complete sequence
          Length = 154714

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    acatcaaattaattagaaac 176
              ||||||||||||||||||||
Sbjct: 111012 acatcaaattaattagaaac 110993
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>dbj|AK129018.1| Mus musculus cDNA fis, clone TRACH3033868, highly similar to Homo
            sapiens semaphorin sem2
          Length = 4540

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  ggcaacaagatgaagagcagggtg 339
            ||||| ||||||||||||||||||
Sbjct: 2328 ggcaagaagatgaagagcagggtg 2351
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>dbj|AK137463.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830005K22 product:Semaphorin sem2
            (FLJ00014 protein) homolog [Homo sapiens], full insert
            sequence
          Length = 4532

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  ggcaacaagatgaagagcagggtg 339
            ||||| ||||||||||||||||||
Sbjct: 2330 ggcaagaagatgaagagcagggtg 2353
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>emb|AL732624.6| Mouse DNA sequence from clone RP23-118D1 on chromosome 4, complete
             sequence
          Length = 110038

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cacatcaaattaattagaaa 175
             ||||||||||||||||||||
Sbjct: 30211 cacatcaaattaattagaaa 30192
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>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0045C13, from Chromosome 10, complete sequence
          Length = 161250

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     ctctcttttatcctatcagc 36
              ||||||||||||||||||||
Sbjct: 121074 ctctcttttatcctatcagc 121055
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      ctctcttttatcctatcagc 36
               ||||||||||||||||||||
Sbjct: 9888595 ctctcttttatcctatcagc 9888576
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>dbj|AB127607.1| Mus musculus Sema3G mRNA for Semaphorin 3G, complete cds
          Length = 3686

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  ggcaacaagatgaagagcagggtg 339
            ||||| ||||||||||||||||||
Sbjct: 2313 ggcaagaagatgaagagcagggtg 2336
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>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    ggtcatggcggccaaaaagg 364
              ||||||||||||||||||||
Sbjct: 711783 ggtcatggcggccaaaaagg 711764
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>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19,
              complete sequence
          Length = 180994

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    taattagaaactactgtaattaag 189
              |||||| |||||||||||||||||
Sbjct: 115724 taattacaaactactgtaattaag 115701
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>gb|AC006566.2|AC006566 Homo sapiens chromosome 18, clone hRPK.376_P_6, complete sequence
          Length = 189199

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    aaattaattagaaactactg 181
              ||||||||||||||||||||
Sbjct: 129327 aaattaattagaaactactg 129308
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>ref|NM_001025379.1| Mus musculus sema domain, immunoglobulin domain (Ig), short basic
            domain, secreted, (semaphorin) 3G (Sema3g), mRNA
          Length = 3686

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 316  ggcaacaagatgaagagcagggtg 339
            ||||| ||||||||||||||||||
Sbjct: 2313 ggcaagaagatgaagagcagggtg 2336
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>dbj|AP005900.1| Homo sapiens genomic DNA, chromosome 18p clone:RP11-931H21, complete
              sequence
          Length = 215253

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    aaattaattagaaactactg 181
              ||||||||||||||||||||
Sbjct: 187843 aaattaattagaaactactg 187862
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 427     gacgaccagcaggacatcac 446
               ||||||||||||||||||||
Sbjct: 1452086 gacgaccagcaggacatcac 1452067
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      ctctcttttatcctatcagc 36
               ||||||||||||||||||||
Sbjct: 9894634 ctctcttttatcctatcagc 9894615


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,461,370
Number of Sequences: 3902068
Number of extensions: 4461370
Number of successful extensions: 85381
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85020
Number of HSP's gapped (non-prelim): 359
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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