ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63h16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483478.1| Oryza sativa (japonica cultivar-group), mRNA 450 e-123
2dbj|AK072408.1| Oryza sativa (japonica cultivar-group) cDNA clon... 450 e-123
3emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRN... 208 2e-50
4dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
7dbj|AK061879.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 4e-08
8ref|XM_962047.1| PREDICTED: Tribolium castaneum similar to CG680... 42 2.1
9ref|XM_970960.1| PREDICTED: Tribolium castaneum similar to CG680... 42 2.1
10ref|XM_961866.1| PREDICTED: Tribolium castaneum similar to Larva... 42 2.1
11ref|XM_970909.1| PREDICTED: Tribolium castaneum similar to Larva... 42 2.1
12emb|AJ421012.3|LLU421012 Lupinus luteus mRNA for putative metall... 42 2.1
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
14emb|BX005420.7| Zebrafish DNA sequence from clone CH211-163I12 i... 42 2.1
15dbj|AK121432.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
16dbj|AK065128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
17gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
18emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.1
19gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.2
20ref|NM_186617.2| Oryza sativa (japonica cultivar-group), mRNA 40 8.2
21gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete s... 40 8.2
22emb|CR652324.2|CNS0F2AY Tetraodon nigroviridis full-length cDNA 40 8.2
23ref|XM_969045.1| PREDICTED: Tribolium castaneum similar to CG324... 40 8.2
24emb|Z98756.1|MLCB2492 Mycobacterium leprae cosmid B2492 40 8.2
25emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete ... 40 8.2
26dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
27dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
28dbj|AK107502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.2
29emb|CR956621.10| Pig DNA sequence from clone CH242-201E3 on chro... 40 8.2
30dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 8.2
31dbj|AB016845.1| Streptomyces thermoviolaceus NagR gene, complete... 40 8.2 
>ref|XM_483478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2234

 Score =  450 bits (227), Expect = e-123
 Identities = 507/600 (84%), Gaps = 9/600 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  gagccgctgctctgcacggcgccgatcaagtatcagtatgccaactactcggcgaactac 71
           ||||||||||||||||| || || || |||||||| |  || ||||||||||||||||||
Sbjct: 366 gagccgctgctctgcactgcaccaataaagtatcaattcgcaaactactcggcgaactac 425

                                                                       
Query: 72  ctcaaaggaggcaagggcagcatccggctccagctcatcaaccagcgcgccgacttctcc 131
            |  |  | |||||||||||||||||| ||||||||||||||||||||  ||||||||||
Sbjct: 426 gtgtactggggcaagggcagcatccggttccagctcatcaaccagcgctacgacttctcc 485

                                                                       
Query: 132 ttcgccctcttcaccggcggcctcgaaaacccgaagttggtgtcggtgtcgaagaaggtg 191
           |||||||| |||||||||||||| |||||||| ||| ||||| |||||||| ||  | | 
Sbjct: 486 ttcgccctgttcaccggcggcctggaaaaccctaagctggtggcggtgtcggaggcgata 545

                                                                       
Query: 192 atgttcaagaaccctaaggcgccggtgttcccgcggctggcgcagggcaagacccacgac 251
             |||||||||||| ||||||||||||| ||| |||||||||||||||||| |  |||||
Sbjct: 546 tcgttcaagaaccccaaggcgccggtgtaccctcggctggcgcagggcaagtcgtacgac 605

                                                                       
Query: 252 gagatgaccgtgacctggaccagcggctacgacgttaacgaggcctacccgttcgtggag 311
           ||||||||||| || |||||||||||||||||| | | |||||| ||||||||||| |||
Sbjct: 606 gagatgaccgtcacatggaccagcggctacgacatcagcgaggcgtacccgttcgtcgag 665

                                                                       
Query: 312 tggggcatggtcg------gcgccgccgg---aacgcgcacccccgccgggacactgacc 362
           |||||||||||||      |||||||||    ||| |||||| ||||||| || || |||
Sbjct: 666 tggggcatggtcgtcgccggcgccgccgctccaacccgcaccgccgccggcacgctcacc 725

                                                                       
Query: 363 ttcaaccgcggcagcatgtgcggcgagccggcacgaactgttggatggagagatcccggg 422
           ||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 726 ttcaaccgcggcagcatgtgcggtgagccggcacgcactgttgggtggagagaccccggg 785

                                                                       
Query: 423 ttcatccacactgcgttcatgaggaacctgtggcccaacaaagagtacttttacaagatc 482
           ||||||||||| || ||| ||||  ||||||||||||||||||||||||  |||||||| 
Sbjct: 786 ttcatccacacagctttcctgagagacctgtggcccaacaaagagtactactacaagatt 845

                                                                       
Query: 483 gggcacgagctctccgacggaagtgtggtgtgggccaagccctacactttccgggcaccg 542
           ||||| || || || ||||||    | || |||| |||||  |||||||||||||| || 
Sbjct: 846 gggcatgaactttctgacggatcaattgtctggggcaagcaatacactttccgggcgcca 905

                                                                       
Query: 543 ccaacccccgggcagaactcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcg 602
           ||   ||| || |||||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 906 cccttccctggccagaactcgctgcaacgcatcatcgtcttcggcgacatgggcaaggcg 965
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>dbj|AK072408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083H19, full
           insert sequence
          Length = 2233

 Score =  450 bits (227), Expect = e-123
 Identities = 507/600 (84%), Gaps = 9/600 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  gagccgctgctctgcacggcgccgatcaagtatcagtatgccaactactcggcgaactac 71
           ||||||||||||||||| || || || |||||||| |  || ||||||||||||||||||
Sbjct: 365 gagccgctgctctgcactgcaccaataaagtatcaattcgcaaactactcggcgaactac 424

                                                                       
Query: 72  ctcaaaggaggcaagggcagcatccggctccagctcatcaaccagcgcgccgacttctcc 131
            |  |  | |||||||||||||||||| ||||||||||||||||||||  ||||||||||
Sbjct: 425 gtgtactggggcaagggcagcatccggttccagctcatcaaccagcgctacgacttctcc 484

                                                                       
Query: 132 ttcgccctcttcaccggcggcctcgaaaacccgaagttggtgtcggtgtcgaagaaggtg 191
           |||||||| |||||||||||||| |||||||| ||| ||||| |||||||| ||  | | 
Sbjct: 485 ttcgccctgttcaccggcggcctggaaaaccctaagctggtggcggtgtcggaggcgata 544

                                                                       
Query: 192 atgttcaagaaccctaaggcgccggtgttcccgcggctggcgcagggcaagacccacgac 251
             |||||||||||| ||||||||||||| ||| |||||||||||||||||| |  |||||
Sbjct: 545 tcgttcaagaaccccaaggcgccggtgtaccctcggctggcgcagggcaagtcgtacgac 604

                                                                       
Query: 252 gagatgaccgtgacctggaccagcggctacgacgttaacgaggcctacccgttcgtggag 311
           ||||||||||| || |||||||||||||||||| | | |||||| ||||||||||| |||
Sbjct: 605 gagatgaccgtcacatggaccagcggctacgacatcagcgaggcgtacccgttcgtcgag 664

                                                                       
Query: 312 tggggcatggtcg------gcgccgccgg---aacgcgcacccccgccgggacactgacc 362
           |||||||||||||      |||||||||    ||| |||||| ||||||| || || |||
Sbjct: 665 tggggcatggtcgtcgccggcgccgccgctccaacccgcaccgccgccggcacgctcacc 724

                                                                       
Query: 363 ttcaaccgcggcagcatgtgcggcgagccggcacgaactgttggatggagagatcccggg 422
           ||||||||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 725 ttcaaccgcggcagcatgtgcggtgagccggcacgcactgttgggtggagagaccccggg 784

                                                                       
Query: 423 ttcatccacactgcgttcatgaggaacctgtggcccaacaaagagtacttttacaagatc 482
           ||||||||||| || ||| ||||  ||||||||||||||||||||||||  |||||||| 
Sbjct: 785 ttcatccacacagctttcctgagagacctgtggcccaacaaagagtactactacaagatt 844

                                                                       
Query: 483 gggcacgagctctccgacggaagtgtggtgtgggccaagccctacactttccgggcaccg 542
           ||||| || || || ||||||    | || |||| |||||  |||||||||||||| || 
Sbjct: 845 gggcatgaactttctgacggatcaattgtctggggcaagcaatacactttccgggcgcca 904

                                                                       
Query: 543 ccaacccccgggcagaactcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcg 602
           ||   ||| || |||||||||||||| || |||||||||||||| |||||||| ||||||
Sbjct: 905 cccttccctggccagaactcgctgcaacgcatcatcgtcttcggcgacatgggcaaggcg 964
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>emb|AJ581660.1|HVU581660 Hordeum vulgare chloroplast partial mRNA for nucleotide
           pyrophosphatase/phosphodiesterase (npp gene)
          Length = 1268

 Score =  208 bits (105), Expect = 2e-50
 Identities = 108/109 (99%)
 Strand = Plus / Plus

                                                                       
Query: 494 ctccgacggaagtgtggtgtgggccaagccctacactttccgggcaccgccaacccccgg 553
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctccgacggaagcgtggtgtgggccaagccctacactttccgggcaccgccaacccccgg 60

                                                            
Query: 554 gcagaactcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcg 602
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcagaactcgctgcagcgtatcatcgtcttcggtgacatgggaaaggcg 109
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  174 bits (88), Expect = 2e-40
 Identities = 173/201 (86%), Gaps = 9/201 (4%)
 Strand = Plus / Plus

                                                                            
Query: 194      gttcaagaaccctaaggcgccggtgttcccgcggctggcgcagggcaagacccacgacga 253
                |||||||||||| ||||||||||||| ||| |||||||||||||||||| |  |||||||
Sbjct: 26434824 gttcaagaaccccaaggcgccggtgtaccctcggctggcgcagggcaagtcgtacgacga 26434883

                                                                            
Query: 254      gatgaccgtgacctggaccagcggctacgacgttaacgaggcctacccgttcgtggagtg 313
                ||||||||| || |||||||||||||||||| | | |||||| ||||||||||| |||||
Sbjct: 26434884 gatgaccgtcacatggaccagcggctacgacatcagcgaggcgtacccgttcgtcgagtg 26434943

                                                                            
Query: 314      gggcatggt------cggcgccgccg---gaacgcgcacccccgccgggacactgacctt 364
                |||||||||      |||||||||||    ||| |||||| ||||||| || || |||||
Sbjct: 26434944 gggcatggtcgtcgccggcgccgccgctccaacccgcaccgccgccggcacgctcacctt 26435003

                                     
Query: 365      caaccgcggcagcatgtgcgg 385
                |||||||||||||||||||||
Sbjct: 26435004 caaccgcggcagcatgtgcgg 26435024



 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                            
Query: 54       aactactcggcgaactacctcaaaggaggcaagggcagcatccggctccagctcatcaac 113
                |||||||||||||||||| |  |  | |||||||||||||||||| ||||||||||||||
Sbjct: 26434531 aactactcggcgaactacgtgtactggggcaagggcagcatccggttccagctcatcaac 26434590

                                                                
Query: 114      cagcgcgccgacttctccttcgccctcttcaccggcggcctcgaaaac 161
                ||||||  |||||||||||||||||| |||||||||||||| ||||||
Sbjct: 26434591 cagcgctacgacttctccttcgccctgttcaccggcggcctggaaaac 26434638



 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                            
Query: 387      gagccggcacgaactgttggatggagagatcccgggttcatccacactgcgttcatgagg 446
                ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||| |||| 
Sbjct: 26435527 gagccggcacgcactgttgggtggagagaccccgggttcatccacacagctttcctgaga 26435586

                                       
Query: 447      aacctgtggcccaacaaagagta 469
                 ||||||||||||||||||||||
Sbjct: 26435587 gacctgtggcccaacaaagagta 26435609



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                            
Query: 525      tacactttccgggcaccgccaacccccgggcagaactcgctgcagcgtatcatcgtcttc 584
                |||||||||||||| || ||   ||| || |||||||||||||| || ||||||||||||
Sbjct: 26436043 tacactttccgggcgccacccttccctggccagaactcgctgcaacgcatcatcgtcttc 26436102

                                
Query: 585      ggtgacatgggaaagg 600
                || |||||||| ||||
Sbjct: 26436103 ggcgacatgggcaagg 26436118
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>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score =  174 bits (88), Expect = 2e-40
 Identities = 173/201 (86%), Gaps = 9/201 (4%)
 Strand = Plus / Plus

                                                                         
Query: 194   gttcaagaaccctaaggcgccggtgttcccgcggctggcgcagggcaagacccacgacga 253
             |||||||||||| ||||||||||||| ||| |||||||||||||||||| |  |||||||
Sbjct: 84376 gttcaagaaccccaaggcgccggtgtaccctcggctggcgcagggcaagtcgtacgacga 84435

                                                                         
Query: 254   gatgaccgtgacctggaccagcggctacgacgttaacgaggcctacccgttcgtggagtg 313
             ||||||||| || |||||||||||||||||| | | |||||| ||||||||||| |||||
Sbjct: 84436 gatgaccgtcacatggaccagcggctacgacatcagcgaggcgtacccgttcgtcgagtg 84495

                                                                         
Query: 314   gggcatggt------cggcgccgccg---gaacgcgcacccccgccgggacactgacctt 364
             |||||||||      |||||||||||    ||| |||||| ||||||| || || |||||
Sbjct: 84496 gggcatggtcgtcgccggcgccgccgctccaacccgcaccgccgccggcacgctcacctt 84555

                                  
Query: 365   caaccgcggcagcatgtgcgg 385
             |||||||||||||||||||||
Sbjct: 84556 caaccgcggcagcatgtgcgg 84576



 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                         
Query: 54    aactactcggcgaactacctcaaaggaggcaagggcagcatccggctccagctcatcaac 113
             |||||||||||||||||| |  |  | |||||||||||||||||| ||||||||||||||
Sbjct: 84083 aactactcggcgaactacgtgtactggggcaagggcagcatccggttccagctcatcaac 84142

                                                             
Query: 114   cagcgcgccgacttctccttcgccctcttcaccggcggcctcgaaaac 161
             ||||||  |||||||||||||||||| |||||||||||||| ||||||
Sbjct: 84143 cagcgctacgacttctccttcgccctgttcaccggcggcctggaaaac 84190



 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                         
Query: 387   gagccggcacgaactgttggatggagagatcccgggttcatccacactgcgttcatgagg 446
             ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||| |||| 
Sbjct: 85079 gagccggcacgcactgttgggtggagagaccccgggttcatccacacagctttcctgaga 85138

                                    
Query: 447   aacctgtggcccaacaaagagta 469
              ||||||||||||||||||||||
Sbjct: 85139 gacctgtggcccaacaaagagta 85161



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                         
Query: 525   tacactttccgggcaccgccaacccccgggcagaactcgctgcagcgtatcatcgtcttc 584
             |||||||||||||| || ||   ||| || |||||||||||||| || ||||||||||||
Sbjct: 85595 tacactttccgggcgccacccttccctggccagaactcgctgcaacgcatcatcgtcttc 85654

                             
Query: 585   ggtgacatgggaaagg 600
             || |||||||| ||||
Sbjct: 85655 ggcgacatgggcaagg 85670
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>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score =  174 bits (88), Expect = 2e-40
 Identities = 173/201 (86%), Gaps = 9/201 (4%)
 Strand = Plus / Plus

                                                                          
Query: 194    gttcaagaaccctaaggcgccggtgttcccgcggctggcgcagggcaagacccacgacga 253
              |||||||||||| ||||||||||||| ||| |||||||||||||||||| |  |||||||
Sbjct: 164405 gttcaagaaccccaaggcgccggtgtaccctcggctggcgcagggcaagtcgtacgacga 164464

                                                                          
Query: 254    gatgaccgtgacctggaccagcggctacgacgttaacgaggcctacccgttcgtggagtg 313
              ||||||||| || |||||||||||||||||| | | |||||| ||||||||||| |||||
Sbjct: 164465 gatgaccgtcacatggaccagcggctacgacatcagcgaggcgtacccgttcgtcgagtg 164524

                                                                          
Query: 314    gggcatggt------cggcgccgccg---gaacgcgcacccccgccgggacactgacctt 364
              |||||||||      |||||||||||    ||| |||||| ||||||| || || |||||
Sbjct: 164525 gggcatggtcgtcgccggcgccgccgctccaacccgcaccgccgccggcacgctcacctt 164584

                                   
Query: 365    caaccgcggcagcatgtgcgg 385
              |||||||||||||||||||||
Sbjct: 164585 caaccgcggcagcatgtgcgg 164605



 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                          
Query: 54     aactactcggcgaactacctcaaaggaggcaagggcagcatccggctccagctcatcaac 113
              |||||||||||||||||| |  |  | |||||||||||||||||| ||||||||||||||
Sbjct: 164112 aactactcggcgaactacgtgtactggggcaagggcagcatccggttccagctcatcaac 164171

                                                              
Query: 114    cagcgcgccgacttctccttcgccctcttcaccggcggcctcgaaaac 161
              ||||||  |||||||||||||||||| |||||||||||||| ||||||
Sbjct: 164172 cagcgctacgacttctccttcgccctgttcaccggcggcctggaaaac 164219



 Score =  101 bits (51), Expect = 3e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                          
Query: 387    gagccggcacgaactgttggatggagagatcccgggttcatccacactgcgttcatgagg 446
              ||||||||||| |||||||| |||||||| ||||||||||||||||| || ||| |||| 
Sbjct: 165108 gagccggcacgcactgttgggtggagagaccccgggttcatccacacagctttcctgaga 165167

                                     
Query: 447    aacctgtggcccaacaaagagta 469
               ||||||||||||||||||||||
Sbjct: 165168 gacctgtggcccaacaaagagta 165190



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                          
Query: 525    tacactttccgggcaccgccaacccccgggcagaactcgctgcagcgtatcatcgtcttc 584
              |||||||||||||| || ||   ||| || |||||||||||||| || ||||||||||||
Sbjct: 165624 tacactttccgggcgccacccttccctggccagaactcgctgcaacgcatcatcgtcttc 165683

                              
Query: 585    ggtgacatgggaaagg 600
              || |||||||| ||||
Sbjct: 165684 ggcgacatgggcaagg 165699
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>dbj|AK061879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E10, full
           insert sequence
          Length = 1355

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 525 tacactttccgggcaccgccaacccccgggcagaactcgctgcagcgtatcatcgtcttc 584
           |||||||||||||| || ||   ||| || |||||||||||||| || ||||||||||||
Sbjct: 59  tacactttccgggcgccacccttccctggccagaactcgctgcaacgcatcatcgtcttc 118

                             
Query: 585 ggtgacatgggaaaggcg 602
           || |||||||| ||||||
Sbjct: 119 ggcgacatgggcaaggcg 136
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>ref|XM_962047.1| PREDICTED: Tribolium castaneum similar to CG6806-PA, transcript
           variant 1 (LOC660335), mRNA
          Length = 2360

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 48  tatgccaactactcggcgaactacctcaa 76
           |||||||||||||||| | ||||||||||
Sbjct: 614 tatgccaactactcggggtactacctcaa 642
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>ref|XM_970960.1| PREDICTED: Tribolium castaneum similar to CG6806-PA, transcript
           variant 2 (LOC660335), mRNA
          Length = 2394

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 48  tatgccaactactcggcgaactacctcaa 76
           |||||||||||||||| | ||||||||||
Sbjct: 648 tatgccaactactcggggtactacctcaa 676
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>ref|XM_961866.1| PREDICTED: Tribolium castaneum similar to Larval serum protein 1
           gamma chain precursor (Hexamerin 1 gamma), transcript
           variant 1 (LOC660274), mRNA
          Length = 2387

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 48  tatgccaactactcggcgaactacctcaa 76
           |||||||||||||||| | ||||||||||
Sbjct: 598 tatgccaactactcggggtactacctcaa 626
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>ref|XM_970909.1| PREDICTED: Tribolium castaneum similar to Larval serum protein 1
           gamma chain precursor (Hexamerin 1 gamma), transcript
           variant 2 (LOC660274), mRNA
          Length = 2384

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 48  tatgccaactactcggcgaactacctcaa 76
           |||||||||||||||| | ||||||||||
Sbjct: 598 tatgccaactactcggggtactacctcaa 626
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>emb|AJ421012.3|LLU421012 Lupinus luteus mRNA for putative metallophosphatase (ppd4 gene)
          Length = 2136

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 565  tgcagcgtatcatcgtcttcggtgacatgggaaaggc 601
            |||||||| | ||| | ||||||||||||||||||||
Sbjct: 1027 tgcagcgtgttatcatattcggtgacatgggaaaggc 1063
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 390      ccggcacgaactgttggatgg 410
                |||||||||||||||||||||
Sbjct: 23840814 ccggcacgaactgttggatgg 23840794
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>emb|BX005420.7| Zebrafish DNA sequence from clone CH211-163I12 in linkage group 25,
            complete sequence
          Length = 142324

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 6    cctgccgagccgctgctctgcacgg 30
            ||||| |||||||||||||||||||
Sbjct: 9917 cctgcagagccgctgctctgcacgg 9941
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>dbj|AK121432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138J08, full
           insert sequence
          Length = 2237

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 390 ccggcacgaactgttggatgg 410
           |||||||||||||||||||||
Sbjct: 782 ccggcacgaactgttggatgg 802
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>dbj|AK065128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P11, full
           insert sequence
          Length = 2139

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 390 ccggcacgaactgttggatgg 410
           |||||||||||||||||||||
Sbjct: 760 ccggcacgaactgttggatgg 780
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 390      ccggcacgaactgttggatgg 410
                |||||||||||||||||||||
Sbjct: 23769019 ccggcacgaactgttggatgg 23768999
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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144767

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 390    ccggcacgaactgttggatgg 410
              |||||||||||||||||||||
Sbjct: 132369 ccggcacgaactgttggatgg 132389
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     ttcgccctcttcaccggcgg 151
               ||||||||||||||||||||
Sbjct: 2335116 ttcgccctcttcaccggcgg 2335135
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>ref|NM_186617.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2691

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  cttctccttcgccctcttca 144
            ||||||||||||||||||||
Sbjct: 1009 cttctccttcgccctcttca 1028
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>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence
          Length = 40150

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  ctggcgcagggcaagaccca 247
            ||||||||||||||||||||
Sbjct: 9293 ctggcgcagggcaagaccca 9312
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>emb|CR652324.2|CNS0F2AY Tetraodon nigroviridis full-length cDNA
          Length = 1350

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 gttggtgtcggtgtcgaaga 186
           ||||||||||||||||||||
Sbjct: 991 gttggtgtcggtgtcgaaga 972
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>ref|XM_969045.1| PREDICTED: Tribolium castaneum similar to CG32498-PO, isoform O
            (LOC662977), mRNA
          Length = 3393

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  cttctccttcgccctcttca 144
            ||||||||||||||||||||
Sbjct: 3370 cttctccttcgccctcttca 3351
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>emb|Z98756.1|MLCB2492 Mycobacterium leprae cosmid B2492
          Length = 37144

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    gtaccctgccgagccgctgc 21
            ||||||||||||||||||||
Sbjct: 1027 gtaccctgccgagccgctgc 1008
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>emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete genome; segment 7/10
          Length = 348950

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      gtaccctgccgagccgctgc 21
              ||||||||||||||||||||
Sbjct: 243809 gtaccctgccgagccgctgc 243828
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 125     cttctccttcgccctcttca 144
               ||||||||||||||||||||
Sbjct: 6784941 cttctccttcgccctcttca 6784922
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>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0592C06
          Length = 160071

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   cttctccttcgccctcttca 144
             ||||||||||||||||||||
Sbjct: 79075 cttctccttcgccctcttca 79056
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>dbj|AK107502.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E02, full
            insert sequence
          Length = 2691

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  cttctccttcgccctcttca 144
            ||||||||||||||||||||
Sbjct: 1009 cttctccttcgccctcttca 1028
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>emb|CR956621.10| Pig DNA sequence from clone CH242-201E3 on chromosome 17, complete
            sequence
          Length = 83594

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 518  caagccctacactttccggg 537
            ||||||||||||||||||||
Sbjct: 1669 caagccctacactttccggg 1688
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 260     cgtgacctggaccagcggct 279
               ||||||||||||||||||||
Sbjct: 2536524 cgtgacctggaccagcggct 2536505
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>dbj|AB016845.1| Streptomyces thermoviolaceus NagR gene, complete cds
          Length = 1300

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 247 acgacgagatgaccgtgacc 266
           ||||||||||||||||||||
Sbjct: 191 acgacgagatgaccgtgacc 210


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,580,986
Number of Sequences: 3902068
Number of extensions: 3580986
Number of successful extensions: 62616
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62293
Number of HSP's gapped (non-prelim): 310
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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