Clone Name | bah63h15 |
---|---|
Clone Library Name | barley_pub |
>gb|AY106235.1| Zea mays PCO066039 mRNA sequence Length = 1360 Score = 412 bits (208), Expect = e-112 Identities = 394/456 (86%) Strand = Plus / Plus Query: 157 gcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaat 216 ||||||||||||||||| |||| ||| |||||||| || ||||||| |||||||||| Sbjct: 175 gcagctggtgcaggcctccccaatccgtttgatttttcttctatgagcaacttgctcaat 234 Query: 217 gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276 || ||||| ||||| |||||||||||||||||||| || |||||||| |||||||||||| Sbjct: 235 gacccatcgataagagagatggctgagcaaattgcaagtgaccctgtgttcaaccagatg 294 Query: 277 gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336 ||||| ||||||||||||||||| |||||| | || ||||||||| |||| |||||| Sbjct: 295 gctgaacagcttcagaaaagtgctcagggtgctggagaacagggtattcctgcattggat 354 Query: 337 cctcaagcatacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaatg 396 |||||| || ||||||| ||| | |||| ||||| || || ||||| |||||||| Sbjct: 355 cctcaacagtatatggaaacaatgcaacaagtcatgcaaaaccctcagtttgtgtcaatg 414 Query: 397 gcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgagaac 456 || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 415 gcagagcgtcttgggaatgcccttatgcaggatcctgctatgtccagtatgcttgagaac 474 Query: 457 ttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgac 516 ||||| ||||||||||| || ||||||||||| ||| | ||| ||||||||||||| || Sbjct: 475 ttgaccagtccagctcataaggagcagcttgaggagaggatggcccgtatcaaggaagat 534 Query: 517 ccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaag 576 || || ||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 535 ccatccttgaagccaattcttgatgagatagagaatgggggtccatctgcaatggtgaag 594 Query: 577 tactggaatgaccctgagattcttcaaaagattggc 612 || ||||||||||||||| ||||||||||||||||| Sbjct: 595 tattggaatgaccctgaggttcttcaaaagattggc 630
>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full insert sequence Length = 1529 Score = 359 bits (181), Expect = 7e-96 Identities = 390/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 156 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 215 |||| ||| |||||||||||||| |||||||||||| || | | |||| ||||||||| Sbjct: 300 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 359 Query: 216 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 275 |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||| Sbjct: 360 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 419 Query: 276 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 335 ||| |||||||| ||||| ||||| || | || ||||||||||||| || ||||| Sbjct: 420 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 479 Query: 336 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 394 |||||| ||| ||| ||||||| |||||| |||| ||||| || || || |||||||||| Sbjct: 480 tcctca-gcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 538 Query: 395 tggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgaga 454 |||| || ||||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 539 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 598 Query: 455 acttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatg 514 ||||||||||| |||| || |||| |||||||||||| ||| ||||||| || || | Sbjct: 599 gtttgactagtccttctcataaggagctgcttgaagagcggatgtcccgtattaaagaag 658 Query: 515 acccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtca 574 | || ||||||||| |||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 659 atccctctttgaaggggattcttgatgagatagagagtggtggtccatctgctatggtga 718 Query: 575 agtactggaatgaccctgagattcttcaaaagattgg 611 ||||||||||||||||||| |||||||||||||||| Sbjct: 719 agtactggaatgaccctgaagttcttcaaaagattgg 755
>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full insert sequence Length = 1475 Score = 359 bits (181), Expect = 7e-96 Identities = 390/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 156 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 215 |||| ||| |||||||||||||| |||||||||||| || | | |||| ||||||||| Sbjct: 300 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 359 Query: 216 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 275 |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||| Sbjct: 360 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 419 Query: 276 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 335 ||| |||||||| ||||| ||||| || | || ||||||||||||| || ||||| Sbjct: 420 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 479 Query: 336 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 394 |||||| ||| ||| ||||||| |||||| |||| ||||| || || || |||||||||| Sbjct: 480 tcctca-gcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 538 Query: 395 tggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgaga 454 |||| || ||||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 539 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 598 Query: 455 acttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatg 514 ||||||||||| |||| || |||| |||||||||||| ||| ||||||| || || | Sbjct: 599 gtttgactagtccttctcataaggagctgcttgaagagcggatgtcccgtattaaagaag 658 Query: 515 acccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtca 574 | || ||||||||| |||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 659 atccctctttgaaggggattcttgatgagatagagagtggtggtccatctgctatggtga 718 Query: 575 agtactggaatgaccctgagattcttcaaaagattgg 611 ||||||||||||||||||| |||||||||||||||| Sbjct: 719 agtactggaatgaccctgaagttcttcaaaagattgg 755
>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full insert sequence Length = 1418 Score = 351 bits (177), Expect = 2e-93 Identities = 389/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 156 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 215 |||| ||| |||||||||||||| |||||||||||| || | | |||| ||||||||| Sbjct: 305 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 364 Query: 216 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 275 |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||| Sbjct: 365 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 424 Query: 276 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 335 ||| |||||||| ||||| ||||| || | || ||||||||||||| || ||||| Sbjct: 425 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 484 Query: 336 tcctcaagcat-acctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 394 |||||| ||| || ||||||| |||||| |||| ||||| || || || |||||||||| Sbjct: 485 tcctca-gcagcacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 543 Query: 395 tggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgaga 454 |||| || ||||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 544 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 603 Query: 455 acttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatg 514 ||||||||||| |||| || |||| |||||||||||| ||| ||||||| || || | Sbjct: 604 gtttgactagtccttctcataaggagctgcttgaagagcggatgtcccgtattaaagaag 663 Query: 515 acccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtca 574 | || ||||||||| |||||||||||||||||| |||||||||||||||| ||||| | Sbjct: 664 atccctctttgaaggggattcttgatgagatagagagtggtggtccatctgctatggtga 723 Query: 575 agtactggaatgaccctgagattcttcaaaagattgg 611 ||||||||||||||||||| |||||||||||||||| Sbjct: 724 agtactggaatgaccctgaagttcttcaaaagattgg 760
>dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated mRNA, clone:psb3-1a Length = 876 Score = 184 bits (93), Expect = 2e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 464 gtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgacccgtctt 523 |||||||||| || ||||||||||||||||||||| | ||||||||||| || || || | Sbjct: 17 gtccagctcataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatcct 76 Query: 524 tgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaagtactgga 583 |||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| Sbjct: 77 tgaagccaattcttgatgagatagagaatggtggtccgtctgctatggtgaagtactgga 136 Query: 584 atgaccctgagattcttcaaaagattggc 612 ||||||||||| ||||||||||||||||| Sbjct: 137 atgaccctgaggttcttcaaaagattggc 165
>gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associated mRNA clone pSUB 3-1a, partial cds Length = 876 Score = 184 bits (93), Expect = 2e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 464 gtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgacccgtctt 523 |||||||||| || ||||||||||||||||||||| | ||||||||||| || || || | Sbjct: 17 gtccagctcataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatcct 76 Query: 524 tgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaagtactgga 583 |||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| Sbjct: 77 tgaagccaattcttgatgagatagagaatggtggtccgtctgctatggtgaagtactgga 136 Query: 584 atgaccctgagattcttcaaaagattggc 612 ||||||||||| ||||||||||||||||| Sbjct: 137 atgaccctgaggttcttcaaaagattggc 165
>emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated mRNA, 876bp Length = 876 Score = 184 bits (93), Expect = 2e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 464 gtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgacccgtctt 523 |||||||||| || ||||||||||||||||||||| | ||||||||||| || || || | Sbjct: 17 gtccagctcataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatcct 76 Query: 524 tgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaagtactgga 583 |||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||| Sbjct: 77 tgaagccaattcttgatgagatagagaatggtggtccgtctgctatggtgaagtactgga 136 Query: 584 atgaccctgagattcttcaaaagattggc 612 ||||||||||| ||||||||||||||||| Sbjct: 137 atgaccctgaggttcttcaaaagattggc 165
>gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated protein mRNA, partial cds Length = 710 Score = 168 bits (85), Expect = 1e-38 Identities = 154/177 (87%) Strand = Plus / Plus Query: 435 aatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagcttgaagagcg 494 ||||||||||||||| |||| ||||||||||| |||| || |||| |||||||||||| Sbjct: 3 aatgtccagtatgctcgagagtttgactagtccttctcataaggagctgcttgaagagcg 62 Query: 495 aatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgagatagagcgtgg 554 ||| ||||||| || || || || ||||||||| |||||||||||||||||| |||| Sbjct: 63 gatgtcccgtattaaagaagatccctctttgaaggggattcttgatgagatagagagtgg 122 Query: 555 tggtccatctgcaatggtcaagtactggaatgaccctgagattcttcaaaagattgg 611 |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 123 tggtccatctgctatggtgaagtactggaatgaccctgaagttcttcaaaagattgg 179
>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0065A15, complete sequence Length = 168806 Score = 143 bits (72), Expect = 8e-31 Identities = 179/212 (84%), Gaps = 2/212 (0%) Strand = Plus / Plus Query: 217 gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276 ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||| Sbjct: 150143 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 150202 Query: 277 gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336 || |||||||| ||||| ||||| || | || ||||||||||||| || |||||| Sbjct: 150203 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 150262 Query: 337 cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 395 |||| |||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||| Sbjct: 150263 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 150321 Query: 396 ggcggagcgtcttgggaatagtcttatgcagg 427 ||| || ||||||||||||| ||||||||||| Sbjct: 150322 ggcagaacgtcttgggaatactcttatgcagg 150353 Score = 133 bits (67), Expect = 7e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 424 caggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcag 483 |||||||||| ||||||||||||||| |||| ||||||||||| |||| || |||| | Sbjct: 150434 caggatcctggaatgtccagtatgctcgagagtttgactagtccttctcataaggagctg 150493 Query: 484 cttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgag 543 ||||||||||| ||| ||||||| || || || || ||||||||| |||||||||||| Sbjct: 150494 cttgaagagcggatgtcccgtattaaagaagatccctctttgaaggggattcttgatgag 150553 Query: 544 atagagcgtggtggtccatctgcaatggtcaagta 578 |||||| |||||||||||||||| ||||| ||||| Sbjct: 150554 atagagagtggtggtccatctgctatggtgaagta 150588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 576 gtactggaatgaccctgagattcttcaaaagattgg 611 |||||||||||||||||| |||||||||||||||| Sbjct: 150663 gtactggaatgaccctgaagttcttcaaaagattgg 150698 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 ggcagctggtgcaggccttcccagtccttttgattt 191 |||| ||| |||||||||||||| |||||||||||| Sbjct: 149969 ggcacctgatgcaggccttcccaatccttttgattt 150004
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 143 bits (72), Expect = 8e-31 Identities = 179/212 (84%), Gaps = 2/212 (0%) Strand = Plus / Plus Query: 217 gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276 ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||| Sbjct: 19667068 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 19667127 Query: 277 gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336 || |||||||| ||||| ||||| || | || ||||||||||||| || |||||| Sbjct: 19667128 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 19667187 Query: 337 cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 395 |||| |||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||| Sbjct: 19667188 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 19667246 Query: 396 ggcggagcgtcttgggaatagtcttatgcagg 427 ||| || ||||||||||||| ||||||||||| Sbjct: 19667247 ggcagaacgtcttgggaatactcttatgcagg 19667278 Score = 133 bits (67), Expect = 7e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 424 caggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcag 483 |||||||||| ||||||||||||||| |||| ||||||||||| |||| || |||| | Sbjct: 19667359 caggatcctggaatgtccagtatgctcgagagtttgactagtccttctcataaggagctg 19667418 Query: 484 cttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgag 543 ||||||||||| ||| ||||||| || || || || ||||||||| |||||||||||| Sbjct: 19667419 cttgaagagcggatgtcccgtattaaagaagatccctctttgaaggggattcttgatgag 19667478 Query: 544 atagagcgtggtggtccatctgcaatggtcaagta 578 |||||| |||||||||||||||| ||||| ||||| Sbjct: 19667479 atagagagtggtggtccatctgctatggtgaagta 19667513 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 576 gtactggaatgaccctgagattcttcaaaagattgg 611 |||||||||||||||||| |||||||||||||||| Sbjct: 19667588 gtactggaatgaccctgaagttcttcaaaagattgg 19667623 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 ggcagctggtgcaggccttcccagtccttttgattt 191 |||| ||| |||||||||||||| |||||||||||| Sbjct: 19666894 ggcacctgatgcaggccttcccaatccttttgattt 19666929
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 143 bits (72), Expect = 8e-31 Identities = 179/212 (84%), Gaps = 2/212 (0%) Strand = Plus / Plus Query: 217 gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276 ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||| Sbjct: 12754 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 12813 Query: 277 gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336 || |||||||| ||||| ||||| || | || ||||||||||||| || |||||| Sbjct: 12814 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 12873 Query: 337 cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 395 |||| |||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||| Sbjct: 12874 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 12932 Query: 396 ggcggagcgtcttgggaatagtcttatgcagg 427 ||| || ||||||||||||| ||||||||||| Sbjct: 12933 ggcagaacgtcttgggaatactcttatgcagg 12964 Score = 133 bits (67), Expect = 7e-28 Identities = 133/155 (85%) Strand = Plus / Plus Query: 424 caggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcag 483 |||||||||| ||||||||||||||| |||| ||||||||||| |||| || |||| | Sbjct: 13045 caggatcctggaatgtccagtatgctcgagagtttgactagtccttctcataaggagctg 13104 Query: 484 cttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgag 543 ||||||||||| ||| ||||||| || || || || ||||||||| |||||||||||| Sbjct: 13105 cttgaagagcggatgtcccgtattaaagaagatccctctttgaaggggattcttgatgag 13164 Query: 544 atagagcgtggtggtccatctgcaatggtcaagta 578 |||||| |||||||||||||||| ||||| ||||| Sbjct: 13165 atagagagtggtggtccatctgctatggtgaagta 13199 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 576 gtactggaatgaccctgagattcttcaaaagattgg 611 |||||||||||||||||| |||||||||||||||| Sbjct: 13274 gtactggaatgaccctgaagttcttcaaaagattgg 13309 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 ggcagctggtgcaggccttcccagtccttttgattt 191 |||| ||| |||||||||||||| |||||||||||| Sbjct: 12580 ggcacctgatgcaggccttcccaatccttttgattt 12615
>gb|AY107283.1| Zea mays PCO076711 mRNA sequence Length = 1604 Score = 139 bits (70), Expect = 1e-29 Identities = 181/218 (83%) Strand = Plus / Plus Query: 394 atggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgag 453 ||||| |||||||| |||||| |||||||||||||||||| |||||||||||||| || Sbjct: 604 atggcagagcgtctggggaatgctcttatgcaggatcctgctatgtccagtatgctggaa 663 Query: 454 aacttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggat 513 | ||| | ||||||| | || || |||||||| |||||||| ||| | || || ||||| Sbjct: 664 acctttagtagtccatcacataaggagcagctggaagagcgtatgtctcgcattaaggaa 723 Query: 514 gacccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtc 573 || || || ||||| |||||||||||||| ||||| ||| || || ||||||||| | Sbjct: 724 gatccagctatgaagtcaattcttgatgagttagagaatgggggcccttctgcaatgatg 783 Query: 574 aagtactggaatgaccctgagattcttcaaaagattgg 611 ||||||||||| |||||||| | ||||||||||||||| Sbjct: 784 aagtactggaacgaccctgatactcttcaaaagattgg 821 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 208 ttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgtattc 267 |||||||||||||||||||| | ||||||||| || |||||||| || || |||| |||| Sbjct: 418 ttgctcaatgatccatctattaaggagatggcagatcaaattgcaagggatcctgcattc 477 Query: 268 aaccagatggctgagcagcttcagaaaagtgcgcagggtacaggggaacaggg 320 |||| ||||||||||||||| |||| |||||| || | ||||| |||||||| Sbjct: 478 aaccggatggctgagcagctacagagaagtgctcaaagcacaggagaacaggg 530
>gb|AY107157.1| Zea mays PCO066038 mRNA sequence Length = 776 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 427 gatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagctt 486 |||||||| |||||||| ||||||||||||||||| | || ||||| || ||| ||||| Sbjct: 306 gatcctgctatgtccagaatgcttgagaacttgaccattctggctcataaggagtagctt 365 Query: 487 gaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgagata 546 || ||| | ||| |||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 366 gaggagaggatggcccgtatcaaggatgatccatccttgaagccaattcttgatgagata 425 Query: 547 gagcgtggtggtccatctgcaatg 570 || ||| |||||||||||||| Sbjct: 426 gataatgggcgtccatctgcaatg 449 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 220 ccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatggct 279 ||||| ||||| |||||||||||||||||||| || |||||||| ||||||||||||| | Sbjct: 200 ccatcaataagagagatggctgagcaaattgcaagtgaccctgtgttcaaccagatggtt 259 Query: 280 gagcagcttcagaaaagtgc 299 || ||||||||||||||||| Sbjct: 260 gaacagcttcagaaaagtgc 279
>gb|DQ123971.1| Coffea arabica x Coffea canephora clone HT-SSH1-G01 mRNA sequence Length = 515 Score = 113 bits (57), Expect = 7e-22 Identities = 153/185 (82%) Strand = Plus / Plus Query: 365 aagttatgcagaatccgcagttcatgtcaatggcggagcgtcttgggaatagtcttatgc 424 |||||||||| ||||| || || ||| ||||||| ||||| ||||| ||| | | |||| Sbjct: 46 aagttatgcaaaatccacaatttatgacaatggctgagcggcttggcaatgctttaatgc 105 Query: 425 aggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagc 484 ||||||| | |||||| | ||||||||||| ||||| | ||||| ||||||||| |||| Sbjct: 106 aggatccatctatgtccggcatgcttgagaatttgaccaatccagttcacaaagaccagc 165 Query: 485 ttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgaga 544 ||||||| |||||| | || |||||||| || || ||||||||||| ||| | ||||||| Sbjct: 166 ttgaagaacgaatgtcacgcatcaaggaggatccttctttgaagcctattttggatgaga 225 Query: 545 tagag 549 ||||| Sbjct: 226 tagag 230
>ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1306 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 392 caatggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttg 451 ||||||| |||||||||||| || |||| || |||||||||||||||||||| |||| | Sbjct: 370 caatggcagagcgtcttggggatgctcttgtgaaggatcctgcaatgtccagtctgctgg 429 Query: 452 agaacttgactagtcca 468 | ||||||||||||||| Sbjct: 430 aaaacttgactagtcca 446 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 204 cagcttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgt 263 |||||||||||||||||||||| ||| |||||| || || || ||||| | ||||||| Sbjct: 197 cagcttgctcaatgatccatctgtaaaggagatagcagatcagattgcaaaggaccctgc 256 Query: 264 attcaaccagatggctgagcag 285 |||| ||||||||| |||||| Sbjct: 257 gttcacccagatggcggagcag 278
>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full insert sequence Length = 1292 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 392 caatggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttg 451 ||||||| |||||||||||| || |||| || |||||||||||||||||||| |||| | Sbjct: 370 caatggcagagcgtcttggggatgctcttgtgaaggatcctgcaatgtccagtctgctgg 429 Query: 452 agaacttgactagtcca 468 | ||||||||||||||| Sbjct: 430 aaaacttgactagtcca 446 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 204 cagcttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgt 263 |||||||||||||||||||||| ||| |||||| || || || ||||| | ||||||| Sbjct: 197 cagcttgctcaatgatccatctgtaaaggagatagcagatcagattgcaaaggaccctgc 256 Query: 264 attcaaccagatggctgagcag 285 |||| ||||||||| |||||| Sbjct: 257 gttcacccagatggcggagcag 278
>gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein mRNA, complete cds Length = 1065 Score = 67.9 bits (34), Expect = 4e-08 Identities = 160/202 (79%) Strand = Plus / Plus Query: 365 aagttatgcagaatccgcagttcatgtcaatggcggagcgtcttgggaatagtcttatgc 424 |||||||||| ||||| || || ||| | ||||| ||||||||||| ||| | |||| Sbjct: 329 aagttatgcaaaatcctcaatttatgactatggctgagcgtcttggtaatgcattaatgc 388 Query: 425 aggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagc 484 ||||||| | |||||||| ||||||||||| ||| ||| |||| | ||||| || |||| Sbjct: 389 aggatccatctatgtccagcatgcttgagaatttggctaatccaacacacaaggaccagc 448 Query: 485 ttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgaga 544 ||||||| ||||| | || || || || || || || |||||||| ||| | ||||||| Sbjct: 449 ttgaagaaagaatggcacgcattaaagaagatccatcattgaagcctattttagatgaga 508 Query: 545 tagagcgtggtggtccatctgc 566 |||| |||||||||| |||| Sbjct: 509 tagaaactggtggtccagctgc 530 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 cctgtattcaaccagatggctgagcagct 287 |||| ||||||||||||||| |||||||| Sbjct: 220 cctgcattcaaccagatggcagagcagct 248
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 425 aggatcctgcaatgtccagtatgcttgagaacttgactagtcca 468 |||||||||||||||||||| |||| || ||||||||||||||| Sbjct: 26976910 aggatcctgcaatgtccagtctgctggaaaacttgactagtcca 26976953
>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0666G10 Length = 150761 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 425 aggatcctgcaatgtccagtatgcttgagaacttgactagtcca 468 |||||||||||||||||||| |||| || ||||||||||||||| Sbjct: 78310 aggatcctgcaatgtccagtctgctggaaaacttgactagtcca 78353
>gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, complete sequence Length = 136875 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 356 ccatgacaaaagttatgcagaat 378 ||||||||||||||||||||||| Sbjct: 36420 ccatgacaaaagttatgcagaat 36442
>gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complete sequence Length = 220878 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 356 ccatgacaaaagttatgcagaat 378 ||||||||||||||||||||||| Sbjct: 34041 ccatgacaaaagttatgcagaat 34063
>gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (TIP3) mRNA, complete cds Length = 1047 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 271 cagatggctgagcagcttcagaa 293 ||||||||||||||||||||||| Sbjct: 241 cagatggctgagcagcttcagaa 263 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 421 atgcaggatcctgcaatgtccagtatgcttgagaacttgac 461 ||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 394 atgcaggatccatctatgtccagcatgcttgagaatttgac 434
>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA, complete cds Length = 1050 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 271 cagatggctgagcagcttcagaa 293 ||||||||||||||||||||||| Sbjct: 244 cagatggctgagcagcttcagaa 266
>emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-repeat protein Length = 700 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 cctgtattcaaccagatggctgagcagcttcagaa 293 |||| ||||||||||||||| |||||||| ||||| Sbjct: 424 cctgcattcaaccagatggcagagcagctccagaa 458
>gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence Length = 1379 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 gaccctgtattcaaccagatggctgagcagcttcagaa 293 ||||||| ||| || |||||||| |||||||||||||| Sbjct: 325 gaccctgcatttaatcagatggcagagcagcttcagaa 362
>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete sequence Length = 196911 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 312 ggaacagggtgttccaagttt 332 ||||||||||||||||||||| Sbjct: 66839 ggaacagggtgttccaagttt 66819
>ref|XM_765535.1| Giardia lamblia ATCC 50803 condensin subunit (GLP_159_9285_14015) partial mRNA Length = 4731 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 atagagcgtggtggtccatctgcaa 568 ||||||| ||||||||||||||||| Sbjct: 1876 atagagcttggtggtccatctgcaa 1852
>gb|BT021194.1| Bos taurus G protein-coupled receptor 61 (GPR61), mRNA, complete cds Length = 2626 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 accactgctgccttccctccc 58 ||||||||||||||||||||| Sbjct: 1369 accactgctgccttccctccc 1349
>ref|NM_001038571.1| Bos taurus G protein-coupled receptor 61 (GPR61), mRNA Length = 2607 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 accactgctgccttccctccc 58 ||||||||||||||||||||| Sbjct: 1369 accactgctgccttccctccc 1349
>ref|NM_179168.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.4 mRNA, complete cds Length = 1377 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 540 tggtggtccttctgccatgatgaagtactggaatga 575
>ref|NM_179166.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.2 mRNA, complete cds Length = 1522 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 685 tggtggtccttctgccatgatgaagtactggaatga 720
>ref|NM_179167.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.3 mRNA, complete cds Length = 1442 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 605 tggtggtccttctgccatgatgaagtactggaatga 640
>ref|NM_119710.3| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2); protein binding AT4G35450 (AKR2) transcript variant AT4G35450.1 mRNA, complete cds Length = 1513 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 676 tggtggtccttctgccatgatgaagtactggaatga 711
>ref|NM_127294.3| Arabidopsis thaliana protein binding / transcription regulator AT2G17390 mRNA, complete cds Length = 1427 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 619 tggtggtccttctgctatgatgaagtactggaatga 654
>ref|XM_476131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 969 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cgccgcttcaccgcttcacc 40 |||||||||||||||||||| Sbjct: 613 cgccgcttcaccgcttcacc 632
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ccactgctgccttccctccc 58 |||||||||||||||||||| Sbjct: 2229 ccactgctgccttccctccc 2210
>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence Length = 176410 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 tctataagggagatggctgagcaa 246 ||||||||| |||||||||||||| Sbjct: 91830 tctataaggaagatggctgagcaa 91807
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cgccgcttcaccgcttcacc 40 |||||||||||||||||||| Sbjct: 35912 cgccgcttcaccgcttcacc 35931
>gb|AC140418.3| Mus musculus BAC clone RP24-418D12 from chromosome 5, complete sequence Length = 129709 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 ctttgaagccaattcttgatgaga 544 ||||||||||||||||| |||||| Sbjct: 44807 ctttgaagccaattcttaatgaga 44784
>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence Length = 217404 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 aggggaacagggtgttccaa 328 |||||||||||||||||||| Sbjct: 113088 aggggaacagggtgttccaa 113107
>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete sequence Length = 197576 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tctttgaagccaattcttga 539 |||||||||||||||||||| Sbjct: 176056 tctttgaagccaattcttga 176037
>emb|AL136988.17| Human DNA sequence from clone RP5-956O18 on chromosome 1q41-42.1 Contains the 3' end of the GALNT2 gene for UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) and two novel genes, complete sequence Length = 73454 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 gcttcaccactgctgccttc 52 |||||||||||||||||||| Sbjct: 16994 gcttcaccactgctgccttc 16975
>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence Length = 213739 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gccttcccagtccttttgatttct 193 |||||| ||||||||||||||||| Sbjct: 103343 gccttctcagtccttttgatttct 103320
>gb|AY142547.1| Arabidopsis thaliana clone RAFL08-16-B13 (R11303) mRNA sequence Length = 1683 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 859 tggtggtccttctgctatgatgaagtactggaatga 894
>emb|CR392356.5| Mouse DNA sequence from clone RP23-329D21 on chromosome 11 Contains a novel gene, the 5' end of the Dock2 gene for dedicator of cyto-kinesis 2 and a CpG island, complete sequence Length = 90351 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ccactgctgccttccctccc 58 |||||||||||||||||||| Sbjct: 54497 ccactgctgccttccctccc 54478
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gccttcccagtccttttgatttct 193 |||||| ||||||||||||||||| Sbjct: 58434 gccttctcagtccttttgatttct 58411
>gb|AY081477.1| Arabidopsis thaliana ankyrin repeat-containing protein 2 (At4g35450) mRNA, complete cds Length = 1100 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 510 tggtggtccttctgccatgatgaagtactggaatga 545
>gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, complete sequence Length = 69570 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctgagcagcttcagaaaagt 297 |||||||||||||||||||| Sbjct: 64256 ctgagcagcttcagaaaagt 64237
>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence Length = 201397 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gccttcccagtccttttgatttct 193 |||||| ||||||||||||||||| Sbjct: 105141 gccttctcagtccttttgatttct 105164
>gb|BT024730.1| Arabidopsis thaliana At2g17390 mRNA, complete cds Length = 1035 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 522 tggtggtccttctgctatgatgaagtactggaatga 557
>emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, complete sequence Length = 230610 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 cttgagaacttgactagtccagct 471 ||||||||||| |||||||||||| Sbjct: 216418 cttgagaactttactagtccagct 216395
>gb|AF386982.1|AF386982 Arabidopsis thaliana ankyrin repeat-containing protein 2 (F15J1.20) mRNA, complete cds Length = 1389 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 685 tggtggtccttctgccatgatgaagtactggaatga 720
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cgccgcttcaccgcttcacc 40 |||||||||||||||||||| Sbjct: 6664750 cgccgcttcaccgcttcacc 6664769
>emb|BX819895.1|CNS0A8GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 619 tggtggtccttctgctatgatgaagtactggaatga 654
>emb|BX826711.1|CNS0A38X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZH12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1333 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 560 tggtggtccttctgccatgatgaagtactggaatga 595
>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence Length = 166892 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gaaggttcaaaatcagaggg 152 |||||||||||||||||||| Sbjct: 80119 gaaggttcaaaatcagaggg 80138
>gb|AY087377.1| Arabidopsis thaliana clone 34698 mRNA, complete sequence Length = 1344 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 640 tggtggtccttctgccatgatgaagtactggaatga 675
>gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8, complete sequence Length = 117406 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 gccttcccagtccttttgatttct 193 |||||| ||||||||||||||||| Sbjct: 100642 gccttctcagtccttttgatttct 100665
>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete sequence Length = 177152 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 gccttcccagtccttttgatttct 193 |||||| ||||||||||||||||| Sbjct: 40875 gccttctcagtccttttgatttct 40852
>gb|U70425.1|ATU70425 Arabidopsis thaliana ankyrin repeat-containing protein 2 (AKR2) mRNA, complete cds Length = 1598 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 766 tggtggtccttctgccatgatgaagtactggaatga 801
>dbj|AP000711.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-51K10, complete sequence Length = 111591 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 cttcaccactgctgccttccctcc 57 ||||| |||||||||||||||||| Sbjct: 82684 cttcatcactgctgccttccctcc 82707
>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete sequence Length = 171747 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 cttcaccactgctgccttccctcc 57 ||||| |||||||||||||||||| Sbjct: 35397 cttcatcactgctgccttccctcc 35420
>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence Length = 169072 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 ctttgaagccaattcttgatgaga 544 ||||||||||||||||| |||||| Sbjct: 54518 ctttgaagccaattcttaatgaga 54541
>gb|AF034387.1|AF034387 Arabidopsis thaliana AFT protein (AFT) mRNA, complete cds Length = 1315 Score = 40.1 bits (20), Expect = 8.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587 ||||||||| ||||| ||| | |||||||||||||| Sbjct: 589 tggtggtccttctgccatgatgaagtactggaatga 624
>gb|AY870248.1| Acanthopagrus schlegelii steroidogenic acute regulatory protein mRNA, partial cds Length = 600 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 593 agattcttcaaaagattggc 612 |||||||||||||||||||| Sbjct: 455 agattcttcaaaagattggc 474
>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete sequence Length = 136540 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gaggggttggcagctggtgc 167 |||||||||||||||||||| Sbjct: 3060 gaggggttggcagctggtgc 3041 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,918,034 Number of Sequences: 3902068 Number of extensions: 4918034 Number of successful extensions: 88435 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88201 Number of HSP's gapped (non-prelim): 223 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)