ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63h15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY106235.1| Zea mays PCO066039 mRNA sequence 412 e-112
2dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 7e-96
3dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 7e-96
4dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 351 2e-93
5dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated m... 184 2e-43
6gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associ... 184 2e-43
7emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated m... 184 2e-43
8gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated prot... 168 1e-38
9gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
11dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
12gb|AY107283.1| Zea mays PCO076711 mRNA sequence 139 1e-29
13gb|AY107157.1| Zea mays PCO066038 mRNA sequence 119 1e-23
14gb|DQ123971.1| Coffea arabica x Coffea canephora clone HT-SSH1-G... 113 7e-22
15ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
16dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
17gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein ... 68 4e-08
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
19dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
20gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, comple... 46 0.14
21gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complet... 46 0.14
22gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (T... 46 0.14
23gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (T... 46 0.14
24emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-re... 46 0.14
25gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence 44 0.53
26gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosom... 42 2.1
27ref|XM_765535.1| Giardia lamblia ATCC 50803 condensin subunit (G... 42 2.1
28gb|BT021194.1| Bos taurus G protein-coupled receptor 61 (GPR61),... 42 2.1
29ref|NM_001038571.1| Bos taurus G protein-coupled receptor 61 (GP... 42 2.1
30ref|NM_179168.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTA... 40 8.3
31ref|NM_179166.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTA... 40 8.3
32ref|NM_179167.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTA... 40 8.3
33ref|NM_119710.3| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTA... 40 8.3
34ref|NM_127294.3| Arabidopsis thaliana protein binding / transcri... 40 8.3
35ref|XM_476131.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
36gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 8.3
37gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, comp... 40 8.3
38gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
39gb|AC140418.3| Mus musculus BAC clone RP24-418D12 from chromosom... 40 8.3
40gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosom... 40 8.3
41emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chrom... 40 8.3
42emb|AL136988.17| Human DNA sequence from clone RP5-956O18 on chr... 40 8.3
43emb|CR936218.6| Human DNA sequence from clone RP11-669E14, compl... 40 8.3
44gb|AY142547.1| Arabidopsis thaliana clone RAFL08-16-B13 (R11303)... 40 8.3
45emb|CR392356.5| Mouse DNA sequence from clone RP23-329D21 on chr... 40 8.3
46emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, compl... 40 8.3
47gb|AY081477.1| Arabidopsis thaliana ankyrin repeat-containing pr... 40 8.3
48gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, comple... 40 8.3
49gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete ... 40 8.3
50gb|BT024730.1| Arabidopsis thaliana At2g17390 mRNA, complete cds 40 8.3
51emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, ... 40 8.3
52gb|AF386982.1|AF386982 Arabidopsis thaliana ankyrin repeat-conta... 40 8.3
53dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
54emb|BX819895.1|CNS0A8GO Arabidopsis thaliana Full-length cDNA Co... 40 8.3
55emb|BX826711.1|CNS0A38X Arabidopsis thaliana Full-length cDNA Co... 40 8.3
56gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, comple... 40 8.3
57gb|AY087377.1| Arabidopsis thaliana clone 34698 mRNA, complete s... 40 8.3
58gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8... 40 8.3
59emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chr... 40 8.3
60gb|U70425.1|ATU70425 Arabidopsis thaliana ankyrin repeat-contain... 40 8.3
61dbj|AP000711.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 8.3
62dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.3
63gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, comp... 40 8.3
64gb|AF034387.1|AF034387 Arabidopsis thaliana AFT protein (AFT) mR... 40 8.3
65gb|AY870248.1| Acanthopagrus schlegelii steroidogenic acute regu... 40 8.3
66emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on ch... 40 8.3

>gb|AY106235.1| Zea mays PCO066039 mRNA sequence
          Length = 1360

 Score =  412 bits (208), Expect = e-112
 Identities = 394/456 (86%)
 Strand = Plus / Plus

                                                                       
Query: 157 gcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaat 216
           ||||||||||||||||| |||| ||| |||||||| ||    ||||||| ||||||||||
Sbjct: 175 gcagctggtgcaggcctccccaatccgtttgatttttcttctatgagcaacttgctcaat 234

                                                                       
Query: 217 gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276
           || ||||| ||||| |||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 235 gacccatcgataagagagatggctgagcaaattgcaagtgaccctgtgttcaaccagatg 294

                                                                       
Query: 277 gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336
           ||||| ||||||||||||||||| |||||| | || ||||||||| ||||    ||||||
Sbjct: 295 gctgaacagcttcagaaaagtgctcagggtgctggagaacagggtattcctgcattggat 354

                                                                       
Query: 337 cctcaagcatacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaatg 396
           ||||||   ||  ||||||| |||  | |||| ||||| || || |||||  ||||||||
Sbjct: 355 cctcaacagtatatggaaacaatgcaacaagtcatgcaaaaccctcagtttgtgtcaatg 414

                                                                       
Query: 397 gcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgagaac 456
           || |||||||||||||||   ||||||||||||||||| |||||||||||||||||||||
Sbjct: 415 gcagagcgtcttgggaatgcccttatgcaggatcctgctatgtccagtatgcttgagaac 474

                                                                       
Query: 457 ttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgac 516
           ||||| ||||||||||| || ||||||||||| ||| | ||| ||||||||||||| || 
Sbjct: 475 ttgaccagtccagctcataaggagcagcttgaggagaggatggcccgtatcaaggaagat 534

                                                                       
Query: 517 ccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaag 576
           || || |||||||||||||||||||||||||||  ||| ||||||||||||||||| |||
Sbjct: 535 ccatccttgaagccaattcttgatgagatagagaatgggggtccatctgcaatggtgaag 594

                                               
Query: 577 tactggaatgaccctgagattcttcaaaagattggc 612
           || ||||||||||||||| |||||||||||||||||
Sbjct: 595 tattggaatgaccctgaggttcttcaaaagattggc 630



to top

>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full
           insert sequence
          Length = 1529

 Score =  359 bits (181), Expect = 7e-96
 Identities = 390/457 (85%), Gaps = 2/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 156 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 215
           |||| ||| |||||||||||||| |||||||||||| ||  |  | |||| |||||||||
Sbjct: 300 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 359

                                                                       
Query: 216 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 275
           |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||
Sbjct: 360 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 419

                                                                       
Query: 276 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 335
           ||| |||||||| ||||| ||||| || |  || |||||||||||||  ||    |||||
Sbjct: 420 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 479

                                                                       
Query: 336 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 394
           |||||| ||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||
Sbjct: 480 tcctca-gcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 538

                                                                       
Query: 395 tggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgaga 454
           |||| || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 539 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 598

                                                                       
Query: 455 acttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatg 514
             |||||||||||  |||| || |||| |||||||||||| ||| ||||||| || || |
Sbjct: 599 gtttgactagtccttctcataaggagctgcttgaagagcggatgtcccgtattaaagaag 658

                                                                       
Query: 515 acccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtca 574
           | || |||||||||   |||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 659 atccctctttgaaggggattcttgatgagatagagagtggtggtccatctgctatggtga 718

                                                
Query: 575 agtactggaatgaccctgagattcttcaaaagattgg 611
           |||||||||||||||||||  ||||||||||||||||
Sbjct: 719 agtactggaatgaccctgaagttcttcaaaagattgg 755



to top

>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full
           insert sequence
          Length = 1475

 Score =  359 bits (181), Expect = 7e-96
 Identities = 390/457 (85%), Gaps = 2/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 156 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 215
           |||| ||| |||||||||||||| |||||||||||| ||  |  | |||| |||||||||
Sbjct: 300 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 359

                                                                       
Query: 216 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 275
           |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||
Sbjct: 360 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 419

                                                                       
Query: 276 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 335
           ||| |||||||| ||||| ||||| || |  || |||||||||||||  ||    |||||
Sbjct: 420 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 479

                                                                       
Query: 336 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 394
           |||||| ||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||
Sbjct: 480 tcctca-gcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 538

                                                                       
Query: 395 tggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgaga 454
           |||| || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 539 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 598

                                                                       
Query: 455 acttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatg 514
             |||||||||||  |||| || |||| |||||||||||| ||| ||||||| || || |
Sbjct: 599 gtttgactagtccttctcataaggagctgcttgaagagcggatgtcccgtattaaagaag 658

                                                                       
Query: 515 acccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtca 574
           | || |||||||||   |||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 659 atccctctttgaaggggattcttgatgagatagagagtggtggtccatctgctatggtga 718

                                                
Query: 575 agtactggaatgaccctgagattcttcaaaagattgg 611
           |||||||||||||||||||  ||||||||||||||||
Sbjct: 719 agtactggaatgaccctgaagttcttcaaaagattgg 755



to top

>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full
           insert sequence
          Length = 1418

 Score =  351 bits (177), Expect = 2e-93
 Identities = 389/457 (85%), Gaps = 2/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 156 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 215
           |||| ||| |||||||||||||| |||||||||||| ||  |  | |||| |||||||||
Sbjct: 305 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 364

                                                                       
Query: 216 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 275
           |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||
Sbjct: 365 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 424

                                                                       
Query: 276 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 335
           ||| |||||||| ||||| ||||| || |  || |||||||||||||  ||    |||||
Sbjct: 425 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 484

                                                                       
Query: 336 tcctcaagcat-acctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 394
           |||||| |||  || ||||||| |||||| |||| ||||| || || || ||||||||||
Sbjct: 485 tcctca-gcagcacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 543

                                                                       
Query: 395 tggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgaga 454
           |||| || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 544 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 603

                                                                       
Query: 455 acttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatg 514
             |||||||||||  |||| || |||| |||||||||||| ||| ||||||| || || |
Sbjct: 604 gtttgactagtccttctcataaggagctgcttgaagagcggatgtcccgtattaaagaag 663

                                                                       
Query: 515 acccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtca 574
           | || |||||||||   |||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 664 atccctctttgaaggggattcttgatgagatagagagtggtggtccatctgctatggtga 723

                                                
Query: 575 agtactggaatgaccctgagattcttcaaaagattgg 611
           |||||||||||||||||||  ||||||||||||||||
Sbjct: 724 agtactggaatgaccctgaagttcttcaaaagattgg 760



to top

>dbj|D37939.1|PENPSB31AB Pennisetum ciliare apomixis-associated mRNA, clone:psb3-1a
          Length = 876

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                       
Query: 464 gtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgacccgtctt 523
           |||||||||| || ||||||||||||||||||||| | ||||||||||| || || || |
Sbjct: 17  gtccagctcataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatcct 76

                                                                       
Query: 524 tgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaagtactgga 583
           ||||||||||||||||||||||||||  ||||||||| ||||| ||||| ||||||||||
Sbjct: 77  tgaagccaattcttgatgagatagagaatggtggtccgtctgctatggtgaagtactgga 136

                                        
Query: 584 atgaccctgagattcttcaaaagattggc 612
           ||||||||||| |||||||||||||||||
Sbjct: 137 atgaccctgaggttcttcaaaagattggc 165



to top

>gb|U13149.1|PCU13149 Pennisetum ciliare possible apospory-associated mRNA clone pSUB
           3-1a, partial cds
          Length = 876

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                       
Query: 464 gtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgacccgtctt 523
           |||||||||| || ||||||||||||||||||||| | ||||||||||| || || || |
Sbjct: 17  gtccagctcataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatcct 76

                                                                       
Query: 524 tgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaagtactgga 583
           ||||||||||||||||||||||||||  ||||||||| ||||| ||||| ||||||||||
Sbjct: 77  tgaagccaattcttgatgagatagagaatggtggtccgtctgctatggtgaagtactgga 136

                                        
Query: 584 atgaccctgagattcttcaaaagattggc 612
           ||||||||||| |||||||||||||||||
Sbjct: 137 atgaccctgaggttcttcaaaagattggc 165



to top

>emb|Z36546.1|PCAPOSPA3 P.ciliare (Higgins) apospory associated mRNA, 876bp
          Length = 876

 Score =  184 bits (93), Expect = 2e-43
 Identities = 135/149 (90%)
 Strand = Plus / Plus

                                                                       
Query: 464 gtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggatgacccgtctt 523
           |||||||||| || ||||||||||||||||||||| | ||||||||||| || || || |
Sbjct: 17  gtccagctcataaggagcagcttgaagagcgaatggctcgtatcaaggaagatccatcct 76

                                                                       
Query: 524 tgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtcaagtactgga 583
           ||||||||||||||||||||||||||  ||||||||| ||||| ||||| ||||||||||
Sbjct: 77  tgaagccaattcttgatgagatagagaatggtggtccgtctgctatggtgaagtactgga 136

                                        
Query: 584 atgaccctgagattcttcaaaagattggc 612
           ||||||||||| |||||||||||||||||
Sbjct: 137 atgaccctgaggttcttcaaaagattggc 165



to top

>gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated protein mRNA, partial
           cds
          Length = 710

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Plus

                                                                       
Query: 435 aatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagcttgaagagcg 494
           ||||||||||||||| ||||  |||||||||||  |||| || |||| ||||||||||||
Sbjct: 3   aatgtccagtatgctcgagagtttgactagtccttctcataaggagctgcttgaagagcg 62

                                                                       
Query: 495 aatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgagatagagcgtgg 554
            ||| ||||||| || || || || |||||||||   |||||||||||||||||| ||||
Sbjct: 63  gatgtcccgtattaaagaagatccctctttgaaggggattcttgatgagatagagagtgg 122

                                                                    
Query: 555 tggtccatctgcaatggtcaagtactggaatgaccctgagattcttcaaaagattgg 611
           |||||||||||| ||||| ||||||||||||||||||||  ||||||||||||||||
Sbjct: 123 tggtccatctgctatggtgaagtactggaatgaccctgaagttcttcaaaagattgg 179



to top

>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score =  143 bits (72), Expect = 8e-31
 Identities = 179/212 (84%), Gaps = 2/212 (0%)
 Strand = Plus / Plus

                                                                          
Query: 217    gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276
              ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 150143 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 150202

                                                                          
Query: 277    gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336
              || |||||||| ||||| ||||| || |  || |||||||||||||  ||    ||||||
Sbjct: 150203 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 150262

                                                                          
Query: 337    cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 395
              |||| |||| ||| ||||||| |||||| |||| ||||| || || || |||||||||||
Sbjct: 150263 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 150321

                                              
Query: 396    ggcggagcgtcttgggaatagtcttatgcagg 427
              ||| || ||||||||||||| |||||||||||
Sbjct: 150322 ggcagaacgtcttgggaatactcttatgcagg 150353



 Score =  133 bits (67), Expect = 7e-28
 Identities = 133/155 (85%)
 Strand = Plus / Plus

                                                                          
Query: 424    caggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcag 483
              |||||||||| ||||||||||||||| ||||  |||||||||||  |||| || |||| |
Sbjct: 150434 caggatcctggaatgtccagtatgctcgagagtttgactagtccttctcataaggagctg 150493

                                                                          
Query: 484    cttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgag 543
              ||||||||||| ||| ||||||| || || || || |||||||||   ||||||||||||
Sbjct: 150494 cttgaagagcggatgtcccgtattaaagaagatccctctttgaaggggattcttgatgag 150553

                                                 
Query: 544    atagagcgtggtggtccatctgcaatggtcaagta 578
              |||||| |||||||||||||||| ||||| |||||
Sbjct: 150554 atagagagtggtggtccatctgctatggtgaagta 150588



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 576    gtactggaatgaccctgagattcttcaaaagattgg 611
              ||||||||||||||||||  ||||||||||||||||
Sbjct: 150663 gtactggaatgaccctgaagttcttcaaaagattgg 150698



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 156    ggcagctggtgcaggccttcccagtccttttgattt 191
              |||| ||| |||||||||||||| ||||||||||||
Sbjct: 149969 ggcacctgatgcaggccttcccaatccttttgattt 150004



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  143 bits (72), Expect = 8e-31
 Identities = 179/212 (84%), Gaps = 2/212 (0%)
 Strand = Plus / Plus

                                                                            
Query: 217      gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276
                ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 19667068 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 19667127

                                                                            
Query: 277      gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336
                || |||||||| ||||| ||||| || |  || |||||||||||||  ||    ||||||
Sbjct: 19667128 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 19667187

                                                                            
Query: 337      cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 395
                |||| |||| ||| ||||||| |||||| |||| ||||| || || || |||||||||||
Sbjct: 19667188 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 19667246

                                                
Query: 396      ggcggagcgtcttgggaatagtcttatgcagg 427
                ||| || ||||||||||||| |||||||||||
Sbjct: 19667247 ggcagaacgtcttgggaatactcttatgcagg 19667278



 Score =  133 bits (67), Expect = 7e-28
 Identities = 133/155 (85%)
 Strand = Plus / Plus

                                                                            
Query: 424      caggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcag 483
                |||||||||| ||||||||||||||| ||||  |||||||||||  |||| || |||| |
Sbjct: 19667359 caggatcctggaatgtccagtatgctcgagagtttgactagtccttctcataaggagctg 19667418

                                                                            
Query: 484      cttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgag 543
                ||||||||||| ||| ||||||| || || || || |||||||||   ||||||||||||
Sbjct: 19667419 cttgaagagcggatgtcccgtattaaagaagatccctctttgaaggggattcttgatgag 19667478

                                                   
Query: 544      atagagcgtggtggtccatctgcaatggtcaagta 578
                |||||| |||||||||||||||| ||||| |||||
Sbjct: 19667479 atagagagtggtggtccatctgctatggtgaagta 19667513



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 576      gtactggaatgaccctgagattcttcaaaagattgg 611
                ||||||||||||||||||  ||||||||||||||||
Sbjct: 19667588 gtactggaatgaccctgaagttcttcaaaagattgg 19667623



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 156      ggcagctggtgcaggccttcccagtccttttgattt 191
                |||| ||| |||||||||||||| ||||||||||||
Sbjct: 19666894 ggcacctgatgcaggccttcccaatccttttgattt 19666929



to top

>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450E05
          Length = 176553

 Score =  143 bits (72), Expect = 8e-31
 Identities = 179/212 (84%), Gaps = 2/212 (0%)
 Strand = Plus / Plus

                                                                         
Query: 217   gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 276
             ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 12754 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 12813

                                                                         
Query: 277   gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 336
             || |||||||| ||||| ||||| || |  || |||||||||||||  ||    ||||||
Sbjct: 12814 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 12873

                                                                         
Query: 337   cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 395
             |||| |||| ||| ||||||| |||||| |||| ||||| || || || |||||||||||
Sbjct: 12874 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 12932

                                             
Query: 396   ggcggagcgtcttgggaatagtcttatgcagg 427
             ||| || ||||||||||||| |||||||||||
Sbjct: 12933 ggcagaacgtcttgggaatactcttatgcagg 12964



 Score =  133 bits (67), Expect = 7e-28
 Identities = 133/155 (85%)
 Strand = Plus / Plus

                                                                         
Query: 424   caggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcag 483
             |||||||||| ||||||||||||||| ||||  |||||||||||  |||| || |||| |
Sbjct: 13045 caggatcctggaatgtccagtatgctcgagagtttgactagtccttctcataaggagctg 13104

                                                                         
Query: 484   cttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgag 543
             ||||||||||| ||| ||||||| || || || || |||||||||   ||||||||||||
Sbjct: 13105 cttgaagagcggatgtcccgtattaaagaagatccctctttgaaggggattcttgatgag 13164

                                                
Query: 544   atagagcgtggtggtccatctgcaatggtcaagta 578
             |||||| |||||||||||||||| ||||| |||||
Sbjct: 13165 atagagagtggtggtccatctgctatggtgaagta 13199



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 576   gtactggaatgaccctgagattcttcaaaagattgg 611
             ||||||||||||||||||  ||||||||||||||||
Sbjct: 13274 gtactggaatgaccctgaagttcttcaaaagattgg 13309



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 156   ggcagctggtgcaggccttcccagtccttttgattt 191
             |||| ||| |||||||||||||| ||||||||||||
Sbjct: 12580 ggcacctgatgcaggccttcccaatccttttgattt 12615



to top

>gb|AY107283.1| Zea mays PCO076711 mRNA sequence
          Length = 1604

 Score =  139 bits (70), Expect = 1e-29
 Identities = 181/218 (83%)
 Strand = Plus / Plus

                                                                       
Query: 394 atggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttgag 453
           ||||| |||||||| ||||||  |||||||||||||||||| |||||||||||||| || 
Sbjct: 604 atggcagagcgtctggggaatgctcttatgcaggatcctgctatgtccagtatgctggaa 663

                                                                       
Query: 454 aacttgactagtccagctcacaaagagcagcttgaagagcgaatgacccgtatcaaggat 513
           | ||| | ||||||| | || || |||||||| |||||||| ||| | || || ||||| 
Sbjct: 664 acctttagtagtccatcacataaggagcagctggaagagcgtatgtctcgcattaaggaa 723

                                                                       
Query: 514 gacccgtctttgaagccaattcttgatgagatagagcgtggtggtccatctgcaatggtc 573
           || ||  || ||||| |||||||||||||| |||||  ||| || || ||||||||| | 
Sbjct: 724 gatccagctatgaagtcaattcttgatgagttagagaatgggggcccttctgcaatgatg 783

                                                 
Query: 574 aagtactggaatgaccctgagattcttcaaaagattgg 611
           ||||||||||| |||||||| | |||||||||||||||
Sbjct: 784 aagtactggaacgaccctgatactcttcaaaagattgg 821



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                       
Query: 208 ttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgtattc 267
           |||||||||||||||||||| | ||||||||| || |||||||| || || |||| ||||
Sbjct: 418 ttgctcaatgatccatctattaaggagatggcagatcaaattgcaagggatcctgcattc 477

                                                                
Query: 268 aaccagatggctgagcagcttcagaaaagtgcgcagggtacaggggaacaggg 320
           |||| ||||||||||||||| |||| |||||| ||  | ||||| ||||||||
Sbjct: 478 aaccggatggctgagcagctacagagaagtgctcaaagcacaggagaacaggg 530



to top

>gb|AY107157.1| Zea mays PCO066038 mRNA sequence
          Length = 776

 Score =  119 bits (60), Expect = 1e-23
 Identities = 123/144 (85%)
 Strand = Plus / Plus

                                                                       
Query: 427 gatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagctt 486
           |||||||| |||||||| ||||||||||||||||| | ||  ||||| || ||| |||||
Sbjct: 306 gatcctgctatgtccagaatgcttgagaacttgaccattctggctcataaggagtagctt 365

                                                                       
Query: 487 gaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgagata 546
           || ||| | ||| |||||||||||||||| || || ||||||||||||||||||||||||
Sbjct: 366 gaggagaggatggcccgtatcaaggatgatccatccttgaagccaattcttgatgagata 425

                                   
Query: 547 gagcgtggtggtccatctgcaatg 570
           ||   |||  ||||||||||||||
Sbjct: 426 gataatgggcgtccatctgcaatg 449



 Score =  103 bits (52), Expect = 7e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                       
Query: 220 ccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatggct 279
           ||||| ||||| |||||||||||||||||||| || |||||||| ||||||||||||| |
Sbjct: 200 ccatcaataagagagatggctgagcaaattgcaagtgaccctgtgttcaaccagatggtt 259

                               
Query: 280 gagcagcttcagaaaagtgc 299
           || |||||||||||||||||
Sbjct: 260 gaacagcttcagaaaagtgc 279



to top

>gb|DQ123971.1| Coffea arabica x Coffea canephora clone HT-SSH1-G01 mRNA sequence
          Length = 515

 Score =  113 bits (57), Expect = 7e-22
 Identities = 153/185 (82%)
 Strand = Plus / Plus

                                                                       
Query: 365 aagttatgcagaatccgcagttcatgtcaatggcggagcgtcttgggaatagtcttatgc 424
           |||||||||| ||||| || || ||| ||||||| ||||| ||||| |||  | | ||||
Sbjct: 46  aagttatgcaaaatccacaatttatgacaatggctgagcggcttggcaatgctttaatgc 105

                                                                       
Query: 425 aggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagc 484
           |||||||  | |||||| | ||||||||||| ||||| | ||||| ||||||||| ||||
Sbjct: 106 aggatccatctatgtccggcatgcttgagaatttgaccaatccagttcacaaagaccagc 165

                                                                       
Query: 485 ttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgaga 544
           ||||||| |||||| | || |||||||| || || ||||||||||| ||| | |||||||
Sbjct: 166 ttgaagaacgaatgtcacgcatcaaggaggatccttctttgaagcctattttggatgaga 225

                
Query: 545 tagag 549
           |||||
Sbjct: 226 tagag 230



to top

>ref|XM_483562.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1306

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 392 caatggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttg 451
           ||||||| |||||||||||| ||  |||| || |||||||||||||||||||| |||| |
Sbjct: 370 caatggcagagcgtcttggggatgctcttgtgaaggatcctgcaatgtccagtctgctgg 429

                            
Query: 452 agaacttgactagtcca 468
           | |||||||||||||||
Sbjct: 430 aaaacttgactagtcca 446



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 204 cagcttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgt 263
           |||||||||||||||||||||| ||| |||||| || || || ||||| |  ||||||| 
Sbjct: 197 cagcttgctcaatgatccatctgtaaaggagatagcagatcagattgcaaaggaccctgc 256

                                 
Query: 264 attcaaccagatggctgagcag 285
            |||| ||||||||| ||||||
Sbjct: 257 gttcacccagatggcggagcag 278



to top

>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full
           insert sequence
          Length = 1292

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Plus

                                                                       
Query: 392 caatggcggagcgtcttgggaatagtcttatgcaggatcctgcaatgtccagtatgcttg 451
           ||||||| |||||||||||| ||  |||| || |||||||||||||||||||| |||| |
Sbjct: 370 caatggcagagcgtcttggggatgctcttgtgaaggatcctgcaatgtccagtctgctgg 429

                            
Query: 452 agaacttgactagtcca 468
           | |||||||||||||||
Sbjct: 430 aaaacttgactagtcca 446



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 204 cagcttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgt 263
           |||||||||||||||||||||| ||| |||||| || || || ||||| |  ||||||| 
Sbjct: 197 cagcttgctcaatgatccatctgtaaaggagatagcagatcagattgcaaaggaccctgc 256

                                 
Query: 264 attcaaccagatggctgagcag 285
            |||| ||||||||| ||||||
Sbjct: 257 gttcacccagatggcggagcag 278



to top

>gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein mRNA, complete cds
          Length = 1065

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 160/202 (79%)
 Strand = Plus / Plus

                                                                       
Query: 365 aagttatgcagaatccgcagttcatgtcaatggcggagcgtcttgggaatagtcttatgc 424
           |||||||||| ||||| || || ||| | ||||| ||||||||||| |||    | ||||
Sbjct: 329 aagttatgcaaaatcctcaatttatgactatggctgagcgtcttggtaatgcattaatgc 388

                                                                       
Query: 425 aggatcctgcaatgtccagtatgcttgagaacttgactagtccagctcacaaagagcagc 484
           |||||||  | |||||||| ||||||||||| ||| ||| |||| | ||||| || ||||
Sbjct: 389 aggatccatctatgtccagcatgcttgagaatttggctaatccaacacacaaggaccagc 448

                                                                       
Query: 485 ttgaagagcgaatgacccgtatcaaggatgacccgtctttgaagccaattcttgatgaga 544
           |||||||  ||||| | || || || || || || || |||||||| ||| | |||||||
Sbjct: 449 ttgaagaaagaatggcacgcattaaagaagatccatcattgaagcctattttagatgaga 508

                                 
Query: 545 tagagcgtggtggtccatctgc 566
           ||||   |||||||||| ||||
Sbjct: 509 tagaaactggtggtccagctgc 530



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 259 cctgtattcaaccagatggctgagcagct 287
           |||| ||||||||||||||| ||||||||
Sbjct: 220 cctgcattcaaccagatggcagagcagct 248



to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 425      aggatcctgcaatgtccagtatgcttgagaacttgactagtcca 468
                |||||||||||||||||||| |||| || |||||||||||||||
Sbjct: 26976910 aggatcctgcaatgtccagtctgctggaaaacttgactagtcca 26976953



to top

>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 425   aggatcctgcaatgtccagtatgcttgagaacttgactagtcca 468
             |||||||||||||||||||| |||| || |||||||||||||||
Sbjct: 78310 aggatcctgcaatgtccagtctgctggaaaacttgactagtcca 78353



to top

>gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, complete sequence
          Length = 136875

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 356   ccatgacaaaagttatgcagaat 378
             |||||||||||||||||||||||
Sbjct: 36420 ccatgacaaaagttatgcagaat 36442



to top

>gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complete sequence
          Length = 220878

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 356   ccatgacaaaagttatgcagaat 378
             |||||||||||||||||||||||
Sbjct: 34041 ccatgacaaaagttatgcagaat 34063



to top

>gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (TIP3) mRNA,
           complete cds
          Length = 1047

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 271 cagatggctgagcagcttcagaa 293
           |||||||||||||||||||||||
Sbjct: 241 cagatggctgagcagcttcagaa 263



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 421 atgcaggatcctgcaatgtccagtatgcttgagaacttgac 461
           |||||||||||  | |||||||| ||||||||||| |||||
Sbjct: 394 atgcaggatccatctatgtccagcatgcttgagaatttgac 434



to top

>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA,
           complete cds
          Length = 1050

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 271 cagatggctgagcagcttcagaa 293
           |||||||||||||||||||||||
Sbjct: 244 cagatggctgagcagcttcagaa 266



to top

>emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-repeat protein
          Length = 700

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 259 cctgtattcaaccagatggctgagcagcttcagaa 293
           |||| ||||||||||||||| |||||||| |||||
Sbjct: 424 cctgcattcaaccagatggcagagcagctccagaa 458



to top

>gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence
          Length = 1379

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 256 gaccctgtattcaaccagatggctgagcagcttcagaa 293
           ||||||| ||| || |||||||| ||||||||||||||
Sbjct: 325 gaccctgcatttaatcagatggcagagcagcttcagaa 362



to top

>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete
             sequence
          Length = 196911

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 312   ggaacagggtgttccaagttt 332
             |||||||||||||||||||||
Sbjct: 66839 ggaacagggtgttccaagttt 66819



to top

>ref|XM_765535.1| Giardia lamblia ATCC 50803 condensin subunit (GLP_159_9285_14015)
            partial mRNA
          Length = 4731

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 544  atagagcgtggtggtccatctgcaa 568
            ||||||| |||||||||||||||||
Sbjct: 1876 atagagcttggtggtccatctgcaa 1852



to top

>gb|BT021194.1| Bos taurus G protein-coupled receptor 61 (GPR61), mRNA, complete cds
          Length = 2626

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 38   accactgctgccttccctccc 58
            |||||||||||||||||||||
Sbjct: 1369 accactgctgccttccctccc 1349



to top

>ref|NM_001038571.1| Bos taurus G protein-coupled receptor 61 (GPR61), mRNA
          Length = 2607

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 38   accactgctgccttccctccc 58
            |||||||||||||||||||||
Sbjct: 1369 accactgctgccttccctccc 1349



to top

>ref|NM_179168.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2);
           protein binding AT4G35450 (AKR2) transcript variant
           AT4G35450.4 mRNA, complete cds
          Length = 1377

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 540 tggtggtccttctgccatgatgaagtactggaatga 575



to top

>ref|NM_179166.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2);
           protein binding AT4G35450 (AKR2) transcript variant
           AT4G35450.2 mRNA, complete cds
          Length = 1522

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 685 tggtggtccttctgccatgatgaagtactggaatga 720



to top

>ref|NM_179167.1| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2);
           protein binding AT4G35450 (AKR2) transcript variant
           AT4G35450.3 mRNA, complete cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 605 tggtggtccttctgccatgatgaagtactggaatga 640



to top

>ref|NM_119710.3| Arabidopsis thaliana AKR2 (ANKYRIN REPEAT-CONTAINING PROTEIN 2);
           protein binding AT4G35450 (AKR2) transcript variant
           AT4G35450.1 mRNA, complete cds
          Length = 1513

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 676 tggtggtccttctgccatgatgaagtactggaatga 711



to top

>ref|NM_127294.3| Arabidopsis thaliana protein binding / transcription regulator
           AT2G17390 mRNA, complete cds
          Length = 1427

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 619 tggtggtccttctgctatgatgaagtactggaatga 654



to top

>ref|XM_476131.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 969

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  cgccgcttcaccgcttcacc 40
           ||||||||||||||||||||
Sbjct: 613 cgccgcttcaccgcttcacc 632



to top

>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 39   ccactgctgccttccctccc 58
            ||||||||||||||||||||
Sbjct: 2229 ccactgctgccttccctccc 2210



to top

>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence
          Length = 176410

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   tctataagggagatggctgagcaa 246
             ||||||||| ||||||||||||||
Sbjct: 91830 tctataaggaagatggctgagcaa 91807



to top

>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cgccgcttcaccgcttcacc 40
             ||||||||||||||||||||
Sbjct: 35912 cgccgcttcaccgcttcacc 35931



to top

>gb|AC140418.3| Mus musculus BAC clone RP24-418D12 from chromosome 5, complete sequence
          Length = 129709

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 521   ctttgaagccaattcttgatgaga 544
             ||||||||||||||||| ||||||
Sbjct: 44807 ctttgaagccaattcttaatgaga 44784



to top

>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence
          Length = 217404

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    aggggaacagggtgttccaa 328
              ||||||||||||||||||||
Sbjct: 113088 aggggaacagggtgttccaa 113107



to top

>emb|CR956386.6| Pig DNA sequence from clone CH242-152A8 on chromosome 17, complete
              sequence
          Length = 197576

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    tctttgaagccaattcttga 539
              ||||||||||||||||||||
Sbjct: 176056 tctttgaagccaattcttga 176037



to top

>emb|AL136988.17| Human DNA sequence from clone RP5-956O18 on chromosome 1q41-42.1
             Contains the 3' end of the GALNT2 gene for
             UDP-N-acetyl-alpha-D-galactosamine:polypeptide
             N-acetylgalactosaminyltransferase 2 (GalNAc-T2) and two
             novel genes, complete sequence
          Length = 73454

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gcttcaccactgctgccttc 52
             ||||||||||||||||||||
Sbjct: 16994 gcttcaccactgctgccttc 16975



to top

>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence
          Length = 213739

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    gccttcccagtccttttgatttct 193
              |||||| |||||||||||||||||
Sbjct: 103343 gccttctcagtccttttgatttct 103320



to top

>gb|AY142547.1| Arabidopsis thaliana clone RAFL08-16-B13 (R11303) mRNA sequence
          Length = 1683

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 859 tggtggtccttctgctatgatgaagtactggaatga 894



to top

>emb|CR392356.5| Mouse DNA sequence from clone RP23-329D21 on chromosome 11 Contains a
             novel gene, the 5' end of the Dock2 gene for dedicator of
             cyto-kinesis 2 and a CpG island, complete sequence
          Length = 90351

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    ccactgctgccttccctccc 58
             ||||||||||||||||||||
Sbjct: 54497 ccactgctgccttccctccc 54478



to top

>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence
          Length = 198202

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   gccttcccagtccttttgatttct 193
             |||||| |||||||||||||||||
Sbjct: 58434 gccttctcagtccttttgatttct 58411



to top

>gb|AY081477.1| Arabidopsis thaliana ankyrin repeat-containing protein 2
           (At4g35450) mRNA, complete cds
          Length = 1100

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 510 tggtggtccttctgccatgatgaagtactggaatga 545



to top

>gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, complete sequence
          Length = 69570

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ctgagcagcttcagaaaagt 297
             ||||||||||||||||||||
Sbjct: 64256 ctgagcagcttcagaaaagt 64237



to top

>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence
          Length = 201397

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 170    gccttcccagtccttttgatttct 193
              |||||| |||||||||||||||||
Sbjct: 105141 gccttctcagtccttttgatttct 105164



to top

>gb|BT024730.1| Arabidopsis thaliana At2g17390 mRNA, complete cds
          Length = 1035

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 522 tggtggtccttctgctatgatgaagtactggaatga 557



to top

>emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, complete sequence
          Length = 230610

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 448    cttgagaacttgactagtccagct 471
              ||||||||||| ||||||||||||
Sbjct: 216418 cttgagaactttactagtccagct 216395



to top

>gb|AF386982.1|AF386982 Arabidopsis thaliana ankyrin repeat-containing protein 2 (F15J1.20)
           mRNA, complete cds
          Length = 1389

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 685 tggtggtccttctgccatgatgaagtactggaatga 720



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 21      cgccgcttcaccgcttcacc 40
               ||||||||||||||||||||
Sbjct: 6664750 cgccgcttcaccgcttcacc 6664769



to top

>emb|BX819895.1|CNS0A8GO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS44ZF02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1415

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 619 tggtggtccttctgctatgatgaagtactggaatga 654



to top

>emb|BX826711.1|CNS0A38X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB56ZH12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1333

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 560 tggtggtccttctgccatgatgaagtactggaatga 595



to top

>gb|AC007463.3| Homo sapiens BAC clone RP11-244L12 from 2, complete sequence
          Length = 166892

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gaaggttcaaaatcagaggg 152
             ||||||||||||||||||||
Sbjct: 80119 gaaggttcaaaatcagaggg 80138



to top

>gb|AY087377.1| Arabidopsis thaliana clone 34698 mRNA, complete sequence
          Length = 1344

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 640 tggtggtccttctgccatgatgaagtactggaatga 675



to top

>gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8, complete sequence
          Length = 117406

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 170    gccttcccagtccttttgatttct 193
              |||||| |||||||||||||||||
Sbjct: 100642 gccttctcagtccttttgatttct 100665



to top

>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete
             sequence
          Length = 177152

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   gccttcccagtccttttgatttct 193
             |||||| |||||||||||||||||
Sbjct: 40875 gccttctcagtccttttgatttct 40852



to top

>gb|U70425.1|ATU70425 Arabidopsis thaliana ankyrin repeat-containing protein 2 (AKR2)
           mRNA, complete cds
          Length = 1598

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 766 tggtggtccttctgccatgatgaagtactggaatga 801



to top

>dbj|AP000711.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-51K10, complete
             sequence
          Length = 111591

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    cttcaccactgctgccttccctcc 57
             ||||| ||||||||||||||||||
Sbjct: 82684 cttcatcactgctgccttccctcc 82707



to top

>dbj|AP001554.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-35P15, complete
             sequence
          Length = 171747

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 34    cttcaccactgctgccttccctcc 57
             ||||| ||||||||||||||||||
Sbjct: 35397 cttcatcactgctgccttccctcc 35420



to top

>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence
          Length = 169072

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 521   ctttgaagccaattcttgatgaga 544
             ||||||||||||||||| ||||||
Sbjct: 54518 ctttgaagccaattcttaatgaga 54541



to top

>gb|AF034387.1|AF034387 Arabidopsis thaliana AFT protein (AFT) mRNA, complete cds
          Length = 1315

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 552 tggtggtccatctgcaatggtcaagtactggaatga 587
           ||||||||| ||||| ||| | ||||||||||||||
Sbjct: 589 tggtggtccttctgccatgatgaagtactggaatga 624



to top

>gb|AY870248.1| Acanthopagrus schlegelii steroidogenic acute regulatory protein
           mRNA, partial cds
          Length = 600

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 593 agattcttcaaaagattggc 612
           ||||||||||||||||||||
Sbjct: 455 agattcttcaaaagattggc 474



to top

>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete
            sequence
          Length = 136540

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 148  gaggggttggcagctggtgc 167
            ||||||||||||||||||||
Sbjct: 3060 gaggggttggcagctggtgc 3041


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,918,034
Number of Sequences: 3902068
Number of extensions: 4918034
Number of successful extensions: 88435
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88201
Number of HSP's gapped (non-prelim): 223
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top