ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63h12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GPV_HUMAN (P40197) Platelet glycoprotein V precursor (GPV) (CD42... 30 4.4
2ZYGBL_PONPY (Q5RAG3) Zyg-11 protein homolog (Zyg-11 homolog B-like) 29 7.5
3ZYGBL_HUMAN (Q7Z7L7) Zyg-11 protein homolog (Zyg-11 homolog B-like) 29 7.5

>GPV_HUMAN (P40197) Platelet glycoprotein V precursor (GPV) (CD42D antigen)|
          Length = 560

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +2

Query: 119 IRFFRRHGTACAPPTVPKISAALGASISTSWNLCLP---FYRLPFCFLLSFIYYRLAELP 289
           ++F R H  + AP    ++      ++S +    LP   F       LL+     LAELP
Sbjct: 223 LQFHRNHIRSIAPGAFDRLPNLSSLTLSRNHLAFLPSALFLHSHNLTLLTLFENPLAELP 282

Query: 290 GLHWGRNGGLE 322
           G+ +G  GGL+
Sbjct: 283 GVLFGEMGGLQ 293



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>ZYGBL_PONPY (Q5RAG3) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 766

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +3

Query: 264 FTTVWQSYLDSIGGGMEVWSIRAAQHLALLLPLS*EAWVLCRPRRRRASHEFQTRAPKW 440
           F +V+ + L+S   G+EV S  A   L+ ++    EAW +C P+R             W
Sbjct: 613 FISVFSNLLESKADGIEV-SYNACGVLSHIMFDGPEAWGVCEPQREEVEERMWAAIQSW 670



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>ZYGBL_HUMAN (Q7Z7L7) Zyg-11 protein homolog (Zyg-11 homolog B-like)|
          Length = 766

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +3

Query: 264 FTTVWQSYLDSIGGGMEVWSIRAAQHLALLLPLS*EAWVLCRPRRRRASHEFQTRAPKW 440
           F +V+ + L+S   G+EV S  A   L+ ++    EAW +C P+R             W
Sbjct: 613 FISVFSNLLESKADGIEV-SYNACGVLSHIMFDGPEAWGVCEPQREEVEERMWAAIQSW 670


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,699,567
Number of Sequences: 219361
Number of extensions: 1398051
Number of successful extensions: 3569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3567
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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