ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63g15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_189108.2| Oryza sativa (japonica cultivar-group), mRNA 305 7e-80
2ref|XM_507141.1| PREDICTED Oryza sativa (japonica cultivar-group... 305 7e-80
3dbj|AK070227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 7e-80
4dbj|AK060121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 7e-80
5gb|AY106565.1| Zea mays PCO096548 mRNA sequence 176 4e-41
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
8dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
9emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m... 103 5e-19
10dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone... 84 5e-13
11ref|NM_121723.3| Arabidopsis thaliana electron transporter/ meta... 66 1e-07
12gb|BT000984.1| Arabidopsis thaliana clone U09484 unknown protein... 66 1e-07
13gb|AY035119.1| Arabidopsis thaliana unknown protein (At5g17170) ... 66 1e-07
14emb|BX831408.1|CNS0A09X Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
15emb|BX830489.1|CNS0A065 Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
16emb|BX829838.1|CNS09ZY3 Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
17dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 56 1e-04
18gb|AC151928.2| Phaeodactylum tricornutum clone JGIAHOK-9H10, com... 44 0.42
19ref|NM_104894.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 42 1.6
20gb|AC183679.3| Pan troglodytes BAC clone CH251-400O3 from chromo... 42 1.6
21emb|AL589882.10| Human DNA sequence from clone RP11-368F13 on ch... 42 1.6
22dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.6
23gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complet... 42 1.6
24gb|AC000375.1|F19K23 Sequence of BAC F19K23 from Arabidopsis tha... 42 1.6
25ref|NM_196522.1| Oryza sativa (japonica cultivar-group) contains... 40 6.5
26gb|AY392153.1| Schistosoma bovis nicotinic acetylcholine recepto... 40 6.5
27emb|AL358215.16| Human DNA sequence from clone RP11-470L19 on ch... 40 6.5
28gb|AC009780.12| Homo sapiens 12 BAC RP11-1C11 (Roswell Park Canc... 40 6.5
29dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.5
30ref|XM_685950.1| PREDICTED: Danio rerio similar to slit homolog ... 40 6.5
31gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome... 40 6.5
32gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.5
33dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
35gb|AE004827.1| Pseudomonas aeruginosa PAO1, section 388 of 529 o... 40 6.5
36gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 40 6.5
37dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
38ref|NM_211573.1| Eremothecium gossypii AGL156Wp (AGL156W), mRNA 40 6.5
39gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete... 40 6.5
40gb|AC121108.12| Mus musculus chromosome 3, clone RP24-417H10, co... 40 6.5
41emb|BX537305.32| Zebrafish DNA sequence from clone DKEY-45L12, c... 40 6.5
42gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5

>ref|NM_189108.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 934

 Score =  305 bits (154), Expect = 7e-80
 Identities = 235/262 (89%)
 Strand = Plus / Plus

                                                                       
Query: 210 gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
           ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 212 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 271

                                                                       
Query: 270 cagaagtccggcggcggcgtcgtcatcaccggtgtggagtccggagggaatgcagcaaga 329
           |||||| |||||||||||||||||||||||| |||||| || |||||||| || ||||||
Sbjct: 272 cagaagaccggcggcggcgtcgtcatcaccgctgtggattctggagggaacgcggcaaga 331

                                                                       
Query: 330 gcagggctcaagtcgggtgaccaagtgctctacacaagcagcttcttcggtgatgagttg 389
           ||||| || || || |||||||| |||||||||||||| |||||||| || |||||  | 
Sbjct: 332 gcaggcctgaaatcaggtgaccaggtgctctacacaagtagcttctttggagatgaacta 391

                                                                       
Query: 390 tggccggcagacaagctgggattcaccaagacagccatccaagcaaagccagactctgta 449
           ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 392 tggcctgcagataagctggggttcaccaagacagccatccaggcaaagccagactctgtc 451

                                 
Query: 450 tactttgtagtaagcaggggtg 471
           |||||||| || ||||||||||
Sbjct: 452 tactttgtggttagcaggggtg 473



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>ref|XM_507141.1| PREDICTED Oryza sativa (japonica cultivar-group), P0577B11.138 mRNA
          Length = 1003

 Score =  305 bits (154), Expect = 7e-80
 Identities = 235/262 (89%)
 Strand = Plus / Plus

                                                                       
Query: 210 gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
           ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 242 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 301

                                                                       
Query: 270 cagaagtccggcggcggcgtcgtcatcaccggtgtggagtccggagggaatgcagcaaga 329
           |||||| |||||||||||||||||||||||| |||||| || |||||||| || ||||||
Sbjct: 302 cagaagaccggcggcggcgtcgtcatcaccgctgtggattctggagggaacgcggcaaga 361

                                                                       
Query: 330 gcagggctcaagtcgggtgaccaagtgctctacacaagcagcttcttcggtgatgagttg 389
           ||||| || || || |||||||| |||||||||||||| |||||||| || |||||  | 
Sbjct: 362 gcaggcctgaaatcaggtgaccaggtgctctacacaagtagcttctttggagatgaacta 421

                                                                       
Query: 390 tggccggcagacaagctgggattcaccaagacagccatccaagcaaagccagactctgta 449
           ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 422 tggcctgcagataagctggggttcaccaagacagccatccaggcaaagccagactctgtc 481

                                 
Query: 450 tactttgtagtaagcaggggtg 471
           |||||||| || ||||||||||
Sbjct: 482 tactttgtggttagcaggggtg 503



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>dbj|AK070227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B21, full
           insert sequence
          Length = 934

 Score =  305 bits (154), Expect = 7e-80
 Identities = 235/262 (89%)
 Strand = Plus / Plus

                                                                       
Query: 210 gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
           ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 212 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 271

                                                                       
Query: 270 cagaagtccggcggcggcgtcgtcatcaccggtgtggagtccggagggaatgcagcaaga 329
           |||||| |||||||||||||||||||||||| |||||| || |||||||| || ||||||
Sbjct: 272 cagaagaccggcggcggcgtcgtcatcaccgctgtggattctggagggaacgcggcaaga 331

                                                                       
Query: 330 gcagggctcaagtcgggtgaccaagtgctctacacaagcagcttcttcggtgatgagttg 389
           ||||| || || || |||||||| |||||||||||||| |||||||| || |||||  | 
Sbjct: 332 gcaggcctgaaatcaggtgaccaggtgctctacacaagtagcttctttggagatgaacta 391

                                                                       
Query: 390 tggccggcagacaagctgggattcaccaagacagccatccaagcaaagccagactctgta 449
           ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 392 tggcctgcagataagctggggttcaccaagacagccatccaggcaaagccagactctgtc 451

                                 
Query: 450 tactttgtagtaagcaggggtg 471
           |||||||| || ||||||||||
Sbjct: 452 tactttgtggttagcaggggtg 473



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>dbj|AK060121.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F09, full
           insert sequence
          Length = 1003

 Score =  305 bits (154), Expect = 7e-80
 Identities = 235/262 (89%)
 Strand = Plus / Plus

                                                                       
Query: 210 gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
           ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 242 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 301

                                                                       
Query: 270 cagaagtccggcggcggcgtcgtcatcaccggtgtggagtccggagggaatgcagcaaga 329
           |||||| |||||||||||||||||||||||| |||||| || |||||||| || ||||||
Sbjct: 302 cagaagaccggcggcggcgtcgtcatcaccgctgtggattctggagggaacgcggcaaga 361

                                                                       
Query: 330 gcagggctcaagtcgggtgaccaagtgctctacacaagcagcttcttcggtgatgagttg 389
           ||||| || || || |||||||| |||||||||||||| |||||||| || |||||  | 
Sbjct: 362 gcaggcctgaaatcaggtgaccaggtgctctacacaagtagcttctttggagatgaacta 421

                                                                       
Query: 390 tggccggcagacaagctgggattcaccaagacagccatccaagcaaagccagactctgta 449
           ||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||| 
Sbjct: 422 tggcctgcagataagctggggttcaccaagacagccatccaggcaaagccagactctgtc 481

                                 
Query: 450 tactttgtagtaagcaggggtg 471
           |||||||| || ||||||||||
Sbjct: 482 tactttgtggttagcaggggtg 503



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>gb|AY106565.1| Zea mays PCO096548 mRNA sequence
          Length = 1026

 Score =  176 bits (89), Expect = 4e-41
 Identities = 212/253 (83%)
 Strand = Plus / Plus

                                                                       
Query: 219 gccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggccagaagtcc 278
           ||||||||||||||||||||||| || |||||||| ||| |  || | ||||||||| ||
Sbjct: 315 gccaagaacatcgaggtggaggtcgagaagccgcttggcttagccttgggccagaagccc 374

                                                                       
Query: 279 ggcggcggcgtcgtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctc 338
           || || ||||||||||||||   ||||||||| |||||||||||||| ||||| || || 
Sbjct: 375 ggtggtggcgtcgtcatcacttctgtggagtctggagggaatgcagccagagccggtctg 434

                                                                       
Query: 339 aagtcgggtgaccaagtgctctacacaagcagcttcttcggtgatgagttgtggccggca 398
           ||  | || ||||| || || |||||||||||||||||||| || ||| ||||||| || 
Sbjct: 435 aaaaccggggaccaggtcctgtacacaagcagcttcttcggagacgagctgtggcctgcg 494

                                                                       
Query: 399 gacaagctgggattcaccaagacagccatccaagcaaagccagactctgtatactttgta 458
           || ||||| || ||||||||||||||||||||||| ||| ||||||| || ||||| || 
Sbjct: 495 gataagcttgggttcaccaagacagccatccaagcgaagtcagactccgtctacttcgtc 554

                        
Query: 459 gtaagcaggggtg 471
           || ||||||||||
Sbjct: 555 gtgagcaggggtg 567



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 115 agaagactgccttccatggggt 136
           ||||||||||||||||||||||
Sbjct: 205 agaagactgccttccatggggt 226



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/166 (86%)
 Strand = Plus / Plus

                                                                           
Query: 302     tgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgaccaagtgctcta 361
               |||||| || |||||||| || ||||||||||| || || || |||||||| ||||||||
Sbjct: 3689221 tgtggattctggagggaacgcggcaagagcaggcctgaaatcaggtgaccaggtgctcta 3689280

                                                                           
Query: 362     cacaagcagcttcttcggtgatgagttgtggccggcagacaagctgggattcaccaagac 421
               |||||| |||||||| || |||||  | ||||| ||||| |||||||| |||||||||||
Sbjct: 3689281 cacaagtagcttctttggagatgaactatggcctgcagataagctggggttcaccaagac 3689340

                                                             
Query: 422     agccatccaagcaaagccagactctgtatactttgtagtaagcagg 467
               ||||||||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 3689341 agccatccaggcaaagccagactctgtctactttgtggttagcagg 3689386



 Score =  149 bits (75), Expect = 1e-32
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                           
Query: 210     gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
               ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 3688431 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 3688490

                                              
Query: 270     cagaagtccggcggcggcgtcgtcatcaccg 300
               |||||| ||||||||||||||||||||||||
Sbjct: 3688491 cagaagaccggcggcggcgtcgtcatcaccg 3688521



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>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ9990_A01
          Length = 101684

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/166 (86%)
 Strand = Plus / Plus

                                                                         
Query: 302   tgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgaccaagtgctcta 361
             |||||| || |||||||| || ||||||||||| || || || |||||||| ||||||||
Sbjct: 12718 tgtggattctggagggaacgcggcaagagcaggcctgaaatcaggtgaccaggtgctcta 12777

                                                                         
Query: 362   cacaagcagcttcttcggtgatgagttgtggccggcagacaagctgggattcaccaagac 421
             |||||| |||||||| || |||||  | ||||| ||||| |||||||| |||||||||||
Sbjct: 12778 cacaagtagcttctttggagatgaactatggcctgcagataagctggggttcaccaagac 12837

                                                           
Query: 422   agccatccaagcaaagccagactctgtatactttgtagtaagcagg 467
             ||||||||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 12838 agccatccaggcaaagccagactctgtctactttgtggttagcagg 12883



 Score =  149 bits (75), Expect = 1e-32
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                         
Query: 210   gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
             ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 11928 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 11987

                                            
Query: 270   cagaagtccggcggcggcgtcgtcatcaccg 300
             |||||| ||||||||||||||||||||||||
Sbjct: 11988 cagaagaccggcggcggcgtcgtcatcaccg 12018



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>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0577B11
          Length = 180355

 Score =  155 bits (78), Expect = 2e-34
 Identities = 144/166 (86%)
 Strand = Plus / Plus

                                                                          
Query: 302    tgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgaccaagtgctcta 361
              |||||| || |||||||| || ||||||||||| || || || |||||||| ||||||||
Sbjct: 167727 tgtggattctggagggaacgcggcaagagcaggcctgaaatcaggtgaccaggtgctcta 167786

                                                                          
Query: 362    cacaagcagcttcttcggtgatgagttgtggccggcagacaagctgggattcaccaagac 421
              |||||| |||||||| || |||||  | ||||| ||||| |||||||| |||||||||||
Sbjct: 167787 cacaagtagcttctttggagatgaactatggcctgcagataagctggggttcaccaagac 167846

                                                            
Query: 422    agccatccaagcaaagccagactctgtatactttgtagtaagcagg 467
              ||||||||| ||||||||||||||||| |||||||| || ||||||
Sbjct: 167847 agccatccaggcaaagccagactctgtctactttgtggttagcagg 167892



 Score =  149 bits (75), Expect = 1e-32
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                          
Query: 210    gccggcgcggccaagaacatcgaggtggaggtagacaagccgctcggcctcacccttggc 269
              ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 166937 gccggcgcggcgaagaacatcgaggtggaggtcgacaagccgctcggcctcaccctcggc 166996

                                             
Query: 270    cagaagtccggcggcggcgtcgtcatcaccg 300
              |||||| ||||||||||||||||||||||||
Sbjct: 166997 cagaagaccggcggcggcgtcgtcatcaccg 167027



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>emb|CT571264.2| Medicago truncatula chromosome 5 clone mth2-146m15, COMPLETE SEQUENCE
          Length = 141614

 Score =  103 bits (52), Expect = 5e-19
 Identities = 130/156 (83%)
 Strand = Plus / Plus

                                                                         
Query: 312   ggagggaatgcagcaagagcagggctcaagtcgggtgaccaagtgctctacacaagcagc 371
             |||||||||||||||||||||||| | ||||| || |||||||| || || || ||||| 
Sbjct: 77996 ggagggaatgcagcaagagcagggttaaagtccggggaccaagttctatatactagcagt 78055

                                                                         
Query: 372   ttcttcggtgatgagttgtggccggcagacaagctgggattcaccaagacagccatccaa 431
             ||||| || ||||| || ||||| ||||| ||||| |||||||| || ||||| ||| | 
Sbjct: 78056 ttctttggagatgaattatggccagcagataagcttggattcacgaaaacagcaatcaat 78115

                                                 
Query: 432   gcaaagccagactctgtatactttgtagtaagcagg 467
             || ||||| |||||||| |||||||| || ||||||
Sbjct: 78116 gctaagcccgactctgtctactttgttgtcagcagg 78151



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>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b,
             complete sequence
          Length = 45450

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 123/150 (82%)
 Strand = Plus / Minus

                                                                         
Query: 318   aatgcagcaagagcagggctcaagtcgggtgaccaagtgctctacacaagcagcttcttc 377
             |||||||||| ||||||| | ||| | || |||||||| || || || ||||| ||||| 
Sbjct: 30036 aatgcagcaaaagcagggttaaaggcaggggaccaagtcctttatactagcagtttcttt 29977

                                                                         
Query: 378   ggtgatgagttgtggccggcagacaagctgggattcaccaagacagccatccaagcaaag 437
             || ||||| |||||||| || || ||||| || ||||| || || || |||||||| |||
Sbjct: 29976 ggggatgaattgtggcctgcggataagcttggcttcactaaaaccgcaatccaagctaag 29917

                                           
Query: 438   ccagactctgtatactttgtagtaagcagg 467
             ||||||||||| |||||||| || ||||||
Sbjct: 29916 ccagactctgtctactttgttgtcagcagg 29887



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>ref|NM_121723.3| Arabidopsis thaliana electron transporter/ metal ion binding /
           protein binding AT5G17170 mRNA, complete cds
          Length = 1131

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 144/181 (79%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgac 350
           |||||||||||||||||    |||||||| ||||||| ||||||||| || || || || 
Sbjct: 451 gtcatcaccggtgtggacggaggagggaacgcagcaaaagcagggcttaaatctggagat 510

                                                                       
Query: 351 caagtgctctacacaagcagcttcttcggtgatgagttgtggccggcagacaagctggga 410
           |||||  | ||||||||||| ||||| || |||||| | ||||| ||||| ||||| || 
Sbjct: 511 caagttgtgtacacaagcagtttctttggagatgagctttggcctgcagataagcttggc 570

                                                                       
Query: 411 ttcaccaagacagccatccaagcaaagccagactctgtatactttgtagtaagcaggggt 470
           || || || || || || || ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 571 tttactaaaactgcaattcaggcaaaacctgattctgtctactttgttgttagcagaggt 630

            
Query: 471 g 471
           |
Sbjct: 631 g 631



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>gb|BT000984.1| Arabidopsis thaliana clone U09484 unknown protein (At5g17170) mRNA,
           complete cds
          Length = 847

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 144/181 (79%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgac 350
           |||||||||||||||||    |||||||| ||||||| ||||||||| || || || || 
Sbjct: 319 gtcatcaccggtgtggacggaggagggaacgcagcaaaagcagggcttaaatctggagat 378

                                                                       
Query: 351 caagtgctctacacaagcagcttcttcggtgatgagttgtggccggcagacaagctggga 410
           |||||  | ||||||||||| ||||| || |||||| | ||||| ||||| ||||| || 
Sbjct: 379 caagttgtgtacacaagcagtttctttggagatgagctttggcctgcagataagcttggc 438

                                                                       
Query: 411 ttcaccaagacagccatccaagcaaagccagactctgtatactttgtagtaagcaggggt 470
           || || || || || || || ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 439 tttactaaaactgcaattcaggcaaaacctgattctgtctactttgttgttagcagaggt 498

            
Query: 471 g 471
           |
Sbjct: 499 g 499



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>gb|AY035119.1| Arabidopsis thaliana unknown protein (At5g17170) mRNA, complete cds
          Length = 1100

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 144/181 (79%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgac 350
           |||||||||||||||||    |||||||| ||||||| ||||||||| || || || || 
Sbjct: 404 gtcatcaccggtgtggacggaggagggaacgcagcaaaagcagggcttaaatctggagat 463

                                                                       
Query: 351 caagtgctctacacaagcagcttcttcggtgatgagttgtggccggcagacaagctggga 410
           |||||  | ||||||||||| ||||| || |||||| | ||||| ||||| ||||| || 
Sbjct: 464 caagttgtgtacacaagcagtttctttggagatgagctttggcctgcagataagcttggc 523

                                                                       
Query: 411 ttcaccaagacagccatccaagcaaagccagactctgtatactttgtagtaagcaggggt 470
           || || || || || || || ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 524 tttactaaaactgcaattcaggcaaaacctgattctgtctactttgttgttagcagaggt 583

            
Query: 471 g 471
           |
Sbjct: 584 g 584



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>emb|BX831408.1|CNS0A09X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZA11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 817

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 144/181 (79%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgac 350
           |||||||||||||||||    |||||||| ||||||| ||||||||| || || || || 
Sbjct: 201 gtcatcaccggtgtggacggaggagggaacgcagcaaaagcagggcttaaatctggagat 260

                                                                       
Query: 351 caagtgctctacacaagcagcttcttcggtgatgagttgtggccggcagacaagctggga 410
           |||||  | ||||||||||| ||||| || |||||| | ||||| ||||| ||||| || 
Sbjct: 261 caagttgtgtacacaagcagtttctttggagatgagctttggcctgcagataagcttggc 320

                                                                       
Query: 411 ttcaccaagacagccatccaagcaaagccagactctgtatactttgtagtaagcaggggt 470
           || || || || || || || ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 321 tttactaaaactgcaattcaggcaaaacctgattctgtctactttgttgttagcagaggt 380

            
Query: 471 g 471
           |
Sbjct: 381 g 381



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>emb|BX830489.1|CNS0A065 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB85ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 976

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 144/181 (79%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgac 350
           |||||||||||||||||    |||||||| ||||||| ||||||||| || || || || 
Sbjct: 372 gtcatcaccggtgtggacggaggagggaacgcagcaaaagcagggcttaaatctggagat 431

                                                                       
Query: 351 caagtgctctacacaagcagcttcttcggtgatgagttgtggccggcagacaagctggga 410
           |||||  | ||||||||||| ||||| || |||||| | ||||| ||||| ||||| || 
Sbjct: 432 caagttgtgtacacaagcagtttctttggagatgagctttggcctgcagataagcttggc 491

                                                                       
Query: 411 ttcaccaagacagccatccaagcaaagccagactctgtatactttgtagtaagcaggggt 470
           || || || || || || || ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 492 tttactaaaactgcaattcaggcaaaacctgattctgtctactttgttgttagcagaggt 551

            
Query: 471 g 471
           |
Sbjct: 552 g 552



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>emb|BX829838.1|CNS09ZY3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB40ZA04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 996

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 144/181 (79%)
 Strand = Plus / Plus

                                                                       
Query: 291 gtcatcaccggtgtggagtccggagggaatgcagcaagagcagggctcaagtcgggtgac 350
           |||||||||||||||||    |||||||| ||||||| ||||||||| || || || || 
Sbjct: 451 gtcatcaccggtgtggacggaggagggaacgcagcaaaagcagggcttaaatctggagat 510

                                                                       
Query: 351 caagtgctctacacaagcagcttcttcggtgatgagttgtggccggcagacaagctggga 410
           |||||  | ||||||||||| ||||| || |||||| | ||||| ||||| ||||| || 
Sbjct: 511 caagttgtgtacacaagcagtttctttggagatgagctttggcctgcagataagcttggc 570

                                                                       
Query: 411 ttcaccaagacagccatccaagcaaagccagactctgtatactttgtagtaagcaggggt 470
           || || || || || || || ||||| || || ||||| |||||||| || ||||| |||
Sbjct: 571 tttactaaaactgcaattcaggcaaaacctgattctgtctactttgttgttagcagaggt 630

            
Query: 471 g 471
           |
Sbjct: 631 g 631



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>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11
          Length = 75188

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 124/156 (79%)
 Strand = Plus / Plus

                                                                        
Query: 312  ggagggaatgcagcaagagcagggctcaagtcgggtgaccaagtgctctacacaagcagc 371
            |||||||| ||||||| ||||||||| || || || || |||||  | ||||||||||| 
Sbjct: 8891 ggagggaacgcagcaaaagcagggcttaaatctggagatcaagttgtgtacacaagcagt 8950

                                                                        
Query: 372  ttcttcggtgatgagttgtggccggcagacaagctgggattcaccaagacagccatccaa 431
            ||||| || |||||| | ||||| ||||| ||||| || || || || || || || || 
Sbjct: 8951 ttctttggagatgagctttggcctgcagataagcttggctttactaaaactgcaattcag 9010

                                                
Query: 432  gcaaagccagactctgtatactttgtagtaagcagg 467
            ||||| || || ||||| |||||||| || ||||||
Sbjct: 9011 gcaaaacctgattctgtctactttgttgttagcagg 9046



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>gb|AC151928.2| Phaeodactylum tricornutum clone JGIAHOK-9H10, complete sequence
          Length = 35591

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 275  gtccggcggcggcgtcgtcatc 296
            ||||||||||||||||||||||
Sbjct: 4402 gtccggcggcggcgtcgtcatc 4423



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>ref|NM_104894.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT1G62130 mRNA, complete cds
          Length = 3078

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 372  ttcttcggtgatgagttgtggccgg 396
            |||||||||||||||||||| ||||
Sbjct: 1330 ttcttcggtgatgagttgtgtccgg 1354



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>gb|AC183679.3| Pan troglodytes BAC clone CH251-400O3 from chromosome 10, complete
             sequence
          Length = 203130

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   atcagccaagaagactgcctt 127
             |||||||||||||||||||||
Sbjct: 18558 atcagccaagaagactgcctt 18538



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>emb|AL589882.10| Human DNA sequence from clone RP11-368F13 on chromosome 10, complete
             sequence
          Length = 69266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   atcagccaagaagactgcctt 127
             |||||||||||||||||||||
Sbjct: 54133 atcagccaagaagactgcctt 54113



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 281     cggcggcgtcgtcatcaccgg 301
               |||||||||||||||||||||
Sbjct: 2308027 cggcggcgtcgtcatcaccgg 2308007



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 386    gttgtggccggcagacaagc 405
              ||||||||||||||||||||
Sbjct: 722541 gttgtggccggcagacaagc 722560



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>gb|AC151580.2| Mus musculus BAC clone RP23-65L6 from 18, complete sequence
          Length = 236806

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     cttccttccatcctctcaaca 104
              |||||||||||||||||||||
Sbjct: 169957 cttccttccatcctctcaaca 169977



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>gb|AC000375.1|F19K23 Sequence of BAC F19K23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 97451

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 372   ttcttcggtgatgagttgtggccgg 396
             |||||||||||||||||||| ||||
Sbjct: 27874 ttcttcggtgatgagttgtgtccgg 27850



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>ref|NM_196522.1| Oryza sativa (japonica cultivar-group) contains similarity to zinc
           finger protein ID1 (OSJNBa0006I13.9), mRNA
          Length = 1230

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 278 cggcggcggcgtcgtcatcaccgg 301
           ||||||||||| ||||||||||||
Sbjct: 849 cggcggcggcggcgtcatcaccgg 872



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>gb|AY392153.1| Schistosoma bovis nicotinic acetylcholine receptor non-alpha subunit
            precursor, mRNA, complete cds
          Length = 2423

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  cggcggcggcgtcgtcatca 297
            ||||||||||||||||||||
Sbjct: 1965 cggcggcggcgtcgtcatca 1984



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>emb|AL358215.16| Human DNA sequence from clone RP11-470L19 on chromosome 1 Contains the
             3' end of the PROK1 gene for Prokineticin 1, a putatative
             novel transcript, an unprocessed pseudogene, a novel
             transcript and the LOC395116 gene for the shaker subfamily
             potassium channel KCNA10, complete sequence
          Length = 101529

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    ccacttccttccatcctctcaaca 104
             |||||| |||||||||||||||||
Sbjct: 93898 ccactttcttccatcctctcaaca 93921



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>gb|AC009780.12| Homo sapiens 12 BAC RP11-1C11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144454

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    ccacttccttccatcctctc 100
             ||||||||||||||||||||
Sbjct: 68018 ccacttccttccatcctctc 67999



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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 7       catcaccatggcggcccgctctcctccg 34
               |||||||||||| ||| |||||||||||
Sbjct: 2961520 catcaccatggctgccagctctcctccg 2961547



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>ref|XM_685950.1| PREDICTED: Danio rerio similar to slit homolog 1 (LOC562570), mRNA
          Length = 2394

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 ggtgtggagtccggagggaa 319
           ||||||||||||||||||||
Sbjct: 848 ggtgtggagtccggagggaa 829



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>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence
          Length = 188905

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    ccacttccttccatcctctc 100
             ||||||||||||||||||||
Sbjct: 50043 ccacttccttccatcctctc 50062



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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    cttggtggacagtaggtggt 159
              ||||||||||||||||||||
Sbjct: 406470 cttggtggacagtaggtggt 406451



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 278      cggcggcggcgtcgtcatcaccgg 301
                ||||||||||| ||||||||||||
Sbjct: 14226106 cggcggcggcggcgtcatcaccgg 14226083



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 278     cggcggcggcgtcgtcatcaccgg 301
               ||||||||||| ||||||||||||
Sbjct: 2835612 cggcggcggcgccgtcatcaccgg 2835589



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>gb|AE004827.1| Pseudomonas aeruginosa PAO1, section 388 of 529 of the complete genome
          Length = 11609

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   gcggcgaaggctggtgcagg 195
             ||||||||||||||||||||
Sbjct: 10589 gcggcgaaggctggtgcagg 10608



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>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10,
             complete sequence
          Length = 142737

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   cggcggcggcgtcgtcatcaccgg 301
             ||||||||||| ||||||||||||
Sbjct: 98179 cggcggcggcggcgtcatcaccgg 98156



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>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085L11
          Length = 148142

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   cggcggcggcgtcgtcatcaccgg 301
             ||||||||||| ||||||||||||
Sbjct: 79093 cggcggcggcgccgtcatcaccgg 79070



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>ref|NM_211573.1| Eremothecium gossypii AGL156Wp (AGL156W), mRNA
          Length = 2733

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  cttggtggacagtaggtggt 159
            ||||||||||||||||||||
Sbjct: 2643 cttggtggacagtaggtggt 2624



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>gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete sequence
          Length = 203072

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 448    tatactttgtagtaagcagg 467
              ||||||||||||||||||||
Sbjct: 154809 tatactttgtagtaagcagg 154790



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>gb|AC121108.12| Mus musculus chromosome 3, clone RP24-417H10, complete sequence
          Length = 184753

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    tccatcactgctccgtcgtcaggg 69
             ||||||||||||| ||||||||||
Sbjct: 87517 tccatcactgctcagtcgtcaggg 87540



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>emb|BX537305.32| Zebrafish DNA sequence from clone DKEY-45L12, complete sequence
          Length = 186856

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ggtgtggagtccggagggaa 319
             ||||||||||||||||||||
Sbjct: 19325 ggtgtggagtccggagggaa 19306



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 278      cggcggcggcgtcgtcatcaccgg 301
                ||||||||||| ||||||||||||
Sbjct: 14234348 cggcggcggcggcgtcatcaccgg 14234325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,494,922
Number of Sequences: 3902068
Number of extensions: 4494922
Number of successful extensions: 84347
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83931
Number of HSP's gapped (non-prelim): 409
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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