Clone Name | bah63g13 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK069426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020D04, full insert sequence Length = 1801 Score = 585 bits (295), Expect = e-164 Identities = 430/475 (90%) Strand = Plus / Plus Query: 98 tggtggaggaggtggtgcagccggtggtgcgcggcttcgtcaaggactgggacgccatgg 157 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 370 tggtggaggaggtggtgcagccggtggtgcgtggcttcgtcaaggactgggacgccatgg 429 Query: 158 aggacctgctcagctacgtcctctacaggaacattgggtgggagatgggggacgagggcc 217 |||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 430 aggacctgctcaactacgtcctgtacagcaacattgggtgggagattggggatgagggcc 489 Query: 218 agatcctcttcaccgagccgctcttcacgcccaaggctctccgggagcaattagtgcaac 277 ||||||||||||| |||||||||||||| |||||||| || ||||||||| | | ||||| Sbjct: 490 agatcctcttcacagagccgctcttcacacccaaggcacttcgggagcaactggcgcaac 549 Query: 278 ttatgttcgaaaaattcaacatatcaggattttatgattctgaacaggctgtcctgtccc 337 ||||||||||||||||||| | ||||| |||||||| ||||| |||||||| |||| | Sbjct: 550 ttatgttcgaaaaattcaatgtttcaggcttttatgactctgagcaggctgtattgtcac 609 Query: 338 tttatgctgttggccgcatttcgggttgtacggttgacattggacatgggaaaatagata 397 ||||||| ||||| ||||||||||| ||||| || |||||||| ||||||||||| |||| Sbjct: 610 tttatgcagttggacgcatttcgggctgtacagtggacattgggcatgggaaaatcgata 669 Query: 398 ttgctccagtttgtgaaggtgctgttcaacacgtagcatcgaagagatttgagattggag 457 |||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||| Sbjct: 670 ttgctccagtttgtgaaggtgctgttcagcacatagcatcaaagagatttgatattggag 729 Query: 458 gaactgacttgacaaacctatttgcgcaagagctaaagaagtccaacccatcagtaaaca 517 |||||||||||||||||||||||||| |||| || || || || ||| |||| ||||||| Sbjct: 730 gaactgacttgacaaacctatttgcggaagaactcaaaaaatctaactcatcggtaaaca 789 Query: 518 ttgatatctctgatgttgagaggctgaaagagcagtatgcatgctgcacagaaga 572 ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 790 ttgatatttctgatgttgagcggctgaaagagcagtatgcatgctgtgcagaaga 844
>ref|NM_185010.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1709 Score = 363 bits (183), Expect = 4e-97 Identities = 267/295 (90%) Strand = Plus / Plus Query: 98 tggtggaggaggtggtgcagccggtggtgcgcggcttcgtcaaggactgggacgccatgg 157 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 350 tggtggaggaggtggtgcagccggtggtgcgtggcttcgtcaaggactgggacgccatgg 409 Query: 158 aggacctgctcagctacgtcctctacaggaacattgggtgggagatgggggacgagggcc 217 |||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 410 aggacctgctcaactacgtcctgtacagcaacattgggtgggagattggggatgagggcc 469 Query: 218 agatcctcttcaccgagccgctcttcacgcccaaggctctccgggagcaattagtgcaac 277 ||||||||||||| |||||||||||||| |||||||| || ||||||||| | | ||||| Sbjct: 470 agatcctcttcacagagccgctcttcacacccaaggcacttcgggagcaactggcgcaac 529 Query: 278 ttatgttcgaaaaattcaacatatcaggattttatgattctgaacaggctgtcctgtccc 337 ||||||||||||||||||| | ||||| |||||||| ||||| |||||||| |||| | Sbjct: 530 ttatgttcgaaaaattcaatgtttcaggcttttatgactctgagcaggctgtattgtcac 589 Query: 338 tttatgctgttggccgcatttcgggttgtacggttgacattggacatgggaaaat 392 ||||||| ||||| ||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 590 tttatgcagttggacgcatttcgggctgtacagtggacattgggcatgggaaaat 644 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Plus Query: 457 ggaactgacttgacaaacctatttgcgcaagagctaaagaagtccaacccatcagtaaac 516 ||||||||||||||||||||||||||| |||| || || || || ||| |||| |||||| Sbjct: 646 ggaactgacttgacaaacctatttgcggaagaactcaaaaaatctaactcatcggtaaac 705 Query: 517 attgatatctctgatgttgagaggctgaaagagcagtatgcatgctgcacagaaga 572 |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 706 attgatatttctgatgttgagcggctgaaagagcagtatgcatgctgtgcagaaga 761
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 246 bits (124), Expect = 7e-62 Identities = 148/156 (94%) Strand = Plus / Plus Query: 98 tggtggaggaggtggtgcagccggtggtgcgcggcttcgtcaaggactgggacgccatgg 157 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 32140676 tggtggaggaggtggtgcagccggtggtgcgtggcttcgtcaaggactgggacgccatgg 32140735 Query: 158 aggacctgctcagctacgtcctctacaggaacattgggtgggagatgggggacgagggcc 217 |||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 32140736 aggacctgctcaactacgtcctgtacagcaacattgggtgggagattggggatgagggcc 32140795 Query: 218 agatcctcttcaccgagccgctcttcacgcccaagg 253 ||||||||||||| |||||||||||||| ||||||| Sbjct: 32140796 agatcctcttcacagagccgctcttcacacccaagg 32140831 Score = 216 bits (109), Expect = 6e-53 Identities = 164/181 (90%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 393 agatattgctccagtttgtgaaggtgctgttcaacacgtagcatcgaagagatt-tgaga 451 ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||| | Sbjct: 32143279 agatattgctccagtttgtgaaggtgctgttcagcacatagcatcaaagagattctgata 32143338 Query: 452 ttggaggaactgacttgacaaacctatttgcgcaagagctaaagaagtccaacccatcag 511 |||||||||||||||||||||||||||||||| |||| || || || || ||| |||| | Sbjct: 32143339 ttggaggaactgacttgacaaacctatttgcggaagaactcaaaaaatctaactcatcgg 32143398 Query: 512 taaacattgatatctctgatgttgagaggctgaaagagcagtatgcatgctgcacagaag 571 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 32143399 taaacattgatatttctgatgttgagcggctgaaagagcagtatgcatgctgtgcagaag 32143458 Query: 572 a 572 | Sbjct: 32143459 a 32143459 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 259 cgggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattct 318 ||||||||| | | |||||||||||||||||||||||| | ||||| |||||||| ||| Sbjct: 32141778 cgggagcaactggcgcaacttatgttcgaaaaattcaatgtttcaggcttttatgactct 32141837 Query: 319 gaacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacatt 378 || |||||||| |||| |||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 32141838 gagcaggctgtattgtcactttatgcagttggacgcatttcgggctgtacagtggacatt 32141897 Query: 379 ggacatgggaaaat 392 || ||||||||||| Sbjct: 32141898 gggcatgggaaaat 32141911
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 246 bits (124), Expect = 7e-62 Identities = 148/156 (94%) Strand = Plus / Plus Query: 98 tggtggaggaggtggtgcagccggtggtgcgcggcttcgtcaaggactgggacgccatgg 157 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141801 tggtggaggaggtggtgcagccggtggtgcgtggcttcgtcaaggactgggacgccatgg 141860 Query: 158 aggacctgctcagctacgtcctctacaggaacattgggtgggagatgggggacgagggcc 217 |||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 141861 aggacctgctcaactacgtcctgtacagcaacattgggtgggagattggggatgagggcc 141920 Query: 218 agatcctcttcaccgagccgctcttcacgcccaagg 253 ||||||||||||| |||||||||||||| ||||||| Sbjct: 141921 agatcctcttcacagagccgctcttcacacccaagg 141956 Score = 216 bits (109), Expect = 6e-53 Identities = 164/181 (90%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 393 agatattgctccagtttgtgaaggtgctgttcaacacgtagcatcgaagagatt-tgaga 451 ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||| | Sbjct: 144404 agatattgctccagtttgtgaaggtgctgttcagcacatagcatcaaagagattctgata 144463 Query: 452 ttggaggaactgacttgacaaacctatttgcgcaagagctaaagaagtccaacccatcag 511 |||||||||||||||||||||||||||||||| |||| || || || || ||| |||| | Sbjct: 144464 ttggaggaactgacttgacaaacctatttgcggaagaactcaaaaaatctaactcatcgg 144523 Query: 512 taaacattgatatctctgatgttgagaggctgaaagagcagtatgcatgctgcacagaag 571 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 144524 taaacattgatatttctgatgttgagcggctgaaagagcagtatgcatgctgtgcagaag 144583 Query: 572 a 572 | Sbjct: 144584 a 144584 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 259 cgggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattct 318 ||||||||| | | |||||||||||||||||||||||| | ||||| |||||||| ||| Sbjct: 142903 cgggagcaactggcgcaacttatgttcgaaaaattcaatgtttcaggcttttatgactct 142962 Query: 319 gaacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacatt 378 || |||||||| |||| |||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 142963 gagcaggctgtattgtcactttatgcagttggacgcatttcgggctgtacagtggacatt 143022 Query: 379 ggacatgggaaaat 392 || ||||||||||| Sbjct: 143023 gggcatgggaaaat 143036
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 246 bits (124), Expect = 7e-62 Identities = 148/156 (94%) Strand = Plus / Plus Query: 98 tggtggaggaggtggtgcagccggtggtgcgcggcttcgtcaaggactgggacgccatgg 157 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 32231188 tggtggaggaggtggtgcagccggtggtgcgtggcttcgtcaaggactgggacgccatgg 32231247 Query: 158 aggacctgctcagctacgtcctctacaggaacattgggtgggagatgggggacgagggcc 217 |||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 32231248 aggacctgctcaactacgtcctgtacagcaacattgggtgggagattggggatgagggcc 32231307 Query: 218 agatcctcttcaccgagccgctcttcacgcccaagg 253 ||||||||||||| |||||||||||||| ||||||| Sbjct: 32231308 agatcctcttcacagagccgctcttcacacccaagg 32231343 Score = 216 bits (109), Expect = 6e-53 Identities = 164/181 (90%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 393 agatattgctccagtttgtgaaggtgctgttcaacacgtagcatcgaagagatt-tgaga 451 ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| ||| | Sbjct: 32233791 agatattgctccagtttgtgaaggtgctgttcagcacatagcatcaaagagattctgata 32233850 Query: 452 ttggaggaactgacttgacaaacctatttgcgcaagagctaaagaagtccaacccatcag 511 |||||||||||||||||||||||||||||||| |||| || || || || ||| |||| | Sbjct: 32233851 ttggaggaactgacttgacaaacctatttgcggaagaactcaaaaaatctaactcatcgg 32233910 Query: 512 taaacattgatatctctgatgttgagaggctgaaagagcagtatgcatgctgcacagaag 571 ||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 32233911 taaacattgatatttctgatgttgagcggctgaaagagcagtatgcatgctgtgcagaag 32233970 Query: 572 a 572 | Sbjct: 32233971 a 32233971 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 259 cgggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattct 318 ||||||||| | | |||||||||||||||||||||||| | ||||| |||||||| ||| Sbjct: 32232290 cgggagcaactggcgcaacttatgttcgaaaaattcaatgtttcaggcttttatgactct 32232349 Query: 319 gaacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacatt 378 || |||||||| |||| |||||||| ||||| ||||||||||| ||||| || |||||| Sbjct: 32232350 gagcaggctgtattgtcactttatgcagttggacgcatttcgggctgtacagtggacatt 32232409 Query: 379 ggacatgggaaaat 392 || ||||||||||| Sbjct: 32232410 gggcatgggaaaat 32232423
>gb|AY107222.1| Zea mays PCO096729 mRNA sequence Length = 943 Score = 139 bits (70), Expect = 1e-29 Identities = 154/180 (85%), Gaps = 4/180 (2%) Strand = Plus / Plus Query: 393 agatattgctccagtttgtgaaggtgctgttcaacacgtagcatcgaagagatttgagat 452 ||||||||||||||||||||||| |||||||||||| ||| || |||||||| ||||| Sbjct: 27 agatattgctccagtttgtgaagcagctgttcaacac--agcttctaagagattagagat 84 Query: 453 tggaggaactgacttgacaaacctatttgcgcaagagctaaagaagtccaacccatcagt 512 ||| | | ||||||||||||||| ||| | || || || || || | || |||||||| Sbjct: 85 tggggtagttgacttgacaaacctcttttcacacgaactgaaaaact--aatccatcagt 142 Query: 513 aaacattgatatctctgatgttgagaggctgaaagagcagtatgcatgctgcacagaaga 572 |||| ||||| | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 143 aaaccttgatgtttctgatgttgagaggctgaaagagcagtatgcatgttgcacagaaga 202
>ref|NM_115947.2| Arabidopsis thaliana ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton AT3G60830 (ATARP7) mRNA, complete cds Length = 1761 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 535 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 594 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 595 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 654 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| |||||| ||||||||| || |||||| Sbjct: 655 gtcatgggaagatagatattgccccagttcttgaaggtgcagtacaacac 704
>gb|AY128849.1| Arabidopsis thaliana actin -like protein (At3g60830) mRNA, complete cds Length = 1165 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 311 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 370 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 371 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 430 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| |||||| ||||||||| || |||||| Sbjct: 431 gtcatgggaagatagatattgccccagttcttgaaggtgcagtacaacac 480
>gb|AF507915.1| Arabidopsis thaliana actin-related protein 7 (ARP7) mRNA, complete cds Length = 1092 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 311 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 370 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 371 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 430 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| |||||| ||||||||| || |||||| Sbjct: 431 gtcatgggaagatagatattgccccagttcttgaaggtgcagtacaacac 480
>gb|AY099661.1| Arabidopsis thaliana actin -like protein (At3g60830) mRNA, complete cds Length = 1455 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 536 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 595 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 596 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 655 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| |||||| ||||||||| || |||||| Sbjct: 656 gtcatgggaagatagatattgccccagttcttgaaggtgcagtacaacac 705
>emb|BX823344.1|CNS0A5CE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZD01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1418 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 516 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 575 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 576 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 635 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| |||||| ||||||||| || |||||| Sbjct: 636 gtcatgggaagatagatattgccccagttcttgaaggtgcagtacaacac 685
>gb|AY087739.1| Arabidopsis thaliana clone 38096 mRNA, complete sequence Length = 1429 Score = 99.6 bits (50), Expect = 1e-17 Identities = 140/170 (82%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 514 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 573 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 574 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 633 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| |||||| ||||||||| || |||||| Sbjct: 634 gtcatgggaagatagatattgccccagttcttgaaggtgcagtacaacac 683
>emb|BX824910.1|CNS0A5MM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH82ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1335 Score = 91.7 bits (46), Expect = 2e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 332 tgtccctttatgctgttggccgcatttcgggttgtacggttgacattggacatgggaaaa 391 ||||||||||||||||||| ||||| || ||||| || ||||| ||||| |||||||| | Sbjct: 488 tgtccctttatgctgttggacgcatctccggttgcactgttgatattggtcatgggaaga 547 Query: 392 tagatattgctccagtttgtgaaggtgctgttcaacac 429 |||||||||| |||||| ||||||||| || |||||| Sbjct: 548 tagatattgccccagttcttgaaggtgcagtacaacac 585
>emb|BX824746.1|CNS0A5JD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1333 Score = 91.7 bits (46), Expect = 2e-15 Identities = 139/170 (81%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 494 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 553 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 554 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgaactgttgatattg 613 Query: 380 gacatgggaaaatagatattgctccagtttgtgaaggtgctgttcaacac 429 | |||||||| ||||||||||| || ||| ||||||||| || |||||| Sbjct: 614 gtcatgggaagatagatattgccccggttcttgaaggtgcagtacaacac 663
>tpg|BK000423.1| TPA: TPA_exp: Arabidopsis thaliana actin-related protein 7 (ARP7) gene, complete cds Length = 3301 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 1529 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 1588 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 1589 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 1648 Query: 380 gacatgggaaaatagatatt 399 | |||||||| |||| |||| Sbjct: 1649 gtcatgggaagataggtatt 1668
>emb|AL162295.1|ATT4C21 Arabidopsis thaliana DNA chromosome 3, BAC clone T4C21 Length = 107865 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 260 gggagcaattagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctg 319 |||||||||| ||||| | ||||| |||| |||||| | || |||||||||| |||| Sbjct: 76068 gggagcaattggtgcagttgatgtttgaaacattcaatgtctctggattttatgcatctg 76127 Query: 320 aacaggctgtcctgtccctttatgctgttggccgcatttcgggttgtacggttgacattg 379 | || || || ||||||||||||||||||| ||||| || ||||| || ||||| |||| Sbjct: 76128 agcaagcagtgttgtccctttatgctgttggacgcatctccggttgcactgttgatattg 76187 Query: 380 gacatgggaaaatagatatt 399 | |||||||| |||| |||| Sbjct: 76188 gtcatgggaagataggtatt 76207
>gb|AC124965.18| Medicago truncatula clone mth2-7h21, complete sequence Length = 122160 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 268 ttagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctgaacaggc 326 ||||||||||||||||| |||| |||||||||||||| ||||||| || |||||||| Sbjct: 7881 ttagtgcaacttatgtttgaaacgttcaacatatcagggttttatgcctcggaacaggc 7939
>emb|CT030211.4| M.truncatula DNA sequence from clone MTH2-85A3 on chromosome 3, complete sequence Length = 78707 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 268 ttagtgcaacttatgttcgaaaaattcaacatatcaggattttatgattctgaacaggc 326 ||||||||||||||||| |||| |||||||||||||| ||||||| || |||||||| Sbjct: 60848 ttagtgcaacttatgtttgaaacgttcaacatatcagggttttatgcctcggaacaggc 60790
>gb|DQ333328.1| Hirudo medicinalis cytoplasmic actin (Act1) gene, complete cds Length = 3039 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 caggctgtcctgtccctttatgct 345 |||||||||||||||||||||||| Sbjct: 2002 caggctgtcctgtccctttatgct 2025
>emb|CR956640.5| Pig DNA sequence from clone CH242-155M9 on chromosome 17, complete sequence Length = 182043 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 42 gatgaagacggaggcggaggag 63 |||||||||||||||||||||| Sbjct: 26814 gatgaagacggaggcggaggag 26793
>emb|CR407590.7| Zebrafish DNA sequence from clone CH211-153N15 in linkage group 2, complete sequence Length = 176623 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 289 aaattcaacatatcaggattttatgattct 318 |||||||||| || |||||||||||||||| Sbjct: 40130 aaattcaacaaattaggattttatgattct 40101
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 98 tggtggaggaggtggtgcagccggtg 123 |||||||||||||||||||| ||||| Sbjct: 2919283 tggtggaggaggtggtgcaggcggtg 2919258
>gb|AF188161.2|AF188161 Halteria grandinella actin I gene, complete cds Length = 1575 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 134 tcgtcaaggactgggacgccatggag 159 |||||||||||||||||| ||||||| Sbjct: 369 tcgtcaaggactgggacgacatggag 394
>gb|AF508048.1| Halteria grandinella macronuclear actin I gene, complete cds Length = 1575 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 134 tcgtcaaggactgggacgccatggag 159 |||||||||||||||||| ||||||| Sbjct: 369 tcgtcaaggactgggacgacatggag 394
>gb|U65940.1|SSU65940 Streptomyces sp. cyt P-450-9-deoxo-FK506 hydroxylase (fkbD) and 31-O-demethyl-FK506 methyltransferase (fkbM) genes, complete cds Length = 2500 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 5 gctgcccgaccggcgcccgggctggt 30 ||||||||||||||| |||||||||| Sbjct: 399 gctgcccgaccggcgtccgggctggt 424
>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence Length = 224638 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 483 gcaagagctaaagaagtccaaccca 507 |||||||||||||| |||||||||| Sbjct: 126574 gcaagagctaaagaggtccaaccca 126598
>gb|AF508050.1| Oxytricha longa macronuclear actin I gene, complete cds Length = 1348 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 tcgtcaaggactgggacgccatgga 158 |||||||||||||||||| |||||| Sbjct: 349 tcgtcaaggactgggacgacatgga 373
>dbj|AB105196.1| Mus musculus IRSp53 gene for insulin receptor tyrosine kinase substrate protein p53, insulin receptor substrate p53, complete cds, alternative splicing Length = 64709 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 cagtttgtgaaggtgctgttc 424 ||||||||||||||||||||| Sbjct: 47047 cagtttgtgaaggtgctgttc 47067
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 532 gttgagaggctgaaagagcag 552 ||||||||||||||||||||| Sbjct: 79988 gttgagaggctgaaagagcag 80008
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccgggctggtgatgccctcga 41 ||||||||||||||||||||| Sbjct: 945944 ccgggctggtgatgccctcga 945924
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 attgatatctctgatgttga 536 |||||||||||||||||||| Sbjct: 880828 attgatatctctgatgttga 880847
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 gcgcgctgcccgaccggcgcccgg 24 ||||||||| |||||||||||||| Sbjct: 2389306 gcgcgctgctcgaccggcgcccgg 2389283
>gb|BC058346.1| Mus musculus zinc finger protein 523, mRNA (cDNA clone MGC:66570 IMAGE:6832233), complete cds Length = 2461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 1181 cggaggagagcgagcaggcc 1200
>ref|XM_322581.1| Neurospora crassa OR74A predicted protein (NCU00496.1) partial mRNA Length = 1839 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gaggtggtgcagccggtggt 125 |||||||||||||||||||| Sbjct: 419 gaggtggtgcagccggtggt 438
>ref|XM_950694.1| Neurospora crassa OR74A hypothetical protein (NCU00496.1) partial mRNA Length = 1839 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gaggtggtgcagccggtggt 125 |||||||||||||||||||| Sbjct: 419 gaggtggtgcagccggtggt 438
>gb|DQ304716.1| Bradyrhizobium sp. UPM1167 hydrogenase gene cluster, complete sequence Length = 16590 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gagggccagatcctcttcac 230 |||||||||||||||||||| Sbjct: 14839 gagggccagatcctcttcac 14858
>gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160802 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 acattggacatgggaaaata 393 |||||||||||||||||||| Sbjct: 101784 acattggacatgggaaaata 101803
>gb|AC126937.3| Mus musculus BAC clone RP24-250G8 from chromosome 17, complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 109779 cggaggagagcgagcaggcc 109798
>gb|BC025615.1| Mus musculus zinc finger protein 523, mRNA (cDNA clone IMAGE:5253417), containing frame-shift errors Length = 2965 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 1688 cggaggagagcgagcaggcc 1707
>gb|BC060611.1| Mus musculus zinc finger protein 523, mRNA (cDNA clone MGC:79196 IMAGE:6416823), complete cds Length = 3378 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 2087 cggaggagagcgagcaggcc 2106
>gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, complete sequence Length = 178957 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 acatatcaggattttatgattctg 319 |||| ||||||||||||||||||| Sbjct: 169200 acatctcaggattttatgattctg 169223
>gb|AF246288.1| Musa acuminata actin (Mh-Act1) mRNA, complete cds Length = 1458 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 caggctgtcctgtccctttatgct 345 ||||||||||| |||||||||||| Sbjct: 507 caggctgtcctctccctttatgct 530
>emb|CT025652.7| Mouse DNA sequence from clone RP24-68J3 on chromosome 17, complete sequence Length = 226856 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 160777 cggaggagagcgagcaggcc 160758
>emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AWN gene, AQN-1 gene, PSP-II gene, PSP-I gene, AQN-3 gene and C10ORF120 gene Length = 270148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cattgggtgggagatggggg 208 |||||||||||||||||||| Sbjct: 61617 cattgggtgggagatggggg 61598
>ref|XM_445312.1| Candida glabrata CBS138, CAGL0C03113g partial mRNA Length = 1080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 tccagtttgtgaaggtgctg 421 |||||||||||||||||||| Sbjct: 74 tccagtttgtgaaggtgctg 93
>gb|AC146218.2| Pan troglodytes BAC clone CH251-267E2 from Y, complete sequence Length = 203014 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 acatatcaggattttatgattctg 319 |||| ||||||||||||||||||| Sbjct: 202597 acatctcaggattttatgattctg 202574
>gb|AC151740.21| Medicago truncatula clone mth2-82n16, complete sequence Length = 131700 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 gagatgaagacggaggcggaggag 63 |||||||||||| ||||||||||| Sbjct: 49819 gagatgaagacgaaggcggaggag 49796
>emb|Z97832.11|HS329A5 Human DNA sequence from clone RP3-329A5 on chromosome 6p21.1-21.33 Contains the gene for a novel EGF-like and CUB domain protein similar to mouse CUB domain EGF-like signal peptide 1 (Scube1) and mouse and human CEGP1, the ZNF76 gene for zinc finger protein 76 (expressed in testis), the DEF6 gene for differentially expressed in FDCP 6 homolog (mouse), a ribosomal protein L35A (RPL35A) pseudogene and three CpG islands, complete sequence Length = 117026 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 83851 cggaggagagcgagcaggcc 83870
>emb|BX255892.3| Human DNA sequence from clone CTD-2176C4 on chromosome X, complete sequence Length = 11737 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 tttgtgaaggtgctgttcaa 426 |||||||||||||||||||| Sbjct: 1201 tttgtgaaggtgctgttcaa 1182
>emb|AL662886.6| Human DNA sequence from clone RP13-339K12 on chromosome X Contains a pseudogene similar to part of p30 (nuclear protein p30) and a CpG island, complete sequence Length = 63451 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 tttgtgaaggtgctgttcaa 426 |||||||||||||||||||| Sbjct: 800 tttgtgaaggtgctgttcaa 819
>emb|CR380949.1| Candida glabrata strain CBS138 chromosome C complete sequence Length = 558804 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 tccagtttgtgaaggtgctg 421 |||||||||||||||||||| Sbjct: 305093 tccagtttgtgaaggtgctg 305112
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 tgaagacggaggcggaggagagcg 67 |||||||||||||| ||||||||| Sbjct: 186825 tgaagacggaggcgcaggagagcg 186802
>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3, complete sequence Length = 182196 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 atgggaaaatagatattgct 402 |||||||||||||||||||| Sbjct: 159795 atgggaaaatagatattgct 159814
>emb|CR381654.7| Zebrafish DNA sequence from clone DKEY-30K9 in linkage group 5, complete sequence Length = 75485 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tggtggaggaggtggtgcag 117 |||||||||||||||||||| Sbjct: 69520 tggtggaggaggtggtgcag 69539
>emb|AL935035.6| Zebrafish DNA sequence from clone CH211-180B22 in linkage group 20 Contains the 5' end of the gene for a novel protein similar to vertebrate meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6), the gene for a novel protein similar to vertebrate melanoma inhibitory activity 2 (MIA2), the gene for a novel protein similar to mouse and human TATA box binding protein (TBP)-associated factor RNA polymerase I A 48kDa (TAF1A), the 3' end of the gene for a novel protein similar to vertebrate dual specificity phosphatase 10 (DUSP10) and four CpG islands, complete sequence Length = 151114 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 40 gagatgaagacggaggcggaggagagcgagca 71 |||||||||||||| ||||||||| |||||| Sbjct: 52903 gagatgaagacggatacggaggagatcgagca 52872
>gb|AF250786.1| Buellia erubescens internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 503 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 cgaccggcgcccgggctggt 30 |||||||||||||||||||| Sbjct: 98 cgaccggcgcccgggctggt 79
>dbj|BS000660.1| Pan troglodytes chromosome Y clone:PTBY-005M17, complete sequences Length = 93004 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 acatatcaggattttatgattctg 319 |||| ||||||||||||||||||| Sbjct: 73963 acatctcaggattttatgattctg 73986
>dbj|BS000535.1| Pan troglodytes chromosome Y clone:PTB-096E06, complete sequences Length = 198405 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 acatatcaggattttatgattctg 319 |||| ||||||||||||||||||| Sbjct: 191917 acatctcaggattttatgattctg 191894
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 296 acatatcaggattttatgattctg 319 |||| ||||||||||||||||||| Sbjct: 19478186 acatctcaggattttatgattctg 19478163
>ref|XM_690328.1| PREDICTED: Danio rerio similar to CTAGE family, member 5 isoform 2 (LOC567041), mRNA Length = 3897 Score = 40.1 bits (20), Expect = 7.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 40 gagatgaagacggaggcggaggagagcgagca 71 |||||||||||||| ||||||||| |||||| Sbjct: 1516 gagatgaagacggatacggaggagatcgagca 1547
>gb|AC160822.2| Xenopus tropicalis clone ISB1-100A23, complete sequence Length = 19404 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 atcaggattttatgattctg 319 |||||||||||||||||||| Sbjct: 16606 atcaggattttatgattctg 16625
>dbj|AK028222.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810027J07 product:similar to ZINC FINGER PROTEIN 76 [Homo sapiens], full insert sequence Length = 2710 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 1450 cggaggagagcgagcaggcc 1469
>gb|DQ350688.1| Ajellomyces capsulatus nitrosative stress induced transcription 38 (NIT38) gene, partial sequence Length = 2591 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 gatgggggacgagggccaga 220 |||||||||||||||||||| Sbjct: 165 gatgggggacgagggccaga 146
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 caattagtgcaacttatgtt 284 |||||||||||||||||||| Sbjct: 40132675 caattagtgcaacttatgtt 40132694
>gb|AY206862.1| Zea mays lycopene beta-cyclase (PS1) gene, complete cds Length = 2276 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gatgaagacggaggcggagg 61 |||||||||||||||||||| Sbjct: 850 gatgaagacggaggcggagg 831
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 caattagtgcaacttatgtt 284 |||||||||||||||||||| Sbjct: 75759 caattagtgcaacttatgtt 75778
>ref|XM_342102.2| PREDICTED: Rattus norvegicus zinc finger protein 523 (predicted) (Zfp523_predicted), mRNA Length = 2526 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 1266 cggaggagagcgagcaggcc 1285
>emb|AL512582.7| Mouse DNA sequence from clone RP23-290H11 on chromosome 2, complete sequence Length = 115075 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 aagtccaacccatcagtaaacatt 519 |||||||||||||| ||||||||| Sbjct: 82513 aagtccaacccatctgtaaacatt 82536
>dbj|AK109978.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-D04, full insert sequence Length = 3707 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 ggtgcgcggcttcgtcaagg 142 |||||||||||||||||||| Sbjct: 1839 ggtgcgcggcttcgtcaagg 1858
>gb|DQ333330.1| Hirudo medicinalis cytoplasmic actin (Act3) gene, complete cds Length = 3138 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 caggctgtcctgtccctttatgct 345 ||||||||||| |||||||||||| Sbjct: 2289 caggctgtcctctccctttatgct 2312
>gb|AC007229.1|AC007229 Homo sapiens chromosome 19, cosmid R34187, complete sequence Length = 43127 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 193 gggtgggagatgggggacgagggc 216 ||||| |||||||||||||||||| Sbjct: 19654 gggtgagagatgggggacgagggc 19677
>gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.746_E_8, complete sequence Length = 184886 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gacattggacatgggaaaat 392 |||||||||||||||||||| Sbjct: 49494 gacattggacatgggaaaat 49513
>emb|CT009658.7| Mouse DNA sequence from clone CH29-505N5 on chromosome 17, complete sequence Length = 190153 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 30956 cggaggagagcgagcaggcc 30937
>gb|AC087854.11| Homo sapiens chromosome 8, clone RP11-382J24, complete sequence Length = 157419 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 500 ccaacccatcagtaaacatt 519 |||||||||||||||||||| Sbjct: 115113 ccaacccatcagtaaacatt 115132
>ref|NM_172617.1| Mus musculus zinc finger protein 523 (Zfp523), mRNA Length = 2710 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 1450 cggaggagagcgagcaggcc 1469
>gb|M91592.1|HUMZINC Human zinc-finger protein (ZNF76) gene, partial cds Length = 2457 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cggaggagagcgagcaggcc 75 |||||||||||||||||||| Sbjct: 1284 cggaggagagcgagcaggcc 1303
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 attgatatctctgatgttga 536 |||||||||||||||||||| Sbjct: 878704 attgatatctctgatgttga 878723
>emb|AL591586.8| Mouse DNA sequence from clone RP23-126L18 on chromosome 2, complete sequence Length = 187043 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctggtgatgccctcgagatg 45 |||||||||||||||||||| Sbjct: 43207 ctggtgatgccctcgagatg 43188
>dbj|AB022041.1| Musa acuminata mRNA for actin, partial cds Length = 516 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 322 caggctgtcctgtccctttatgct 345 ||||||||||| |||||||||||| Sbjct: 61 caggctgtcctctccctttatgct 84 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,678,986 Number of Sequences: 3902068 Number of extensions: 4678986 Number of successful extensions: 95854 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95463 Number of HSP's gapped (non-prelim): 387 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)