Clone Name | bah63g07 |
---|---|
Clone Library Name | barley_pub |
>gb|BT018674.1| Zea mays clone EL01N0510E08.d mRNA sequence Length = 1769 Score = 323 bits (163), Expect = 4e-85 Identities = 334/391 (85%) Strand = Plus / Plus Query: 225 tctgatattccagattatctaaagcatgcggagtcaaggttgcaagaagaacacgatagg 284 |||||||||||||| || || ||||||| ||||| ||||||||||||||||| || ||| Sbjct: 2 tctgatattccagactacctgaagcatgtagagtcgaggttgcaagaagaacatgaaagg 61 Query: 285 tgcattctgtatttggaagctaacacgaggaagccacttatagcaactacagaaaaacaa 344 ||| |||||||||||||||||||||||||||||||||| || |||||||| |||| |||| Sbjct: 62 tgctttctgtatttggaagctaacacgaggaagccactgatcgcaactactgaaacacaa 121 Query: 345 ttgctacagcgacacacatccgcaattattgagaagggatttacagttcttatggaagca 404 |||||| | || || ||||| ||||||||||||||||| || || | || ||||| ||| Sbjct: 122 ttgctagaccgtcatacatctgcaattattgagaaggggttcgcaatgctcatggatgca 181 Query: 405 aatcgtgtaacggacctgtcaaggatgtacacactttttcagagggttgatgccattgag 464 |||||| ||| ||||| | |||||||||| ||||| ||||||||| |||| ||||| Sbjct: 182 aatcgtataaatgacctcttgaggatgtacaaccttttccagagggttaatgctgttgag 241 Query: 465 atgctaaagcaagcacttagtttatatatccgaggcacaggccagggcattatcatggat 524 ||||||| ||||||||||||| ||||||||| | |||||||| |||||||| |||||| Sbjct: 242 ctgctaaaacaagcacttagttcatatatccgggctacaggccatggcattattatggat 301 Query: 525 gaagagaaagacaaagatctggttccctttcttctggaatttaaagcatcccttgacaaa 584 ||||| || |||| ||| | ||||| |||||||| || ||||| |||||||| |||||| Sbjct: 302 gaagaaaaggacagagagttagttccatttcttcttgattttaaggcatccctcgacaaa 361 Query: 585 atattggaagaaagttttgccaaaaatgagg 615 |||||||||||||||||||| |||||||||| Sbjct: 362 atattggaagaaagttttgctaaaaatgagg 392
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 295 bits (149), Expect = 9e-77 Identities = 215/237 (90%) Strand = Plus / Plus Query: 379 agggatttacagttcttatggaagcaaatcgtgtaacggacctgtcaaggatgtacacac 438 ||||||| ||| | |||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 23444 agggattcacaatgcttatggaagcaaatcgtgtaaaagacctctcgaggatgtacacac 23503 Query: 439 tttttcagagggttgatgccattgagatgctaaagcaagcacttagtttatatatccgag 498 | || ||||||||||||||||||||| ||||||||||||||||||||| |||||| || | Sbjct: 23504 tcttccagagggttgatgccattgagttgctaaagcaagcacttagttcatatattcggg 23563 Query: 499 gcacaggccagggcattatcatggatgaagagaaagacaaagatctggttccctttcttc 558 ||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||| Sbjct: 23564 gcacaggccagggcattatcatggatgaagaaaaggacaaagaactggtgccctttcttc 23623 Query: 559 tggaatttaaagcatcccttgacaaaatattggaagaaagttttgccaaaaatgagg 615 |||||||||| ||||| ||||| | ||||||||| |||||||||||||||||||||| Sbjct: 23624 tggaatttaaggcatcgcttgatagaatattggaggaaagttttgccaaaaatgagg 23680 Score = 228 bits (115), Expect = 2e-56 Identities = 166/183 (90%) Strand = Plus / Plus Query: 75 aggcttggtgaagcaatagataagacattgcttagtcatcttctgaagatgtttactgat 134 |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| | Sbjct: 22847 aggcttggtgaagcaatagacaggacattacttagtcatcttctgaagatgtttactgct 22906 Query: 135 cttggaatgtattccgagacattcgaaaagccctttcttgaatgcacctctgagttttat 194 |||||||||||||| |||| || |||||||||||||| || || || ||||| |||||| Sbjct: 22907 cttggaatgtattctgagagttttgaaaagccctttctggagtgtacatctgaattttat 22966 Query: 195 gctactgaaggtgtcaaatatttgcagcagtctgatattccagattatctaaagcatgcg 254 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 22967 gctactgaaggtgttaaatatttgcagcagtctgatattccagactatctcaagcatgtg 23026 Query: 255 gag 257 ||| Sbjct: 23027 gag 23029 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 259 caaggttgcaagaagaacacgataggtgcattctgtatttggaagctaacacgaggaagc 318 ||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 23126 caaggttgcaagaagaacatgaaaggtgtattctatatttggaagctaacactaggaagc 23185 Query: 319 cacttatagcaactacagaaaaacaattgctacagcgacacacatccgcaattattgaga 378 | |||||| || |||||||||| ||||| | ||||| |||||||| |||||| |||||| Sbjct: 23186 cgcttataacagctacagaaaagcaattattgcagcggcacacatctgcaattcttgaga 23245 Query: 379 agg 381 ||| Sbjct: 23246 agg 23248 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 15 tgtctccggngnattgaacacaaaaccgtcactggtcttttaagattgattgagagcgag 74 ||||||||| | |||||||||||||| || ||||||||| ||||||| |||||||| ||| Sbjct: 22365 tgtctccggag-attgaacacaaaactgttactggtcttctaagattaattgagagtgag 22423 Query: 75 agg 77 ||| Sbjct: 22424 agg 22426
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 295 bits (149), Expect = 9e-77 Identities = 215/237 (90%) Strand = Plus / Plus Query: 379 agggatttacagttcttatggaagcaaatcgtgtaacggacctgtcaaggatgtacacac 438 ||||||| ||| | |||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 32371316 agggattcacaatgcttatggaagcaaatcgtgtaaaagacctctcgaggatgtacacac 32371375 Query: 439 tttttcagagggttgatgccattgagatgctaaagcaagcacttagtttatatatccgag 498 | || ||||||||||||||||||||| ||||||||||||||||||||| |||||| || | Sbjct: 32371376 tcttccagagggttgatgccattgagttgctaaagcaagcacttagttcatatattcggg 32371435 Query: 499 gcacaggccagggcattatcatggatgaagagaaagacaaagatctggttccctttcttc 558 ||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||| Sbjct: 32371436 gcacaggccagggcattatcatggatgaagaaaaggacaaagaactggtgccctttcttc 32371495 Query: 559 tggaatttaaagcatcccttgacaaaatattggaagaaagttttgccaaaaatgagg 615 |||||||||| ||||| ||||| | ||||||||| |||||||||||||||||||||| Sbjct: 32371496 tggaatttaaggcatcgcttgatagaatattggaggaaagttttgccaaaaatgagg 32371552 Score = 228 bits (115), Expect = 2e-56 Identities = 166/183 (90%) Strand = Plus / Plus Query: 75 aggcttggtgaagcaatagataagacattgcttagtcatcttctgaagatgtttactgat 134 |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| | Sbjct: 32370719 aggcttggtgaagcaatagacaggacattacttagtcatcttctgaagatgtttactgct 32370778 Query: 135 cttggaatgtattccgagacattcgaaaagccctttcttgaatgcacctctgagttttat 194 |||||||||||||| |||| || |||||||||||||| || || || ||||| |||||| Sbjct: 32370779 cttggaatgtattctgagagttttgaaaagccctttctggagtgtacatctgaattttat 32370838 Query: 195 gctactgaaggtgtcaaatatttgcagcagtctgatattccagattatctaaagcatgcg 254 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 32370839 gctactgaaggtgttaaatatttgcagcagtctgatattccagactatctcaagcatgtg 32370898 Query: 255 gag 257 ||| Sbjct: 32370899 gag 32370901 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 259 caaggttgcaagaagaacacgataggtgcattctgtatttggaagctaacacgaggaagc 318 ||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 32370998 caaggttgcaagaagaacatgaaaggtgtattctatatttggaagctaacactaggaagc 32371057 Query: 319 cacttatagcaactacagaaaaacaattgctacagcgacacacatccgcaattattgaga 378 | |||||| || |||||||||| ||||| | ||||| |||||||| |||||| |||||| Sbjct: 32371058 cgcttataacagctacagaaaagcaattattgcagcggcacacatctgcaattcttgaga 32371117 Query: 379 agg 381 ||| Sbjct: 32371118 agg 32371120 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 15 tgtctccggngnattgaacacaaaaccgtcactggtcttttaagattgattgagagcgag 74 ||||||||| | |||||||||||||| || ||||||||| ||||||| |||||||| ||| Sbjct: 32370237 tgtctccggag-attgaacacaaaactgttactggtcttctaagattaattgagagtgag 32370295 Query: 75 agg 77 ||| Sbjct: 32370296 agg 32370298
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 295 bits (149), Expect = 9e-77 Identities = 215/237 (90%) Strand = Plus / Plus Query: 379 agggatttacagttcttatggaagcaaatcgtgtaacggacctgtcaaggatgtacacac 438 ||||||| ||| | |||||||||||||||||||||| ||||| || ||||||||||||| Sbjct: 32461826 agggattcacaatgcttatggaagcaaatcgtgtaaaagacctctcgaggatgtacacac 32461885 Query: 439 tttttcagagggttgatgccattgagatgctaaagcaagcacttagtttatatatccgag 498 | || ||||||||||||||||||||| ||||||||||||||||||||| |||||| || | Sbjct: 32461886 tcttccagagggttgatgccattgagttgctaaagcaagcacttagttcatatattcggg 32461945 Query: 499 gcacaggccagggcattatcatggatgaagagaaagacaaagatctggttccctttcttc 558 ||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||| Sbjct: 32461946 gcacaggccagggcattatcatggatgaagaaaaggacaaagaactggtgccctttcttc 32462005 Query: 559 tggaatttaaagcatcccttgacaaaatattggaagaaagttttgccaaaaatgagg 615 |||||||||| ||||| ||||| | ||||||||| |||||||||||||||||||||| Sbjct: 32462006 tggaatttaaggcatcgcttgatagaatattggaggaaagttttgccaaaaatgagg 32462062 Score = 228 bits (115), Expect = 2e-56 Identities = 166/183 (90%) Strand = Plus / Plus Query: 75 aggcttggtgaagcaatagataagacattgcttagtcatcttctgaagatgtttactgat 134 |||||||||||||||||||| | |||||| |||||||||||||||||||||||||||| | Sbjct: 32461229 aggcttggtgaagcaatagacaggacattacttagtcatcttctgaagatgtttactgct 32461288 Query: 135 cttggaatgtattccgagacattcgaaaagccctttcttgaatgcacctctgagttttat 194 |||||||||||||| |||| || |||||||||||||| || || || ||||| |||||| Sbjct: 32461289 cttggaatgtattctgagagttttgaaaagccctttctggagtgtacatctgaattttat 32461348 Query: 195 gctactgaaggtgtcaaatatttgcagcagtctgatattccagattatctaaagcatgcg 254 |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 32461349 gctactgaaggtgttaaatatttgcagcagtctgatattccagactatctcaagcatgtg 32461408 Query: 255 gag 257 ||| Sbjct: 32461409 gag 32461411 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 259 caaggttgcaagaagaacacgataggtgcattctgtatttggaagctaacacgaggaagc 318 ||||||||||||||||||| || ||||| ||||| ||||||||||||||||| ||||||| Sbjct: 32461508 caaggttgcaagaagaacatgaaaggtgtattctatatttggaagctaacactaggaagc 32461567 Query: 319 cacttatagcaactacagaaaaacaattgctacagcgacacacatccgcaattattgaga 378 | |||||| || |||||||||| ||||| | ||||| |||||||| |||||| |||||| Sbjct: 32461568 cgcttataacagctacagaaaagcaattattgcagcggcacacatctgcaattcttgaga 32461627 Query: 379 agg 381 ||| Sbjct: 32461628 agg 32461630 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/63 (88%), Gaps = 1/63 (1%) Strand = Plus / Plus Query: 15 tgtctccggngnattgaacacaaaaccgtcactggtcttttaagattgattgagagcgag 74 ||||||||| | |||||||||||||| || ||||||||| ||||||| |||||||| ||| Sbjct: 32460747 tgtctccggag-attgaacacaaaactgttactggtcttctaagattaattgagagtgag 32460805 Query: 75 agg 77 ||| Sbjct: 32460806 agg 32460808
>gb|AY105209.1| Zea mays PCO104930 mRNA sequence Length = 1490 Score = 143 bits (72), Expect = 8e-31 Identities = 129/148 (87%) Strand = Plus / Plus Query: 460 ttgagatgctaaagcaagcacttagtttatatatccgaggcacaggccagggcattatca 519 ||||| ||||||| | ||| ||||||| ||||||||| | ||||||||||||||||| | Sbjct: 17 ttgagctgctaaaactagcgcttagttcatatatccgggctacaggccagggcattatta 76 Query: 520 tggatgaagagaaagacaaagatctggttccctttcttctggaatttaaagcatcccttg 579 |||||||||| || |||| ||| ||||||| |||||||| || ||||| |||||||| | Sbjct: 77 tggatgaagaaaaggacagagaattggttccatttcttcttgattttaaggcatccctcg 136 Query: 580 acaaaatattggaagaaagttttgccaa 607 |||||||||||||||||||||||||||| Sbjct: 137 acaaaatattggaagaaagttttgccaa 164
>emb|Y16124.1|LES16124 Lycopersicon esculentum mRNA for putative cullin protein Length = 2344 Score = 105 bits (53), Expect = 2e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 159 gaaaagccctttcttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttg 218 |||||||| |||||||| | || ||||||||||||||| |||||||||||||||| || Sbjct: 602 gaaaagccatttcttgagcgtacttctgagttttatgctgctgaaggtgtcaaatacatg 661 Query: 219 cagcagtctgatattccagattatctaaagcatgcggagtcaaggttgcaagaagaacac 278 |||||||| ||| |||||||||| || ||||||| |||| |||||| || |||||||| Sbjct: 662 cagcagtcagatgttccagattacctgaagcatgtggaggtaaggttacatgaagaacat 721 Query: 279 gataggtgc 287 || |||||| Sbjct: 722 gacaggtgc 730 Score = 60.0 bits (30), Expect = 9e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 473 gcaagcacttagtttatatatccgaggcacaggccagggcattatcatggatgaagagaa 532 |||||||||||| | |||||||||| | || || ||| ||||| | | ||||||||||| Sbjct: 916 gcaagcacttagctcatatatccgaagaactggtcagagcattgtgctagatgaagagaa 975 Query: 533 agacaaagatctggttccctttcttctggaatttaaagcatcccttgacaaaatattgga 592 |||||||||| |||| ||| || |||||||||| ||||| ||||| | |||| ||| Sbjct: 976 agacaaagatatggtacccagcctcttggaatttaaggcatctcttgataccatatggga 1035 Query: 593 agaaag 598 |||||| Sbjct: 1036 agaaag 1041
>gb|AY109407.1| Zea mays CL8264_1 mRNA sequence Length = 1195 Score = 67.9 bits (34), Expect = 4e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 159 gaaaagccctttcttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttg 218 |||||||| |||||||| |||| ||||| ||| ||||||| ||| |||| |||||| | Sbjct: 557 gaaaagccttttcttgagtgcatttctgaatttgatgctacagaatgtgttaaatatata 616 Query: 219 cagcagtctgatattccagattatctaaagcatgcggagtcaaggttgcaagaa 272 || || |||||||||| ||| || || ||||||| || ||||||||||||||| Sbjct: 617 caacaatctgatattctagactacctgaagcatgtagaatcaaggttgcaagaa 670
>gb|AY724780.1| Camellia sinensis cullin mRNA, partial cds Length = 676 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 507 cagggcattatcatggatgaagagaaagacaaagatctggt 547 |||||||| |||||||||||||||||||||||||| |||| Sbjct: 490 cagggcatggtcatggatgaagagaaagacaaagatatggt 530 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 183 tctgagttttatgctactgaaggtgtcaaatatttgcagcagtctgatattccaga 238 ||||| ||||||||| | |||||||||||||| ||||||| |||||| ||||||| Sbjct: 166 tctgaattttatgctgcagaaggtgtcaaatacatgcagcaatctgatgttccaga 221
>gb|AY059387.2| Olea europaea putative cullin protein mRNA, complete cds Length = 2640 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 501 acaggccagggcattatcatggatgaagagaaagacaaagatctggt 547 ||||| |||||||| ||||||||||||| |||||||||||| |||| Sbjct: 1205 acagggcagggcatggtcatggatgaagaaaaagacaaagatatggt 1251 Score = 44.1 bits (22), Expect = 0.54 Identities = 97/122 (79%) Strand = Plus / Plus Query: 162 aagccctttcttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttgcag 221 ||||| || |||||| | || ||||| ||||||||| |||||||||||| ||| | || Sbjct: 866 aagcctttccttgaaagtacatctgaattttatgctgctgaaggtgtcagatacatacaa 925 Query: 222 cagtctgatattccagattatctaaagcatgcggagtcaaggttgcaagaagaacacgat 281 ||||| ||| |||| | ||| | || || | |||| |||||||||||||||||| ||| Sbjct: 926 cagtcggatgttccgggttacttgaaacacgtggagataaggttgcaagaagaacatgat 985 Query: 282 ag 283 || Sbjct: 986 ag 987
>ref|NM_123990.2| Arabidopsis thaliana CUL4 AT5G46210 (CUL4) mRNA, complete cds Length = 2687 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 519 atggatgaagagaaagacaaagatctggt 547 |||||||||||||||||||||||| |||| Sbjct: 1310 atggatgaagagaaagacaaagatatggt 1338 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 171 cttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttgcagcagtctgat 230 |||||| | |||||||| |||||||| ||||||| | ||||| ||||||||||||| Sbjct: 962 cttgaagggacctctgaattttatgccgctgaaggaatgaaatacatgcagcagtctgac 1021 Query: 231 attccagattatctaaagcatgcggagtcaaggttgcaagaaga 274 |||| || || || ||||||| ||| ||||||||| ||||| Sbjct: 1022 gttccggagtacctgaagcatgttgagggaaggttgcatgaaga 1065
>gb|AF067612.2| Caenorhabditis elegans cosmid F55A8, complete sequence Length = 69431 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 194 tgctactgaaggtgtcaaatatttg 218 ||||||||||||||||||||||||| Sbjct: 49987 tgctactgaaggtgtcaaatatttg 50011
>gb|AY091113.1| Arabidopsis thaliana putative cullin (At5g46210) mRNA, complete cds Length = 2678 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 519 atggatgaagagaaagacaaagatctggt 547 |||||||||||||||||||||||| |||| Sbjct: 1310 atggatgaagagaaagacaaagatatggt 1338 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 171 cttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttgcagcagtctgat 230 |||||| | |||||||| |||||||| ||||||| | ||||| ||||||||||||| Sbjct: 962 cttgaagggacctctgaattttatgccgctgaaggaatgaaatacatgcagcagtctgac 1021 Query: 231 attccagattatctaaagcatgcggagtcaaggttgcaagaaga 274 |||| || || || ||||||| ||| ||||||||| ||||| Sbjct: 1022 gttccggagtacctgaagcatgttgagggaaggttgcatgaaga 1065
>emb|AJ318018.1|ATH318018 Arabidopsis thaliana mRNA for cullin 4 (cul4 gene) Length = 2547 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 519 atggatgaagagaaagacaaagatctggt 547 |||||||||||||||||||||||| |||| Sbjct: 1174 atggatgaagagaaagacaaagatatggt 1202 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 171 cttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttgcagcagtctgat 230 |||||| | |||||||| |||||||| ||||||| | ||||| ||||||||||||| Sbjct: 826 cttgaagggacctctgaattttatgccgctgaaggaatgaaatacatgcagcagtctgac 885 Query: 231 attccagattatctaaagcatgcggagtcaaggttgcaagaaga 274 |||| || || || ||||||| ||| ||||||||| ||||| Sbjct: 886 gttccggagtacctgaagcatgttgagggaaggttgcatgaaga 929
>gb|AY084267.1| Arabidopsis thaliana clone 101723 mRNA, complete sequence Length = 2518 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 519 atggatgaagagaaagacaaagatctggt 547 |||||||||||||||||||||||| |||| Sbjct: 1174 atggatgaagagaaagacaaagatatggt 1202 Score = 40.1 bits (20), Expect = 8.4 Identities = 83/104 (79%) Strand = Plus / Plus Query: 171 cttgaatgcacctctgagttttatgctactgaaggtgtcaaatatttgcagcagtctgat 230 |||||| | |||||||| |||||||| ||||||| | ||||| ||||||||||||| Sbjct: 826 cttgaagggacctctgaattttatgccgctgaaggaatgaaatacatgcagcagtctgac 885 Query: 231 attccagattatctaaagcatgcggagtcaaggttgcaagaaga 274 |||| || || || ||||||| ||| ||||||||| ||||| Sbjct: 886 gttccggagtacctgaagcatgttgagggaaggttgcatgaaga 929
>dbj|AB025620.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDE13 Length = 14139 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 519 atggatgaagagaaagacaaagatctggt 547 |||||||||||||||||||||||| |||| Sbjct: 7647 atggatgaagagaaagacaaagatatggt 7619
>gb|AC159440.1| Trypanosoma brucei chromosome 3 clone RPCI93-2H15, complete sequence Length = 152294 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 335 agaaaaacaattgctacagcgac 357 ||||||||||||||||||||||| Sbjct: 58597 agaaaaacaattgctacagcgac 58575
>ref|NM_146549.1| Mus musculus olfactory receptor 786 (Olfr786), mRNA Length = 939 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 gatgaagagaaagacaaagatc 543 |||||||||||||||||||||| Sbjct: 93 gatgaagagaaagacaaagatc 72
>gb|AY317961.1| Mus musculus olfactory receptor Olfr786 (Olfr786) gene, complete cds Length = 939 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 gatgaagagaaagacaaagatc 543 |||||||||||||||||||||| Sbjct: 93 gatgaagagaaagacaaagatc 72
>emb|Z76735.1|HS246O8 Human DNA sequence from clone RP1-246O8 on chromosome X, complete sequence Length = 175745 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 518 catggatgaagagaaagacaaa 539 |||||||||||||||||||||| Sbjct: 36523 catggatgaagagaaagacaaa 36502
>gb|AY073548.1| Mus musculus olfactory receptor MOR111-5 gene, complete cds Length = 939 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 gatgaagagaaagacaaagatc 543 |||||||||||||||||||||| Sbjct: 93 gatgaagagaaagacaaagatc 72
>gb|AC103851.2| Homo sapiens chromosome 8, clone RP11-782K4, complete sequence Length = 111762 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 515 tatcatggatgaagagaaagacaaag 540 ||||||||| |||||||||||||||| Sbjct: 13747 tatcatggaggaagagaaagacaaag 13722
>gb|AC136214.4| Mus musculus BAC clone RP23-53G11 from chromosome 10, complete sequence Length = 203909 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 522 gatgaagagaaagacaaagatc 543 |||||||||||||||||||||| Sbjct: 151065 gatgaagagaaagacaaagatc 151044
>ref|XM_588651.2| PREDICTED: Bos taurus similar to cullin 4B (LOC539668), partial mRNA Length = 1901 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 60 ttgattgagagcgagaggcttggtgaagcaatagata 96 ||||||||||| |||||| |||||||||||| |||| Sbjct: 966 ttgattgagagggagaggaatggtgaagcaatcgata 1002
>gb|DQ158857.1| Bigelowiella natans nucleomorph chromosome 2, partial sequence Length = 134144 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 gaaaagccctttcttgaatgc 179 ||||||||||||||||||||| Sbjct: 23376 gaaaagccctttcttgaatgc 23396
>gb|AC183546.3| Pan troglodytes BAC clone CH251-245P24 from chromosome 2, complete sequence Length = 202850 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 46374 tattggaagaaagttttgcca 46354
>gb|AC130548.3| Mus musculus BAC clone RP24-456F12 from chromosome 5, complete sequence Length = 170929 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 tacagaaaaacaattgctaca 352 ||||||||||||||||||||| Sbjct: 30790 tacagaaaaacaattgctaca 30810
>gb|AC132569.3| Mus musculus BAC clone RP24-486E21 from chromosome 8, complete sequence Length = 172340 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 ctttcttctggaatttaaagc 571 ||||||||||||||||||||| Sbjct: 153107 ctttcttctggaatttaaagc 153127
>gb|AC122237.4| Mus musculus BAC clone RP23-143A15 from 8, complete sequence Length = 183867 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 ctttcttctggaatttaaagc 571 ||||||||||||||||||||| Sbjct: 137479 ctttcttctggaatttaaagc 137459
>ref|NM_006267.3| Homo sapiens RAN binding protein 2 (RANBP2), mRNA Length = 10697 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1939 tattggaagaaagttttgcca 1959
>emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chromosome 10 Contains a serine/threonine protein kinase pseudogene, complete sequence Length = 200891 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 524 tgaagagaaagacaaagatctggtt 548 |||||||||||||||||| |||||| Sbjct: 162267 tgaagagaaagacaaagacctggtt 162243
>emb|AL139809.16| Human DNA sequence from clone RP11-274M8 on chromosome Xq21.33-22.3 Contains part of the DIAPH2 gene for diaphanous (Drosophila, homolog) 2 and a CpG island, complete sequence Length = 152438 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 gaagaaagttttgccaaaaat 611 ||||||||||||||||||||| Sbjct: 31160 gaagaaagttttgccaaaaat 31140
>gb|BC037274.1| Homo sapiens cDNA clone IMAGE:4827820, containing frame-shift errors Length = 5560 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1981 tattggaagaaagttttgcca 2001
>emb|CR857960.1| Pongo pygmaeus mRNA; cDNA DKFZp469H104 (from clone DKFZp469H104) Length = 6169 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1890 tattggaagaaagttttgcca 1910
>gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromosome 2, complete sequence Length = 180877 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 63165 tattggaagaaagttttgcca 63145
>dbj|AP004611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1005_B10 Length = 142680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 gaagaaagttttgccaaaaat 611 ||||||||||||||||||||| Sbjct: 107170 gaagaaagttttgccaaaaat 107190
>emb|CR749330.1| Homo sapiens mRNA; cDNA DKFZp781D1923 (from clone DKFZp781D1923) Length = 6711 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1805 tattggaagaaagttttgcca 1825
>dbj|AK056675.1| Homo sapiens cDNA FLJ32113 fis, clone OCBBF2001687, highly similar to Homo sapiens sperm membrane protein BS-63 mRNA Length = 2188 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1207 tattggaagaaagttttgcca 1227
>gb|AC116333.2| Homo sapiens chromosome 5 clone CTD-2242E19, complete sequence Length = 112119 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 591 gaagaaagttttgccaaaaat 611 ||||||||||||||||||||| Sbjct: 44096 gaagaaagttttgccaaaaat 44076
>ref|XM_942159.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270) (LOC652620), mRNA Length = 3069 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1813 tattggaagaaagttttgcca 1833
>ref|XM_931011.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 12 (LOC653086), mRNA Length = 8292 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2706 tattggaagaaagttttgcca 2726
>ref|XM_931004.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 11 (LOC653086), mRNA Length = 6901 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1408 tattggaagaaagttttgcca 1428
>ref|XM_930995.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 10 (LOC653086), mRNA Length = 6500 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2301 tattggaagaaagttttgcca 2321
>ref|XM_930987.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 9 (LOC653086), mRNA Length = 3200 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2301 tattggaagaaagttttgcca 2321
>ref|XM_930978.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 8 (LOC653086), mRNA Length = 3015 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2301 tattggaagaaagttttgcca 2321
>ref|XM_930968.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 7 (LOC653086), mRNA Length = 6808 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1315 tattggaagaaagttttgcca 1335
>ref|XM_930956.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 5 (LOC653086), mRNA Length = 6687 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1194 tattggaagaaagttttgcca 1214
>ref|XM_930953.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 4 (LOC653086), mRNA Length = 7462 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1969 tattggaagaaagttttgcca 1989
>ref|XM_926077.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 1 (LOC653086), mRNA Length = 7794 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2301 tattggaagaaagttttgcca 2321
>ref|XM_930653.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 5 (LOC653039), mRNA Length = 3716 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2817 tattggaagaaagttttgcca 2837
>ref|XM_925789.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 1 (LOC653039), mRNA Length = 4179 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2546 tattggaagaaagttttgcca 2566
>ref|XM_930596.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 2 (LOC653039), mRNA Length = 3531 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2817 tattggaagaaagttttgcca 2837
>ref|XM_934655.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 13 (LOC653596), mRNA Length = 8292 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2706 tattggaagaaagttttgcca 2726
>ref|XM_934653.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 12 (LOC653596), mRNA Length = 6901 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1408 tattggaagaaagttttgcca 1428
>ref|XM_934651.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 11 (LOC653596), mRNA Length = 7016 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2817 tattggaagaaagttttgcca 2837
>ref|XM_934650.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 10 (LOC653596), mRNA Length = 3716 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2817 tattggaagaaagttttgcca 2837
>ref|XM_934648.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 9 (LOC653596), mRNA Length = 3531 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2817 tattggaagaaagttttgcca 2837
>ref|XM_934644.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 6 (LOC653596), mRNA Length = 6808 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1315 tattggaagaaagttttgcca 1335
>ref|XM_934642.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 5 (LOC653596), mRNA Length = 6688 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1195 tattggaagaaagttttgcca 1215
>ref|XM_930324.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 1 (LOC653596), mRNA Length = 8310 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2817 tattggaagaaagttttgcca 2837
>ref|XM_934636.1| PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 2 (LOC653596), mRNA Length = 4179 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2546 tattggaagaaagttttgcca 2566
>ref|XM_934121.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 10 (LOC653489), mRNA Length = 6691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1408 tattggaagaaagttttgcca 1428
>ref|XM_934118.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 9 (LOC653489), mRNA Length = 7138 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1822 tattggaagaaagttttgcca 1842
>ref|XM_934115.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 8 (LOC653489), mRNA Length = 7156 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1822 tattggaagaaagttttgcca 1842
>ref|XM_934113.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 7 (LOC653489), mRNA Length = 6024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1822 tattggaagaaagttttgcca 1842
>ref|XM_934110.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 6 (LOC653489), mRNA Length = 2556 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1822 tattggaagaaagttttgcca 1842
>ref|XM_934108.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 5 (LOC653489), mRNA Length = 8074 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2704 tattggaagaaagttttgcca 2724
>ref|XM_934105.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 4 (LOC653489), mRNA Length = 6479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1196 tattggaagaaagttttgcca 1216
>ref|XM_929931.1| PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 1 (LOC653489), mRNA Length = 7170 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1887 tattggaagaaagttttgcca 1907
>ref|XM_496581.2| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 1 (RGPD4), mRNA Length = 7202 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1890 tattggaagaaagttttgcca 1910
>ref|XM_935073.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 11 (RGPD4), mRNA Length = 6699 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1387 tattggaagaaagttttgcca 1407
>ref|XM_935071.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 10 (RGPD4), mRNA Length = 4955 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1198 tattggaagaaagttttgcca 1218
>ref|XM_935069.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 9 (RGPD4), mRNA Length = 4438 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1198 tattggaagaaagttttgcca 1218
>ref|XM_935067.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 8 (RGPD4), mRNA Length = 5628 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1890 tattggaagaaagttttgcca 1910
>ref|XM_935065.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 7 (RGPD4), mRNA Length = 3038 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2980 tattggaagaaagttttgcca 3000
>ref|XM_935063.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 6 (RGPD4), mRNA Length = 6066 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1890 tattggaagaaagttttgcca 1910
>ref|XM_935060.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 4 (RGPD4), mRNA Length = 6506 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1194 tattggaagaaagttttgcca 1214
>ref|XM_930491.1| PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 4, transcript variant 2 (RGPD4), mRNA Length = 7111 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1799 tattggaagaaagttttgcca 1819
>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence Length = 165158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 44298 tattggaagaaagttttgcca 44278
>gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, complete sequence Length = 162447 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 10666 tattggaagaaagttttgcca 10646
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 gaagaaagttttgccaaaaat 611 ||||||||||||||||||||| Sbjct: 18719724 gaagaaagttttgccaaaaat 18719744
>gb|AC112246.4| Homo sapiens BAC clone RP11-606M12 from 2, complete sequence Length = 72179 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 23748 tattggaagaaagttttgcca 23728
>gb|AC108938.3| Homo sapiens BAC clone RP11-701A10 from 2, complete sequence Length = 175222 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 173375 tattggaagaaagttttgcca 173355
>gb|AC111200.7| Homo sapiens BAC clone RP11-1283H4 from 2, complete sequence Length = 186752 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 141899 tattggaagaaagttttgcca 141919
>gb|AC010095.6| Homo sapiens BAC clone RP11-348G16 from 2, complete sequence Length = 179517 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 137822 tattggaagaaagttttgcca 137842
>gb|AC009963.11| Homo sapiens BAC clone RP11-368F12 from 2, complete sequence Length = 190043 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 27403 tattggaagaaagttttgcca 27423
>gb|AC013271.4| Homo sapiens BAC clone RP11-385J6 from 2, complete sequence Length = 155702 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 111846 tattggaagaaagttttgcca 111826
>gb|AC114755.4| Homo sapiens BAC clone RP11-274P16 from 2, complete sequence Length = 195403 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 177825 tattggaagaaagttttgcca 177805
>gb|AC073415.6| Homo sapiens BAC clone RP11-84C2 from 2, complete sequence Length = 214668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 69172 tattggaagaaagttttgcca 69192
>gb|AC013464.6| Homo sapiens BAC clone RP11-337D5 from UL, complete sequence Length = 195161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 39033 tattggaagaaagttttgcca 39013
>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence Length = 192494 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 138892 tattggaagaaagttttgcca 138872
>dbj|AP006233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1249E06 Length = 126534 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 591 gaagaaagttttgccaaaaat 611 ||||||||||||||||||||| Sbjct: 41241 gaagaaagttttgccaaaaat 41261
>gb|AC122733.11| Mus musculus chromosome 5, clone RP24-506B15, complete sequence Length = 157625 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 cttggtgaagcaatagataagacat 102 ||||| ||||||||||||||||||| Sbjct: 22615 cttggagaagcaatagataagacat 22639
>gb|AC099698.14| Mus musculus chromosome 5, clone RP23-415O9, complete sequence Length = 220813 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cttggtgaagcaatagataagacat 102 ||||| ||||||||||||||||||| Sbjct: 94585 cttggagaagcaatagataagacat 94561
>gb|U64675.2|HSU64675 Homo sapiens sperm membrane protein BS-63 mRNA, complete cds Length = 5475 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1893 tattggaagaaagttttgcca 1913
>emb|CR786571.6| Zebrafish DNA sequence from clone DKEY-234L24 in linkage group 4, complete sequence Length = 182259 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 ctgaaggtgtcaaatatttgcagca 223 |||||| |||||||||||||||||| Sbjct: 174067 ctgaagttgtcaaatatttgcagca 174091
>gb|AC151716.5| Mus musculus BAC clone RP23-316A23 from 5, complete sequence Length = 193466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 tacagaaaaacaattgctaca 352 ||||||||||||||||||||| Sbjct: 121379 tacagaaaaacaattgctaca 121359
>emb|BX942844.18| Zebrafish DNA sequence from clone CH211-11M18 in linkage group 20, complete sequence Length = 101954 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 330 actacagaaaaacaattgcta 350 ||||||||||||||||||||| Sbjct: 64637 actacagaaaaacaattgcta 64617
>emb|BX537861.1|HSM805964 Homo sapiens mRNA; cDNA DKFZp686P0288 (from clone DKFZp686P0288); complete cds Length = 8177 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2710 tattggaagaaagttttgcca 2730
>gb|L41840.1|HUMNUP358G Homo sapiens nucleoporin (NUP358) gene, complete cds Length = 10677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1926 tattggaagaaagttttgcca 1946
>ref|NM_005054.2| Homo sapiens RANBP2-like and GRIP domain containing 5 (RGPD5), transcript variant 1, mRNA Length = 7182 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1893 tattggaagaaagttttgcca 1913
>ref|NM_032260.2| Homo sapiens RANBP2-like and GRIP domain containing 5 (RGPD5), transcript variant 2, mRNA Length = 3325 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2349 tattggaagaaagttttgcca 2369
>ref|NM_001024457.1| Homo sapiens RANBP2-like and GRIP domain containing 2 (RGPD2), mRNA Length = 6711 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1805 tattggaagaaagttttgcca 1825
>dbj|AB209483.1| Homo sapiens mRNA for RAN binding protein 2 variant protein Length = 9802 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1555 tattggaagaaagttttgcca 1575
>emb|AL671880.15| Mouse DNA sequence from clone RP23-384C22 on chromosome X, complete sequence Length = 200535 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 78 cttggtgaagcaatagataagacat 102 ||||| ||||||||||||||||||| Sbjct: 29290 cttggagaagcaatagataagacat 29314
>emb|AL136868.1|HSM801836 Homo sapiens mRNA; cDNA DKFZp434P144 (from clone DKFZp434P144); complete cds Length = 3326 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 2350 tattggaagaaagttttgcca 2370
>dbj|D42063.1|HUMRANBP2 Human mRNA for RanBP2 (Ran-binding protein 2), complete cds Length = 10005 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 586 tattggaagaaagttttgcca 606 ||||||||||||||||||||| Sbjct: 1940 tattggaagaaagttttgcca 1960
>gb|AC122005.3| Mus musculus chromosome 5 clone RP24-340B11, complete sequence Length = 183264 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tggatgaagagaaagacaaa 539 |||||||||||||||||||| Sbjct: 11587 tggatgaagagaaagacaaa 11606
>gb|AC159273.4| Mus musculus BAC clone RP23-391G8 from chromosome 7, complete sequence Length = 227709 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 gaatttaaagcatcccttga 580 |||||||||||||||||||| Sbjct: 135070 gaatttaaagcatcccttga 135051
>gb|AC137154.2| Mus musculus BAC clone RP24-572L22 from chromosome 5, complete sequence Length = 173460 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 tggatgaagagaaagacaaa 539 |||||||||||||||||||| Sbjct: 102746 tggatgaagagaaagacaaa 102765
>ref|XM_808425.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053511671.80) partial mRNA Length = 1104 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 actttttcagagggttgatg 456 |||||||||||||||||||| Sbjct: 1056 actttttcagagggttgatg 1075
>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence Length = 152564 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 gtgtcaaatatttgcagcag 224 |||||||||||||||||||| Sbjct: 140219 gtgtcaaatatttgcagcag 140200
>ref|XM_813832.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053508831.110) partial mRNA Length = 1104 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 actttttcagagggttgatg 456 |||||||||||||||||||| Sbjct: 1056 actttttcagagggttgatg 1075
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atcatggatgaagagaaaga 535 |||||||||||||||||||| Sbjct: 362606 atcatggatgaagagaaaga 362587
>emb|AL603984.7| Mouse DNA sequence from clone RP23-137B16 on chromosome 11 Contains a novel gene, the 5' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two Cpg islands, complete sequence Length = 224602 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tggatgaagagaaagacaaa 539 |||||||||||||||||||| Sbjct: 106192 tggatgaagagaaagacaaa 106173
>gb|AC022911.6| Homo sapiens chromosome 8, clone RP11-722A15, complete sequence Length = 176063 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 577 ttgacaaaatattggaagaaagttttgccaaaaatg 612 |||||||| |||||||| ||| | |||||||||||| Sbjct: 119346 ttgacaaattattggaaaaaaatattgccaaaaatg 119381
>gb|DQ283041.1| Telmatobius sp. AMNH A165130 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 2422 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 acagaaaaacaattgctaca 352 |||||||||||||||||||| Sbjct: 2082 acagaaaaacaattgctaca 2101
>gb|AY043308.1| Ambystoma tigrinum clone AT37 olfactory receptor mRNA, complete cds Length = 2893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gcagtctgatattccagatt 240 |||||||||||||||||||| Sbjct: 1523 gcagtctgatattccagatt 1504
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ttagtcatcttctgaagatg 125 |||||||||||||||||||| Sbjct: 1985780 ttagtcatcttctgaagatg 1985799
>gb|AC115847.19| Mus musculus chromosome 5, clone RP24-245J15, complete sequence Length = 182243 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 gtgtcaaatatttgcagcag 224 |||||||||||||||||||| Sbjct: 157560 gtgtcaaatatttgcagcag 157579
>gb|AC119724.8| Homo sapiens 3 BAC RP11-674D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 148729 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 agtcatcttctgaagatgtttact 131 |||||||||||||| ||||||||| Sbjct: 134032 agtcatcttctgaaaatgtttact 134055
>gb|AC131568.5| Homo sapiens chromosome 8, clone RP11-1146N6, complete sequence Length = 150697 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gatgaagagaaagacaaaga 541 |||||||||||||||||||| Sbjct: 77985 gatgaagagaaagacaaaga 78004
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 taaagcatgcggagtcaagg 263 |||||||||||||||||||| Sbjct: 689232 taaagcatgcggagtcaagg 689213
>gb|AC009306.5| Homo sapiens BAC clone RP11-290K24 from 2, complete sequence Length = 176602 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 575 ccttgacaaaatattggaagaaagtttt 602 |||||||| | ||||||||||||||||| Sbjct: 81941 ccttgacagattattggaagaaagtttt 81914
>dbj|AP005715.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1181D6, complete sequence Length = 134425 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 gatgaagagaaagacaaaga 541 |||||||||||||||||||| Sbjct: 130905 gatgaagagaaagacaaaga 130924
>emb|AL935269.7| Zebrafish DNA sequence from clone DKEY-46J18, complete sequence Length = 177658 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agcaactacagaaaaacaat 345 |||||||||||||||||||| Sbjct: 52374 agcaactacagaaaaacaat 52355
>gb|AC135019.3| Mus musculus BAC clone RP23-186D15 from 10, complete sequence Length = 189457 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 cagttcttatggaagcaaat 407 |||||||||||||||||||| Sbjct: 118869 cagttcttatggaagcaaat 118888 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,159,605 Number of Sequences: 3902068 Number of extensions: 6159605 Number of successful extensions: 119965 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119572 Number of HSP's gapped (non-prelim): 392 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)