ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63f17 |
|---|---|
| Clone Library Name | barley_pub |
>NPP_HORVU (Q687E1) Nucleotide pyrophosphatase/phosphodiesterase (EC 3.-.-.-)| (Fragments) Length = 368 Score = 384 bits (987), Expect = e-107 Identities = 177/177 (100%), Positives = 177/177 (100%) Frame = +3 Query: 3 SLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDNYDIVFHIGDMPYANGYLS 182 SLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDNYDIVFHIGDMPYANGYLS Sbjct: 41 SLQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIEDLDNYDIVFHIGDMPYANGYLS 100 Query: 183 QWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENR 362 QWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENR Sbjct: 101 QWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDVKDSGGECGVPAETMYYYPAENR 160 Query: 363 ANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLG 533 ANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLG Sbjct: 161 ANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTVDRKHQPWLIFTAHRVLG 217
>PPAF_SOYBN (Q09131) Purple acid phosphatase precursor (EC 3.1.3.2)| (Manganese(II) purple acid phosphatase) Length = 464 Score = 58.9 bits (141), Expect = 8e-09 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 5/133 (3%) Frame = +3 Query: 138 VFHIGDMPYANGYLS----QWDQFTAQVAPISAKKPYMVASGNHERDW-PNTGGFFDVKD 302 V +GD+ YA+ Y + +WD + A +P++ +GNHE + P G K Sbjct: 186 VLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKP 245 Query: 303 SGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTV 482 VP Y +++ + FWY + V S + + TPQYK++E+ L V Sbjct: 246 YTHRYHVP-----YKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKV 300 Query: 483 DRKHQPWLIFTAH 521 +R PWLI H Sbjct: 301 NRTETPWLIVLMH 313
>PPAF_PHAVU (P80366) Iron(III)-zinc(II) purple acid phosphatase (EC 3.1.3.2)| (PAP) Length = 432 Score = 55.1 bits (131), Expect = 1e-07 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 5/136 (3%) Frame = +3 Query: 138 VFHIGDMPYANGYLS----QWDQFTAQVAPISAKKPYMVASGNHERDW-PNTGGFFDVKD 302 V +GD+ YA+ Y + +WD + A +P++ +GNHE ++ P K Sbjct: 159 VLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKP 218 Query: 303 SGGECGVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECLSTV 482 VP Y +++ + FWY + V S + GTPQY ++++ L V Sbjct: 219 FSYRYHVP-----YEASQSTSPFWYSIKRASAHIIVLSSHIAYGRGTPQYTWLKKELRKV 273 Query: 483 DRKHQPWLIFTAHRVL 530 R PWLI H L Sbjct: 274 KRSETPWLIVLMHSPL 289
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 53.1 bits (126), Expect = 5e-07 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Frame = +3 Query: 138 VFHIGDMPYANGYLS----QWDQFTAQVAPISAKKPYMVASGNHERDW-PNTGGFFDVKD 302 V +GD+ YA+ Y + +WD + V A +P++ +GNHE D+ P+ G K Sbjct: 192 VLFVGDLSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPDIGEIEPFK- 250 Query: 303 SGGECGVPAETMYYYPAENRANF---WYKVDYGMFRFCVGDSEHDWREGTPQYKFIEECL 473 P Y+ P + + WY + V + TPQYK++E+ L Sbjct: 251 -------PFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKEL 303 Query: 474 STVDRKHQPWLIFTAH 521 V+R PWLI H Sbjct: 304 QGVNRTETPWLIVLVH 319
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 48.1 bits (113), Expect = 1e-05 Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 26/132 (19%) Frame = +3 Query: 150 GDMPYANGYLSQWDQFTAQVAPISAKKPYMVASGNHERDWPNTGGFFDV-----KDSGGE 314 GDM Y S WD + + ++ K PYMV GNHE G ++ D Sbjct: 276 GDMSVL--YESNWDLWQQWLNNVTLKIPYMVLPGNHEASCAEFDGPHNILTAYLNDDIAN 333 Query: 315 CGVPAETMYYY--PAENR-------------------ANFWYKVDYGMFRFCVGDSEHDW 431 P + + YY P R NFWY DYG+ F D E D+ Sbjct: 334 GTAPTDNLTYYSCPPSQRNFTAYQHRFRMPGPETGGVGNFWYSFDYGLAHFVSIDGETDF 393 Query: 432 REGTPQYKFIEE 467 +P++ F E+ Sbjct: 394 -ANSPEWNFAED 404
>PPB_LYSEN (Q05205) Alkaline phosphatase precursor (EC 3.1.3.1) (APASE)| Length = 539 Score = 35.0 bits (79), Expect = 0.13 Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 9/126 (7%) Frame = +3 Query: 54 GSNEFANYQPGSLNTTDRLIEDLDNYDIVFHIGDMPYANGYLSQ--------WDQFTAQV 209 G+ + + + T LI + N VF GD Y +G LS+ W +F A Sbjct: 155 GAGDICDTSGNACQGTSDLIVSI-NPTAVFTAGDNAYNSGTLSEYNSRYAPTWGRFKALT 213 Query: 210 APISAKKPYMVASGNHERDWPNTGGFFDVKD-SGGECGVPAETMYYYPAENRANFWYKVD 386 +P + GNH+ G+FD + SG + G PA +R+ +Y D Sbjct: 214 SP---------SPGNHDYSTTGAKGYFDYFNGSGNQTG---------PAGDRSKGYYSWD 255 Query: 387 YGMFRF 404 G + F Sbjct: 256 VGDWHF 261
>PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precursor (EC| 3.1.3.2) (Acid phosphatase PII) Length = 436 Score = 33.1 bits (74), Expect = 0.50 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 Query: 366 NFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEE 467 NFWY DYG+ F D E D+ +P++ F E+ Sbjct: 247 NFWYSFDYGLAHFVSIDGETDF-ANSPEWNFAED 279
>GLGB_LACAC (Q5FL68) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 638 Score = 31.6 bits (70), Expect = 1.4 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +3 Query: 318 GVPAETMYYYPAENRANFWYKVDYGMFRFCVGDSEHDWREGTPQYKFIEE 467 G P E + A ++ N D+ FC+ D + +GTP Y+F E+ Sbjct: 211 GTPRELQDFVEACHKENIGVLADWVPGHFCINDDALAYYDGTPCYEFSEK 260
>TLN1_MOUSE (P26039) Talin-1| Length = 2541 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 6 LQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIED 119 L I+F G R+G+ FA+++ G L T L+ED Sbjct: 1992 LDTTIMFATAGTLNREGAETFADHREGILKTAKVLVED 2029
>TLN1_HUMAN (Q9Y490) Talin-1| Length = 2541 Score = 30.8 bits (68), Expect = 2.5 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 6 LQRIIVFGDMGKAERDGSNEFANYQPGSLNTTDRLIED 119 L I+F G R+G+ FA+++ G L T L+ED Sbjct: 1992 LDTTIMFATAGTLNREGTETFADHREGILKTAKVLVED 2029
>ERB1_HUMAN (P60509) HERV-R(b)_3p24.3 provirus ancestral Env polyprotein| precursor (Envelope polyprotein) (HERV-R(b) Env protein) [Includes: Surface protein domain (SU); Transmembrane protein domain (TM)] Length = 514 Score = 30.8 bits (68), Expect = 2.5 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Frame = +3 Query: 162 YANGYLSQWDQF---TAQVAPISAKKPYMVASGNHERD-WPNT 278 Y NG+L WD F TA +S P NH D WPNT Sbjct: 185 YRNGFLQIWDGFIWLTATKGHLSQIAPLCWEQRNHSLDNWPNT 227
>ZN513_HUMAN (Q8N8E2) Zinc finger protein 513| Length = 479 Score = 30.0 bits (66), Expect = 4.2 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -1 Query: 319 PHSPPESLTSKNPPVLG 269 PHSPP L+S+ PP LG Sbjct: 451 PHSPPSVLSSRGPPALG 467
>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I| Length = 602 Score = 29.3 bits (64), Expect = 7.2 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +2 Query: 353 RKQSKLLVQGG--LRDVPVXXXXXXXXXXXXHPAVQVHRGVPVDGGPEAPAVA-HLHGAP 523 +KQ+++ GG LRDVP PA +P+ G PE PAVA + GAP Sbjct: 138 KKQNEVRAPGGQDLRDVPAVEVNHPVQRGPEAPAA----ALPMPGAPERPAVALPMPGAP 193
>CBIX_METMP (P61819) Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) (CbiXS)| Length = 144 Score = 28.9 bits (63), Expect = 9.3 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = +3 Query: 129 YDIVFHIGDMPYANGYLSQWDQFTAQVAPISAKK----PYMVASGNH-ERDWPNTGGFFD 293 YDIV +G M + + Q + +V AKK P +A GNH ERD P G ++ Sbjct: 33 YDIV-EVGMMEFNEPTIPQTIK---KVIDAGAKKVIVTPVFLAPGNHTERDIPKILGIYE 88 Query: 294 VKDSGG 311 D GG Sbjct: 89 GDDEGG 94 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.122 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,127,912 Number of Sequences: 219361 Number of extensions: 1237365 Number of successful extensions: 3754 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3750 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
