Clone Name | bah63f12 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1513 Score = 611 bits (308), Expect = e-171 Identities = 551/632 (87%) Strand = Plus / Plus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 499 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 558 Query: 106 atgggcaagttcaaggccaccgactccccactcccgactgtgccagggtacgacatggcc 165 |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 559 gccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggcc 618 Query: 166 ggagtcgtcgtcaaggtcggcagccaggtaaagaacctcaaggagggcgacgaggtgtac 225 || || || || |||| ||| || |||| ||| || ||||| || |||||||||||| Sbjct: 619 ggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtac 678 Query: 226 ggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcgctggcggagtac 285 ||| ||||||||||||||| || ||||| ||||| |||| || ||||||||||||||| Sbjct: 679 ggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtac 738 Query: 286 accgccgtggaggagaagctggtggccctcaagccaaagagcatcgacttcgcgcaggcc 345 ||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||||||||| Sbjct: 739 accgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggcc 798 Query: 346 gccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagggcgggcttctcc 405 ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 799 gccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctcc 858 Query: 406 gccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcccttgtcatccag 465 ||||||||||||||||| |||||||||||||||| || ||||| ||||| | ||||||| Sbjct: 859 gccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccag 918 Query: 466 ctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaagctg 525 ||||| ||||| || |||||||| || ||||||||||| || || ||||| || |||||| Sbjct: 919 ctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctg 978 Query: 526 gagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttcgac 585 |||||||| || ||||| || |||||||| |||||||||||||||||||| | |||||| Sbjct: 979 gagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgag 1038 Query: 586 gacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggcgagaaggcggtc 645 ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 1039 gacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtc 1098 Query: 646 aaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||| Sbjct: 1099 aaggtggtgaaggaagggggcagcgtggtggt 1130
>ref|XM_482105.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1392 Score = 611 bits (308), Expect = e-171 Identities = 551/632 (87%) Strand = Plus / Plus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 342 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 401 Query: 106 atgggcaagttcaaggccaccgactccccactcccgactgtgccagggtacgacatggcc 165 |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 402 gccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggcc 461 Query: 166 ggagtcgtcgtcaaggtcggcagccaggtaaagaacctcaaggagggcgacgaggtgtac 225 || || || || |||| ||| || |||| ||| || ||||| || |||||||||||| Sbjct: 462 ggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtac 521 Query: 226 ggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcgctggcggagtac 285 ||| ||||||||||||||| || ||||| ||||| |||| || ||||||||||||||| Sbjct: 522 ggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtac 581 Query: 286 accgccgtggaggagaagctggtggccctcaagccaaagagcatcgacttcgcgcaggcc 345 ||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||||||||| Sbjct: 582 accgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggcc 641 Query: 346 gccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagggcgggcttctcc 405 ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 642 gccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctcc 701 Query: 406 gccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcccttgtcatccag 465 ||||||||||||||||| |||||||||||||||| || ||||| ||||| | ||||||| Sbjct: 702 gccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccag 761 Query: 466 ctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaagctg 525 ||||| ||||| || |||||||| || ||||||||||| || || ||||| || |||||| Sbjct: 762 ctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctg 821 Query: 526 gagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttcgac 585 |||||||| || ||||| || |||||||| |||||||||||||||||||| | |||||| Sbjct: 822 gagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgag 881 Query: 586 gacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggcgagaaggcggtc 645 ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 882 gacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtc 941 Query: 646 aaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||| Sbjct: 942 aaggtggtgaaggaagggggcagcgtggtggt 973
>ref|XM_507214.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125 mRNA Length = 1510 Score = 611 bits (308), Expect = e-171 Identities = 551/632 (87%) Strand = Plus / Plus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 387 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 446 Query: 106 atgggcaagttcaaggccaccgactccccactcccgactgtgccagggtacgacatggcc 165 |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 447 gccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggcc 506 Query: 166 ggagtcgtcgtcaaggtcggcagccaggtaaagaacctcaaggagggcgacgaggtgtac 225 || || || || |||| ||| || |||| ||| || ||||| || |||||||||||| Sbjct: 507 ggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtac 566 Query: 226 ggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcgctggcggagtac 285 ||| ||||||||||||||| || ||||| ||||| |||| || ||||||||||||||| Sbjct: 567 ggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtac 626 Query: 286 accgccgtggaggagaagctggtggccctcaagccaaagagcatcgacttcgcgcaggcc 345 ||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||||||||| Sbjct: 627 accgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggcc 686 Query: 346 gccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagggcgggcttctcc 405 ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 687 gccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctcc 746 Query: 406 gccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcccttgtcatccag 465 ||||||||||||||||| |||||||||||||||| || ||||| ||||| | ||||||| Sbjct: 747 gccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccag 806 Query: 466 ctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaagctg 525 ||||| ||||| || |||||||| || ||||||||||| || || ||||| || |||||| Sbjct: 807 ctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctg 866 Query: 526 gagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttcgac 585 |||||||| || ||||| || |||||||| |||||||||||||||||||| | |||||| Sbjct: 867 gagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgag 926 Query: 586 gacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggcgagaaggcggtc 645 ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 927 gacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtc 986 Query: 646 aaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||| Sbjct: 987 aaggtggtgaaggaagggggcagcgtggtggt 1018
>dbj|AK109433.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C06, full insert sequence Length = 1503 Score = 611 bits (308), Expect = e-171 Identities = 551/632 (87%) Strand = Plus / Plus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 493 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 552 Query: 106 atgggcaagttcaaggccaccgactccccactcccgactgtgccagggtacgacatggcc 165 |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 553 gccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggcc 612 Query: 166 ggagtcgtcgtcaaggtcggcagccaggtaaagaacctcaaggagggcgacgaggtgtac 225 || || || || |||| ||| || |||| ||| || ||||| || |||||||||||| Sbjct: 613 ggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtac 672 Query: 226 ggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcgctggcggagtac 285 ||| ||||||||||||||| || ||||| ||||| |||| || ||||||||||||||| Sbjct: 673 ggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtac 732 Query: 286 accgccgtggaggagaagctggtggccctcaagccaaagagcatcgacttcgcgcaggcc 345 ||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||||||||| Sbjct: 733 accgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggcc 792 Query: 346 gccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagggcgggcttctcc 405 ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 793 gccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctcc 852 Query: 406 gccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcccttgtcatccag 465 ||||||||||||||||| |||||||||||||||| || ||||| ||||| | ||||||| Sbjct: 853 gccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccag 912 Query: 466 ctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaagctg 525 ||||| ||||| || |||||||| || ||||||||||| || || ||||| || |||||| Sbjct: 913 ctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctg 972 Query: 526 gagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttcgac 585 |||||||| || ||||| || |||||||| |||||||||||||||||||| | |||||| Sbjct: 973 gagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgag 1032 Query: 586 gacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggcgagaaggcggtc 645 ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 1033 gacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtc 1092 Query: 646 aaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||| Sbjct: 1093 aaggtggtgaaggaagggggcagcgtggtggt 1124
>dbj|AK104318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D02, full insert sequence Length = 1392 Score = 611 bits (308), Expect = e-171 Identities = 551/632 (87%) Strand = Plus / Plus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 342 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 401 Query: 106 atgggcaagttcaaggccaccgactccccactcccgactgtgccagggtacgacatggcc 165 |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 402 gccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggcc 461 Query: 166 ggagtcgtcgtcaaggtcggcagccaggtaaagaacctcaaggagggcgacgaggtgtac 225 || || || || |||| ||| || |||| ||| || ||||| || |||||||||||| Sbjct: 462 ggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtac 521 Query: 226 ggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcgctggcggagtac 285 ||| ||||||||||||||| || ||||| ||||| |||| || ||||||||||||||| Sbjct: 522 ggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtac 581 Query: 286 accgccgtggaggagaagctggtggccctcaagccaaagagcatcgacttcgcgcaggcc 345 ||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||||||||| Sbjct: 582 accgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggcc 641 Query: 346 gccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagggcgggcttctcc 405 ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 642 gccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctcc 701 Query: 406 gccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcccttgtcatccag 465 ||||||||||||||||| |||||||||||||||| || ||||| ||||| | ||||||| Sbjct: 702 gccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccag 761 Query: 466 ctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaagctg 525 ||||| ||||| || |||||||| || ||||||||||| || || ||||| || |||||| Sbjct: 762 ctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctg 821 Query: 526 gagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttcgac 585 |||||||| || ||||| || |||||||| |||||||||||||||||||| | |||||| Sbjct: 822 gagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgag 881 Query: 586 gacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggcgagaaggcggtc 645 ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 882 gacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtc 941 Query: 646 aaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||| Sbjct: 942 aaggtggtgaaggaagggggcagcgtggtggt 973
>dbj|AK069608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N13, full insert sequence Length = 1510 Score = 611 bits (308), Expect = e-171 Identities = 551/632 (87%) Strand = Plus / Plus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 387 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 446 Query: 106 atgggcaagttcaaggccaccgactccccactcccgactgtgccagggtacgacatggcc 165 |||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||||| Sbjct: 447 gccggcaagttcaaggccaccgactcccctctcccgacggtgccggggtacgacgtggcc 506 Query: 166 ggagtcgtcgtcaaggtcggcagccaggtaaagaacctcaaggagggcgacgaggtgtac 225 || || || || |||| ||| || |||| ||| || ||||| || |||||||||||| Sbjct: 507 ggcgtggtggtgaaggccgggaggaaggtgaaggggctgaaggaaggggacgaggtgtac 566 Query: 226 ggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcgctggcggagtac 285 ||| ||||||||||||||| || ||||| ||||| |||| || ||||||||||||||| Sbjct: 567 ggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcgctggcggagtac 626 Query: 286 accgccgtggaggagaagctggtggccctcaagccaaagagcatcgacttcgcgcaggcc 345 ||||||||||||||||||||| |||| |||||||| |||||| ||| ||||||||||||| Sbjct: 627 accgccgtggaggagaagctgctggcgctcaagcccaagagcctcggcttcgcgcaggcc 686 Query: 346 gccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagggcgggcttctcc 405 ||||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 687 gccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgcgccggcttctcc 746 Query: 406 gccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcccttgtcatccag 465 ||||||||||||||||| |||||||||||||||| || ||||| ||||| | ||||||| Sbjct: 747 gccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctccctcgccatccag 806 Query: 466 ctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaagctg 525 ||||| ||||| || |||||||| || ||||||||||| || || ||||| || |||||| Sbjct: 807 ctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaagctg 866 Query: 526 gagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttcgac 585 |||||||| || ||||| || |||||||| |||||||||||||||||||| | |||||| Sbjct: 867 gagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttcgag 926 Query: 586 gacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggcgagaaggcggtc 645 ||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| Sbjct: 927 gacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggcgagaaggccgtc 986 Query: 646 aaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||| Sbjct: 987 aaggtggtgaaggaagggggcagcgtggtggt 1018
>dbj|AK112013.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C09, full insert sequence Length = 980 Score = 531 bits (268), Expect = e-148 Identities = 415/464 (89%) Strand = Plus / Plus Query: 214 gacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcg 273 ||||||||||||||| ||||||||||||||| || ||||| ||||| |||| || ||| Sbjct: 3 gacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcg 62 Query: 274 ctggcggagtacaccgccgtggaggagaagctggtggccctcaagccaaagagcatcgac 333 ||||||||||||||||||||||||||||||||| |||| |||||||| |||||| ||| | Sbjct: 63 ctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaagagcctcggc 122 Query: 334 ttcgcgcaggccgccggtctgccgctcgccatcgagaccgcccacgagggcctcgagagg 393 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 123 ttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggcctcgagcgc 182 Query: 394 gcgggcttctccgccggcaagtccatccttgtcctcggcggcgccggtggagtcgggtcc 453 || |||||||||||||||||||||||||| |||||||||||||||| || ||||| ||| Sbjct: 183 gccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggcgtcggctcc 242 Query: 454 cttgtcatccagctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagc 513 || | |||||||||||| ||||| || |||||||| || ||||||||||| || || ||| Sbjct: 243 ctcgccatccagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagc 302 Query: 514 accccgaagctggagctcctgaaaagcctgggagccgacgtggccatcgactacaccaag 573 || || |||||||||||||| || ||||| || |||||||| |||||||||||||||||| Sbjct: 303 acgcccaagctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaag 362 Query: 574 gacagcttcgacgacatgccggacaagtacgacgtcgtgttcgacgcagtcggccagggc 633 || | |||||| ||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 363 gagaacttcgaggacctgccggacaagtacgacgtcgtcctcgacgccgtcggccagggc 422 Query: 634 gagaaggcggtcaaggtggtgaaggaaggcggcagcgtggtggt 677 |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 423 gagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggt 466
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 303 bits (153), Expect = 4e-79 Identities = 234/261 (89%) Strand = Plus / Minus Query: 205 aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 264 ||||| || ||||||||||||||| ||||||||||||||| || ||||| ||||| ||| Sbjct: 17849628 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 17849569 Query: 265 ttcggctcgctggcggagtacaccgccgtggaggagaagctggtggccctcaagccaaag 324 | || |||||||||||||||||||||||||||||||||||| |||| |||||||| ||| Sbjct: 17849568 tcggggtcgctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaag 17849509 Query: 325 agcatcgacttcgcgcaggccgccggtctgccgctcgccatcgagaccgcccacgagggc 384 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 17849508 agcctcggcttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggc 17849449 Query: 385 ctcgagagggcgggcttctccgccggcaagtccatccttgtcctcggcggcgccggtgga 444 |||||| | || |||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 17849448 ctcgagcgcgccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggc 17849389 Query: 445 gtcgggtcccttgtcatccag 465 ||||| ||||| | ||||||| Sbjct: 17849388 gtcggctccctcgccatccag 17849368 Score = 151 bits (76), Expect = 4e-33 Identities = 142/164 (86%) Strand = Plus / Minus Query: 463 cagctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaag 522 |||||||| ||||| || |||||||| || ||||||||||| || || ||||| || ||| Sbjct: 17849271 cagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaag 17849212 Query: 523 ctggagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttc 582 ||||||||||| || ||||| || |||||||| |||||||||||||||||||| | |||| Sbjct: 17849211 ctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttc 17849152 Query: 583 gacgacatgccggacaagtacgacgtcgtgttcgacgcagtcgg 626 || ||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 17849151 gaggacctgccggacaagtacgacgtcgtcctcgacgccgtcgg 17849108 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 625 ggccagggcgagaaggcggtcaaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 17849005 ggccagggcgagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggt 17848953 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 17849882 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 17849823 Query: 106 atgggcaagttcaaggccaccgactccccactcccg 141 |||||||||||||||||||||||||| |||||| Sbjct: 17849822 gccggcaagttcaaggccaccgactcccctctcccg 17849787
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0709D11 Length = 146856 Score = 303 bits (153), Expect = 4e-79 Identities = 234/261 (89%) Strand = Plus / Minus Query: 205 aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 264 ||||| || ||||||||||||||| ||||||||||||||| || ||||| ||||| ||| Sbjct: 71134 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 71075 Query: 265 ttcggctcgctggcggagtacaccgccgtggaggagaagctggtggccctcaagccaaag 324 | || |||||||||||||||||||||||||||||||||||| |||| |||||||| ||| Sbjct: 71074 tcggggtcgctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaag 71015 Query: 325 agcatcgacttcgcgcaggccgccggtctgccgctcgccatcgagaccgcccacgagggc 384 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 71014 agcctcggcttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggc 70955 Query: 385 ctcgagagggcgggcttctccgccggcaagtccatccttgtcctcggcggcgccggtgga 444 |||||| | || |||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 70954 ctcgagcgcgccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggc 70895 Query: 445 gtcgggtcccttgtcatccag 465 ||||| ||||| | ||||||| Sbjct: 70894 gtcggctccctcgccatccag 70874 Score = 151 bits (76), Expect = 4e-33 Identities = 142/164 (86%) Strand = Plus / Minus Query: 463 cagctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaag 522 |||||||| ||||| || |||||||| || ||||||||||| || || ||||| || ||| Sbjct: 70777 cagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaag 70718 Query: 523 ctggagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttc 582 ||||||||||| || ||||| || |||||||| |||||||||||||||||||| | |||| Sbjct: 70717 ctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttc 70658 Query: 583 gacgacatgccggacaagtacgacgtcgtgttcgacgcagtcgg 626 || ||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 70657 gaggacctgccggacaagtacgacgtcgtcctcgacgccgtcgg 70614 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 625 ggccagggcgagaaggcggtcaaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 70511 ggccagggcgagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggt 70459 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 71388 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 71329 Query: 106 atgggcaagttcaaggccaccgactccccactcccg 141 |||||||||||||||||||||||||| |||||| Sbjct: 71328 gccggcaagttcaaggccaccgactcccctctcccg 71293
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011E04 Length = 136767 Score = 303 bits (153), Expect = 4e-79 Identities = 234/261 (89%) Strand = Plus / Minus Query: 205 aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 264 ||||| || ||||||||||||||| ||||||||||||||| || ||||| ||||| ||| Sbjct: 124022 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 123963 Query: 265 ttcggctcgctggcggagtacaccgccgtggaggagaagctggtggccctcaagccaaag 324 | || |||||||||||||||||||||||||||||||||||| |||| |||||||| ||| Sbjct: 123962 tcggggtcgctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaag 123903 Query: 325 agcatcgacttcgcgcaggccgccggtctgccgctcgccatcgagaccgcccacgagggc 384 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123902 agcctcggcttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggc 123843 Query: 385 ctcgagagggcgggcttctccgccggcaagtccatccttgtcctcggcggcgccggtgga 444 |||||| | || |||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 123842 ctcgagcgcgccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggc 123783 Query: 445 gtcgggtcccttgtcatccag 465 ||||| ||||| | ||||||| Sbjct: 123782 gtcggctccctcgccatccag 123762 Score = 151 bits (76), Expect = 4e-33 Identities = 142/164 (86%) Strand = Plus / Minus Query: 463 cagctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaag 522 |||||||| ||||| || |||||||| || ||||||||||| || || ||||| || ||| Sbjct: 123665 cagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaag 123606 Query: 523 ctggagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttc 582 ||||||||||| || ||||| || |||||||| |||||||||||||||||||| | |||| Sbjct: 123605 ctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttc 123546 Query: 583 gacgacatgccggacaagtacgacgtcgtgttcgacgcagtcgg 626 || ||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 123545 gaggacctgccggacaagtacgacgtcgtcctcgacgccgtcgg 123502 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 625 ggccagggcgagaaggcggtcaaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 123399 ggccagggcgagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggt 123347 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 124276 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 124217 Query: 106 atgggcaagttcaaggccaccgactccccactcccg 141 |||||||||||||||||||||||||| |||||| Sbjct: 124216 gccggcaagttcaaggccaccgactcccctctcccg 124181
>dbj|AK119345.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-E02, full insert sequence Length = 2944 Score = 303 bits (153), Expect = 4e-79 Identities = 234/261 (89%) Strand = Plus / Minus Query: 205 aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 264 ||||| || ||||||||||||||| ||||||||||||||| || ||||| ||||| ||| Sbjct: 2088 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 2029 Query: 265 ttcggctcgctggcggagtacaccgccgtggaggagaagctggtggccctcaagccaaag 324 | || |||||||||||||||||||||||||||||||||||| |||| |||||||| ||| Sbjct: 2028 tcggggtcgctggcggagtacaccgccgtggaggagaagctgctggcgctcaagcccaag 1969 Query: 325 agcatcgacttcgcgcaggccgccggtctgccgctcgccatcgagaccgcccacgagggc 384 ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1968 agcctcggcttcgcgcaggccgccgggctgccgctcgccatcgagaccgcccacgagggc 1909 Query: 385 ctcgagagggcgggcttctccgccggcaagtccatccttgtcctcggcggcgccggtgga 444 |||||| | || |||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 1908 ctcgagcgcgccggcttctccgccggcaagtccatcctcatcctcggcggcgccggcggc 1849 Query: 445 gtcgggtcccttgtcatccag 465 ||||| ||||| | ||||||| Sbjct: 1848 gtcggctccctcgccatccag 1828 Score = 151 bits (76), Expect = 4e-33 Identities = 142/164 (86%) Strand = Plus / Minus Query: 463 cagctggcgaagcaagtttacggcgcatcgaaggtggcggccacagccagcaccccgaag 522 |||||||| ||||| || |||||||| || ||||||||||| || || ||||| || ||| Sbjct: 1731 cagctggccaagcacgtgtacggcgcgtccaaggtggcggcgacggcgagcacgcccaag 1672 Query: 523 ctggagctcctgaaaagcctgggagccgacgtggccatcgactacaccaaggacagcttc 582 ||||||||||| || ||||| || |||||||| |||||||||||||||||||| | |||| Sbjct: 1671 ctggagctcctcaagagcctcggcgccgacgtcgccatcgactacaccaaggagaacttc 1612 Query: 583 gacgacatgccggacaagtacgacgtcgtgttcgacgcagtcgg 626 || ||| |||||||||||||||||||||| ||||||| ||||| Sbjct: 1611 gaggacctgccggacaagtacgacgtcgtcctcgacgccgtcgg 1568 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Minus Query: 625 ggccagggcgagaaggcggtcaaggtggtgaaggaaggcggcagcgtggtggt 677 ||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1465 ggccagggcgagaaggccgtcaaggtggtgaaggaagggggcagcgtggtggt 1413 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 46 gaccaggtgctggtgaaggtggcggccgcggcgctcaaccccgttgattccaagcggcgc 105 ||||||||||||||| || || ||||| |||||||||||||| || ||||||| ||| Sbjct: 2342 gaccaggtgctggtgcgcgtcgccgccgccgcgctcaaccccgtcgacgccaagcgccgc 2283 Query: 106 atgggcaagttcaaggccaccgactccccactcccg 141 |||||||||||||||||||||||||| |||||| Sbjct: 2282 gccggcaagttcaaggccaccgactcccctctcccg 2247
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 61 aaggtggcggccgcggcgctcaaccccgttga 92 ||||| |||||||| ||||||||||||||||| Sbjct: 5801052 aaggtcgcggccgccgcgctcaaccccgttga 5801083 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 335 tcgcgcaggccgccggtctgccgct 359 |||||||||||||||| |||||||| Sbjct: 2705281 tcgcgcaggccgccgggctgccgct 2705305 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 gggcgggcttctccgccggc 411 |||||||||||||||||||| Sbjct: 5718607 gggcgggcttctccgccggc 5718588
>gb|AC009471.5| Homo sapiens BAC clone RP11-168K7 from 2, complete sequence Length = 172445 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 gaggaccaggtgctggtgaaggtggc 68 |||||| ||||||||||||||||||| Sbjct: 140783 gaggacaaggtgctggtgaaggtggc 140808
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 tcgacttcgcgcaggccgccg 349 ||||||||||||||||||||| Sbjct: 2593636 tcgacttcgcgcaggccgccg 2593656
>ref|XM_426551.1| PREDICTED: Gallus gallus similar to carbamoyl-phosphate synthetase III (LOC428994), mRNA Length = 6789 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 512 gcaccccgaagctggagctcctgaa 536 |||| |||||||||||||||||||| Sbjct: 968 gcacgccgaagctggagctcctgaa 944
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 cctcaaggagggcgacgaggt 221 ||||||||||||||||||||| Sbjct: 1583897 cctcaaggagggcgacgaggt 1583877
>ref|XM_809374.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508851.50) partial mRNA Length = 1857 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 ctcaaggagggcgacgaggtg 222 ||||||||||||||||||||| Sbjct: 1327 ctcaaggagggcgacgaggtg 1347
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 48 ccaggtgctggtgaaggtggcggcc 72 |||||||||||||||||||| |||| Sbjct: 342293 ccaggtgctggtgaaggtggtggcc 342317
>ref|XM_315706.2| Anopheles gambiae str. PEST ENSANGP00000016480 (ENSANGG00000013991), partial mRNA Length = 1710 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 aaggagggcgacgaggtgtac 225 ||||||||||||||||||||| Sbjct: 205 aaggagggcgacgaggtgtac 225
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 542 tgggagccgacgtggccatcgactacacc 570 |||| |||||||||||| ||||||||||| Sbjct: 3014832 tgggcgccgacgtggccgtcgactacacc 3014860
>emb|V00899.1|OCTR08 Rabbit troponin T messenger fragment (aa 49 to 129) Length = 244 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 ggaggagaagctggtggccctcaag 318 ||||||| ||||||||||||||||| Sbjct: 115 ggaggaggagctggtggccctcaag 139
>ref|NM_022469.3| Homo sapiens gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis) (GREM2), mRNA Length = 4199 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ggtgctggtgaaggtggcgg 70 |||||||||||||||||||| Sbjct: 319 ggtgctggtgaaggtggcgg 338
>ref|XM_525111.1| PREDICTED: Pan troglodytes similar to gremlin 2 homolog, cysteine knot superfamily; protein related to DAN and cerberus (LOC469727), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ggtgctggtgaaggtggcgg 70 |||||||||||||||||||| Sbjct: 534 ggtgctggtgaaggtggcgg 553
>ref|XM_470860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 834 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gaaggtggcggccgcggcgc 79 |||||||||||||||||||| Sbjct: 349 gaaggtggcggccgcggcgc 368
>gb|BT018785.1| Zea mays clone EL01N0527F04.d mRNA sequence Length = 1402 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 433 ccaggtgctggtgaaggtgg 452
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 cctcggcggcgccggtggag 445 |||||||||||||||||||| Sbjct: 106937 cctcggcggcgccggtggag 106918
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 aggtgctggtgaaggtggcg 69 |||||||||||||||||||| Sbjct: 66838 aggtgctggtgaaggtggcg 66857
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gaaggtggcggccgcggcgc 79 |||||||||||||||||||| Sbjct: 69456 gaaggtggcggccgcggcgc 69437
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 cgttgattccaagcggcgca 106 |||||||||||||||||||| Sbjct: 106082 cgttgattccaagcggcgca 106063
>gb|AF538844.1| Homo sapiens matrix metalloproteinase 9 (gelatinase B, 92kD gelatinase, 92kD type IV collagenase) (MMP9) gene, complete cds Length = 11224 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 7271 gcctgggagccgacgtggcc 7290
>gb|AY658418.1| Synthetic construct Peudomonas aeruginosa clone FLH047217.01F PA4762 gene, partial cds Length = 561 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 gtcctcggcggcgccggtgg 443 |||||||||||||||||||| Sbjct: 66 gtcctcggcggcgccggtgg 47
>ref|XM_869700.1| PREDICTED: Bos taurus similar to splicing factor, arginine/serine rich 9 (predicted) (LOC617440), mRNA Length = 1532 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gtacggccacatcagcgaga 241 |||||||||||||||||||| Sbjct: 288 gtacggccacatcagcgaga 307
>ref|NM_004994.2| Homo sapiens matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) (MMP9), mRNA Length = 2387 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 1833 gcctgggagccgacgtggcc 1852
>gb|AE009204.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 230 of 256 of the complete sequence Length = 11186 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gcgcaggccgccggtctgcc 356 |||||||||||||||||||| Sbjct: 9240 gcgcaggccgccggtctgcc 9259
>gb|DQ194553.1| Homo sapiens matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) (MMP9) gene, complete cds Length = 11651 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 7280 gcctgggagccgacgtggcc 7299
>gb|AC126608.20| Mus musculus chromosome 19, clone RP24-166L20, complete sequence Length = 139126 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 catgggcaagttcaaggcca 124 |||||||||||||||||||| Sbjct: 37521 catgggcaagttcaaggcca 37540
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gaaggtggcggccgcggcgc 79 |||||||||||||||||||| Sbjct: 15807656 gaaggtggcggccgcggcgc 15807637
>emb|AJ298054.1|MMA298054 Mus musculus Ly57 gene for lymphocyte antigen 57 Length = 71456 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 catgggcaagttcaaggcca 124 |||||||||||||||||||| Sbjct: 52190 catgggcaagttcaaggcca 52171
>ref|XM_447784.1| Candida glabrata CBS138, CAGL0J01771g partial mRNA Length = 4662 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 3097 ccaggtgctggtgaaggtgg 3116 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 2821 ccaggtgctggtgaaggtgg 2840
>gb|AC117253.3| Mus musculus BAC clone RP24-405A12 from chromosome 19, complete sequence Length = 142903 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 catgggcaagttcaaggcca 124 |||||||||||||||||||| Sbjct: 498 catgggcaagttcaaggcca 479
>gb|BC006093.1| Homo sapiens matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase), mRNA (cDNA clone MGC:12688 IMAGE:4054882), complete cds Length = 2373 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 1819 gcctgggagccgacgtggcc 1838
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 38 tgggcgaggaccaggtgctggtgaaggt 65 |||||||||| |||| |||||||||||| Sbjct: 1955096 tgggcgaggatcaggggctggtgaaggt 1955123
>emb|AL445483.13| Human DNA sequence from clone RP11-92G12 on chromosome 1 Contains the KIF14 gene for kinesin family member 14, a novel gene (DKFZp564B1023) and a novel gene, complete sequence Length = 164008 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ctccccactcccgactgtgc 148 |||||||||||||||||||| Sbjct: 83546 ctccccactcccgactgtgc 83565
>gb|BT010264.1| Drosophila melanogaster RE27764 full insert cDNA Length = 5090 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtggaggagaagctggtggc 311 |||||||||||||||||||| Sbjct: 4604 gtggaggagaagctggtggc 4585
>emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on chromosome 1 Contains the gene for protein related to DAN and cerberus (FLJ21195), two novel genes, a pseudogene similar to part of cytochrome c oxidase I (MTCOI1), a ribosomal protein S11 (RPS11) pseudogene, a ferredoxin pseudogene and a CpG island, complete sequence Length = 184311 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 ggtgctggtgaaggtggcgg 70 |||||||||||||||||||| Sbjct: 17542 ggtgctggtgaaggtggcgg 17523
>emb|AL353588.25| Human DNA sequence from clone RP11-444E17 on chromosome 6 Contains the gene for a novel protein (possible ortholog of mouse TCTE1), the gene for novel protein (KIAA1270), a novel gene, the 5' end of a novel gene (possible ortholog of rodent CDC5-like protein), the 3' part of a novel gene and three CpG islands, complete sequence Length = 145947 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 24621 ccaggtgctggtgaaggtgg 24602
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 166649 ccaggtgctggtgaaggtgg 166630 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 166373 ccaggtgctggtgaaggtgg 166354
>emb|BX842651.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 6/11 Length = 346161 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ggcgcatcgaaggtggcggc 503 |||||||||||||||||||| Sbjct: 198463 ggcgcatcgaaggtggcggc 198482
>gb|BC046632.1| Homo sapiens gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis), mRNA (cDNA clone MGC:44218 IMAGE:5288555), complete cds Length = 3208 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ggtgctggtgaaggtggcgg 70 |||||||||||||||||||| Sbjct: 247 ggtgctggtgaaggtggcgg 266
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 271 tcgctggcggagtacaccgccgtggagg 298 |||||||| ||||||||||| ||||||| Sbjct: 125947 tcgctggccgagtacaccgcggtggagg 125974
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 cggccagggcgagaaggcgg 643 |||||||||||||||||||| Sbjct: 108900 cggccagggcgagaaggcgg 108881
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 ctggtgaaggtggcggccgcggcg 78 |||||||||| ||||||||||||| Sbjct: 76537 ctggtgaaggcggcggccgcggcg 76560
>gb|AC009840.7| Drosophila melanogaster 3L BAC RP98-2B14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194790 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtggaggagaagctggtggc 311 |||||||||||||||||||| Sbjct: 78146 gtggaggagaagctggtggc 78165
>ref|NM_140971.1| Drosophila melanogaster CG5195-RA (CG5195), mRNA Length = 5071 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gtggaggagaagctggtggc 311 |||||||||||||||||||| Sbjct: 4605 gtggaggagaagctggtggc 4586
>dbj|AB206256.1| Cupriavidus necator phaZd gene for intracellular poly(3-hydroxybutyrate) depolymerase, complete cds Length = 3103 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 aaggtggcggccgcggcgct 80 |||||||||||||||||||| Sbjct: 2077 aaggtggcggccgcggcgct 2096
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gcgcaggccgccggtctgcc 356 |||||||||||||||||||| Sbjct: 2558894 gcgcaggccgccggtctgcc 2558913
>gb|AF232751.1| Mycobacterium avium subsp. paratuberculosis major membrane protein-1 gene, partial cds; nifS-like protein gene, complete cds; and unknown protein gene, partial cds Length = 4180 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ggtgctggtgaaggtggcggccgc 74 ||||||||||||||||||| |||| Sbjct: 3971 ggtgctggtgaaggtggcgtccgc 3994
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 618 cgcagtcggccagggcgagaaggc 641 ||||| |||||||||||||||||| Sbjct: 3316118 cgcagccggccagggcgagaaggc 3316095
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 572 aggacagcttcgacgacatgccgg 595 |||||||| ||||||||||||||| Sbjct: 486034 aggacagcatcgacgacatgccgg 486057
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 gccgctcgccatcgagaccg 373 |||||||||||||||||||| Sbjct: 4344981 gccgctcgccatcgagaccg 4344962 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 tcgacttcgcgcaggccgccggtc 352 |||||||||||||||||| ||||| Sbjct: 3834685 tcgacttcgcgcaggccgacggtc 3834708
>gb|AF319998.1|AF319998 Stigmatella aurantiaca myxalamid biosynthetic gene cluster, complete sequence Length = 49736 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggccgcggcgctcaacccc 87 |||||||||||||||||||| Sbjct: 38133 cggccgcggcgctcaacccc 38152
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gaaggtggcggccgcggcgc 79 |||||||||||||||||||| Sbjct: 15802190 gaaggtggcggccgcggcgc 15802171
>gb|AE004890.1| Pseudomonas aeruginosa PAO1, section 451 of 529 of the complete genome Length = 12326 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gtcctcggcggcgccggtgg 443 |||||||||||||||||||| Sbjct: 571 gtcctcggcggcgccggtgg 590
>gb|AE004817.1| Pseudomonas aeruginosa PAO1, section 378 of 529 of the complete genome Length = 16964 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tcaaggtcggcagccaggta 195 |||||||||||||||||||| Sbjct: 8500 tcaaggtcggcagccaggta 8481
>gb|AE004543.1| Pseudomonas aeruginosa PAO1, section 104 of 529 of the complete genome Length = 10589 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 gccgacgtggccatcgactacacc 570 ||||||||||| |||||||||||| Sbjct: 7996 gccgacgtggcgatcgactacacc 7973
>gb|AY724229.1| Uncultured bacterium clone DUNnos247 (+1C) (nosOTU#037) nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tcaaggagggcgacgaggtg 222 |||||||||||||||||||| Sbjct: 497 tcaaggagggcgacgaggtg 516
>gb|AY724226.1| Uncultured bacterium clone DUNnos245 (+1C) (nosOTU#037) nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tcaaggagggcgacgaggtg 222 |||||||||||||||||||| Sbjct: 497 tcaaggagggcgacgaggtg 516
>gb|AY889934.1| Synthetic construct Homo sapiens clone FLH116913.01X matrix metalloproteinase 9 (MMP9) mRNA, complete cds Length = 2124 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 1814 gcctgggagccgacgtggcc 1833
>dbj|AK120906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H21, full insert sequence Length = 1714 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gaaggtggcggccgcggcgc 79 |||||||||||||||||||| Sbjct: 333 gaaggtggcggccgcggcgc 352
>dbj|AK120483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K02, full insert sequence Length = 2656 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gaaggtggcggccgcggcgc 79 |||||||||||||||||||| Sbjct: 287 gaaggtggcggccgcggcgc 306
>dbj|AK024848.1| Homo sapiens cDNA: FLJ21195 fis, clone COL00185 Length = 2029 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 ggtgctggtgaaggtggcgg 70 |||||||||||||||||||| Sbjct: 306 ggtgctggtgaaggtggcgg 325
>ref|NM_210926.1| Eremothecium gossypii AFR025Cp (AFR025C), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 572 aggacagcttcgacgacatgccgg 595 |||||||| ||||||||||||||| Sbjct: 598 aggacagcatcgacgacatgccgg 575
>gb|AY913117.1| Uncultured forest soil bacterium clone DUNnos246 nitrous oxide reductase (nosZ) gene, partial cds Length = 672 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 tcaaggagggcgacgaggtg 222 |||||||||||||||||||| Sbjct: 497 tcaaggagggcgacgaggtg 516
>gb|AY105724.1| Zea mays PCO149105 mRNA sequence Length = 1357 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ccaggtgctggtgaaggtgg 67 |||||||||||||||||||| Sbjct: 521 ccaggtgctggtgaaggtgg 540
>gb|AF147448.1|AF147448 Pseudomonas aeruginosa strain PAO1 penicillin-binding protein 2 (pbpA), rod-shape-determining protein (rodA), membrane-bound lytic transglycosylase (mltB), rare lipoprotein A (rlpA), penicillin-binding protein 5 (dacA), and lipoate biosynthesis protein B (lipB) genes, complete cds; and unknown gene Length = 7543 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tcaaggtcggcagccaggta 195 |||||||||||||||||||| Sbjct: 5590 tcaaggtcggcagccaggta 5609
>gb|AE003591.4| Drosophila melanogaster chromosome 3L, section 72 of 83 of the complete sequence Length = 301136 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 gtggaggagaagctggtggc 311 |||||||||||||||||||| Sbjct: 127438 gtggaggagaagctggtggc 127457
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 51 ggtgctggtgaaggtggcggccgc 74 ||||||||||||||||||| |||| Sbjct: 2346853 ggtgctggtgaaggtggcgtccgc 2346830
>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete sequence Length = 150791 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 100603 gcctgggagccgacgtggcc 100622
>emb|AL663092.15| Mouse DNA sequence from clone RP23-91I20 on chromosome 2, complete sequence Length = 207554 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 aaggtggcggccacagccagcacc 516 ||||||| |||||||||||||||| Sbjct: 171932 aaggtggtggccacagccagcacc 171909
>gb|J05070.1|HUM4COLA Human type IV collagenase mRNA, complete cds Length = 2334 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 1833 gcctgggagccgacgtggcc 1852
>gb|M68353.1|HUMIVCOL11 Human type IV collagenase (CLG4B) gene, exon 11 Length = 171 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 539 gcctgggagccgacgtggcc 558 |||||||||||||||||||| Sbjct: 74 gcctgggagccgacgtggcc 93 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,355,838 Number of Sequences: 3902068 Number of extensions: 4355838 Number of successful extensions: 108304 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105976 Number of HSP's gapped (non-prelim): 2322 length of query: 677 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 654 effective length of database: 17,143,297,704 effective search space: 11211716698416 effective search space used: 11211716698416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)