ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63f10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY104909.1| Zea mays PCO111730 mRNA sequence 601 e-169
2dbj|AK105686.1| Oryza sativa (japonica cultivar-group) cDNA clon... 529 e-147
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 466 e-128
4dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic D... 466 e-128
5emb|AJ630655.1| Cicer arietinum partial mRNA for C2 domain-conta... 84 5e-13
6gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete s... 60 8e-06
7ref|NM_127781.4| Arabidopsis thaliana unknown protein AT2G22125 ... 42 1.8
8gb|BT010988.1| Arabidopsis thaliana At2g22125 mRNA, complete cds 42 1.8
9gb|BT010720.1| Arabidopsis thaliana At2g22125 mRNA, complete cds 42 1.8
10gb|AC007232.6| Arabidopsis thaliana chromosome 2 clone T16B14 ma... 42 1.8
11gb|AC007168.5| Arabidopsis thaliana chromosome 2 clone T26C19 ma... 42 1.8
12emb|BX821282.1|CNS0A8BO Arabidopsis thaliana Full-length cDNA Co... 42 1.8
13gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosom... 40 7.2
14gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, compl... 40 7.2
15emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chrom... 40 7.2
16emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on ch... 40 7.2
17gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 ma... 40 7.2
18gb|DP000030.1| Sus scrofa target 116 genomic scaffold 40 7.2
19emb|AL365294.4|CNS05TF4 Human chromosome 14 DNA sequence BAC R-7... 40 7.2
20emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, com... 40 7.2
21gb|AC006256.1|AC006256 Homo sapiens chromosome 18, clone hRPK.12... 40 7.2
22gb|AF027153.1|AF027153 Homo sapiens sodium/myo-inositol cotransp... 40 7.2
23emb|AJ130806.1|PRE130806 Pinnixa retinens partial mitochondrial ... 40 7.2
24emb|AL356016.2|CNS05TD6 Human chromosome 14 DNA sequence BAC R-9... 40 7.2

>gb|AY104909.1| Zea mays PCO111730 mRNA sequence
          Length = 1169

 Score =  601 bits (303), Expect = e-169
 Identities = 453/503 (90%)
 Strand = Plus / Plus

                                                                       
Query: 24  aaggatatatgggcatctgggagtgccaatgaggagtatcttaaagcgctcaatgcttta 83
           |||||||||||||| ||||| ||||| || || |||||||| ||||| ||||||||||| 
Sbjct: 238 aaggatatatgggcttctggaagtgctaacgaagagtatctcaaagcactcaatgctttg 297

                                                                       
Query: 84  cttagcaatttccctcgtctgagagtcactgaacctgctacaatatgcattccgcatctt 143
           || || || |||||||||||||| |||||||||||||| ||| | |||||||| ||||||
Sbjct: 298 ctgagtaacttccctcgtctgagggtcactgaacctgccacattgtgcattcctcatctt 357

                                                                       
Query: 144 gtaacatcccttaaaactggttctgaagcaactcaagaagcagcactggattcactatat 203
           |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 358 gtaacatcccttaaaactggttctgaggcaactcaagaggcagcactagattcactatat 417

                                                                       
Query: 204 ctgctaagacaagcatggtcggcttgcccagcggaagtgtttaaagctcaatcagttgct 263
           || || || ||||| ||||| ||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 418 cttctcaggcaagcttggtcagcttgcccagctgaagtatttaaagcacaatcagtcgct 477

                                                                       
Query: 264 gcctcagaggctattcctctacttcagtacttgatacagtctggcccaccacggtttcaa 323
           || || |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 478 gcatcggaggctattcctctacttcagtacttgatacagtctggcccaccgcggtttcaa 537

                                                                       
Query: 324 gagaaggcagagttgctacttcagtgcttgcctgggacacttacagttactataaaacgt 383
           || |||||||| ||||| |||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 538 gaaaaggcagaattgcttcttcagtgcttgcctgggactcttactgttacaataaaacgt 597

                                                                       
Query: 384 ggcaacaatctgaggcaatcagtgggaaatgctagcgcattctgcaagcttactcttgga 443
           ||||||||||| ||||||||||| |||||| |||| || |||||||||||||||||||||
Sbjct: 598 ggcaacaatctaaggcaatcagttggaaatcctagtgccttctgcaagcttactcttgga 657

                                                                       
Query: 444 aataatccagcaaggctgacaaagattgtctcgactggtgagtcacctgaatgggatgag 503
           ||||||||| || ||||||||||||||||||||||||| | | |||||||||||||||| 
Sbjct: 658 aataatccaccacggctgacaaagattgtctcgactggcgcgacacctgaatgggatgaa 717

                                  
Query: 504 gccttcgcatgggcttttgacag 526
           ||||| |||||||| ||||||||
Sbjct: 718 gcctttgcatgggcatttgacag 740



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>dbj|AK105686.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B10, full
            insert sequence
          Length = 3335

 Score =  529 bits (267), Expect = e-147
 Identities = 460/523 (87%), Gaps = 1/523 (0%)
 Strand = Plus / Plus

                                                                        
Query: 7    aactgcttcaatccgagaaggatatatgggcatctgggagtgccaatgaggagtatctta 66
            ||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 2397 aactgcttcaatt-gagaaggacatatgggcatctgggagtgctaatgaggagtatctta 2455

                                                                        
Query: 67   aagcgctcaatgctttacttagcaatttccctcgtctgagagtcactgaacctgctacaa 126
            | || || || ||| ||||||| || ||||||||  | || |||||||||||||||||  
Sbjct: 2456 aggctcttaacgctctacttagtaacttccctcgcttaagggtcactgaacctgctacct 2515

                                                                        
Query: 127  tatgcattccgcatcttgtaacatcccttaaaactggttctgaagcaactcaagaagcag 186
            |||||||||| |||||||||||||| || || ||||||||||| ||||| || ||||| |
Sbjct: 2516 tatgcattcctcatcttgtaacatctctcaagactggttctgaggcaacccaggaagctg 2575

                                                                        
Query: 187  cactggattcactatatctgctaagacaagcatggtcggcttgcccagcggaagtgttta 246
            ||||||| ||||| ||||| || ||||||||||||   |||||  |||| ||| | ||||
Sbjct: 2576 cactggactcactgtatcttcttagacaagcatggggagcttgtgcagcagaaatattta 2635

                                                                        
Query: 247  aagctcaatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctg 306
            ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2636 aagctcagtcagttgctgcctcagaggctattccgctacttcagtacttgatacagtctg 2695

                                                                        
Query: 307  gcccaccacggtttcaagagaaggcagagttgctacttcagtgcttgcctgggacactta 366
            ||||||| ||||| ||||| |||||||| ||||| ||||||||||||||||| ||  | |
Sbjct: 2696 gcccacctcggttccaagaaaaggcagaattgcttcttcagtgcttgcctggtactttga 2755

                                                                        
Query: 367  cagttactataaaacgtggcaacaatctgaggcaatcagtgggaaatgctagcgcattct 426
            ||||||||||||| |||||||||||||| ||||||||||| |||||| |||||||||| |
Sbjct: 2756 cagttactataaagcgtggcaacaatctaaggcaatcagttggaaatcctagcgcatttt 2815

                                                                        
Query: 427  gcaagcttactcttggaaataatccagcaaggctgacaaagattgtctcgactggtgagt 486
            |||||||||||||||||||||||||  |||||||||||||||||||||| |||||||   
Sbjct: 2816 gcaagcttactcttggaaataatccgccaaggctgacaaagattgtctcaactggtgcaa 2875

                                                       
Query: 487  cacctgaatgggatgaggccttcgcatgggcttttgacagccc 529
            |||||||||||||||| ||||| || ||||| |||||||||||
Sbjct: 2876 cacctgaatgggatgaagcctttgcgtgggcgtttgacagccc 2918



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  466 bits (235), Expect = e-128
 Identities = 394/447 (88%)
 Strand = Plus / Minus

                                                                           
Query: 21      gagaaggatatatgggcatctgggagtgccaatgaggagtatcttaaagcgctcaatgct 80
               |||||||| |||||||||||||||||||| ||||||||||||||||| || || || |||
Sbjct: 6414492 gagaaggacatatgggcatctgggagtgctaatgaggagtatcttaaggctcttaacgct 6414433

                                                                           
Query: 81      ttacttagcaatttccctcgtctgagagtcactgaacctgctacaatatgcattccgcat 140
                ||||||| || ||||||||  | || |||||||||||||||||  |||||||||| |||
Sbjct: 6414432 ctacttagtaacttccctcgcttaagggtcactgaacctgctaccttatgcattcctcat 6414373

                                                                           
Query: 141     cttgtaacatcccttaaaactggttctgaagcaactcaagaagcagcactggattcacta 200
               ||||||||||| || || ||||||||||| ||||| || ||||| |||||||| ||||| 
Sbjct: 6414372 cttgtaacatctctcaagactggttctgaggcaacccaggaagctgcactggactcactg 6414313

                                                                           
Query: 201     tatctgctaagacaagcatggtcggcttgcccagcggaagtgtttaaagctcaatcagtt 260
               ||||| || ||||||||||||   |||||  |||| ||| | ||||||||||| ||||||
Sbjct: 6414312 tatcttcttagacaagcatggggagcttgtgcagcagaaatatttaaagctcagtcagtt 6414253

                                                                           
Query: 261     gctgcctcagaggctattcctctacttcagtacttgatacagtctggcccaccacggttt 320
               |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 6414252 gctgcctcagaggctattccgctacttcagtacttgatacagtctggcccacctcggttc 6414193

                                                                           
Query: 321     caagagaaggcagagttgctacttcagtgcttgcctgggacacttacagttactataaaa 380
               ||||| |||||||| ||||| ||||||||||||||||| ||  | |||||||||||||| 
Sbjct: 6414192 caagaaaaggcagaattgcttcttcagtgcttgcctggtactttgacagttactataaag 6414133

                                                                           
Query: 381     cgtggcaacaatctgaggcaatcagtgggaaatgctagcgcattctgcaagcttactctt 440
               |||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 6414132 cgtggcaacaatctaaggcaatcagttggaaatcctagcgcattttgcaagcttactctt 6414073

                                          
Query: 441     ggaaataatccagcaaggctgacaaag 467
               |||||||||||  ||||||||||||||
Sbjct: 6414072 ggaaataatccgccaaggctgacaaag 6414046



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                           
Query: 466     agattgtctcgactggtgagtcacctgaatgggatgaggccttcgcatgggcttttgaca 525
               |||||||||| |||||||   |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 6412973 agattgtctcaactggtgcaacacctgaatgggatgaagcctttgcgtgggcgtttgaca 6412914

                   
Query: 526     gccc 529
               ||||
Sbjct: 6412913 gccc 6412910



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>dbj|AP005545.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0638H11
          Length = 162746

 Score =  466 bits (235), Expect = e-128
 Identities = 394/447 (88%)
 Strand = Plus / Minus

                                                                         
Query: 21    gagaaggatatatgggcatctgggagtgccaatgaggagtatcttaaagcgctcaatgct 80
             |||||||| |||||||||||||||||||| ||||||||||||||||| || || || |||
Sbjct: 81436 gagaaggacatatgggcatctgggagtgctaatgaggagtatcttaaggctcttaacgct 81377

                                                                         
Query: 81    ttacttagcaatttccctcgtctgagagtcactgaacctgctacaatatgcattccgcat 140
              ||||||| || ||||||||  | || |||||||||||||||||  |||||||||| |||
Sbjct: 81376 ctacttagtaacttccctcgcttaagggtcactgaacctgctaccttatgcattcctcat 81317

                                                                         
Query: 141   cttgtaacatcccttaaaactggttctgaagcaactcaagaagcagcactggattcacta 200
             ||||||||||| || || ||||||||||| ||||| || ||||| |||||||| ||||| 
Sbjct: 81316 cttgtaacatctctcaagactggttctgaggcaacccaggaagctgcactggactcactg 81257

                                                                         
Query: 201   tatctgctaagacaagcatggtcggcttgcccagcggaagtgtttaaagctcaatcagtt 260
             ||||| || ||||||||||||   |||||  |||| ||| | ||||||||||| ||||||
Sbjct: 81256 tatcttcttagacaagcatggggagcttgtgcagcagaaatatttaaagctcagtcagtt 81197

                                                                         
Query: 261   gctgcctcagaggctattcctctacttcagtacttgatacagtctggcccaccacggttt 320
             |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| 
Sbjct: 81196 gctgcctcagaggctattccgctacttcagtacttgatacagtctggcccacctcggttc 81137

                                                                         
Query: 321   caagagaaggcagagttgctacttcagtgcttgcctgggacacttacagttactataaaa 380
             ||||| |||||||| ||||| ||||||||||||||||| ||  | |||||||||||||| 
Sbjct: 81136 caagaaaaggcagaattgcttcttcagtgcttgcctggtactttgacagttactataaag 81077

                                                                         
Query: 381   cgtggcaacaatctgaggcaatcagtgggaaatgctagcgcattctgcaagcttactctt 440
             |||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 81076 cgtggcaacaatctaaggcaatcagttggaaatcctagcgcattttgcaagcttactctt 81017

                                        
Query: 441   ggaaataatccagcaaggctgacaaag 467
             |||||||||||  ||||||||||||||
Sbjct: 81016 ggaaataatccgccaaggctgacaaag 80990



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                         
Query: 466   agattgtctcgactggtgagtcacctgaatgggatgaggccttcgcatgggcttttgaca 525
             |||||||||| |||||||   |||||||||||||||| ||||| || ||||| |||||||
Sbjct: 79917 agattgtctcaactggtgcaacacctgaatgggatgaagcctttgcgtgggcgtttgaca 79858

                 
Query: 526   gccc 529
             ||||
Sbjct: 79857 gccc 79854



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>emb|AJ630655.1| Cicer arietinum partial mRNA for C2 domain-containing protein (ORF
           313-1)
          Length = 1065

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 120/146 (82%)
 Strand = Plus / Plus

                                                                       
Query: 192 gattcactatatctgctaagacaagcatggtcggcttgcccagcggaagtgtttaaagct 251
           |||||||| | |||||| |||||||| ||||| |||||||| || ||||| |  | ||||
Sbjct: 189 gattcactttttctgctcagacaagcttggtcagcttgccctgctgaagtttcaagagct 248

                                                                       
Query: 252 caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
           || ||  |||| ||  |||| ||||||||| | || |||||||| || ||||||||||| 
Sbjct: 249 cagtcgattgcagctgcagacgctattcctttcctgcagtacttaatccagtctggcccg 308

                                     
Query: 312 ccacggtttcaagagaaggcagagtt 337
           || |||||||||||||| ||||||||
Sbjct: 309 cctcggtttcaagagaaagcagagtt 334



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>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence
          Length = 126187

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                         
Query: 210   agacaagcatggtcggcttgcccagcggaagtgtttaaagctcaatcagttgctgcctca 269
             |||||||| ||||| || ||||| || ||||| |  | |||||| ||| |||| ||  ||
Sbjct: 96332 agacaagcttggtcagcatgccctgctgaagtctcaagagctcagtcaattgcagctgca 96391

                                                                         
Query: 270   gaggctattcctctacttcagtacttgatacagtctggcccaccacggtttcaagagaag 329
             || ||||||||| | || |||||||| || |||||||||||||| || ||||| ||||||
Sbjct: 96392 gatgctattccttttctgcagtacttaatccagtctggcccacctcgatttcaggagaag 96451

               
Query: 330   gc 331
             ||
Sbjct: 96452 gc 96453



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>ref|NM_127781.4| Arabidopsis thaliana unknown protein AT2G22125 mRNA, complete cds
          Length = 6941

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                        
Query: 252  caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
            ||||||||||||||  |||| || || || |||||||||||| | || || || || |||
Sbjct: 6176 caatcagttgctgctgcagacgccatccccctacttcagtacctaatccaatcaggtcca 6235

                             
Query: 312  ccacggtttcaagagaa 328
            |||||||| || |||||
Sbjct: 6236 ccacggttccaggagaa 6252



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>gb|BT010988.1| Arabidopsis thaliana At2g22125 mRNA, complete cds
          Length = 930

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 252 caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
           ||||||||||||||  |||| || || || |||||||||||| | || || || || |||
Sbjct: 460 caatcagttgctgctgcagacgccatccccctacttcagtacctaatccaatcaggtcca 519

                            
Query: 312 ccacggtttcaagagaa 328
           |||||||| || |||||
Sbjct: 520 ccacggttccaggagaa 536



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>gb|BT010720.1| Arabidopsis thaliana At2g22125 mRNA, complete cds
          Length = 1236

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 252 caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
           ||||||||||||||  |||| || || || |||||||||||| | || || || || |||
Sbjct: 501 caatcagttgctgctgcagacgccatccccctacttcagtacctaatccaatcaggtcca 560

                            
Query: 312 ccacggtttcaagagaa 328
           |||||||| || |||||
Sbjct: 561 ccacggttccaggagaa 577



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>gb|AC007232.6| Arabidopsis thaliana chromosome 2 clone T16B14 map mi238, complete
            sequence
          Length = 45943

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 252  caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
            ||||||||||||||  |||| || || || |||||||||||| | || || || || |||
Sbjct: 3576 caatcagttgctgctgcagacgccatccccctacttcagtacctaatccaatcaggtcca 3517

                             
Query: 312  ccacggtttcaagagaa 328
            |||||||| || |||||
Sbjct: 3516 ccacggttccaggagaa 3500



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>gb|AC007168.5| Arabidopsis thaliana chromosome 2 clone T26C19 map mi238, complete
             sequence
          Length = 81236

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                         
Query: 252   caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
             ||||||||||||||  |||| || || || |||||||||||| | || || || || |||
Sbjct: 79463 caatcagttgctgctgcagacgccatccccctacttcagtacctaatccaatcaggtcca 79404

                              
Query: 312   ccacggtttcaagagaa 328
             |||||||| || |||||
Sbjct: 79403 ccacggttccaggagaa 79387



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>emb|BX821282.1|CNS0A8BO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZG02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1199

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 252 caatcagttgctgcctcagaggctattcctctacttcagtacttgatacagtctggccca 311
           ||||||||||||||  |||| || || || |||||||||||| | || || || || |||
Sbjct: 553 caatcagttgctgctgcagacgccatccccctacttcagtacctaatccaatcaggtcca 612

                            
Query: 312 ccacggtttcaagagaa 328
           |||||||| || |||||
Sbjct: 613 ccacggttccaggagaa 629



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>gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosome 14, complete
             sequence
          Length = 196744

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    atatgggcatctgggagtgc 49
             ||||||||||||||||||||
Sbjct: 29730 atatgggcatctgggagtgc 29749



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>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence
          Length = 199240

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 166   ctgaagcaactcaagaagcagcactgga 193
             ||||||| |||||||||||||| |||||
Sbjct: 99795 ctgaagccactcaagaagcagctctgga 99768



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>emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chromosome 13q21.1-21.3
             Contains GSSs and STSs, complete sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 453   gcaaggctgacaaagattgt 472
             ||||||||||||||||||||
Sbjct: 23057 gcaaggctgacaaagattgt 23038



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>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the
             gene for a novel protein similar to ribosomal protein S8
             (Rps8) and a CpG island, complete sequence
          Length = 200125

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   tgtaacatcccttaaaactg 162
             ||||||||||||||||||||
Sbjct: 34783 tgtaacatcccttaaaactg 34764



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>gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 map 13, complete sequence
          Length = 232472

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 166   ctgaagcaactcaagaagcagcactgga 193
             ||||||| |||||||||||||| |||||
Sbjct: 22054 ctgaagccactcaagaagcagctctgga 22027



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>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   cacttacagttactataaaa 380
             ||||||||||||||||||||
Sbjct: 53549 cacttacagttactataaaa 53568



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>emb|AL365294.4|CNS05TF4 Human chromosome 14 DNA sequence BAC R-746E9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 188478

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 450    ccagcaaggctgacaaagat 469
              ||||||||||||||||||||
Sbjct: 160845 ccagcaaggctgacaaagat 160826



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>emb|AL132876.4|CEY105E8A Caenorhabditis elegans YAC Y105E8A, complete sequence
          Length = 277607

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  aagaagcagcactggattca 197
            ||||||||||||||||||||
Sbjct: 3081 aagaagcagcactggattca 3100



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>gb|AC006256.1|AC006256 Homo sapiens chromosome 18, clone hRPK.12_J_19, complete sequence
          Length = 157803

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   ccagcaaggctgacaaagat 469
             ||||||||||||||||||||
Sbjct: 60466 ccagcaaggctgacaaagat 60485



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>gb|AF027153.1|AF027153 Homo sapiens sodium/myo-inositol cotransporter (SLC5A3) gene, complete
             cds
          Length = 23213

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   acatcccttaaaactggttctgaa 170
             ||||||||||||| ||||||||||
Sbjct: 11217 acatcccttaaaaatggttctgaa 11194



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>emb|AJ130806.1|PRE130806 Pinnixa retinens partial mitochondrial 16S rRNA gene, isolate TX1
          Length = 517

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 360 acacttacagttactataaa 379
           ||||||||||||||||||||
Sbjct: 321 acacttacagttactataaa 302



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>emb|AL356016.2|CNS05TD6 Human chromosome 14 DNA sequence BAC R-96H16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 156292

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    ccagcaaggctgacaaagat 469
              ||||||||||||||||||||
Sbjct: 139221 ccagcaaggctgacaaagat 139240


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,115,152
Number of Sequences: 3902068
Number of extensions: 4115152
Number of successful extensions: 67511
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67440
Number of HSP's gapped (non-prelim): 71
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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