ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63f08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZHX2_PONPY (Q5R7F2) Zinc fingers and homeoboxes protein 2 (Zinc ... 31 2.4
2GALR3_MOUSE (O88853) Galanin receptor type 3 (GAL3-R) (GALR3) 30 4.1
3FTSK_LEPIN (Q8F1W7) DNA translocase ftsK 30 5.4
4FTSK_LEPIC (Q72TG0) DNA translocase ftsK 30 5.4
5ZFP92_MOUSE (Q62396) Zinc finger protein 92 (Zfp-92) 30 7.0
6DVA1_DICVI (Q24702) DVA-1 polyprotein precursor (Antigen 1) (All... 30 7.0
7NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exch... 30 7.0
8K1199_MOUSE (Q8BI06) Protein KIAA1199 homolog precursor (Protein... 29 9.2
9PP2B1_CRYNV (O42773) Serine/threonine-protein phosphatase 2B cat... 29 9.2

>ZHX2_PONPY (Q5R7F2) Zinc fingers and homeoboxes protein 2 (Zinc finger and|
           homeodomain protein 2)
          Length = 837

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -3

Query: 388 MIGMCVVYMAPMTPGTPKDLSKPSLNLPAAASSGHWRKRGMRTDLMAPQTSRTSLWHVEM 209
           ++G   + + P+T G+      P + L  A  + H +KR + T   AP+  R  +  V  
Sbjct: 370 ILGQTSLVLTPVTSGSTTVSCSP-ITLAVAGVTNHGQKRPLVTPQAAPEPKRPHIAQVPE 428

Query: 208 PRPK 197
           P PK
Sbjct: 429 PPPK 432



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>GALR3_MOUSE (O88853) Galanin receptor type 3 (GAL3-R) (GALR3)|
          Length = 370

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 18/34 (52%), Positives = 21/34 (61%)
 Frame = +2

Query: 335 LWRSGRHRSHVHHAHPYHRAQDLRRRLLQPSAHG 436
           LW  G HR H HH H  HRA  LRR  +QP++ G
Sbjct: 305 LWPCG-HRRHRHHHHRLHRA--LRR--VQPASSG 333



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>FTSK_LEPIN (Q8F1W7) DNA translocase ftsK|
          Length = 948

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +3

Query: 300 AAGRFKEGFERSFGVPG-VIGAMYTTHIPIIAPKISVAAYFNRRHTERNQ-KTSYSIT 467
           A  ++KEGF+  FG  G  +G+++ + +     K SV  + +    E+N    SYS++
Sbjct: 176 AGAKYKEGFKSGFGKRGESLGSLFQSAVEKFQKKESVPPWISTNTNEKNSLNQSYSLS 233



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>FTSK_LEPIC (Q72TG0) DNA translocase ftsK|
          Length = 948

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +3

Query: 300 AAGRFKEGFERSFGVPG-VIGAMYTTHIPIIAPKISVAAYFNRRHTERNQ-KTSYSIT 467
           A  ++KEGF+  FG  G  +G+++ + +     K SV  + +    E+N    SYS++
Sbjct: 176 AGAKYKEGFKSGFGKRGESLGSLFQSAVEKFQKKESVPPWISTNTNEKNSLNQSYSLS 233



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>ZFP92_MOUSE (Q62396) Zinc finger protein 92 (Zfp-92)|
          Length = 488

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 596 VHHTRRGALVQHGFLEHLIVWHGARPADADVGEGAVRTDHPLE 468
           + H  RG   Q   LEHL   HG +P +A  GEG+     P++
Sbjct: 364 LQHRTRGKGFQRKLLEHLRDLHGQQPQEA--GEGSSAEPQPID 404



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>DVA1_DICVI (Q24702) DVA-1 polyprotein precursor (Antigen 1) (Allergen 1)|
           (Nematode polyprotein allergen DVA-1) (NPA DVA-1)
           [Contains: DVA-1 unit A; DVA-1 unit B; DVA-1 unit C;
           DVA-1 unit D; DVA-1 unit E; DVA-1 unit F; DVA-1 unit G;
           DVA-1 unit H; DVA-1 un
          Length = 1557

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 329 KILWRS-GRHRSHVHHAHPYHRAQDLRRR 412
           KI +R  G H SH H AH +HR   +RRR
Sbjct: 391 KIWYRDHGDHNSHKHGAHHHHRHLAVRRR 419



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>NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4)|
           (NHE-4)
          Length = 529

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +3

Query: 324 FERSFGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSY 458
           F  + GV GVI A+           +SV   F  RHTERN+  ++
Sbjct: 335 FGGTLGVSGVITALVLLGRAAFVFPLSVLTNFMNRHTERNESITF 379



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>K1199_MOUSE (Q8BI06) Protein KIAA1199 homolog precursor (Protein 12H19.01.T7)|
          Length = 1361

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
 Frame = +3

Query: 306 GRFKEG---FERSFGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITLQG 476
           G  +EG   FERS+G  GVI       + +I  ++    + +R  T R++K S  +    
Sbjct: 171 GGMQEGGYFFERSWGHRGVI-------VHVIDAELGTVVHSDRFDTYRSKKESERLVQYL 223

Query: 477 VVGPDRAFTDVCIGWPGSMPDDQVLEKSM 563
              PD     V +   GS   D    K+M
Sbjct: 224 NAVPDGRILSVAVNDEGSRNLDDTARKAM 252



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>PP2B1_CRYNV (O42773) Serine/threonine-protein phosphatase 2B catalytic subunit|
           A1 (EC 3.1.3.16) (Calcineurin A1)
          Length = 639

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 385 IGMCVVYMAPMTPGTPKDLSKPSLNLP--AAASSGHWRKRGMRTDLMAPQTSRTSL 224
           I   +   +P +PGTP   + PS+  P   A   GH R+  + T   +P T R SL
Sbjct: 548 ISSAIASGSPGSPGTP---TSPSIGGPPLTAWRPGHGRRTSLGTTKTSPSTRRRSL 600


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,286,544
Number of Sequences: 219361
Number of extensions: 1557668
Number of successful extensions: 5751
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5696
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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