Clone Name | bah63f08 |
---|---|
Clone Library Name | barley_pub |
>ZHX2_PONPY (Q5R7F2) Zinc fingers and homeoboxes protein 2 (Zinc finger and| homeodomain protein 2) Length = 837 Score = 31.2 bits (69), Expect = 2.4 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = -3 Query: 388 MIGMCVVYMAPMTPGTPKDLSKPSLNLPAAASSGHWRKRGMRTDLMAPQTSRTSLWHVEM 209 ++G + + P+T G+ P + L A + H +KR + T AP+ R + V Sbjct: 370 ILGQTSLVLTPVTSGSTTVSCSP-ITLAVAGVTNHGQKRPLVTPQAAPEPKRPHIAQVPE 428 Query: 208 PRPK 197 P PK Sbjct: 429 PPPK 432
>GALR3_MOUSE (O88853) Galanin receptor type 3 (GAL3-R) (GALR3)| Length = 370 Score = 30.4 bits (67), Expect = 4.1 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = +2 Query: 335 LWRSGRHRSHVHHAHPYHRAQDLRRRLLQPSAHG 436 LW G HR H HH H HRA LRR +QP++ G Sbjct: 305 LWPCG-HRRHRHHHHRLHRA--LRR--VQPASSG 333
>FTSK_LEPIN (Q8F1W7) DNA translocase ftsK| Length = 948 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +3 Query: 300 AAGRFKEGFERSFGVPG-VIGAMYTTHIPIIAPKISVAAYFNRRHTERNQ-KTSYSIT 467 A ++KEGF+ FG G +G+++ + + K SV + + E+N SYS++ Sbjct: 176 AGAKYKEGFKSGFGKRGESLGSLFQSAVEKFQKKESVPPWISTNTNEKNSLNQSYSLS 233
>FTSK_LEPIC (Q72TG0) DNA translocase ftsK| Length = 948 Score = 30.0 bits (66), Expect = 5.4 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +3 Query: 300 AAGRFKEGFERSFGVPG-VIGAMYTTHIPIIAPKISVAAYFNRRHTERNQ-KTSYSIT 467 A ++KEGF+ FG G +G+++ + + K SV + + E+N SYS++ Sbjct: 176 AGAKYKEGFKSGFGKRGESLGSLFQSAVEKFQKKESVPPWISTNTNEKNSLNQSYSLS 233
>ZFP92_MOUSE (Q62396) Zinc finger protein 92 (Zfp-92)| Length = 488 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -2 Query: 596 VHHTRRGALVQHGFLEHLIVWHGARPADADVGEGAVRTDHPLE 468 + H RG Q LEHL HG +P +A GEG+ P++ Sbjct: 364 LQHRTRGKGFQRKLLEHLRDLHGQQPQEA--GEGSSAEPQPID 404
>DVA1_DICVI (Q24702) DVA-1 polyprotein precursor (Antigen 1) (Allergen 1)| (Nematode polyprotein allergen DVA-1) (NPA DVA-1) [Contains: DVA-1 unit A; DVA-1 unit B; DVA-1 unit C; DVA-1 unit D; DVA-1 unit E; DVA-1 unit F; DVA-1 unit G; DVA-1 unit H; DVA-1 un Length = 1557 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +2 Query: 329 KILWRS-GRHRSHVHHAHPYHRAQDLRRR 412 KI +R G H SH H AH +HR +RRR Sbjct: 391 KIWYRDHGDHNSHKHGAHHHHRHLAVRRR 419
>NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4)| (NHE-4) Length = 529 Score = 29.6 bits (65), Expect = 7.0 Identities = 16/45 (35%), Positives = 22/45 (48%) Frame = +3 Query: 324 FERSFGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSY 458 F + GV GVI A+ +SV F RHTERN+ ++ Sbjct: 335 FGGTLGVSGVITALVLLGRAAFVFPLSVLTNFMNRHTERNESITF 379
>K1199_MOUSE (Q8BI06) Protein KIAA1199 homolog precursor (Protein 12H19.01.T7)| Length = 1361 Score = 29.3 bits (64), Expect = 9.2 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Frame = +3 Query: 306 GRFKEG---FERSFGVPGVIGAMYTTHIPIIAPKISVAAYFNRRHTERNQKTSYSITLQG 476 G +EG FERS+G GVI + +I ++ + +R T R++K S + Sbjct: 171 GGMQEGGYFFERSWGHRGVI-------VHVIDAELGTVVHSDRFDTYRSKKESERLVQYL 223 Query: 477 VVGPDRAFTDVCIGWPGSMPDDQVLEKSM 563 PD V + GS D K+M Sbjct: 224 NAVPDGRILSVAVNDEGSRNLDDTARKAM 252
>PP2B1_CRYNV (O42773) Serine/threonine-protein phosphatase 2B catalytic subunit| A1 (EC 3.1.3.16) (Calcineurin A1) Length = 639 Score = 29.3 bits (64), Expect = 9.2 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -3 Query: 385 IGMCVVYMAPMTPGTPKDLSKPSLNLP--AAASSGHWRKRGMRTDLMAPQTSRTSL 224 I + +P +PGTP + PS+ P A GH R+ + T +P T R SL Sbjct: 548 ISSAIASGSPGSPGTP---TSPSIGGPPLTAWRPGHGRRTSLGTTKTSPSTRRRSL 600 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,286,544 Number of Sequences: 219361 Number of extensions: 1557668 Number of successful extensions: 5751 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5278 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5696 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)