ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62p23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463712.1| Oryza sativa (japonica cultivar-group), predic... 359 7e-96
2dbj|AK111411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 7e-96
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
4dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
5gb|AF003692.1|AF003692 Plexaura homomalla 8R-lipoxygenase-allene... 48 0.036
6gb|AC087256.9| Homo sapiens 12q BAC RP11-443N24 (Roswell Park Ca... 44 0.56
7gb|AC021868.17|AC021868 Homo sapiens 12 BAC RP11-679N16 (Roswell... 44 0.56
8gb|AC019209.3|AC019209 Homo sapiens BAC clone RP11-443N24 from S... 44 0.56
9ref|NM_119234.2| Arabidopsis thaliana endonuclease/ nuclease/ nu... 42 2.2
10ref|NM_129027.2| Arabidopsis thaliana unknown protein AT2G34730 ... 42 2.2
11gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosom... 42 2.2
12gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome... 42 2.2
13gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, comp... 42 2.2
14gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 ma... 42 2.2
15dbj|AB177892.1| Arabidopsis thaliana AtMus81 mRNA for endonuclea... 42 2.2
16gb|AC153933.3| Mus musculus 10 BAC RP24-282I24 (Roswell Park Can... 42 2.2
17gb|AC149868.2| Mus musculus BAC clone RP23-226I6 from 7, complet... 42 2.2
18gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complet... 42 2.2
19dbj|AB028894.1| Mus musculus Rps11, U35 genes for ribosomal prot... 42 2.2
20gb|AC008221.5| Drosophila melanogaster clone BACR30B13, complete... 40 8.8
21ref|XM_424927.1| PREDICTED: Gallus gallus doublesex and mab-3 re... 40 8.8
22gb|AC113540.12| Mus musculus chromosome 17, clone RP23-158F13, c... 40 8.8
23gb|AC131920.7| Mus musculus chromosome 14, clone RP23-450N9, com... 40 8.8
24emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 ... 40 8.8
25gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosom... 40 8.8
26gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome... 40 8.8
27ref|XM_735722.1| Plasmodium chabaudi chabaudi Pc-fam-4 protein (... 40 8.8
28emb|AL606504.14| Human DNA sequence from clone RP11-358K2 on chr... 40 8.8
29gb|AC101711.7| Mus musculus, clone RP23-279K17, complete sequence 40 8.8
30gb|AY149028.1| Plasmodium chabaudi chabaudi strain AS clone YAC1... 40 8.8
31emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chr... 40 8.8
32gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
33tpg|BK002932.1| TPA: TPA_inf: Drosophila melanogaster HDC16559 (... 40 8.8
34dbj|AB188528.1| Clavularia viridis mRNA for putative 8-lipoxygen... 40 8.8
35gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 gen... 40 8.8
36gb|AC087638.7| Homo sapiens chromosome 15, clone RP11-655F8, com... 40 8.8
37gb|AC010809.10| Homo sapiens, clone RP11-3D4, complete sequence 40 8.8
38gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 8.8
39dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
40gb|AC108202.3| Homo sapiens BAC clone RP11-20M7 from 4, complete... 40 8.8
41ref|XM_318459.2| Anopheles gambiae str. PEST ENSANGP00000002816 ... 40 8.8
42gb|AE003777.3| Drosophila melanogaster chromosome 3R, section 11... 40 8.8
43gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, co... 40 8.8
44emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on ch... 40 8.8
45gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
46gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 8.8
47gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, comple... 40 8.8
48gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complet... 40 8.8
49emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in ... 40 8.8
50dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 8.8
51emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on ch... 40 8.8
52gb|U20611.1|MMU20611 Mus musculus thioredoxin-dependent peroxide... 40 8.8
53dbj|AB001823.1| Dendrolimus spectabilis Fib-P25 mRNA for fibroin... 40 8.8 
>ref|XM_463712.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1983

 Score =  359 bits (181), Expect = 7e-96
 Identities = 492/593 (82%), Gaps = 2/593 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gagtatgttcttgacttc-ttgttgaaaggaaaagtgtcacagatttagttagctcaatt 84
            |||||||||||||| ||| ||||||||||||| | |||  |||||||   ||| ||||| 
Sbjct: 1378 gagtatgttcttgatttcattgttgaaaggaagaatgttgcagatttgtgtagttcaatc 1437

                                                                        
Query: 85   agagacagcaggtacaaagatcagaaattaaggctaaagaaatgtggactaagaaagctg 144
            | ||||| | | |||||||||||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1438 acagacaaccgatacaaagatcagaagttaaggctcaagaaatgtggcctaaggaagctg 1497

                                                                        
Query: 145  atatatctggttgaaggtgatccaaaccctttaggcgcatcagagagcatcaaaacagcc 204
            |||||||||||||||||||||||||||||| | |   ||||||| || |||||||| |||
Sbjct: 1498 atatatctggttgaaggtgatccaaaccctcttgatacatcagaaaggatcaaaactgcc 1557

                                                                        
Query: 205  tgcttcacaagtgagattcttgaaggatttgatgttcaaagaaccaccgggtattctgat 264
            |||||||| | ||| |||||||||||||||||||| || |||||| | |||||| |||| 
Sbjct: 1558 tgcttcaccactgaaattcttgaaggatttgatgtccagagaacccctgggtatgctgag 1617

                                                                        
Query: 265  actgaaaggacatatggccacctgacactttcgataattgattactacagcatgaaattc 324
            |||| ||||||||||||| |||| || | ||| ||||  || ||||||||||   | || 
Sbjct: 1618 actgtaaggacatatggcaaccttactcattcaataaccgaatactacagcacacacttt 1677

                                                                        
Query: 325  tcaatcggtgctaacactagtcgagtttgcttaacttatgacgagtttgtgaagaagtgt 384
            || |  |||||||| |||  || ||||||| | || ||||| ||||||  ||||||||||
Sbjct: 1678 tctactggtgctaatacttctcaagtttgcctgacctatgatgagtttacgaagaagtgt 1737

                                                                        
Query: 385  tgtgaccccaagaagttaactgtgagcgacatattcgcccttcaacttatgcaggtacca 444
              |||||  |||||| |||||||||| ||  ||||||||||||||||||||||||| |||
Sbjct: 1738 gatgaccttaagaagataactgtgagtgatgtattcgcccttcaacttatgcaggtgcca 1797

                                                                        
Query: 445  caggtgacagaagaaactgcaattgcagttatagagctctacccgacacttgtctcactt 504
            || |||||||||||| ||||| |||| || |||| |||||| || || ||| ||||||||
Sbjct: 1798 caagtgacagaagaagctgcacttgctgtgatagggctctatccaactcttttctcactt 1857

                                                                        
Query: 505  gctcgggcatactccatgcttgatggcgatagccctgcccaagagaagatgctgaacatg 564
            |||  ||| ||||| ||||||||||| |||| || |||||||||||||||| |||| |  
Sbjct: 1858 gctaaggcgtactctatgcttgatggtgatacccatgcccaagagaagatgttgaagaac 1917

                                                                 
Query: 565  aagagcaaggatggtgaacgcaggggctagcagaaatatcttcaagcttgtct 617
            |||||| | | || | || ||||||||||||||||| || |||||||||||||
Sbjct: 1918 aagagc-acgctgataaatgcaggggctagcagaaacatattcaagcttgtct 1969
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>dbj|AK111411.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-F04, full
            insert sequence
          Length = 2441

 Score =  359 bits (181), Expect = 7e-96
 Identities = 492/593 (82%), Gaps = 2/593 (0%)
 Strand = Plus / Plus

                                                                        
Query: 26   gagtatgttcttgacttc-ttgttgaaaggaaaagtgtcacagatttagttagctcaatt 84
            |||||||||||||| ||| ||||||||||||| | |||  |||||||   ||| ||||| 
Sbjct: 1499 gagtatgttcttgatttcattgttgaaaggaagaatgttgcagatttgtgtagttcaatc 1558

                                                                        
Query: 85   agagacagcaggtacaaagatcagaaattaaggctaaagaaatgtggactaagaaagctg 144
            | ||||| | | |||||||||||||| |||||||| ||||||||||| ||||| ||||||
Sbjct: 1559 acagacaaccgatacaaagatcagaagttaaggctcaagaaatgtggcctaaggaagctg 1618

                                                                        
Query: 145  atatatctggttgaaggtgatccaaaccctttaggcgcatcagagagcatcaaaacagcc 204
            |||||||||||||||||||||||||||||| | |   ||||||| || |||||||| |||
Sbjct: 1619 atatatctggttgaaggtgatccaaaccctcttgatacatcagaaaggatcaaaactgcc 1678

                                                                        
Query: 205  tgcttcacaagtgagattcttgaaggatttgatgttcaaagaaccaccgggtattctgat 264
            |||||||| | ||| |||||||||||||||||||| || |||||| | |||||| |||| 
Sbjct: 1679 tgcttcaccactgaaattcttgaaggatttgatgtccagagaacccctgggtatgctgag 1738

                                                                        
Query: 265  actgaaaggacatatggccacctgacactttcgataattgattactacagcatgaaattc 324
            |||| ||||||||||||| |||| || | ||| ||||  || ||||||||||   | || 
Sbjct: 1739 actgtaaggacatatggcaaccttactcattcaataaccgaatactacagcacacacttt 1798

                                                                        
Query: 325  tcaatcggtgctaacactagtcgagtttgcttaacttatgacgagtttgtgaagaagtgt 384
            || |  |||||||| |||  || ||||||| | || ||||| ||||||  ||||||||||
Sbjct: 1799 tctactggtgctaatacttctcaagtttgcctgacctatgatgagtttacgaagaagtgt 1858

                                                                        
Query: 385  tgtgaccccaagaagttaactgtgagcgacatattcgcccttcaacttatgcaggtacca 444
              |||||  |||||| |||||||||| ||  ||||||||||||||||||||||||| |||
Sbjct: 1859 gatgaccttaagaagataactgtgagtgatgtattcgcccttcaacttatgcaggtgcca 1918

                                                                        
Query: 445  caggtgacagaagaaactgcaattgcagttatagagctctacccgacacttgtctcactt 504
            || |||||||||||| ||||| |||| || |||| |||||| || || ||| ||||||||
Sbjct: 1919 caagtgacagaagaagctgcacttgctgtgatagggctctatccaactcttttctcactt 1978

                                                                        
Query: 505  gctcgggcatactccatgcttgatggcgatagccctgcccaagagaagatgctgaacatg 564
            |||  ||| ||||| ||||||||||| |||| || |||||||||||||||| |||| |  
Sbjct: 1979 gctaaggcgtactctatgcttgatggtgatacccatgcccaagagaagatgttgaagaac 2038

                                                                 
Query: 565  aagagcaaggatggtgaacgcaggggctagcagaaatatcttcaagcttgtct 617
            |||||| | | || | || ||||||||||||||||| || |||||||||||||
Sbjct: 2039 aagagc-acgctgataaatgcaggggctagcagaaacatattcaagcttgtct 2090
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  123 bits (62), Expect = 8e-25
 Identities = 194/238 (81%)
 Strand = Plus / Plus

                                                                            
Query: 204      ctgcttcacaagtgagattcttgaaggatttgatgttcaaagaaccaccgggtattctga 263
                ||||||||| | ||| |||||||||||||||||||| || |||||| | |||||| ||||
Sbjct: 41689978 ctgcttcaccactgaaattcttgaaggatttgatgtccagagaacccctgggtatgctga 41690037

                                                                            
Query: 264      tactgaaaggacatatggccacctgacactttcgataattgattactacagcatgaaatt 323
                 |||| ||||||||||||| |||| || | ||| ||||  || ||||||||||   | ||
Sbjct: 41690038 gactgtaaggacatatggcaaccttactcattcaataaccgaatactacagcacacactt 41690097

                                                                            
Query: 324      ctcaatcggtgctaacactagtcgagtttgcttaacttatgacgagtttgtgaagaagtg 383
                 || |  |||||||| |||  || ||||||| | || ||||| ||||||  |||||||||
Sbjct: 41690098 ttctactggtgctaatacttctcaagtttgcctgacctatgatgagtttacgaagaagtg 41690157

                                                                          
Query: 384      ttgtgaccccaagaagttaactgtgagcgacatattcgcccttcaacttatgcaggta 441
                |  |||||  |||||| |||||||||| ||  ||||||||||||||||||||||||||
Sbjct: 41690158 tgatgaccttaagaagataactgtgagtgatgtattcgcccttcaacttatgcaggta 41690215



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                     
Query: 122      agaaatgtggactaagaaagctgatatatctggttgaaggtgatccaaaccct 174
                |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 41689746 agaaatgtggcctaaggaagctgatatatctggttgaaggtgatccaaaccct 41689798



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                            
Query: 433      atgcaggtaccacaggtgacagaagaaactgcaattgcagttatagagctctacccgaca 492
                |||||||| ||||| |||||||||||| ||||| |||| || |||| |||||| || || 
Sbjct: 41690311 atgcaggtgccacaagtgacagaagaagctgcacttgctgtgatagggctctatccaact 41690370

                                                  
Query: 493      cttgtctcacttgctcgggcatactccatgcttg 526
                ||| |||||||||||  ||| ||||| |||||||
Sbjct: 41690371 cttttctcacttgctaaggcgtactctatgcttg 41690404



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 77/92 (83%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                            
Query: 526      gatggcgatagccctgcccaagagaagatgctgaacatgaagagcaaggatggtgaacgc 585
                ||||| |||| || |||||||||||||||| |||| |  ||||||| |  || | || ||
Sbjct: 41690607 gatggtgatacccatgcccaagagaagatgttgaagaacaagagcacgc-tgataaatgc 41690665

                                                
Query: 586      aggggctagcagaaatatcttcaagcttgtct 617
                ||||||||||||||| || |||||||||||||
Sbjct: 41690666 aggggctagcagaaacatattcaagcttgtct 41690697



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                            
Query: 26       gagtatgttcttgacttc-ttgttgaaaggaaaagtgtcacagatttagttagctcaatt 84
                |||||||||||||| ||| ||||||||||||| | |||  |||||||   ||| ||||| 
Sbjct: 41689115 gagtatgttcttgatttcattgttgaaaggaagaatgttgcagatttgtgtagttcaatc 41689174

                                                   
Query: 85       agagacagcaggtacaaagatcagaaattaaggct 119
                | ||||| | | |||||||||||||| ||||||||
Sbjct: 41689175 acagacaaccgatacaaagatcagaagttaaggct 41689209
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>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0466H10
          Length = 176530

 Score =  123 bits (62), Expect = 8e-25
 Identities = 194/238 (81%)
 Strand = Plus / Plus

                                                                          
Query: 204    ctgcttcacaagtgagattcttgaaggatttgatgttcaaagaaccaccgggtattctga 263
              ||||||||| | ||| |||||||||||||||||||| || |||||| | |||||| ||||
Sbjct: 105580 ctgcttcaccactgaaattcttgaaggatttgatgtccagagaacccctgggtatgctga 105639

                                                                          
Query: 264    tactgaaaggacatatggccacctgacactttcgataattgattactacagcatgaaatt 323
               |||| ||||||||||||| |||| || | ||| ||||  || ||||||||||   | ||
Sbjct: 105640 gactgtaaggacatatggcaaccttactcattcaataaccgaatactacagcacacactt 105699

                                                                          
Query: 324    ctcaatcggtgctaacactagtcgagtttgcttaacttatgacgagtttgtgaagaagtg 383
               || |  |||||||| |||  || ||||||| | || ||||| ||||||  |||||||||
Sbjct: 105700 ttctactggtgctaatacttctcaagtttgcctgacctatgatgagtttacgaagaagtg 105759

                                                                        
Query: 384    ttgtgaccccaagaagttaactgtgagcgacatattcgcccttcaacttatgcaggta 441
              |  |||||  |||||| |||||||||| ||  ||||||||||||||||||||||||||
Sbjct: 105760 tgatgaccttaagaagataactgtgagtgatgtattcgcccttcaacttatgcaggta 105817



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Plus

                                                                   
Query: 122    agaaatgtggactaagaaagctgatatatctggttgaaggtgatccaaaccct 174
              |||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 105348 agaaatgtggcctaaggaagctgatatatctggttgaaggtgatccaaaccct 105400



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 79/94 (84%)
 Strand = Plus / Plus

                                                                          
Query: 433    atgcaggtaccacaggtgacagaagaaactgcaattgcagttatagagctctacccgaca 492
              |||||||| ||||| |||||||||||| ||||| |||| || |||| |||||| || || 
Sbjct: 105913 atgcaggtgccacaagtgacagaagaagctgcacttgctgtgatagggctctatccaact 105972

                                                
Query: 493    cttgtctcacttgctcgggcatactccatgcttg 526
              ||| |||||||||||  ||| ||||| |||||||
Sbjct: 105973 cttttctcacttgctaaggcgtactctatgcttg 106006



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 77/92 (83%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                          
Query: 526    gatggcgatagccctgcccaagagaagatgctgaacatgaagagcaaggatggtgaacgc 585
              ||||| |||| || |||||||||||||||| |||| |  ||||||| |  || | || ||
Sbjct: 106209 gatggtgatacccatgcccaagagaagatgttgaagaacaagagcacgc-tgataaatgc 106267

                                              
Query: 586    aggggctagcagaaatatcttcaagcttgtct 617
              ||||||||||||||| || |||||||||||||
Sbjct: 106268 aggggctagcagaaacatattcaagcttgtct 106299



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 79/95 (83%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                          
Query: 26     gagtatgttcttgacttc-ttgttgaaaggaaaagtgtcacagatttagttagctcaatt 84
              |||||||||||||| ||| ||||||||||||| | |||  |||||||   ||| ||||| 
Sbjct: 104717 gagtatgttcttgatttcattgttgaaaggaagaatgttgcagatttgtgtagttcaatc 104776

                                                 
Query: 85     agagacagcaggtacaaagatcagaaattaaggct 119
              | ||||| | | |||||||||||||| ||||||||
Sbjct: 104777 acagacaaccgatacaaagatcagaagttaaggct 104811
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>gb|AF003692.1|AF003692 Plexaura homomalla 8R-lipoxygenase-allene oxide synthase fusion
            protein mRNA, complete cds
          Length = 3358

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 597  gaaatatcttcaagcttgtcttgg 620
            ||||||||||||||||||||||||
Sbjct: 3209 gaaatatcttcaagcttgtcttgg 3186
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>gb|AC087256.9| Homo sapiens 12q BAC RP11-443N24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 149546

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 212   caagtgagattcttgaaggatt 233
             ||||||||||||||||||||||
Sbjct: 35953 caagtgagattcttgaaggatt 35932
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>gb|AC021868.17|AC021868 Homo sapiens 12 BAC RP11-679N16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 168227

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 212   caagtgagattcttgaaggatt 233
             ||||||||||||||||||||||
Sbjct: 99086 caagtgagattcttgaaggatt 99107
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>gb|AC019209.3|AC019209 Homo sapiens BAC clone RP11-443N24 from Sequence-12, complete sequence
          Length = 196817

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 212   caagtgagattcttgaaggatt 233
             ||||||||||||||||||||||
Sbjct: 83224 caagtgagattcttgaaggatt 83203
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>ref|NM_119234.2| Arabidopsis thaliana endonuclease/ nuclease/ nucleic acid binding
            AT4G30870 mRNA, complete cds
          Length = 1980

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                        
Query: 155  ttgaaggtgatccaaaccctttaggcgcatcagagagcatcaaaacagcctgcttcacaa 214
            ||||||| |||||||||| ||  |  ||| |||| ||||| |||||||| || ||||| |
Sbjct: 1499 ttgaaggggatccaaaccattctgatgcagcagaaagcattaaaacagcttgtttcacga 1558

                                     
Query: 215  gtgagattcttgaaggatttgatgt 239
              |||||||| || |||||||||||
Sbjct: 1559 cagagattctggagggatttgatgt 1583
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>ref|NM_129027.2| Arabidopsis thaliana unknown protein AT2G34730 mRNA, complete cds
          Length = 2656

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 375  gaagaagtgttgtgaccccaagaag 399
            ||||||||||||||||| |||||||
Sbjct: 2274 gaagaagtgttgtgacctcaagaag 2298
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>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence
          Length = 188677

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 226    gaaggatttgatgttcaaagaacca 250
              ||||||||||||||| |||||||||
Sbjct: 169455 gaaggatttgatgtttaaagaacca 169479
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>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence
          Length = 191733

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     gagatctcatactgagtatgt 33
              |||||||||||||||||||||
Sbjct: 126310 gagatctcatactgagtatgt 126290
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>gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, complete sequence
          Length = 237801

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    tgaaaggaaaagtgtcacaga 68
             |||||||||||||||||||||
Sbjct: 15465 tgaaaggaaaagtgtcacaga 15445
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>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete
             sequence
          Length = 69817

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 375   gaagaagtgttgtgaccccaagaag 399
             ||||||||||||||||| |||||||
Sbjct: 15539 gaagaagtgttgtgacctcaagaag 15515
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>dbj|AB177892.1| Arabidopsis thaliana AtMus81 mRNA for endonuclease, complete cds
          Length = 1980

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                        
Query: 155  ttgaaggtgatccaaaccctttaggcgcatcagagagcatcaaaacagcctgcttcacaa 214
            ||||||| |||||||||| ||  |  ||| |||| ||||| |||||||| || ||||| |
Sbjct: 1499 ttgaaggggatccaaaccattctgatgcagcagaaagcattaaaacagcttgtttcacga 1558

                                     
Query: 215  gtgagattcttgaaggatttgatgt 239
              |||||||| || |||||||||||
Sbjct: 1559 cagagattctggagggatttgatgt 1583
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>gb|AC153933.3| Mus musculus 10 BAC RP24-282I24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179847

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     tgaaaggaaaagtgtcacaga 68
              |||||||||||||||||||||
Sbjct: 117713 tgaaaggaaaagtgtcacaga 117693
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>gb|AC149868.2| Mus musculus BAC clone RP23-226I6 from 7, complete sequence
          Length = 190971

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 226    gaaggatttgatgttcaaagaacca 250
              ||||||||||||||| |||||||||
Sbjct: 110869 gaaggatttgatgtttaaagaacca 110893
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>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence
          Length = 227073

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 226    gaaggatttgatgttcaaagaacca 250
              ||||||||||||||| |||||||||
Sbjct: 221168 gaaggatttgatgtttaaagaacca 221144
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>dbj|AB028894.1| Mus musculus Rps11, U35 genes for ribosomal protein S11 and U35
           snoRNA, complete cds and sequence
          Length = 3682

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 226 gaaggatttgatgttcaaagaacca 250
           ||||||||||||||| |||||||||
Sbjct: 783 gaaggatttgatgtttaaagaacca 759
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>gb|AC008221.5| Drosophila melanogaster clone BACR30B13, complete sequence
          Length = 184278

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    gaaactgcaattgcagttat 476
              ||||||||||||||||||||
Sbjct: 166702 gaaactgcaattgcagttat 166683
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>ref|XM_424927.1| PREDICTED: Gallus gallus doublesex and mab-3 related transcription
            factor 1 (DMRT1), mRNA
          Length = 6909

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   ttcttgttgaaaggaaaagt 60
            ||||||||||||||||||||
Sbjct: 3683 ttcttgttgaaaggaaaagt 3702
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>gb|AC113540.12| Mus musculus chromosome 17, clone RP23-158F13, complete sequence
          Length = 219781

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     gagtatgttcttgacttctt 45
              ||||||||||||||||||||
Sbjct: 135709 gagtatgttcttgacttctt 135728
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>gb|AC131920.7| Mus musculus chromosome 14, clone RP23-450N9, complete sequence
          Length = 201436

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 210   cacaagtgagattcttgaaggatt 233
             ||||| ||||||||||||||||||
Sbjct: 71895 cacaaatgagattcttgaaggatt 71872
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>emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 in linkage group 17,
             complete sequence
          Length = 91210

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 40    cttcttgttgaaaggaaaagtgtcacag 67
             ||||||| ||||| ||||||||||||||
Sbjct: 20711 cttcttggtgaaatgaaaagtgtcacag 20738
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>gb|AC133182.3| Mus musculus BAC clone RP24-181H19 from chromosome 18, complete
             sequence
          Length = 163378

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   attgattactacagcatgaa 320
             ||||||||||||||||||||
Sbjct: 73337 attgattactacagcatgaa 73356
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>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence
          Length = 178858

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 606    tcaagcttgtcttggggtga 625
              ||||||||||||||||||||
Sbjct: 105740 tcaagcttgtcttggggtga 105721
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>ref|XM_735722.1| Plasmodium chabaudi chabaudi Pc-fam-4 protein (PC105030.00.0)
           partial mRNA
          Length = 505

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 gaaactgcaattgcagttat 476
           ||||||||||||||||||||
Sbjct: 317 gaaactgcaattgcagttat 336
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>emb|AL606504.14| Human DNA sequence from clone RP11-358K2 on chromosome 10, complete
             sequence
          Length = 81147

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 613   tgtcttggggtgaagggtga 632
             ||||||||||||||||||||
Sbjct: 51929 tgtcttggggtgaagggtga 51948
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>gb|AC101711.7| Mus musculus, clone RP23-279K17, complete sequence
          Length = 174802

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 210  cacaagtgagattcttgaaggatt 233
            ||||| ||||||||||||||||||
Sbjct: 4643 cacaaatgagattcttgaaggatt 4620
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>gb|AY149028.1| Plasmodium chabaudi chabaudi strain AS clone YAC101, complete sequence
          Length = 80019

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   gaaactgcaattgcagttat 476
             ||||||||||||||||||||
Sbjct: 37616 gaaactgcaattgcagttat 37597
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>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete
             sequence
          Length = 215657

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    gacagcaggtacaaagatcagaaa 111
             |||||||||||||||| |||||||
Sbjct: 21642 gacagcaggtacaaaggtcagaaa 21665
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>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
              complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gttcttgacttcttgttgaa 51
              ||||||||||||||||||||
Sbjct: 157104 gttcttgacttcttgttgaa 157123
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>tpg|BK002932.1| TPA: TPA_inf: Drosophila melanogaster HDC16559 (HDC16559) gene,
           complete cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 457 gaaactgcaattgcagttat 476
           ||||||||||||||||||||
Sbjct: 210 gaaactgcaattgcagttat 191
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>dbj|AB188528.1| Clavularia viridis mRNA for putative 8-lipoxygenase-allene oxide
            synthase fusion protein, complete cds
          Length = 3585

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 597  gaaatatcttcaagcttgtcttgg 620
            ||||||||||||||| ||||||||
Sbjct: 3274 gaaatatcttcaagcctgtcttgg 3251
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>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
             sequence
          Length = 117157

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gttcttgacttcttgttgaa 51
             ||||||||||||||||||||
Sbjct: 79868 gttcttgacttcttgttgaa 79849
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>gb|AC087638.7| Homo sapiens chromosome 15, clone RP11-655F8, complete sequence
          Length = 173062

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 24     ctgagtatgttcttgacttcttgttgaa 51
              ||||||||| |||||| |||||||||||
Sbjct: 159229 ctgagtatggtcttgatttcttgttgaa 159256
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>gb|AC010809.10| Homo sapiens, clone RP11-3D4, complete sequence
          Length = 173087

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 24     ctgagtatgttcttgacttcttgttgaa 51
              ||||||||| |||||| |||||||||||
Sbjct: 163107 ctgagtatggtcttgatttcttgttgaa 163080
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 588     gggctagcagaaatatcttcaagc 611
               |||| |||||||||||||||||||
Sbjct: 2304803 gggcaagcagaaatatcttcaagc 2304826
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       gttcttgacttcttgttgaa 51
                ||||||||||||||||||||
Sbjct: 16278215 gttcttgacttcttgttgaa 16278234
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>gb|AC108202.3| Homo sapiens BAC clone RP11-20M7 from 4, complete sequence
          Length = 154274

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 225   tgaaggatttgatgttcaaa 244
             ||||||||||||||||||||
Sbjct: 76780 tgaaggatttgatgttcaaa 76799
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>ref|XM_318459.2| Anopheles gambiae str. PEST ENSANGP00000002816 (ENSANGG00000002329),
            partial mRNA
          Length = 4803

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 548  agaagatgctgaacatgaagagca 571
            |||||||||||||| |||||||||
Sbjct: 4724 agaagatgctgaacgtgaagagca 4747
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>gb|AE003777.3| Drosophila melanogaster chromosome 3R, section 115 of 118 of the complete
              sequence
          Length = 232290

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    gaaactgcaattgcagttat 476
              ||||||||||||||||||||
Sbjct: 196927 gaaactgcaattgcagttat 196908
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>gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, complete sequence
          Length = 177570

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   attgattactacagcatgaa 320
             ||||||||||||||||||||
Sbjct: 30191 attgattactacagcatgaa 30172
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>emb|AL732601.16| Mouse DNA sequence from clone RP23-154J12 on chromosome 2, complete
             sequence
          Length = 192345

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   cagcctgcttcacaagtgag 219
             ||||||||||||||||||||
Sbjct: 27179 cagcctgcttcacaagtgag 27198
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 32       gttcttgacttcttgttgaa 51
                ||||||||||||||||||||
Sbjct: 16286456 gttcttgacttcttgttgaa 16286475
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     aaattctcaatcggtgctaa 338
               ||||||||||||||||||||
Sbjct: 2002250 aaattctcaatcggtgctaa 2002231
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>gb|AC132082.3| Mus musculus BAC clone RP24-511K23 from 1, complete sequence
          Length = 165033

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 605   ttcaagcttgtcttggggtgaagg 628
             ||||||||||||||||||| ||||
Sbjct: 14593 ttcaagcttgtcttggggttaagg 14570
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>gb|AC124553.4| Mus musculus BAC clone RP23-223I5 from 1, complete sequence
          Length = 179316

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 605   ttcaagcttgtcttggggtgaagg 628
             ||||||||||||||||||| ||||
Sbjct: 11454 ttcaagcttgtcttggggttaagg 11477
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>emb|CR626962.9| Zebrafish DNA sequence from clone CH211-15D5 in linkage group 17,
             complete sequence
          Length = 117015

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 40    cttcttgttgaaaggaaaagtgtcacag 67
             ||||||| ||||| ||||||||||||||
Sbjct: 92487 cttcttggtgaaatgaaaagtgtcacag 92460
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     atctggttgaaggtgatcca 168
               ||||||||||||||||||||
Sbjct: 1070488 atctggttgaaggtgatcca 1070469
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>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete
              sequence
          Length = 228428

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    agcctgcttcacaagtgaga 220
              ||||||||||||||||||||
Sbjct: 206091 agcctgcttcacaagtgaga 206072
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>gb|U20611.1|MMU20611 Mus musculus thioredoxin-dependent peroxide reductase (tpx) mRNA,
          complete cds
          Length = 907

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  attcggcacgaggagatctc 20
          ||||||||||||||||||||
Sbjct: 3  attcggcacgaggagatctc 22
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>dbj|AB001823.1| Dendrolimus spectabilis Fib-P25 mRNA for fibroin P25, complete cds
          Length = 4335

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  ttcttgacttcttgttgaaa 52
           ||||||||||||||||||||
Sbjct: 321 ttcttgacttcttgttgaaa 302


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,717,232
Number of Sequences: 3902068
Number of extensions: 5717232
Number of successful extensions: 108219
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 108025
Number of HSP's gapped (non-prelim): 190
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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