ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62p18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192597.1| Oryza sativa (japonica cultivar-group), predic... 392 e-106
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
3dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
4dbj|AB252069.1| Oryza sativa (indica cultivar-group) DNA, SCAR m... 109 1e-20
5gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete s... 48 0.036
6gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, comp... 44 0.56
7ref|XM_380231.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 44 0.56
8ref|NM_128132.1| Arabidopsis thaliana unknown protein AT2G25730 ... 40 8.7
9ref|XM_473001.1| Oryza sativa (japonica cultivar-group), predic... 40 8.7
10ref|XM_472287.1| Oryza sativa (japonica cultivar-group), predic... 40 8.7
11gb|AC123744.8| Mus musculus chromosome 7, clone RP24-120F8, comp... 40 8.7
12gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 8.7
13gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, comp... 40 8.7
14gb|AC158349.5| Mus musculus chromosome 8, clone RP24-229D22, com... 40 8.7
15gb|AY427752.1| Plasmodium yoelii S4 (S4) gene, complete cds 40 8.7
16emb|Z74029.1|CEC45B11 Caenorhabditis elegans Cosmid C45B11, comp... 40 8.7
17gb|AC134452.4| Mus musculus BAC clone RP24-252M6 from chromosome... 40 8.7
18emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete ch... 40 8.7
19gb|BT001077.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, com... 40 8.7
20gb|AC131710.3| Mus musculus BAC clone RP23-187M22 from 15, compl... 40 8.7
21gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, compl... 40 8.7
22gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence 40 8.7
23emb|CR391912.8| Zebrafish DNA sequence from clone CH211-254P10 i... 40 8.7
24emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4,... 40 8.7
25gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map... 40 8.7
26gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosom... 40 8.7
27gb|AY048285.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, com... 40 8.7
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
29emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in ... 40 8.7
30gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, comple... 40 8.7
31dbj|AK122001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.7
32emb|AJ234840.1|HVU234840 Hordeum vulgare genomic DNA fragment; c... 40 8.7
33emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.7
34emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 40 8.7 
>ref|NM_192597.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 7305

 Score =  392 bits (198), Expect = e-106
 Identities = 348/398 (87%)
 Strand = Plus / Plus

                                                                        
Query: 234  caagctcttcaacagttcaaaggtgatgcacctcctgttgtccttgatatcattaacaca 293
            |||||||||||||| | |||||| |||||| ||| | |||||||||| ||||| |  |||
Sbjct: 5809 caagctcttcaacaatacaaaggggatgcaactcattttgtccttgaaatcatcagtaca 5868

                                                                        
Query: 294  attgaaggaggtcctcctgttgatgtttcttctgtccgctctatgtatgaacatgtagca 353
            ||||||||||| ||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 5869 attgaaggagggcctcctgttgacgtttcttctgtccgttctatgtacgaacatttagca 5928

                                                                        
Query: 354  aaaagtgcagcaaccatcttcgatgattccctttctgctgattcttatcttaatgttcta 413
            ||||||||||| ||||| || |||||||| |||||||||||| |||| || |||||||| 
Sbjct: 5929 aaaagtgcagctaccatttttgatgattcactttctgctgatgcttacctcaatgttctc 5988

                                                                        
Query: 414  tatatgccatccacattcccacgatctgagaggtccaggcaatccagagattctctagat 473
            || ||||||||||||||||||||||||||||||||||||||||| | || | || | || 
Sbjct: 5989 tacatgccatccacattcccacgatctgagaggtccaggcaatcgaaaggtcctatggac 6048

                                                                        
Query: 474  agccaattttcgtctgctagctcataccttgaagatggtcctcgcagcaatcttgatagc 533
            ||||| |||   |||| | | |||||||| |||||||||||||||||||| |||||| | 
Sbjct: 6049 agccagtttgaatctgttggttcatacctagaagatggtcctcgcagcaaccttgatgga 6108

                                                                        
Query: 534  gtccgatatgcagagtgtattcattacttacaggaatatgctcgcccacaaatgcttgct 593
             |||||||||| ||||||||||||||||| || ||||||||||| ||| |||||||||||
Sbjct: 6109 atccgatatgccgagtgtattcattacttgcaagaatatgctcgaccagaaatgcttgct 6168

                                                  
Query: 594  ttcatgttcaggcatggccattatgcagaagcatgctc 631
            ||||||||||||||||| |||||||||||||| |||||
Sbjct: 6169 ttcatgttcaggcatggtcattatgcagaagcgtgctc 6206



 Score =  180 bits (91), Expect = 4e-42
 Identities = 166/191 (86%)
 Strand = Plus / Plus

                                                                        
Query: 36   attattgcatcacttgatgatattgctggcaaagagtcttcaactagtctacgtgacagg 95
            |||||||| ||||| |||||  ||||||  ||||| |||||||||| ||| |||||||| 
Sbjct: 5593 attattgcctcactagatgactttgctgataaagaatcttcaactaatctgcgtgacaga 5652

                                                                        
Query: 96   ctggtcagtgatgagcgatacagcatggctgtatatacttctaagaagtgcaagattgat 155
             ||||||| ||||| || || || |||||||||||||||| ||| || ||||||||||| 
Sbjct: 5653 ttggtcagcgatgaacggtatagtatggctgtatatacttgtaaaaaatgcaagattgac 5712

                                                                        
Query: 156  gcttttccagtgtgggttgcatggggccatgctctagttcgaatggaacactacgctcaa 215
            || |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 5713 gcctttccagtttgggttgcatggggccatgctctagttcgaatggaacattactctcaa 5772

                       
Query: 216  gcccgtgtgaa 226
            || ||||||||
Sbjct: 5773 gcacgtgtgaa 5783
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  200 bits (101), Expect = 4e-48
 Identities = 191/221 (86%)
 Strand = Plus / Plus

                                                                            
Query: 342      gaacatgtagcaaaaagtgcagcaaccatcttcgatgattccctttctgctgattcttat 401
                |||||| |||||||||||||||| ||||| || |||||||| |||||||||||| |||| 
Sbjct: 23202935 gaacatttagcaaaaagtgcagctaccatttttgatgattcactttctgctgatgcttac 23202994

                                                                            
Query: 402      cttaatgttctatatatgccatccacattcccacgatctgagaggtccaggcaatccaga 461
                || |||||||| || ||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 23202995 ctcaatgttctctacatgccatccacattcccacgatctgagaggtccaggcaatcgaaa 23203054

                                                                            
Query: 462      gattctctagatagccaattttcgtctgctagctcataccttgaagatggtcctcgcagc 521
                | | || | || ||||| |||   |||| | | |||||||| ||||||||||||||||||
Sbjct: 23203055 ggtcctatggacagccagtttgaatctgttggttcatacctagaagatggtcctcgcagc 23203114

                                                         
Query: 522      aatcttgatagcgtccgatatgcagagtgtattcattactt 562
                || |||||| |  |||||||||| |||||||||||||||||
Sbjct: 23203115 aaccttgatggaatccgatatgccgagtgtattcattactt 23203155



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                            
Query: 234      caagctcttcaacagttcaaaggtgatgcacctcctgttgtccttgatatcattaacaca 293
                |||||||||||||| | |||||| |||||| ||| | |||||||||| ||||| |  |||
Sbjct: 23202478 caagctcttcaacaatacaaaggggatgcaactcattttgtccttgaaatcatcagtaca 23202537

                                                               
Query: 294      attgaaggaggtcctcctgttgatgtttcttctgtccgctctatgta 340
                ||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 23202538 attgaaggagggcctcctgttgacgtttcttctgtccgttctatgta 23202584



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                            
Query: 148      agattgatgcttttccagtgtgggttgcatggggccatgctctagttcgaatggaacact 207
                ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 23201814 agattgacgcctttccagtttgggttgcatggggccatgctctagttcgaatggaacatt 23201873

                                   
Query: 208      acgctcaagcccgtgtgaa 226
                || ||||||| ||||||||
Sbjct: 23201874 actctcaagcacgtgtgaa 23201892



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                            
Query: 570      tatgctcgcccacaaatgcttgctttcatgttcaggcatggccattatgcagaagcatgc 629
                |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 23203913 tatgctcgaccagaaatgcttgctttcatgttcaggcatggtcattatgcagaagcgtgc 23203972

                  
Query: 630      tc 631
                ||
Sbjct: 23203973 tc 23203974



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                            
Query: 36       attattgcatcacttgatgatattgctggcaaagagtcttcaactagtctacgtgacagg 95
                |||||||| ||||| |||||  ||||||  ||||| |||||||||| ||| |||||||| 
Sbjct: 23201616 attattgcctcactagatgactttgctgataaagaatcttcaactaatctgcgtgacaga 23201675

                                                                      
Query: 96       ctggtcagtgatgagcgatacagcatggctgtatatacttctaagaagtgcaag 149
                 ||||||| ||||| || || || |||||||||||||||| ||| || ||||||
Sbjct: 23201676 ttggtcagcgatgaacggtatagtatggctgtatatacttgtaaaaaatgcaag 23201729
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>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710A02
          Length = 157201

 Score =  200 bits (101), Expect = 4e-48
 Identities = 191/221 (86%)
 Strand = Plus / Plus

                                                                          
Query: 342    gaacatgtagcaaaaagtgcagcaaccatcttcgatgattccctttctgctgattcttat 401
              |||||| |||||||||||||||| ||||| || |||||||| |||||||||||| |||| 
Sbjct: 135094 gaacatttagcaaaaagtgcagctaccatttttgatgattcactttctgctgatgcttac 135153

                                                                          
Query: 402    cttaatgttctatatatgccatccacattcccacgatctgagaggtccaggcaatccaga 461
              || |||||||| || ||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 135154 ctcaatgttctctacatgccatccacattcccacgatctgagaggtccaggcaatcgaaa 135213

                                                                          
Query: 462    gattctctagatagccaattttcgtctgctagctcataccttgaagatggtcctcgcagc 521
              | | || | || ||||| |||   |||| | | |||||||| ||||||||||||||||||
Sbjct: 135214 ggtcctatggacagccagtttgaatctgttggttcatacctagaagatggtcctcgcagc 135273

                                                       
Query: 522    aatcttgatagcgtccgatatgcagagtgtattcattactt 562
              || |||||| |  |||||||||| |||||||||||||||||
Sbjct: 135274 aaccttgatggaatccgatatgccgagtgtattcattactt 135314



 Score =  109 bits (55), Expect = 1e-20
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                          
Query: 234    caagctcttcaacagttcaaaggtgatgcacctcctgttgtccttgatatcattaacaca 293
              |||||||||||||| | |||||| |||||| ||| | |||||||||| ||||| |  |||
Sbjct: 134637 caagctcttcaacaatacaaaggggatgcaactcattttgtccttgaaatcatcagtaca 134696

                                                             
Query: 294    attgaaggaggtcctcctgttgatgtttcttctgtccgctctatgta 340
              ||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 134697 attgaaggagggcctcctgttgacgtttcttctgtccgttctatgta 134743



 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                          
Query: 148    agattgatgcttttccagtgtgggttgcatggggccatgctctagttcgaatggaacact 207
              ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 133973 agattgacgcctttccagtttgggttgcatggggccatgctctagttcgaatggaacatt 134032

                                 
Query: 208    acgctcaagcccgtgtgaa 226
              || ||||||| ||||||||
Sbjct: 134033 actctcaagcacgtgtgaa 134051



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                          
Query: 570    tatgctcgcccacaaatgcttgctttcatgttcaggcatggccattatgcagaagcatgc 629
              |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 136072 tatgctcgaccagaaatgcttgctttcatgttcaggcatggtcattatgcagaagcgtgc 136131

                
Query: 630    tc 631
              ||
Sbjct: 136132 tc 136133



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                          
Query: 36     attattgcatcacttgatgatattgctggcaaagagtcttcaactagtctacgtgacagg 95
              |||||||| ||||| |||||  ||||||  ||||| |||||||||| ||| |||||||| 
Sbjct: 133775 attattgcctcactagatgactttgctgataaagaatcttcaactaatctgcgtgacaga 133834

                                                                    
Query: 96     ctggtcagtgatgagcgatacagcatggctgtatatacttctaagaagtgcaag 149
               ||||||| ||||| || || || |||||||||||||||| ||| || ||||||
Sbjct: 133835 ttggtcagcgatgaacggtatagtatggctgtatatacttgtaaaaaatgcaag 133888
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>dbj|AB252069.1| Oryza sativa (indica cultivar-group) DNA, SCAR marker SCAR2106 in
           chromosome 1
          Length = 926

 Score =  109 bits (55), Expect = 1e-20
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 148 agattgatgcttttccagtgtgggttgcatggggccatgctctagttcgaatggaacact 207
           ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 317 agattgacgcctttccagtttgggttgcatggggccatgctctagttcgaatggaacatt 376

                              
Query: 208 acgctcaagcccgtgtgaa 226
           || ||||||| ||||||||
Sbjct: 377 actctcaagcacgtgtgaa 395



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 95/114 (83%)
 Strand = Plus / Plus

                                                                       
Query: 36  attattgcatcacttgatgatattgctggcaaagagtcttcaactagtctacgtgacagg 95
           |||||||| ||||| |||||  ||||||  ||||| |||||||||| ||| |||||||| 
Sbjct: 119 attattgcctcactagatgactttgctgataaagaatcttcaactaatctgcgtgacaga 178

                                                                 
Query: 96  ctggtcagtgatgagcgatacagcatggctgtatatacttctaagaagtgcaag 149
            ||||||| ||||| || || || |||||||||||||||| ||| || ||||||
Sbjct: 179 ttggtcagcgatgaacggtatagtatggctgtatatacttgtaaaaaatgcaag 232
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>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence
          Length = 133305

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 375   gatgattccctttctgctgattcttatcttaa 406
             |||||||| |||||||||||||| ||||||||
Sbjct: 63449 gatgattctctttctgctgattcatatcttaa 63480
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>gb|AC102229.7| Mus musculus chromosome 15, clone RP24-70F9, complete sequence
          Length = 202156

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 539    atatgcagagtgtattcattac 560
              ||||||||||||||||||||||
Sbjct: 183643 atatgcagagtgtattcattac 183622
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>ref|XM_380231.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00055.1)
            partial mRNA
          Length = 8865

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 267  cctgttgtccttgatatcatta 288
            ||||||||||||||||||||||
Sbjct: 2280 cctgttgtccttgatatcatta 2301
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>ref|NM_128132.1| Arabidopsis thaliana unknown protein AT2G25730 mRNA, complete cds
          Length = 7844

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 405  aatgttctatatatgccatccacattcccacgatctgagaggtc 448
            ||||||||  ||||||||||||| ||||| || || ||||||||
Sbjct: 6049 aatgttctgcatatgccatccactttccctcgttcagagaggtc 6092
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>ref|XM_473001.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3747

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   gatgatattgctggcaaaga 70
            ||||||||||||||||||||
Sbjct: 1127 gatgatattgctggcaaaga 1108
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>ref|XM_472287.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2859

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 350  agcaaaaagtgcagcaaccatctt 373
            ||||| ||||||||||||||||||
Sbjct: 1956 agcaagaagtgcagcaaccatctt 1933
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>gb|AC123744.8| Mus musculus chromosome 7, clone RP24-120F8, complete sequence
          Length = 160977

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   cctgttgatgtttcttctgt 328
             ||||||||||||||||||||
Sbjct: 41778 cctgttgatgtttcttctgt 41797
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 294     attgaaggaggtcctcctgttgatgttt 321
               |||||||||||  |||||||||||||||
Sbjct: 3231776 attgaaggaggagctcctgttgatgttt 3231749



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 294     attgaaggaggtcctcctgttgatgttt 321
               |||||||||||  |||||||||||||||
Sbjct: 1919116 attgaaggaggagctcctgttgatgttt 1919089
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>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence
          Length = 165714

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 540   tatgcagagtgtattcatta 559
             ||||||||||||||||||||
Sbjct: 34146 tatgcagagtgtattcatta 34165
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>gb|AC158349.5| Mus musculus chromosome 8, clone RP24-229D22, complete sequence
          Length = 163656

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 540    tatgcagagtgtattcatta 559
              ||||||||||||||||||||
Sbjct: 105313 tatgcagagtgtattcatta 105332
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>gb|AY427752.1| Plasmodium yoelii S4 (S4) gene, complete cds
          Length = 558

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  tgcatcacttgatgatattg 60
           ||||||||||||||||||||
Sbjct: 174 tgcatcacttgatgatattg 193
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>emb|Z74029.1|CEC45B11 Caenorhabditis elegans Cosmid C45B11, complete sequence
          Length = 15489

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 498  taccttgaagatggtcctcg 517
            ||||||||||||||||||||
Sbjct: 2325 taccttgaagatggtcctcg 2344
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>gb|AC134452.4| Mus musculus BAC clone RP24-252M6 from chromosome 16, complete sequence
          Length = 149607

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    gctgtatatacttctaagaa 142
              ||||||||||||||||||||
Sbjct: 147443 gctgtatatacttctaagaa 147424
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>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12
          Length = 323450

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     cttgatgatattgctggcaa 67
              ||||||||||||||||||||
Sbjct: 277261 cttgatgatattgctggcaa 277280
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>gb|BT001077.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, complete cds
          Length = 1599

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 405 aatgttctatatatgccatccacattcccacgatctgagaggtc 448
           ||||||||  ||||||||||||| ||||| || || ||||||||
Sbjct: 286 aatgttctgcatatgccatccactttccctcgttcagagaggtc 329
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>gb|AC131710.3| Mus musculus BAC clone RP23-187M22 from 15, complete sequence
          Length = 224591

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 604   ggcatggccattatgcagaa 623
             ||||||||||||||||||||
Sbjct: 88977 ggcatggccattatgcagaa 88996
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>gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, complete sequence
          Length = 167576

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   gctgtatatacttctaagaa 142
             ||||||||||||||||||||
Sbjct: 74044 gctgtatatacttctaagaa 74063
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>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence
          Length = 213888

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    tgaagatggtcctcgcagca 522
              ||||||||||||||||||||
Sbjct: 193348 tgaagatggtcctcgcagca 193329
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>emb|CR391912.8| Zebrafish DNA sequence from clone CH211-254P10 in linkage group 16,
             complete sequence
          Length = 151269

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   tctgctgattcttatcttaa 406
             ||||||||||||||||||||
Sbjct: 94691 tctgctgattcttatcttaa 94710
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>emb|AL662938.3|OSJN00138 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ990528_30,
             complete sequence
          Length = 88547

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    gatgatattgctggcaaaga 70
             ||||||||||||||||||||
Sbjct: 50642 gatgatattgctggcaaaga 50623
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>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete
             sequence
          Length = 100745

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                         
Query: 405   aatgttctatatatgccatccacattcccacgatctgagaggtc 448
             ||||||||  ||||||||||||| ||||| || || ||||||||
Sbjct: 77455 aatgttctgcatatgccatccactttccctcgttcagagaggtc 77412
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>gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosome 16, complete
             sequence
          Length = 157491

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   gctgtatatacttctaagaa 142
             ||||||||||||||||||||
Sbjct: 69361 gctgtatatacttctaagaa 69342
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>gb|AY048285.1| Arabidopsis thaliana At2g25730/F3N11.18 mRNA, complete cds
          Length = 2193

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 405 aatgttctatatatgccatccacattcccacgatctgagaggtc 448
           ||||||||  ||||||||||||| ||||| || || ||||||||
Sbjct: 498 aatgttctgcatatgccatccactttccctcgttcagagaggtc 541
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       gatgatattgctggcaaaga 70
                ||||||||||||||||||||
Sbjct: 24595497 gatgatattgctggcaaaga 24595478



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 350      agcaaaaagtgcagcaaccatctt 373
                ||||| ||||||||||||||||||
Sbjct: 19122588 agcaagaagtgcagcaaccatctt 19122565
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>emb|BX005336.10| Zebrafish DNA sequence from clone DKEY-85K7 in linkage group 7,
           complete sequence
          Length = 233826

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 tatcattaacacaattgaag 300
           ||||||||||||||||||||
Sbjct: 936 tatcattaacacaattgaag 955
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>gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, complete sequence
          Length = 169408

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 128   atatacttctaagaagtgcaagat 151
             ||||||| ||||||||||||||||
Sbjct: 24617 atatactactaagaagtgcaagat 24640
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>dbj|AK122001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110J06, full
            insert sequence
          Length = 3630

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 350  agcaaaaagtgcagcaaccatctt 373
            ||||| ||||||||||||||||||
Sbjct: 2414 agcaagaagtgcagcaaccatctt 2391
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>emb|AJ234840.1|HVU234840 Hordeum vulgare genomic DNA fragment; clone MWG2214
          Length = 445

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 350 agcaaaaagtgcagcaaccatctt 373
           ||||| ||||||||||||||||||
Sbjct: 264 agcaagaagtgcagcaaccatctt 241
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>emb|AL512542.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0522A01, complete
            sequence
          Length = 97077

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   gatgatattgctggcaaaga 70
            ||||||||||||||||||||
Sbjct: 1281 gatgatattgctggcaaaga 1262
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 350   agcaaaaagtgcagcaaccatctt 373
             ||||| ||||||||||||||||||
Sbjct: 56109 agcaagaagtgcagcaaccatctt 56086


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,073,450
Number of Sequences: 3902068
Number of extensions: 5073450
Number of successful extensions: 86512
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86331
Number of HSP's gapped (non-prelim): 181
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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