>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  263 bits (673), Expect = 2e-70
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = +3

Query: 225 MASAFSSTVGAPASTPTIFLGKKVKNYYHGGNKMKSRVVRVMAAKKELDQGKQTDADRWK 404
           MASAFSSTVGAPASTPTIFLGKKVKNYYHGGNKMKSRVVRVMAAKKELDQGKQTDADRWK
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNYYHGGNKMKSRVVRVMAAKKELDQGKQTDADRWK 60

Query: 405 GLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLY 584
           GLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLY
Sbjct: 61  GLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLY 120

Query: 585 IAPAFMDKLI 614
           IAPAFMDKLI
Sbjct: 121 IAPAFMDKLI 130

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  199 bits (506), Expect = 5e-51
 Identities = 101/136 (74%), Positives = 110/136 (80%), Gaps = 6/136 (4%)
 Frame = +3

Query: 225 MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 386
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   S + R     KELD+GKQT
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKS---SNINRFKVMAKELDEGKQT 57

Query: 387 DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 566
           D DRWKGLAYDISDDQQDITRGKG VDSLFQAP GDGTHEA+LSSYEY+SQGLR YDFDN
Sbjct: 58  DQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 567 TMDGLYIAPAFMDKLI 614
           TM G YIAP+FMDKL+
Sbjct: 118 TMGGFYIAPSFMDKLV 133

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  185 bits (470), Expect = 8e-47
 Identities = 98/136 (72%), Positives = 110/136 (80%), Gaps = 6/136 (4%)
 Frame = +3

Query: 225 MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 386
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 58

Query: 387 DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 566
           D  +WKGLAYDISDDQQDITRGKGIVDSLFQAP G GTHEA+LSSYEY+SQGLRKYDFDN
Sbjct: 59  D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDN 116

Query: 567 TMDGLYIAPAFMDKLI 614
           TM G YIAPAFMDKL+
Sbjct: 117 TMGGFYIAPAFMDKLV 132

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  181 bits (459), Expect = 2e-45
 Identities = 94/139 (67%), Positives = 108/139 (77%), Gaps = 9/139 (6%)
 Frame = +3

Query: 225 MASAFSSTVGAPASTPT--IFLGKKVKN-------YYHGGNKMKSRVVRVMAAKKELDQG 377
           MA+AFSSTVGAPASTPT   FLGKK+          YHG +   +   + MAAK E+D+ 
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAK-EVDET 59

Query: 378 KQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYD 557
           KQTD DRWKGLAYDISDDQQDITRGKG+VD+LFQAPMGDGTH A+LSSY+YISQG + Y+
Sbjct: 60  KQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYN 119

Query: 558 FDNTMDGLYIAPAFMDKLI 614
           FDN MDG YIA  FMDKL+
Sbjct: 120 FDNMMDGFYIAKGFMDKLV 138

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  158 bits (400), Expect = 1e-38
 Identities = 82/127 (64%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +3

Query: 240 SSTVGAPASTPTIFLGKKVKNY--YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLA 413
           S  V APAST   FLGKKV     +   NK  +   +V+A K++    KQTD DRW+GLA
Sbjct: 23  SGAVSAPAST---FLGKKVVTVSRFAQSNKKSNGSFKVLAVKED----KQTDGDRWRGLA 75

Query: 414 YDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAP 593
           YD SDDQQDITRGKG+VDS+FQAPMG GTH A+LSSYEY+SQGLR+Y+ DN MDG YIAP
Sbjct: 76  YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAP 135

Query: 594 AFMDKLI 614
           AFMDKL+
Sbjct: 136 AFMDKLV 142

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  155 bits (391), Expect = 1e-37
 Identities = 74/137 (54%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
 Frame = +3

Query: 213 SINTMASAFSSTVGAPASTPTIFLGKKVKNYYHGG---NKMKSRVVRVMAAKKELDQGKQ 383
           ++N    + +++V   +   T F GK +K  Y  G    K+ ++ +R++A + ++D  KQ
Sbjct: 10  AVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQ 69

Query: 384 TDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFD 563
           TD+DRWKGL  D SDDQQDITRGKG+VDSLFQAP G GTH A+L SYEY+SQGLR+Y+ D
Sbjct: 70  TDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLD 129

Query: 564 NTMDGLYIAPAFMDKLI 614
           N +DG YIAPAFMDKL+
Sbjct: 130 NKLDGFYIAPAFMDKLV 146

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  152 bits (384), Expect = 7e-37
 Identities = 80/127 (62%), Positives = 96/127 (75%), Gaps = 2/127 (1%)
 Frame = +3

Query: 240 SSTVGAPASTPTIFLGKKVK--NYYHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLA 413
           SS+   P+ST   FLG  +K  N     +K+ S  +R++A+   +D+ KQTD DRWKGLA
Sbjct: 22  SSSASVPSST---FLGSSLKKVNSRFTNSKVSSGSLRIVAS---VDEDKQTDKDRWKGLA 75

Query: 414 YDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAP 593
           +D SDDQQDITRGKG VDSLFQAP G GTH AI+SSYEYIS GLR+Y+FDN MDG YIAP
Sbjct: 76  FDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAP 135

Query: 594 AFMDKLI 614
           AFMDKL+
Sbjct: 136 AFMDKLV 142

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  152 bits (384), Expect = 7e-37
 Identities = 78/152 (51%), Positives = 102/152 (67%), Gaps = 3/152 (1%)
 Frame = +3

Query: 168 LETTVIKLSAARRERSINTMASAFSSTVGAPASTPTIFLGKKVKNYYHGG---NKMKSRV 338
           + T+V  + AA      N    + +++V   +   T F GK +K  Y  G    K+ +R 
Sbjct: 1   MATSVSTIGAA------NKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRS 54

Query: 339 VRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILS 518
           +R+ A +K+ D  KQT +DRWKGL  D SDDQQDI RGKG+VDSLFQAP G GTH A+L 
Sbjct: 55  LRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQ 114

Query: 519 SYEYISQGLRKYDFDNTMDGLYIAPAFMDKLI 614
           SYEY+SQGLR+Y+ DNT+DG YIAP+FMDKL+
Sbjct: 115 SYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLV 146

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  145 bits (367), Expect = 7e-35
 Identities = 79/145 (54%), Positives = 98/145 (67%), Gaps = 15/145 (10%)
 Frame = +3

Query: 225 MASAFSSTVGAPASTP---------------TIFLGKKVKNYYHGGNKMKSRVVRVMAAK 359
           MA+A+S TVGA    P               T F G  +K       K  S   +++A  
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVA-- 57

Query: 360 KELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQ 539
           +E+ + +QTD D+WKGLAYDISDDQQDITRGKG+VD+LFQAPM  GTH A++SSY+YISQ
Sbjct: 58  QEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQ 117

Query: 540 GLRKYDFDNTMDGLYIAPAFMDKLI 614
           GLR+Y+ DN MDG YIAPAFMDKL+
Sbjct: 118 GLRQYNLDNNMDGFYIAPAFMDKLV 142

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  145 bits (367), Expect = 7e-35
 Identities = 79/145 (54%), Positives = 98/145 (67%), Gaps = 15/145 (10%)
 Frame = +3

Query: 225 MASAFSSTVGAPASTP---------------TIFLGKKVKNYYHGGNKMKSRVVRVMAAK 359
           MA+A+S TVGA    P               T F G  +K       K  S   +++A  
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVA-- 57

Query: 360 KELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQ 539
           +E+ + +QTD D+WKGLAYDISDDQQDITRGKG+VD+LFQAPM  GTH A++SSY+YISQ
Sbjct: 58  QEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQ 117

Query: 540 GLRKYDFDNTMDGLYIAPAFMDKLI 614
           GLR+Y+ DN MDG YIAPAFMDKL+
Sbjct: 118 GLRQYNLDNNMDGFYIAPAFMDKLV 142

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  145 bits (367), Expect = 7e-35
 Identities = 70/137 (51%), Positives = 99/137 (72%), Gaps = 3/137 (2%)
 Frame = +3

Query: 213 SINTMASAFSSTVGAPASTPTIFLG---KKVKNYYHGGNKMKSRVVRVMAAKKELDQGKQ 383
           ++N      + + G  +   + F G   KKV +     +K+ S   +++AA KE+++ +Q
Sbjct: 10  AVNRTLLNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQ 69

Query: 384 TDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFD 563
           T+ DRW+GLAYD+SDDQQDITRGKG+VDSLFQAPM  GTH A++SS++Y+S GLR+Y+FD
Sbjct: 70  TEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFD 129

Query: 564 NTMDGLYIAPAFMDKLI 614
           N  DG YIAPAF+DKL+
Sbjct: 130 NIKDGFYIAPAFLDKLV 146

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  139 bits (351), Expect = 5e-33
 Identities = 72/125 (57%), Positives = 92/125 (73%), Gaps = 4/125 (3%)
 Frame = +3

Query: 252 GAPASTPT-IFLGKKVKNYYHG---GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYD 419
           GA AS PT  F G  +K         +K+ +   +++AA+KE+++ +QT+ DRWKGLAYD
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYD 81

Query: 420 ISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAF 599
           ISDDQQDITRGKG+VD LFQAPM  GTH A++SSYEY+S GLR+   DN  DG YIAPAF
Sbjct: 82  ISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAF 139

Query: 600 MDKLI 614
           +DKL+
Sbjct: 140 LDKLV 144

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  136 bits (343), Expect = 4e-32
 Identities = 68/112 (60%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
 Frame = +3

Query: 279 FLGKKVK-NYYHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGK 455
           FLG ++K +     +KM +   +++A   E D+ KQT+ D+W+GLA+D SDDQQDITRGK
Sbjct: 30  FLGSRLKVSSRFTTSKMVTGNFKIVA---EQDEEKQTEKDKWRGLAFDTSDDQQDITRGK 86

Query: 456 GIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKL 611
           G+ D LFQAPMG GTH A+LSSYEYIS GLR Y +DN +DG YIAPAFMDKL
Sbjct: 87  GLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKL 138

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  133 bits (334), Expect = 5e-31
 Identities = 74/145 (51%), Positives = 94/145 (64%), Gaps = 17/145 (11%)
 Frame = +3

Query: 231 SAFSSTVGAPASTP--------------TIFLGKKVKNYYHGG---NKMKSRVVRVMAAK 359
           +A  ST+GA +  P              T F GK +K  Y  G    K+ +R +RV+A  
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVA-- 59

Query: 360 KELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQ 539
           +E+D+ K+   DRWKGL  + SDDQQDI RGKG+VDSLFQAP G GTH AI++SYEY+SQ
Sbjct: 60  QEVDETKE---DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQ 116

Query: 540 GLRKYDFDNTMDGLYIAPAFMDKLI 614
            L+ Y  DN +DG YIAPAFMDKL+
Sbjct: 117 ALKTYQLDNKLDGFYIAPAFMDKLV 141

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  112 bits (281), Expect = 7e-25
 Identities = 63/121 (52%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = +3

Query: 255 APASTPTI-FLGKKVKNYYHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDD 431
           A AS PT  FLG  +K + +      SR   +     E    ++ + D+W  LA D SDD
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAE---NEEKNTDKWAHLAKDFSDD 79

Query: 432 QQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKL 611
           Q DI RGKG+VDSLFQAP   GTH  I SS+EY SQGLRKYD DN +   YIAPAFMDKL
Sbjct: 80  QLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKL 139

Query: 612 I 614
           +
Sbjct: 140 V 140

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
 Frame = +3

Query: 312 GGNKMKSRVVRVMAAKKELDQGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 485
           GG ++ +R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 16  GGARVATRSVR--RAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 73

Query: 486 MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKL 611
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+
Sbjct: 74  FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKM 114

>MCM2_MOUSE (P97310) DNA replication licensing factor MCM2 (Minichromosome|
           maintenance protein 2 homolog) (Nuclear protein BM28)
          Length = 904

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -2

Query: 443 DVLLVVRDVVGQTLPPVRIGLLALVKFLFGRHDPHHPA 330
           DVL VVRD    T+ PV+  +LA  +F+ G H  HHP+
Sbjct: 658 DVLCVVRD----TVDPVQDEMLA--RFVVGSHVRHHPS 689

>MCM2_HUMAN (P49736) DNA replication licensing factor MCM2 (Minichromosome|
           maintenance protein 2 homolog) (Nuclear protein BM28)
          Length = 904

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = -2

Query: 443 DVLLVVRDVVGQTLPPVRIGLLALVKFLFGRHDPHHPA 330
           D+L VVRD    T+ PV+  +LA  +F+ G H  HHP+
Sbjct: 658 DILCVVRD----TVDPVQDEMLA--RFVVGSHVRHHPS 689

>Y5626_BACAN (Q81JS3) Probable tautomerase BA5626/GBAA5626/BAS5226 (EC 5.3.2.-)|
          Length = 60

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
 Frame = +3

Query: 183 IKLSAARRERSINTMA----SAFSSTVGAPASTPTIFLGKKVKNYYHGGNKMKS 332
           +K+   R E     +A    +A S T GAP     +F+ +  KN+Y  G K  S
Sbjct: 5   VKMLEGRTEEQKKALAEKVTAAVSETTGAPEENIVVFIEEMSKNHYAVGGKRLS 58

>Y5378_BACCR (Q814P5) Probable tautomerase BC_5378 (EC 5.3.2.-)|
          Length = 60

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
 Frame = +3

Query: 183 IKLSAARRERSINTMA----SAFSSTVGAPASTPTIFLGKKVKNYYHGGNKMKS 332
           +K+   R E     +A    +A S T GAP     +F+ +  KN+Y  G K  S
Sbjct: 5   VKMLEGRTEEQKKALAEKVTAAVSETTGAPEENIVVFIEEMSKNHYAVGGKRLS 58


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,613,231
Number of Sequences: 219361
Number of extensions: 1515290
Number of successful extensions: 4359
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4353
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)