ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63e17 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 279 bits (714), Expect = 3e-75 Identities = 143/169 (84%), Positives = 143/169 (84%) Frame = +2 Query: 2 IRRAPGTAHLQTMSTAAANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTTXXX 181 I PG STAAANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTT Sbjct: 55 IAALPGPRTTSHYSTAAANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTTPVQ 114 Query: 182 XXXXXXXXXXXXXERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSV 361 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSV Sbjct: 115 AAPVAPALMDAAVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSV 174 Query: 362 TLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 TLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI Sbjct: 175 TLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 223
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 130 bits (328), Expect = 2e-30 Identities = 64/96 (66%), Positives = 75/96 (78%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 +R+K GF KFK E Y+K P + L GQAPK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 113 QRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVR 172 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 NIANMVP + K+KYAGVG+AIEYAV LKVE IVVI Sbjct: 173 NIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVI 208
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 130 bits (327), Expect = 2e-30 Identities = 63/96 (65%), Positives = 74/96 (77%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 E +K GF FKTE Y+K P + L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 115 EHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVR 174 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 NIANMVPAY K +Y+GVG+AIEYAV LKVE IVVI Sbjct: 175 NIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVI 210
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 124 bits (312), Expect = 1e-28 Identities = 71/141 (50%), Positives = 82/141 (58%) Frame = +2 Query: 86 ARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXERLKTGFEKFKTEVY 265 A+ I A L + S S SF P ER+K GF FK E Y Sbjct: 29 AKVKKITAELQAASSSDSKSFDP---------------------VERIKEGFVTFKKEKY 67 Query: 266 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 445 + P + L GQ+PKYMVFAC+DSRVCPS L PG+AF +RNIANMVP + K KYA Sbjct: 68 ETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYA 127 Query: 446 GVGSAIEYAVCALKVEVIVVI 508 GVG+AIEYAV LKVE IVVI Sbjct: 128 GVGAAIEYAVLHLKVENIVVI 148
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 124 bits (312), Expect = 1e-28 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VI Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVI 219
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 124 bits (312), Expect = 1e-28 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VI Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVI 219
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 124 bits (312), Expect = 1e-28 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VI Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVI 219
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 124 bits (311), Expect = 1e-28 Identities = 58/96 (60%), Positives = 74/96 (77%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 123 ERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 182 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VI Sbjct: 183 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVI 218
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 123 bits (309), Expect = 3e-28 Identities = 60/96 (62%), Positives = 71/96 (73%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 ER+KTGF FK E YDK P + L GQ+P +MVFAC+DSRVCPS L +PGEAF +R Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 N+AN+VP Y + KYAG G+AIEYAV LKV IVVI Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVI 217
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 123 bits (308), Expect = 3e-28 Identities = 61/96 (63%), Positives = 71/96 (73%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 E +K GF KFK E Y+ P + L GQ+PKYMVFAC+DSRVCPS L +PG+AF +R Sbjct: 130 ETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVR 189 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVI 508 NIANMVP + K KY GVG+AIEYAV LKVE IVVI Sbjct: 190 NIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVI 225
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 100 bits (249), Expect = 2e-21 Identities = 49/78 (62%), Positives = 59/78 (75%) Frame = +2 Query: 275 PDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVG 454 P + L GQ+PK++VFAC+DSRVCPS L +PGEAF +RNIANMVP Y K++G G Sbjct: 2 PTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAG 61 Query: 455 SAIEYAVCALKVEVIVVI 508 +AIEYAV LKVE IVVI Sbjct: 62 AAIEYAVLHLKVENIVVI 79
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 76.3 bits (186), Expect = 5e-14 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +2 Query: 236 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 415 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 416 VPAYCKNKYAGVGSAIEYAVCALKVEVIVV 505 VP+Y GV +++EYAV AL+V IV+ Sbjct: 67 VPSYGPEP-GGVSASVEYAVAALRVSDIVI 95
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 76.3 bits (186), Expect = 5e-14 Identities = 37/90 (41%), Positives = 56/90 (62%) Frame = +2 Query: 236 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 415 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 416 VPAYCKNKYAGVGSAIEYAVCALKVEVIVV 505 VP+Y GV +++EYAV AL+V IV+ Sbjct: 67 VPSYGPEP-GGVSASVEYAVAALRVSDIVI 95
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 72.8 bits (177), Expect = 5e-13 Identities = 37/95 (38%), Positives = 55/95 (57%) Frame = +2 Query: 221 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 400 +RL G +KF+ + D FE L GQ P+ + C+DSRV P++ E G+ F IR Sbjct: 2 QRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIR 61 Query: 401 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVV 505 N N++P Y G G+A+EYA+ AL++ I+V Sbjct: 62 NAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIV 95
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 69.7 bits (169), Expect = 4e-12 Identities = 35/94 (37%), Positives = 51/94 (54%) Frame = +2 Query: 224 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN 403 +L G F+T Y D FE GQ P+ + C+DSR+ P++ GE F IRN Sbjct: 3 KLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRN 62 Query: 404 IANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVV 505 N++P + G G++IEYA+ AL +E +VV Sbjct: 63 AGNLIPPFGAAN-GGEGASIEYAIAALNIEHVVV 95
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 60.8 bits (146), Expect = 2e-09 Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 1/91 (1%) Frame = +2 Query: 236 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 415 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + IRN+ N+ Sbjct: 6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNV 65 Query: 416 VPAYCKNKYA-GVGSAIEYAVCALKVEVIVV 505 +P K + +++EYA+ + V+ +++ Sbjct: 66 IPPKTSYKESLSTIASVEYAIAHVGVQNLII 96
>CAN_SHIFL (P61518) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/80 (41%), Positives = 46/80 (57%) Frame = +2 Query: 266 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 445 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V N Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78 Query: 446 GVGSAIEYAVCALKVEVIVV 505 S ++YAV L+VE I++ Sbjct: 79 ---SVVQYAVDVLEVEHIII 95
>CAN_ECOLI (P61517) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 59.7 bits (143), Expect = 4e-09 Identities = 33/80 (41%), Positives = 46/80 (57%) Frame = +2 Query: 266 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 445 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V N Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78 Query: 446 GVGSAIEYAVCALKVEVIVV 505 S ++YAV L+VE I++ Sbjct: 79 ---SVVQYAVDVLEVEHIII 95
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 55.8 bits (133), Expect = 6e-08 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%) Frame = +2 Query: 236 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 415 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + I N+ N+ Sbjct: 6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNV 65 Query: 416 VPAYCKNKYA-GVGSAIEYAVCALKVEVIVV 505 P K + ++IEYA+ + V+ +++ Sbjct: 66 NPPKTSYKESLSTIASIEYAIAHVGVQNLII 96
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 52.0 bits (123), Expect = 9e-07 Identities = 30/80 (37%), Positives = 42/80 (52%) Frame = +2 Query: 266 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 445 ++ +F+ L Q P Y+ C+DSRV LEPGE F RN+AN V N Sbjct: 20 EENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCL- 78 Query: 446 GVGSAIEYAVCALKVEVIVV 505 S ++YAV LK+E I++ Sbjct: 79 ---SVVQYAVDVLKIEHIII 95
>NCE3_YEAST (P53615) Non-classical export protein 3| Length = 221 Score = 47.4 bits (111), Expect = 2e-05 Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%) Frame = +2 Query: 245 KFKTEVYDKKPDFFEPLKA-GQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVP 421 K+ +++ + +P F A GQ+P + C+DSR + LG+ PGE FT +N+AN+ Sbjct: 27 KWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENC-LGVLPGEVFTWKNVANI-- 83 Query: 422 AYCKNKYAGVGSAIEYAVCALKVEVIVV 505 C ++ + + +E+A+ LKV +++ Sbjct: 84 --CHSEDLTLKATLEFAIICLKVNKVII 109
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +3 Query: 357 RSPWALSPVRPSPSATSPTWSRPTARTSTPVLDRPS 464 +SP A SP SP A SPT PTA+ +PV P+ Sbjct: 628 KSPTAKSPEAKSPEAKSPTAKSPTAK--SPVAKSPT 661 Score = 30.0 bits (66), Expect = 3.8 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +3 Query: 357 RSPWALSPVRPSPSATSPTWSRPTARTSTP 446 +SP A SP SP+A SPT P A++ P Sbjct: 663 KSPEAKSPEAKSPTAKSPTAKSPAAKSPAP 692 Score = 29.6 bits (65), Expect = 5.0 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 357 RSPWALSPVRPSPSATSPTWSRPTART 437 +SP A SP SP A SPT PTA++ Sbjct: 658 KSPTAKSPEAKSPEAKSPTAKSPTAKS 684 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +3 Query: 339 TRVCARRSPWALSPVRPSPSATSPTWSRPTARTST 443 T+ +SP A SP SP+A SPT P A++ T Sbjct: 627 TKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPT 661 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 357 RSPWALSPVRPSPSATSPTWSRPTARTST 443 +SP A SP SP A SP PTA++ T Sbjct: 653 KSPVAKSPTAKSPEAKSPEAKSPTAKSPT 681 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +3 Query: 357 RSPWALSPVRPSPSATSPTWSRPTARTST 443 +SP A SPV SP+A SP P A++ T Sbjct: 648 KSPTAKSPVAKSPTAKSPEAKSPEAKSPT 676
>COBV_PSEDE (P29936) Cobalamin synthase (EC 2.-.-.-)| Length = 262 Score = 30.0 bits (66), Expect = 3.8 Identities = 15/34 (44%), Positives = 24/34 (70%) Frame = +2 Query: 38 MSTAAANWCYATVAPRARSSTIAASLGTPAPSSS 139 +S AA W ++++ P ARSS +AAS G P P+++ Sbjct: 156 LSRAAMVWHWSSLPP-ARSSGVAASAGEPEPAAT 188
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 26.6 bits (57), Expect(2) = 4.7 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +1 Query: 172 PRPGRARRTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACV 351 P+PG G R GAP+ G + R + QGRPG Q G +R Sbjct: 164 PKPG--------GARPGAPKPGGARPSGPG---QDRGQQGGQGRPGGQRPGAPAQR---- 208 Query: 352 PVGHPG 369 P G PG Sbjct: 209 PGGRPG 214 Score = 21.6 bits (44), Expect(2) = 4.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +2 Query: 71 TVAPRARSSTIAASLGTPAPSSSASFRP 154 + AP+A ++ A+ PAP+ S RP Sbjct: 100 SAAPKAPAAQQPAAPSAPAPAPSQGPRP 127
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 29.6 bits (65), Expect = 5.0 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = +3 Query: 333 APTRVCARRSPWALSPV----RPSPSATSPTWSR--PTARTSTPVLDRPSNT 470 +PT +P A SP P+P+ATSPT + PT+ +TP + S T Sbjct: 522 SPTPAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPT 573
>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1190 Score = 29.3 bits (64), Expect = 6.5 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +3 Query: 336 PTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPV 449 P+ V +P A + P P A PT+ R + STP+ Sbjct: 1019 PSAVAGNETPGASTKGYPPPVAAKPTFGRSILKPSTPI 1056
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 6.5 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +3 Query: 333 APTRVCARRSPWALSPVRPSPSATSPTWSRPTA-RTSTPVLDRPS 464 AP A P P P P+A P ++PTA + +TP P+ Sbjct: 97 APKPGTAAAKPTPAKPAAPKPTAAKPAPAKPTAPKPATPAFSGPT 141
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 6.5 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 193 RTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLA 345 R+ +D RRR + ++REV++R E RA + A+ H RR A Sbjct: 153 RSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQA 203
>YA28_SCHPO (Q09699) Hypothetical protein C2F7.08c in chromosome I| Length = 632 Score = 29.3 bits (64), Expect = 6.5 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +1 Query: 232 DRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACVPVGH 363 D E QDRG +EAR +R QGR HG+ + L +P H Sbjct: 366 DAEMERQDRGYDREARRMRRRQGR---AKHGIMLPDLRDIPKIH 406
>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor| Length = 307 Score = 28.9 bits (63), Expect = 8.5 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = +3 Query: 324 CSRAPTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPVLDRPSNT 470 C+ T P P P+ T PT ++PT T+ P +P+ T Sbjct: 140 CTTPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPT--TTKPTTTKPTTT 186
>Y1315_MYCBO (P64798) Hypothetical protein Mb1315| Length = 163 Score = 28.9 bits (63), Expect = 8.5 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 266 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 418 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 63
>Y1284_MYCTU (P64797) Hypothetical protein Rv1284/MT1322| Length = 163 Score = 28.9 bits (63), Expect = 8.5 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 266 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMV 418 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVV 63
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 28.9 bits (63), Expect = 8.5 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +2 Query: 35 TMSTAAANWCYATVAPRARSSTIAASLGTPAPSSSASFR 151 T STA A AT + A SS++++S + + SSS+ FR Sbjct: 322 TASTAIAATTAATASSSASSSSLSSSSSSSSSSSSSQFR 360 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,808,717 Number of Sequences: 219361 Number of extensions: 1094307 Number of successful extensions: 4858 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4810 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
