ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62p07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
2gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genom... 119 1e-23
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 119 1e-23
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
5ref|NM_191352.1| Oryza sativa (japonica cultivar-group), predic... 84 6e-13
6dbj|AK066596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
7dbj|AK061563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
9dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
10dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic D... 64 6e-07
11gb|AY104313.1| Zea mays PCO093744 mRNA sequence 60 9e-06
12ref|NM_120885.2| Arabidopsis thaliana glycerophosphodiester phos... 46 0.13
13gb|AC093136.3| Pan troglodytes clone RP43-116L11, complete sequence 46 0.13
14gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complet... 46 0.13
15gb|BT023450.1| Arabidopsis thaliana At5g08030 gene, complete cds 46 0.13
16gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromoso... 46 0.13
17gb|AC146373.5| Pan troglodytes BAC clone RP43-60G24 from 7, comp... 44 0.51
18gb|AC079355.6| Homo sapiens BAC clone CTD-2526L21 from 7, comple... 44 0.51
19gb|AC118758.3| Homo sapiens BAC clone RP13-580B18 from 7, comple... 44 0.51
20emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chr... 44 0.51
21gb|AC159986.4| Pan troglodytes BAC clone CH251-6M11 from chromos... 44 0.51
22emb|CR388054.11| Zebrafish DNA sequence from clone CH211-82E18 i... 42 2.0
23gb|AC125360.4| Mus musculus BAC clone RP23-58E21 from 12, comple... 42 2.0
24emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in l... 42 2.0
25emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in l... 42 2.0
26emb|Z17220.1|CGPERAF1 C.griseus mRNA for peroxisome assembly fac... 42 2.0
27dbj|D30618.1|HAMPAF1C Cricetulus griseus PAF-1 mRNA for peroxiso... 42 2.0
28dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:C... 42 2.0
29dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.0
30gb|AY510455.1| Aspergillus flavus isolate AF36 aflatoxin biosynt... 40 8.0
31ref|NM_111863.1| Arabidopsis thaliana acyltransferase AT3G10280 ... 40 8.0
32ref|NM_130237.2| Arabidopsis thaliana HIC (HIGH CARBON DIOXIDE);... 40 8.0
33gb|AY510451.1| Aspergillus flavus isolate AF13 aflatoxin biosynt... 40 8.0
34gb|AY510453.1| Aspergillus flavus isolate AF70 aflatoxin biosynt... 40 8.0
35gb|AC136091.2| Rattus norvegicus 18 BAC CH230-329A5 (Children's ... 40 8.0
36gb|L48183.3|ASNFAS1A Aspergillus parasiticus fatty acid syntheta... 40 8.0
37gb|AY371490.1| Aspergillus parasiticus aflatoxin pathway gene cl... 40 8.0
38gb|AY539897.1| Rattus norvegicus LRRGT00146 mRNA, complete cds 40 8.0
39gb|AC139360.8| Mus musculus chromosome 3, clone RP23-324F4, comp... 40 8.0
40emb|BX323815.12| Zebrafish DNA sequence from clone DKEY-148J13 i... 40 8.0
41gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome ... 40 8.0
42gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome... 40 8.0
43gb|AC114000.5| Mus musculus BAC clone RP23-161K1 from chromosome... 40 8.0
44gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 40 8.0
45gb|AC126460.4| Mus musculus BAC clone RP23-187E3 from 3, complet... 40 8.0
46gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 ma... 40 8.0
47emb|AL357354.10| Human DNA sequence from clone RP11-465C5 on chr... 40 8.0
48emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chr... 40 8.0
49emb|AL022725.8|HS430A16 Human DNA sequence from clone RP3-430A16... 40 8.0
50gb|AC142454.4| Mus musculus BAC clone RP23-313G1 from chromosome... 40 8.0
51emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BA... 40 8.0
52emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, B... 40 8.0
53emb|BX323793.10| Zebrafish DNA sequence from clone DKEY-185P18 i... 40 8.0
54dbj|AB196490.1| Aspergillus oryzae DNA, aflatoxin biosynthesis g... 40 8.0
55dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 8.0
56gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map ... 40 8.0
57gb|AF391094.1| Aspergillus parasiticus fatty acid synthase alpha... 40 8.0
58gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, comple... 40 8.0
59gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 8.0
60gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 ma... 40 8.0
61emb|BX830013.1|CNS0A1JL Arabidopsis thaliana Full-length cDNA Co... 40 8.0
62gb|AF188486.1|AF188486 Arabidopsis thaliana putative 3-keto-acyl... 40 8.0
63gb|AF188485.1|AF188485 Arabidopsis thaliana putative 3-keto-acyl... 40 8.0
64gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C... 40 8.0
65ref|XM_576237.1| PREDICTED: Rattus norvegicus similar to LRRGT00... 40 8.0
66emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 ... 40 8.0
67gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, compl... 40 8.0
68emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chr... 40 8.0
69dbj|AB061271.2| Zea mays ZmNAS2 mRNA, complete cds 40 8.0
70gb|U64985.1|APU64985 Anas platyrhynchos serum amyloid A gene, co... 40 8.0
71gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complet... 40 8.0
72emb|AL713897.7| Mouse DNA sequence from clone RP23-373J8 on chro... 40 8.0
73emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chr... 40 8.0
74gb|K03152.1|PHVLBA Phaseolus vulgaris (kidney bean) leghemoglobi... 40 8.0
75dbj|AB004549.1| Phaseolus vulgaris DNA for leghemoglobin, comple... 40 8.0

>dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P17, full
            insert sequence
          Length = 1475

 Score =  194 bits (98), Expect = 2e-46
 Identities = 294/358 (82%), Gaps = 1/358 (0%)
 Strand = Plus / Plus

                                                                        
Query: 28   gtcatactatgagataacttcgaacgattatctcacgttcataaggaagtacgtaattgg 87
            ||||||||| |||||||||||| ||| ||| ||  ||||||||||||||||| || ||||
Sbjct: 879  gtcatactacgagataacttcggacgcttaccttgcgttcataaggaagtacatagttgg 938

                                                                        
Query: 88   gattgggccatggaaggatacaatcattccccccgagaataaccatttaggccctgcaac 147
             ||||| |||||||| ||||||||  |||| |||   |||||  |  |||| ||  ||||
Sbjct: 939  cattggaccatggaaagatacaattgttcctcccataaataattacctaggtcccccaac 998

                                                                        
Query: 148  cgatctcgtggcacgggcacatgctctgaatcttcaggtgcatccatacacattcagaaa 207
            |||||| || || || ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 999  cgatcttgtcgcgcgagcacacgctctgaatcttcaggtgcatccatacactttcagaaa 1058

                                                                        
Query: 208  tgagaacaaattcttgcatttcaacttccatcaagacccttatgctgaatatgagtactg 267
             |||||||  |||||||| ||| ||||||| ||||||||||||  ||| || ||||| ||
Sbjct: 1059 cgagaacatgttcttgcacttcgacttccaccaagacccttatcttgagtacgagtattg 1118

                                                                        
Query: 268  ggtcagagagatcggagtcgacgcgctgttcaccgatttcaccggcagcttgcacaagta 327
            | || | ||||| || ||||||| ||| ||||| |||||||| || | |||||||| || 
Sbjct: 1119 gctcggtgagattggcgtcgacgggcttttcactgatttcactggtaccttgcacaggtt 1178

                                                                      
Query: 328  ccaggagtggacaactccacaccaaaagaaggaaaagaaatgcagaggaactcctgca 385
            |||||| || ||||||||  | | |||||| |||||| |||||||||| |||| ||||
Sbjct: 1179 ccaggaatgcacaactccgtatccaaagaatgaaaag-aatgcagaggcactcttgca 1235



to top

>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score =  119 bits (60), Expect = 1e-23
 Identities = 169/204 (82%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                         
Query: 182   caggtgcatccatacacattcagaaatgagaacaaattcttgcatttcaacttccatcaa 241
             ||||||||||||||||| |||||||| |||||||  |||||||| ||| ||||||| |||
Sbjct: 22211 caggtgcatccatacactttcagaaacgagaacatgttcttgcacttcgacttccaccaa 22270

                                                                         
Query: 242   gacccttatgctgaatatgagtactgggtcagagagatcggagtcgacgcgctgttcacc 301
             |||||||||  ||| || ||||| ||| || | ||||| || ||||||| ||| ||||| 
Sbjct: 22271 gacccttatcttgagtacgagtattggctcggtgagattggcgtcgacgggcttttcact 22330

                                                                         
Query: 302   gatttcaccggcagcttgcacaagtaccaggagtggacaactccacaccaaaagaaggaa 361
             |||||||| || | |||||||| || |||||| || ||||||||  | | |||||| |||
Sbjct: 22331 gatttcactggtaccttgcacaggttccaggaatgcacaactccgtatccaaagaatgaa 22390

                                     
Query: 362   aagaaatgcagaggaactcctgca 385
             ||| |||||||||| |||| ||||
Sbjct: 22391 aag-aatgcagaggcactcttgca 22413



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 130/159 (81%)
 Strand = Plus / Plus

                                                                         
Query: 28    gtcatactatgagataacttcgaacgattatctcacgttcataaggaagtacgtaattgg 87
             ||||||||| |||||||||||| ||| ||| ||  ||||||||||||||||| || ||||
Sbjct: 21930 gtcatactacgagataacttcggacgcttaccttgcgttcataaggaagtacatagttgg 21989

                                                                         
Query: 88    gattgggccatggaaggatacaatcattccccccgagaataaccatttaggccctgcaac 147
              ||||| |||||||| ||||||||  |||| |||   |||||  |  |||| ||  ||||
Sbjct: 21990 cattggaccatggaaagatacaattgttcctcccataaataattacctaggtcccccaac 22049

                                                    
Query: 148   cgatctcgtggcacgggcacatgctctgaatcttcaggt 186
             |||||| || || || ||||| |||||||||||||||||
Sbjct: 22050 cgatcttgtcgcgcgagcacacgctctgaatcttcaggt 22088



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 1e-23
 Identities = 169/204 (82%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                            
Query: 182      caggtgcatccatacacattcagaaatgagaacaaattcttgcatttcaacttccatcaa 241
                ||||||||||||||||| |||||||| |||||||  |||||||| ||| ||||||| |||
Sbjct: 22426964 caggtgcatccatacactttcagaaacgagaacatgttcttgcacttcgacttccaccaa 22427023

                                                                            
Query: 242      gacccttatgctgaatatgagtactgggtcagagagatcggagtcgacgcgctgttcacc 301
                |||||||||  ||| || ||||| ||| || | ||||| || ||||||| ||| ||||| 
Sbjct: 22427024 gacccttatcttgagtacgagtattggctcggtgagattggcgtcgacgggcttttcact 22427083

                                                                            
Query: 302      gatttcaccggcagcttgcacaagtaccaggagtggacaactccacaccaaaagaaggaa 361
                |||||||| || | |||||||| || |||||| || ||||||||  | | |||||| |||
Sbjct: 22427084 gatttcactggtaccttgcacaggttccaggaatgcacaactccgtatccaaagaatgaa 22427143

                                        
Query: 362      aagaaatgcagaggaactcctgca 385
                ||| |||||||||| |||| ||||
Sbjct: 22427144 aag-aatgcagaggcactcttgca 22427166



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 130/159 (81%)
 Strand = Plus / Plus

                                                                            
Query: 28       gtcatactatgagataacttcgaacgattatctcacgttcataaggaagtacgtaattgg 87
                ||||||||| |||||||||||| ||| ||| ||  ||||||||||||||||| || ||||
Sbjct: 22426683 gtcatactacgagataacttcggacgcttaccttgcgttcataaggaagtacatagttgg 22426742

                                                                            
Query: 88       gattgggccatggaaggatacaatcattccccccgagaataaccatttaggccctgcaac 147
                 ||||| |||||||| ||||||||  |||| |||   |||||  |  |||| ||  ||||
Sbjct: 22426743 cattggaccatggaaagatacaattgttcctcccataaataattacctaggtcccccaac 22426802

                                                       
Query: 148      cgatctcgtggcacgggcacatgctctgaatcttcaggt 186
                |||||| || || || ||||| |||||||||||||||||
Sbjct: 22426803 cgatcttgtcgcgcgagcacacgctctgaatcttcaggt 22426841



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 1e-23
 Identities = 169/204 (82%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                            
Query: 182      caggtgcatccatacacattcagaaatgagaacaaattcttgcatttcaacttccatcaa 241
                ||||||||||||||||| |||||||| |||||||  |||||||| ||| ||||||| |||
Sbjct: 22419993 caggtgcatccatacactttcagaaacgagaacatgttcttgcacttcgacttccaccaa 22420052

                                                                            
Query: 242      gacccttatgctgaatatgagtactgggtcagagagatcggagtcgacgcgctgttcacc 301
                |||||||||  ||| || ||||| ||| || | ||||| || ||||||| ||| ||||| 
Sbjct: 22420053 gacccttatcttgagtacgagtattggctcggtgagattggcgtcgacgggcttttcact 22420112

                                                                            
Query: 302      gatttcaccggcagcttgcacaagtaccaggagtggacaactccacaccaaaagaaggaa 361
                |||||||| || | |||||||| || |||||| || ||||||||  | | |||||| |||
Sbjct: 22420113 gatttcactggtaccttgcacaggttccaggaatgcacaactccgtatccaaagaatgaa 22420172

                                        
Query: 362      aagaaatgcagaggaactcctgca 385
                ||| |||||||||| |||| ||||
Sbjct: 22420173 aag-aatgcagaggcactcttgca 22420195



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 130/159 (81%)
 Strand = Plus / Plus

                                                                            
Query: 28       gtcatactatgagataacttcgaacgattatctcacgttcataaggaagtacgtaattgg 87
                ||||||||| |||||||||||| ||| ||| ||  ||||||||||||||||| || ||||
Sbjct: 22419712 gtcatactacgagataacttcggacgcttaccttgcgttcataaggaagtacatagttgg 22419771

                                                                            
Query: 88       gattgggccatggaaggatacaatcattccccccgagaataaccatttaggccctgcaac 147
                 ||||| |||||||| ||||||||  |||| |||   |||||  |  |||| ||  ||||
Sbjct: 22419772 cattggaccatggaaagatacaattgttcctcccataaataattacctaggtcccccaac 22419831

                                                       
Query: 148      cgatctcgtggcacgggcacatgctctgaatcttcaggt 186
                |||||| || || || ||||| |||||||||||||||||
Sbjct: 22419832 cgatcttgtcgcgcgagcacacgctctgaatcttcaggt 22419870



to top

>ref|NM_191352.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1176

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                        
Query: 164  gcacatgctctgaatcttcaggtgcatccatacacattcagaaatgagaacaaattcttg 223
            ||||||||||  ||||||||||| || || ||||||| ||| || |||||| ||||| ||
Sbjct: 919  gcacatgctcataatcttcaggtacacccgtacacatacaggaacgagaaccaattcctg 978

                                                  
Query: 224  catttcaacttccatcaagacccttatgctgaatatga 261
            ||  ||||||||||||| |||||||||||||| |||||
Sbjct: 979  cacctcaacttccatcaggacccttatgctgagtatga 1016



to top

>dbj|AK066596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070K24, full
            insert sequence
          Length = 1618

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                        
Query: 164  gcacatgctctgaatcttcaggtgcatccatacacattcagaaatgagaacaaattcttg 223
            ||||||||||  ||||||||||| || || ||||||| ||| || |||||| ||||| ||
Sbjct: 1106 gcacatgctcataatcttcaggtacacccgtacacatacaggaacgagaaccaattcctg 1165

                                                  
Query: 224  catttcaacttccatcaagacccttatgctgaatatga 261
            ||  ||||||||||||| |||||||||||||| |||||
Sbjct: 1166 cacctcaacttccatcaggacccttatgctgagtatga 1203



to top

>dbj|AK061563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E04, full
            insert sequence
          Length = 1400

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                        
Query: 164  gcacatgctctgaatcttcaggtgcatccatacacattcagaaatgagaacaaattcttg 223
            ||||||||||  ||||||||||| || || ||||||| ||| || |||||| ||||| ||
Sbjct: 1062 gcacatgctcataatcttcaggtacacccgtacacatacaggaacgagaaccaattcctg 1121

                                                  
Query: 224  catttcaacttccatcaagacccttatgctgaatatga 261
            ||  ||||||||||||| |||||||||||||| |||||
Sbjct: 1122 cacctcaacttccatcaggacccttatgctgagtatga 1159



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                            
Query: 194      tacacattcagaaatgagaacaaattcttgcatttcaacttccatcaagacccttatgct 253
                ||||||| ||| || |||||| ||||| ||||  ||||||||||||| ||||||||||||
Sbjct: 32129768 tacacatacaggaacgagaaccaattcctgcacctcaacttccatcaggacccttatgct 32129827

                        
Query: 254      gaatatga 261
                || |||||
Sbjct: 32129828 gagtatga 32129835



to top

>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0512C01
          Length = 176261

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 194    tacacattcagaaatgagaacaaattcttgcatttcaacttccatcaagacccttatgct 253
              ||||||| ||| || |||||| ||||| ||||  ||||||||||||| ||||||||||||
Sbjct: 171582 tacacatacaggaacgagaaccaattcctgcacctcaacttccatcaggacccttatgct 171641

                      
Query: 254    gaatatga 261
              || |||||
Sbjct: 171642 gagtatga 171649



to top

>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
           PAC clone:P0403C05
          Length = 151085

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 194 tacacattcagaaatgagaacaaattcttgcatttcaacttccatcaagacccttatgct 253
           ||||||| ||| || |||||| ||||| ||||  ||||||||||||| ||||||||||||
Sbjct: 521 tacacatacaggaacgagaaccaattcctgcacctcaacttccatcaggacccttatgct 580

                   
Query: 254 gaatatga 261
           || |||||
Sbjct: 581 gagtatga 588



to top

>gb|AY104313.1| Zea mays PCO093744 mRNA sequence
          Length = 1823

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                        
Query: 149  gatctcgtggcacgggcacatgctctgaatcttcaggtgcatccatacacattcagaaat 208
            ||||| || ||||||||||||||||  ||||| ||||| ||||||||||| | ||| || 
Sbjct: 1122 gatcttgtcgcacgggcacatgctcataatctccaggtacatccatacacgtacaggaac 1181

                                      
Query: 209  gagaacaaattcttgcatttcaactt 234
            |||||| | ||| |||| ||||||||
Sbjct: 1182 gagaaccagttcctgcacttcaactt 1207



to top

>ref|NM_120885.2| Arabidopsis thaliana glycerophosphodiester phosphodiesterase
           AT5G08030 mRNA, complete cds
          Length = 1238

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 176 aatcttcaggtgcatccatacacattcagaaatgagaac 214
           ||||||||||| ||||||||||||| | | |||||||||
Sbjct: 931 aatcttcaggtccatccatacacataccgtaatgagaac 969



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 80  gtaattgggattgggccatggaaggatacaat 111
           |||||||||||||| |||||||| || |||||
Sbjct: 835 gtaattgggattggtccatggaaagacacaat 866



to top

>gb|AC093136.3| Pan troglodytes clone RP43-116L11, complete sequence
          Length = 179629

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 464    ctatttcattattgttagtacggagaaaatg 494
              ||||||||||||||| ||||| |||||||||
Sbjct: 153697 ctatttcattattgtcagtacagagaaaatg 153727



to top

>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence
          Length = 240379

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 464    ctatttcattattgttagtacggagaaaatg 494
              ||||||||||||||| ||||| |||||||||
Sbjct: 186838 ctatttcattattgtcagtacagagaaaatg 186808



to top

>gb|BT023450.1| Arabidopsis thaliana At5g08030 gene, complete cds
          Length = 1225

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 176 aatcttcaggtgcatccatacacattcagaaatgagaac 214
           ||||||||||| ||||||||||||| | | |||||||||
Sbjct: 942 aatcttcaggtccatccatacacataccgtaatgagaac 980



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 80  gtaattgggattgggccatggaaggatacaat 111
           |||||||||||||| |||||||| || |||||
Sbjct: 846 gtaattgggattggtccatggaaagacacaat 877



to top

>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete sequence
          Length = 217260

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 464    ctatttcattattgttagtacggagaaaatg 494
              ||||||||||||||| ||||| |||||||||
Sbjct: 157562 ctatttcattattgtcagtacagagaaaatg 157532



to top

>gb|AC146373.5| Pan troglodytes BAC clone RP43-60G24 from 7, complete sequence
          Length = 151517

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 465   tatttcattattgttagtacggagaaaatg 494
             |||||||||||||| ||||| |||||||||
Sbjct: 28160 tatttcattattgtcagtacagagaaaatg 28189



to top

>gb|AC079355.6| Homo sapiens BAC clone CTD-2526L21 from 7, complete sequence
          Length = 140241

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 465    tatttcattattgttagtacggagaaaatg 494
              |||||||||||||| ||||| |||||||||
Sbjct: 115002 tatttcattattgtcagtacagagaaaatg 114973



to top

>gb|AC118758.3| Homo sapiens BAC clone RP13-580B18 from 7, complete sequence
          Length = 150813

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 465   tatttcattattgttagtacggagaaaatg 494
             |||||||||||||| ||||| |||||||||
Sbjct: 23599 tatttcattattgtcagtacagagaaaatg 23628



to top

>emb|AL354794.16| Human DNA sequence from clone RP11-203L2 on chromosome 9q21.11-21.2
             Contains the 5' end of the PIP5K1B gene for
             phosphatidylinositol-4-phosphate 5-kinase, type I, beta
             (MSS4, STM7), a novel gene (MGC17374), a adaptor-related
             protein complex 3, mu 2 subunit (P47B, AP47B, CLA20)
             (AP3M2) pseudogene, the 3' end of a novel gene and 2 CpG
             islands, complete sequence
          Length = 154071

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 351   aaaagaaggaaaagaaatgcagaggaactc 380
             ||||||| ||||||||||||||| ||||||
Sbjct: 29586 aaaagaaagaaaagaaatgcagatgaactc 29615



to top

>gb|AC159986.4| Pan troglodytes BAC clone CH251-6M11 from chromosome 7, complete
             sequence
          Length = 165482

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 465   tatttcattattgttagtacggagaaaatg 494
             |||||||||||||| ||||| |||||||||
Sbjct: 75958 tatttcattattgtcagtacagagaaaatg 75929



to top

>emb|CR388054.11| Zebrafish DNA sequence from clone CH211-82E18 in linkage group 1,
              complete sequence
          Length = 162569

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     aattgggattgggccatggaa 102
              |||||||||||||||||||||
Sbjct: 120419 aattgggattgggccatggaa 120439



to top

>gb|AC125360.4| Mus musculus BAC clone RP23-58E21 from 12, complete sequence
          Length = 170040

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 351   aaaagaaggaaaagaaatgcagagg 375
             |||||||| ||||||||||||||||
Sbjct: 38308 aaaagaagtaaaagaaatgcagagg 38284



to top

>emb|BX284697.8| Zebrafish DNA sequence from clone DKEY-7M11 in linkage group 1, complete
              sequence
          Length = 209946

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     aattgggattgggccatggaa 102
              |||||||||||||||||||||
Sbjct: 131042 aattgggattgggccatggaa 131022



to top

>emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in linkage group 1,
             complete sequence
          Length = 195436

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    aattgggattgggccatggaa 102
             |||||||||||||||||||||
Sbjct: 82162 aattgggattgggccatggaa 82142



to top

>emb|Z17220.1|CGPERAF1 C.griseus mRNA for peroxisome assembly factor 1
          Length = 1244

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 7   ttccaactcaagataccaacc 27
           |||||||||||||||||||||
Sbjct: 267 ttccaactcaagataccaacc 287



to top

>dbj|D30618.1|HAMPAF1C Cricetulus griseus PAF-1 mRNA for peroxisome assembly factor-1,
           complete cds
          Length = 945

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 7   ttccaactcaagataccaacc 27
           |||||||||||||||||||||
Sbjct: 267 ttccaactcaagataccaacc 287



to top

>dbj|AP000485.5| Homo sapiens genomic DNA, chromosome 11, clone:CMB9-21L24, complete
             sequence
          Length = 139072

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 501   ttaatactagtactattctat 521
             |||||||||||||||||||||
Sbjct: 50141 ttaatactagtactattctat 50121



to top

>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete
              sequence
          Length = 200458

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 501    ttaatactagtactattctat 521
              |||||||||||||||||||||
Sbjct: 195519 ttaatactagtactattctat 195499



to top

>gb|AY510455.1| Aspergillus flavus isolate AF36 aflatoxin biosynthesis gene cluster,
             complete sequence
          Length = 78264

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccgatttcaccggcagcttg 319
             ||||||||||||||||||||
Sbjct: 21841 ccgatttcaccggcagcttg 21822



to top

>ref|NM_111863.1| Arabidopsis thaliana acyltransferase AT3G10280 mRNA, complete cds
          Length = 1380

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 472 ttattgttagtacggagaaaatga 495
           ||||||||||||||||||| ||||
Sbjct: 635 ttattgttagtacggagaacatga 658



to top

>ref|NM_130237.2| Arabidopsis thaliana HIC (HIGH CARBON DIOXIDE); acyltransferase
            AT2G46720 (HIC) mRNA, complete cds
          Length = 2839

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 472  ttattgttagtacggagaaaatga 495
            ||||||||||||||||||| ||||
Sbjct: 2094 ttattgttagtacggagaacatga 2117



to top

>gb|AY510451.1| Aspergillus flavus isolate AF13 aflatoxin biosynthesis gene cluster,
             complete sequence
          Length = 88318

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccgatttcaccggcagcttg 319
             ||||||||||||||||||||
Sbjct: 30572 ccgatttcaccggcagcttg 30553



to top

>gb|AY510453.1| Aspergillus flavus isolate AF70 aflatoxin biosynthesis gene cluster,
             complete sequence
          Length = 75829

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccgatttcaccggcagcttg 319
             ||||||||||||||||||||
Sbjct: 22172 ccgatttcaccggcagcttg 22153



to top

>gb|AC136091.2| Rattus norvegicus 18 BAC CH230-329A5 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 189650

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   tctatgtaattgcttcctag 536
             ||||||||||||||||||||
Sbjct: 59129 tctatgtaattgcttcctag 59110



to top

>gb|L48183.3|ASNFAS1A Aspergillus parasiticus fatty acid synthetase (fas-1a) gene
          Length = 13217

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  ccgatttcaccggcagcttg 319
            ||||||||||||||||||||
Sbjct: 3412 ccgatttcaccggcagcttg 3393



to top

>gb|AY371490.1| Aspergillus parasiticus aflatoxin pathway gene cluster, complete
             sequence
          Length = 82081

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccgatttcaccggcagcttg 319
             ||||||||||||||||||||
Sbjct: 22577 ccgatttcaccggcagcttg 22558



to top

>gb|AY539897.1| Rattus norvegicus LRRGT00146 mRNA, complete cds
          Length = 1335

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 gaggaactcctgcatgagat 391
           ||||||||||||||||||||
Sbjct: 207 gaggaactcctgcatgagat 188



to top

>gb|AC139360.8| Mus musculus chromosome 3, clone RP23-324F4, complete sequence
          Length = 186836

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   aaggaaaagaaatgcagagg 375
             ||||||||||||||||||||
Sbjct: 94794 aaggaaaagaaatgcagagg 94813



to top

>emb|BX323815.12| Zebrafish DNA sequence from clone DKEY-148J13 in linkage group 14,
             complete sequence
          Length = 73527

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    aattgggattgggccatgga 101
             ||||||||||||||||||||
Sbjct: 34714 aattgggattgggccatgga 34695



to top

>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   agaaggaaaagaaatgcaga 373
             ||||||||||||||||||||
Sbjct: 61833 agaaggaaaagaaatgcaga 61814



to top

>gb|AC131769.3| Mus musculus BAC clone RP24-290G2 from chromosome 3, complete sequence
          Length = 148675

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   aaaagaaggaaaagaaatgcagag 374
             |||||||||||| |||||||||||
Sbjct: 47787 aaaagaaggaaatgaaatgcagag 47810



to top

>gb|AC114000.5| Mus musculus BAC clone RP23-161K1 from chromosome 14, complete sequence
          Length = 212322

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 536    gaaatcacgggaagtgccaactgt 559
              |||||||||| |||||||||||||
Sbjct: 105049 gaaatcacggaaagtgccaactgt 105072



to top

>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
             complete sequence
          Length = 87937

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 472   ttattgttagtacggagaaaatga 495
             ||||||||||||||||||| ||||
Sbjct: 49923 ttattgttagtacggagaacatga 49900



to top

>gb|AC126460.4| Mus musculus BAC clone RP23-187E3 from 3, complete sequence
          Length = 192918

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    aaggaaaagaaatgcagagg 375
              ||||||||||||||||||||
Sbjct: 105391 aaggaaaagaaatgcagagg 105410



to top

>gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 map 3, complete sequence
          Length = 224451

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    aaaagaaggaaaagaaatgcagag 374
              |||||||||||| |||||||||||
Sbjct: 221957 aaaagaaggaaatgaaatgcagag 221980



to top

>emb|AL357354.10| Human DNA sequence from clone RP11-465C5 on chromosome Xq21.2-22.1
              Contains a phosphoribosylaminoimidazole carboxylase,
              phosphoribosylaminoimidazole succinocarboxamide synthetase
              (PAICS) pseudogene, complete sequence
          Length = 194612

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 443    tatacctcctcccttttgga 462
              ||||||||||||||||||||
Sbjct: 143275 tatacctcctcccttttgga 143256



to top

>emb|AL162412.11| Human DNA sequence from clone RP11-109D9 on chromosome 9 Contains the 5'
              end of the APBA1 gene for myloid beta (A4) precursor
              protein-binding, family A, member 1 (X11), two novel genes,
              the 5' end of a novel gene possible ortholog of mouse RIKEN
              cDNA 1700028P14 gene and two CpG islands, complete sequence
          Length = 189277

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    tccacaccaaaagaaggaaa 362
              ||||||||||||||||||||
Sbjct: 103467 tccacaccaaaagaaggaaa 103448



to top

>emb|AL022725.8|HS430A16 Human DNA sequence from clone RP3-430A16 on chromosome 6p24.1-25.3
             Contains part of the CDYL gene for Y chromosome-like
             chromodomain protein and a CpG island, complete sequence
          Length = 129756

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tattctatgtaattgcttcc 533
             ||||||||||||||||||||
Sbjct: 47626 tattctatgtaattgcttcc 47607



to top

>gb|AC142454.4| Mus musculus BAC clone RP23-313G1 from chromosome 3, complete sequence
          Length = 183223

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   aaggaaaagaaatgcagagg 375
             ||||||||||||||||||||
Sbjct: 94792 aaggaaaagaaatgcagagg 94811



to top

>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project)
          Length = 89988

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 80   gtaattgggattgggccatggaaggatacaat 111
            |||||||||||||| |||||||| || |||||
Sbjct: 2199 gtaattgggattggtccatggaaagacacaat 2168



to top

>emb|AL133421.1|ATF13G24 Arabidopsis thaliana DNA chromosome 5, BAC clone F13G24 (ESSA project)
          Length = 88095

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 80    gtaattgggattgggccatggaaggatacaat 111
             |||||||||||||| |||||||| || |||||
Sbjct: 82441 gtaattgggattggtccatggaaagacacaat 82410



to top

>emb|BX323793.10| Zebrafish DNA sequence from clone DKEY-185P18 in linkage group 16,
             complete sequence
          Length = 170199

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 200   ttcagaaatgagaacaaattcttgcatttcaa 231
             ||||||||| |||| || ||||||||||||||
Sbjct: 74519 ttcagaaataagaataagttcttgcatttcaa 74550



to top

>dbj|AB196490.1| Aspergillus oryzae DNA, aflatoxin biosynthesis gene cluster, complete
             sequence, strain: RIB40
          Length = 89641

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccgatttcaccggcagcttg 319
             ||||||||||||||||||||
Sbjct: 31906 ccgatttcaccggcagcttg 31887



to top

>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccgatttcaccggcagcttg 319
             ||||||||||||||||||||
Sbjct: 38401 ccgatttcaccggcagcttg 38382



to top

>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete
             sequence
          Length = 55870

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 472   ttattgttagtacggagaaaatga 495
             ||||||||||||||||||| ||||
Sbjct: 54039 ttattgttagtacggagaacatga 54062



to top

>gb|AF391094.1| Aspergillus parasiticus fatty acid synthase alpha subunit and fatty
            acid synthase beta subunit genes, complete cds
          Length = 13144

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  ccgatttcaccggcagcttg 319
            ||||||||||||||||||||
Sbjct: 3412 ccgatttcaccggcagcttg 3393



to top

>gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, complete sequence
          Length = 139226

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   tatacctcctcccttttgga 462
             ||||||||||||||||||||
Sbjct: 84035 tatacctcctcccttttgga 84054



to top

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    gcgctgttcaccgatttcac 309
              ||||||||||||||||||||
Sbjct: 270306 gcgctgttcaccgatttcac 270325



to top

>gb|AC084272.41| Mus musculus strain C57BL/6J clone rp23-11g21 map 3, complete sequence
          Length = 206230

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 351   aaaagaaggaaaagaaatgcagag 374
             |||||||||||| |||||||||||
Sbjct: 62797 aaaagaaggaaatgaaatgcagag 62820



to top

>emb|BX830013.1|CNS0A1JL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB53ZA12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1225

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 80  gtaattgggattgggccatggaaggatacaat 111
           |||||||||||||| |||||||| || |||||
Sbjct: 847 gtaattgggattggtccatggaaagacacaat 878



to top

>gb|AF188486.1|AF188486 Arabidopsis thaliana putative 3-keto-acyl-CoA synthase (HIC) gene,
           partial sequence
          Length = 1584

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 472 ttattgttagtacggagaaaatga 495
           ||||||||||||||||||| ||||
Sbjct: 661 ttattgttagtacggagaacatga 684



to top

>gb|AF188485.1|AF188485 Arabidopsis thaliana putative 3-keto-acyl-CoA synthase (HIC) gene,
            complete cds
          Length = 5600

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 472  ttattgttagtacggagaaaatga 495
            ||||||||||||||||||| ||||
Sbjct: 2228 ttattgttagtacggagaacatga 2251



to top

>gb|AC009362.8|AC009362 Homo sapiens chromosome 7 clone RP11-256C6, complete sequence
          Length = 160156

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 443    tatacctcctcccttttgga 462
              ||||||||||||||||||||
Sbjct: 106663 tatacctcctcccttttgga 106682



to top

>ref|XM_576237.1| PREDICTED: Rattus norvegicus similar to LRRGT00146 (LOC500846),
           mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 372 gaggaactcctgcatgagat 391
           ||||||||||||||||||||
Sbjct: 207 gaggaactcctgcatgagat 188



to top

>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11,
              complete sequence
          Length = 158170

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     aattgggattgggccatgga 101
              ||||||||||||||||||||
Sbjct: 142183 aattgggattgggccatgga 142164



to top

>gb|AC154235.2| Mus musculus BAC clone RP24-347C11 from 17, complete sequence
          Length = 214934

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 351  aaaagaaggaaaagaaatgcagag 374
            ||||||||||||||||||| ||||
Sbjct: 7300 aaaagaaggaaaagaaatgaagag 7277



to top

>emb|CT573084.4| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete
              sequence
          Length = 221319

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    aaaagaaggaaaagaaatgcagag 374
              ||||||||||||||||||| ||||
Sbjct: 130593 aaaagaaggaaaagaaatgaagag 130616



to top

>dbj|AB061271.2| Zea mays ZmNAS2 mRNA, complete cds
          Length = 1806

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 gtcgacgcgctgttcaccga 303
           ||||||||||||||||||||
Sbjct: 934 gtcgacgcgctgttcaccga 953



to top

>gb|U64985.1|APU64985 Anas platyrhynchos serum amyloid A gene, complete cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 aaggaaaagaaatgcagagg 375
           ||||||||||||||||||||
Sbjct: 347 aaggaaaagaaatgcagagg 328



to top

>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence
          Length = 160295

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    agaaggaaaagaaatgcaga 373
              ||||||||||||||||||||
Sbjct: 114535 agaaggaaaagaaatgcaga 114516



to top

>emb|AL713897.7| Mouse DNA sequence from clone RP23-373J8 on chromosome X, complete
              sequence
          Length = 166240

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 351    aaaagaaggaaaagaaatgcagag 374
              ||||||| ||||||||||||||||
Sbjct: 142339 aaaagaaagaaaagaaatgcagag 142362



to top

>emb|AL645723.11| Mouse DNA sequence from clone RP23-423N6 on chromosome 4, complete
             sequence
          Length = 220638

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   accaaaagaaggaaaagaaa 367
             ||||||||||||||||||||
Sbjct: 67512 accaaaagaaggaaaagaaa 67531



to top

>gb|K03152.1|PHVLBA Phaseolus vulgaris (kidney bean) leghemoglobin gene, complete cds
          Length = 933

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 agaaatgagaacaaattctt 222
           ||||||||||||||||||||
Sbjct: 344 agaaatgagaacaaattctt 325



to top

>dbj|AB004549.1| Phaseolus vulgaris DNA for leghemoglobin, complete cds
          Length = 717

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 agaaatgagaacaaattctt 222
           ||||||||||||||||||||
Sbjct: 230 agaaatgagaacaaattctt 211


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,040,996
Number of Sequences: 3902068
Number of extensions: 5040996
Number of successful extensions: 110417
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110152
Number of HSP's gapped (non-prelim): 265
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top