ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62p04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190784.1| Oryza sativa (japonica cultivar-group), predic... 264 2e-67
2dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
3dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
4dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
5gb|AY104328.1| Zea mays PCO078649 mRNA sequence 258 2e-65
6gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, m... 242 9e-61
7ref|XM_474468.1| Oryza sativa (japonica cultivar-group), predic... 157 4e-35
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
9dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA... 157 4e-35
10emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 157 4e-35
11dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
12emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 149 1e-32
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
14dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
15dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
17dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
18dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
19gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 44 0.42
20gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 44 0.42
21emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4,... 44 0.42
22emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4,... 44 0.42
23emb|X84225.1|NTPHIIPRC N.tabacum mRNA for precursor of photosyst... 44 0.42
24dbj|AK103012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
25dbj|AK059412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
26gb|DQ340567.1| Nicotiana benthamiana chloroplast photosystem II ... 44 0.42
27gb|DQ340566.1| Nicotiana benthamiana chloroplast photosystem II ... 44 0.42
28emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chro... 42 1.7
29emb|AL032822.1|HS59B16 Human DNA sequence from clone RP1-59B16 o... 42 1.7
30gb|BT009375.1| Triticum aestivum clone wlm96.pk029.n15:fis, full... 42 1.7
31emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1 42 1.7
32dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.7
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
34dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA,... 42 1.7
36dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:R... 42 1.7
37gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome... 42 1.7
38gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genom... 40 6.6
39gb|BC101974.1| Homo sapiens heart and neural crest derivatives e... 40 6.6
40gb|BC101406.1| Homo sapiens heart and neural crest derivatives e... 40 6.6
41gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome... 40 6.6
42gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, co... 40 6.6
43gb|DQ214252.1| Taeniopygia guttata clone 0058P0055B08 RIKEN cDNA... 40 6.6
44gb|DQ214251.1| Taeniopygia guttata clone 0061P0025G02 RIKEN cDNA... 40 6.6
45ref|XM_463959.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
46ref|XM_506700.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.6
47gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.6
48ref|XM_471717.1| Oryza sativa (japonica cultivar-group), predic... 40 6.6
49gb|AY022931.1| Oryza sativa microsatellite MRG5256 containing (C... 40 6.6
50gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosom... 40 6.6
51ref|XM_323144.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
52ref|XM_955498.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.6
53ref|NM_028188.1| Mus musculus RUN and SH3 domain containing 1 (R... 40 6.6
54gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome... 40 6.6
55gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
56gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome... 40 6.6
57gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 40 6.6
58gb|BC056360.1| Mus musculus RUN and SH3 domain containing 1, mRN... 40 6.6
59gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome... 40 6.6
60gb|BC109383.1| Homo sapiens heart and neural crest derivatives e... 40 6.6
61gb|BC052081.1| Mus musculus RUN and SH3 domain containing 1, mRN... 40 6.6
62ref|XM_504443.1| Yarrowia lipolytica CLIB122, YALI0E26895g predi... 40 6.6
63gb|AY321335.1| Rattus norvegicus Ac2-125 mRNA, complete cds 40 6.6
64gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswel... 40 6.6
65emb|Z11845.1|SAEVESKIP S.americana mRNA encoding even-skipped 40 6.6
66emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.6
67emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 6.6
68emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 6.6
69emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 6.6
70emb|CR857412.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0317 (from cl... 40 6.6
71gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswel... 40 6.6
72ref|NM_021973.2| Homo sapiens heart and neural crest derivatives... 40 6.6
73gb|AC107462.5| Homo sapiens BAC clone RP11-338B9 from 4, complet... 40 6.6
74dbj|AK122739.1| Homo sapiens cDNA FLJ16260 fis, clone IMR3220069... 40 6.6
75gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 6.6
76ref|NM_140996.2| Drosophila melanogaster CG4289-RA (CG4289), mRNA 40 6.6
77gb|AY089608.1| Drosophila melanogaster RE22286 full insert cDNA 40 6.6
78gb|AC096576.3| Homo sapiens BAC clone RP11-556G22 from 4, comple... 40 6.6
79gb|AC093849.2| Homo sapiens BAC clone RP11-489G11 from 4, comple... 40 6.6
80dbj|AK155528.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.6
81dbj|AK170012.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.6
82dbj|AK170009.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.6
83dbj|AK170210.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 6.6
84gb|S49864.1| psbS=photosystem II 22 kda polypeptide [spinach, mR... 40 6.6
85dbj|AK042689.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.6
86dbj|AK032334.1| Mus musculus adult male olfactory brain cDNA, RI... 40 6.6
87dbj|AK039664.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 40 6.6
88gb|AC175825.2| Pan troglodytes BAC clone CH251-171E12 from chrom... 40 6.6
89dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
90dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
91ref|NM_174474.1| Bos taurus troponin T1, skeletal, slow (TNNT1),... 40 6.6
92dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.6
93ref|XM_574978.1| PREDICTED: Rattus norvegicus similar to Ac2-125... 40 6.6
94dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
95gb|AC161282.5| Pan troglodytes BAC clone CH251-381O9 from chromo... 40 6.6
96dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
97dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.6
98dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
99dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
100dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
101emb|X68552.1|SOPSII S.oleracea mRNA for photosystem II 22kDa pro... 40 6.6
102dbj|AK111276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
103dbj|AK106752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
104dbj|AK101502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
105dbj|AK073555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
106emb|Z63094.1|HS78C5F H.sapiens CpG island DNA genomic Mse1 fragm... 40 6.6
107dbj|AK072625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
108dbj|AK071006.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
109gb|BC057034.1| Mus musculus RUN and SH3 domain containing 1, mRN... 40 6.6
110gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73... 40 6.6
111emb|AL138479.4|CNS01DWS Human chromosome 14 DNA sequence BAC R-2... 40 6.6
112dbj|AB085601.1| Bos taurus Tnnt1 mRNA for troponin T slow skelet... 40 6.6
113dbj|AB085600.1| Bos taurus Tnnt1 mRNA for troponin T slow skelet... 40 6.6
114gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.6
115gb|DQ176000.1| Xenopus laevis RPGR ORF15 isoform mRNA, partial cds 40 6.6
116gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 6.6
117emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4,... 40 6.6
118dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 6.6
119emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.6
120emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 40 6.6 
>ref|NM_190784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 807

 Score =  264 bits (133), Expect = 2e-67
 Identities = 189/208 (90%)
 Strand = Plus / Plus

                                                                       
Query: 283 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 219 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 278

                                                                       
Query: 343 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 402
           ||| |||||||| ||||| |||||| | || || |||||||||||| |||| ||||||||
Sbjct: 279 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 338

                                                                       
Query: 403 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 462
           |||||| ||||| |||||| | ||||||||||| ||||| || |||||||||||||||||
Sbjct: 339 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 398

                                       
Query: 463 ggagcccctcctnctcttcttcatcctc 490
           |||||||||||| |||||||||||||||
Sbjct: 399 ggagcccctcctcctcttcttcatcctc 426



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 219 tggccctgttcggcaagtccaagaccaaggccgcgcc 255
           |||| |||||||||| |||||||||||||||||||||
Sbjct: 152 tggcgctgttcggcaggtccaagaccaaggccgcgcc 188



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 321 tcggtttcaccaaggagaacgagctcttcgtcggccg 357
           |||| ||||||||||  |||||||| |||||||||||
Sbjct: 572 tcggcttcaccaaggccaacgagctgttcgtcggccg 608
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>dbj|AK104275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B11, full
           insert sequence
          Length = 1055

 Score =  264 bits (133), Expect = 2e-67
 Identities = 189/208 (90%)
 Strand = Plus / Plus

                                                                       
Query: 283 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 304 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 363

                                                                       
Query: 343 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 402
           ||| |||||||| ||||| |||||| | || || |||||||||||| |||| ||||||||
Sbjct: 364 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 423

                                                                       
Query: 403 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 462
           |||||| ||||| |||||| | ||||||||||| ||||| || |||||||||||||||||
Sbjct: 424 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 483

                                       
Query: 463 ggagcccctcctnctcttcttcatcctc 490
           |||||||||||| |||||||||||||||
Sbjct: 484 ggagcccctcctcctcttcttcatcctc 511



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 219 tggccctgttcggcaagtccaagaccaaggccgcgcc 255
           |||| |||||||||| |||||||||||||||||||||
Sbjct: 237 tggcgctgttcggcaggtccaagaccaaggccgcgcc 273



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 321 tcggtttcaccaaggagaacgagctcttcgtcggccg 357
           |||| ||||||||||  |||||||| |||||||||||
Sbjct: 657 tcggcttcaccaaggccaacgagctgttcgtcggccg 693
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>dbj|AK071827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118A05, full
           insert sequence
          Length = 1057

 Score =  264 bits (133), Expect = 2e-67
 Identities = 189/208 (90%)
 Strand = Plus / Plus

                                                                       
Query: 283 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 307 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 366

                                                                       
Query: 343 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 402
           ||| |||||||| ||||| |||||| | || || |||||||||||| |||| ||||||||
Sbjct: 367 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 426

                                                                       
Query: 403 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 462
           |||||| ||||| |||||| | ||||||||||| ||||| || |||||||||||||||||
Sbjct: 427 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 486

                                       
Query: 463 ggagcccctcctnctcttcttcatcctc 490
           |||||||||||| |||||||||||||||
Sbjct: 487 ggagcccctcctcctcttcttcatcctc 514



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 219 tggccctgttcggcaagtccaagaccaaggccgcgcc 255
           |||| |||||||||| |||||||||||||||||||||
Sbjct: 240 tggcgctgttcggcaggtccaagaccaaggccgcgcc 276



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 321 tcggtttcaccaaggagaacgagctcttcgtcggccg 357
           |||| ||||||||||  |||||||| |||||||||||
Sbjct: 660 tcggcttcaccaaggccaacgagctgttcgtcggccg 696
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>dbj|AK058284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D09, full
           insert sequence
          Length = 1064

 Score =  264 bits (133), Expect = 2e-67
 Identities = 189/208 (90%)
 Strand = Plus / Plus

                                                                       
Query: 283 caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
           |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 304 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 363

                                                                       
Query: 343 gctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccat 402
           ||| |||||||| ||||| |||||| | || || |||||||||||| |||| ||||||||
Sbjct: 364 gctgttcgtcgggcgtgtcgccatgctcgggtttgccgcgtcgatcctgggtgaggccat 423

                                                                       
Query: 403 caccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggc 462
           |||||| ||||| |||||| | ||||||||||| ||||| || |||||||||||||||||
Sbjct: 424 caccgggaagggaatcctggcgcagctgaacctggagacggggatcccgatctacgaggc 483

                                       
Query: 463 ggagcccctcctnctcttcttcatcctc 490
           |||||||||||| |||||||||||||||
Sbjct: 484 ggagcccctcctcctcttcttcatcctc 511



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 219 tggccctgttcggcaagtccaagaccaaggccgcgcc 255
           |||| |||||||||| |||||||||||||||||||||
Sbjct: 237 tggcgctgttcggcaggtccaagaccaaggccgcgcc 273



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 321 tcggtttcaccaaggagaacgagctcttcgtcggccg 357
           |||| ||||||||||  |||||||| |||||||||||
Sbjct: 657 tcggcttcaccaaggccaacgagctgttcgtcggccg 693
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>gb|AY104328.1| Zea mays PCO078649 mRNA sequence
          Length = 1252

 Score =  258 bits (130), Expect = 2e-65
 Identities = 239/276 (86%), Gaps = 6/276 (2%)
 Strand = Plus / Plus

                                                                       
Query: 221 gccctgttcggcaagtccaagaccaaggccgcgccggccaagaaggtcgttgcgcccaag 280
           |||||||||||||| ||||||  |||| |||||||||| |||||||  | ||||||||||
Sbjct: 346 gccctgttcggcaaatccaaggtcaagaccgcgccggcgaagaaggctgctgcgcccaag 405

                                                                       
Query: 281 cccaagacg------gaggacggcatcttcggcacgtccggcgggatcggtttcaccaag 334
           |||||| ||      ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 406 cccaagccgaaggttgaggatggtatcttcggcacgtccggcgggatcggtttcaccaag 465

                                                                       
Query: 335 gagaacgagctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttggga 394
           ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||| |  | |||
Sbjct: 466 gagaacgagctgttcgtcggccgcgttgccatgcttggctttgccgcatcgctacttgga 525

                                                                       
Query: 395 gaggccatcaccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatc 454
           |||||||| ||||| ||||| |||||  ||||||||||||| ||||| |||||||| |||
Sbjct: 526 gaggccattaccgggaagggcatccttgcccagctgaacctcgagacgggcatccccatc 585

                                               
Query: 455 tacgaggcggagcccctcctnctcttcttcatcctc 490
           |||||||||||||| ||||| || ||||||||||||
Sbjct: 586 tacgaggcggagcctctcctcctgttcttcatcctc 621
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>gb|AY291061.1| Zea mays photosystem II subunit PsbS precursor, mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 1024

 Score =  242 bits (122), Expect = 9e-61
 Identities = 237/276 (85%), Gaps = 6/276 (2%)
 Strand = Plus / Plus

                                                                       
Query: 221 gccctgttcggcaagtccaagaccaaggccgcgccggccaagaaggtcgttgcgcccaag 280
           |||||||||||||| ||||||  |||| |||||||||| |||||||  | ||||||||||
Sbjct: 156 gccctgttcggcaaatccaaggtcaagaccgcgccggcgaagaaggctgctgcgcccaag 215

                                                                       
Query: 281 cccaagacg------gaggacggcatcttcggcacgtccggcgggatcggtttcaccaag 334
           |||||| ||      ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 216 cccaagccgaaggttgaggatggtatcttcggcacgtccggcgggatcggtttcaccaag 275

                                                                       
Query: 335 gagaacgagctcttcgtcggccgtgttgccatgattggcttcgccgcgtcgatcttggga 394
           ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||| |  | |||
Sbjct: 276 gagaacgagctgttcgtcggccgcgttgccatgcttggctttgccgcatcgctacttgga 335

                                                                       
Query: 395 gaggccatcaccggcaagggtatcctgtcccagctgaaccttgagaccggcatcccgatc 454
           |||||||| ||||| ||||| |||||  | ||||||||||| ||||| |||||||| |||
Sbjct: 336 gaggccattaccgggaagggcatccttgcgcagctgaacctggagacgggcatccccatc 395

                                               
Query: 455 tacgaggcggagcccctcctnctcttcttcatcctc 490
           ||||| ||||| |||||||| || ||||||||||||
Sbjct: 396 tacgaagcggaacccctcctcctgttcttcatcctc 431
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>ref|XM_474468.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 747

 Score =  157 bits (79), Expect = 4e-35
 Identities = 171/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 289 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 348
           ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 168 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 227

                                                                       
Query: 349 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 408
           ||| ||  | || |||||| | || ||||| |||||  || | || |||||  |||||||
Sbjct: 228 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 287

                                                                       
Query: 409 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 468
           |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 288 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 347

                                 
Query: 469 cctcctnctcttcttcatcctc 490
            || || |||||||||||||||
Sbjct: 348 gctgctcctcttcttcatcctc 369



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 321 tcggtttcaccaaggagaacgagctcttcgt 351
           |||| |||||||||| |||||||||||||||
Sbjct: 509 tcgggttcaccaaggcgaacgagctcttcgt 539
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  157 bits (79), Expect = 4e-35
 Identities = 171/202 (84%)
 Strand = Plus / Plus

                                                                            
Query: 289      ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 348
                ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 35372522 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 35372581

                                                                            
Query: 349      cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 408
                ||| ||  | || |||||| | || ||||| |||||  || | || |||||  |||||||
Sbjct: 35372582 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 35372641

                                                                            
Query: 409      caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 468
                |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 35372642 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 35372701

                                      
Query: 469      cctcctnctcttcttcatcctc 490
                 || || |||||||||||||||
Sbjct: 35372702 gctgctcctcttcttcatcctc 35372723



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 321      tcggtttcaccaaggagaacgagctcttcgt 351
                |||| |||||||||| |||||||||||||||
Sbjct: 35372863 tcgggttcaccaaggcgaacgagctcttcgt 35372893



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 154      gctcgcgctctcctcctcctcg 175
                ||||||||||||||||||||||
Sbjct: 26671091 gctcgcgctctcctcctcctcg 26671112



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 155      ctcgcgctctcctcctcctc 174
                ||||||||||||||||||||
Sbjct: 13677175 ctcgcgctctcctcctcctc 13677194
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>dbj|D84392.1| Oryza sativa (japonica cultivar-group) PSII-S mRNA for 22 kDa
           protein of photosystem II precursor, complete cds
          Length = 1108

 Score =  157 bits (79), Expect = 4e-35
 Identities = 171/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 289 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 348
           ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 316 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 375

                                                                       
Query: 349 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 408
           ||| ||  | || |||||| | || ||||| |||||  || | || |||||  |||||||
Sbjct: 376 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 435

                                                                       
Query: 409 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 468
           |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 436 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 495

                                 
Query: 469 cctcctnctcttcttcatcctc 490
            || || |||||||||||||||
Sbjct: 496 gctgctcctcttcttcatcctc 517



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 321 tcggtttcaccaaggagaacgagctcttcgt 351
           |||| |||||||||| |||||||||||||||
Sbjct: 657 tcgggttcaccaaggcgaacgagctcttcgt 687
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
              complete sequence
          Length = 173770

 Score =  157 bits (79), Expect = 4e-35
 Identities = 171/202 (84%)
 Strand = Plus / Plus

                                                                          
Query: 289    ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 348
              ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 168366 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 168425

                                                                          
Query: 349    cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 408
              ||| ||  | || |||||| | || ||||| |||||  || | || |||||  |||||||
Sbjct: 168426 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 168485

                                                                          
Query: 409    caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 468
              |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 168486 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 168545

                                    
Query: 469    cctcctnctcttcttcatcctc 490
               || || |||||||||||||||
Sbjct: 168546 gctgctcctcttcttcatcctc 168567



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 321    tcggtttcaccaaggagaacgagctcttcgt 351
              |||| |||||||||| |||||||||||||||
Sbjct: 168707 tcgggttcaccaaggcgaacgagctcttcgt 168737
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>dbj|AK071638.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101I15, full
           insert sequence
          Length = 1116

 Score =  149 bits (75), Expect = 1e-32
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 289 ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 348
           ||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| ||
Sbjct: 332 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgagctgtt 391

                                                                       
Query: 349 cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 408
           ||| ||  | || |||||| | || ||||| |||||  || |  | |||||  |||||||
Sbjct: 392 cgtggggagggtggccatgctggggttcgcggcgtccctcctcagcgaggcggtcaccgg 451

                                                                       
Query: 409 caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 468
           |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 452 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 511

                                 
Query: 469 cctcctnctcttcttcatcctc 490
            || || |||||||||||||||
Sbjct: 512 gctgctcctcttcttcatcctc 533



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 321 tcggtttcaccaaggagaacgagctcttcgt 351
           |||| |||||||||| |||||||||||||||
Sbjct: 673 tcgggttcaccaaggcgaacgagctcttcgt 703
to top
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete
            sequence
          Length = 32686

 Score =  149 bits (75), Expect = 1e-32
 Identities = 170/202 (84%)
 Strand = Plus / Plus

                                                                        
Query: 289  ggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacgagctctt 348
            ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| || ||
Sbjct: 4352 ggaggacggcatcttcggcacctccggcggcatcgggttcaccaaggagaacgaactgtt 4411

                                                                        
Query: 349  cgtcggccgtgttgccatgattggcttcgccgcgtcgatcttgggagaggccatcaccgg 408
            ||| ||  | || |||||| | || ||||| |||||  || | || |||||  |||||||
Sbjct: 4412 cgtggggagggtggccatgctggggttcgcggcgtccctcctcggcgaggcggtcaccgg 4471

                                                                        
Query: 409  caagggtatcctgtcccagctgaaccttgagaccggcatcccgatctacgaggcggagcc 468
            |||||| |||||| | ||||| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct: 4472 caagggcatcctggcgcagctcaacctggagacgggcatccccatctacgaggccgagcc 4531

                                  
Query: 469  cctcctnctcttcttcatcctc 490
             || || |||||||||||||||
Sbjct: 4532 gctgctcctcttcttcatcctc 4553



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 321  tcggtttcaccaaggagaacgagctcttcgt 351
            |||| |||||||||| |||||||||||||||
Sbjct: 4693 tcgggttcaccaaggcgaacgagctcttcgt 4723
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  143 bits (72), Expect = 6e-31
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 380      gcgtcgatcttgggagaggccatcaccggcaagggtatcctgtcccagctgaaccttgag 439
                ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| |||
Sbjct: 37692178 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 37692237

                                                                   
Query: 440      accggcatcccgatctacgaggcggagcccctcctnctcttcttcatcctc 490
                || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 37692238 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctc 37692288



 Score =  129 bits (65), Expect = 9e-27
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                            
Query: 283      caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
                |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 37690702 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 37690761

                                         
Query: 343      gctcttcgtcggccgtgttgccatg 367
                ||| |||||||| ||||| ||||||
Sbjct: 37690762 gctgttcgtcgggcgtgtcgccatg 37690786



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                     
Query: 219      tggccctgttcggcaagtccaagaccaaggccgcgcc 255
                |||| |||||||||| |||||||||||||||||||||
Sbjct: 37690519 tggcgctgttcggcaggtccaagaccaaggccgcgcc 37690555



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 321      tcggtttcaccaaggagaacgagctcttcgtcggccg 357
                |||| ||||||||||  |||||||| |||||||||||
Sbjct: 37692434 tcggcttcaccaaggccaacgagctgttcgtcggccg 37692470



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 154      gctcgcgctctcctcctcctcggc 177
                ||||||| ||||||||||||||||
Sbjct: 29416860 gctcgcggtctcctcctcctcggc 29416883
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0677H08
          Length = 178830

 Score =  143 bits (72), Expect = 6e-31
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                          
Query: 380    gcgtcgatcttgggagaggccatcaccggcaagggtatcctgtcccagctgaaccttgag 439
              ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| |||
Sbjct: 152652 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 152711

                                                                 
Query: 440    accggcatcccgatctacgaggcggagcccctcctnctcttcttcatcctc 490
              || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 152712 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctc 152762



 Score =  129 bits (65), Expect = 9e-27
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                          
Query: 283    caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
              |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 151176 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 151235

                                       
Query: 343    gctcttcgtcggccgtgttgccatg 367
              ||| |||||||| ||||| ||||||
Sbjct: 151236 gctgttcgtcgggcgtgtcgccatg 151260



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                   
Query: 219    tggccctgttcggcaagtccaagaccaaggccgcgcc 255
              |||| |||||||||| |||||||||||||||||||||
Sbjct: 150993 tggcgctgttcggcaggtccaagaccaaggccgcgcc 151029



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 321    tcggtttcaccaaggagaacgagctcttcgtcggccg 357
              |||| ||||||||||  |||||||| |||||||||||
Sbjct: 152908 tcggcttcaccaaggccaacgagctgttcgtcggccg 152944
to top
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039A07
          Length = 148892

 Score =  143 bits (72), Expect = 6e-31
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                         
Query: 380   gcgtcgatcttgggagaggccatcaccggcaagggtatcctgtcccagctgaaccttgag 439
             ||||||||| |||| |||||||||||||| ||||| |||||| | ||||||||||| |||
Sbjct: 20479 gcgtcgatcctgggtgaggccatcaccgggaagggaatcctggcgcagctgaacctggag 20538

                                                                
Query: 440   accggcatcccgatctacgaggcggagcccctcctnctcttcttcatcctc 490
             || || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 20539 acggggatcccgatctacgaggcggagcccctcctcctcttcttcatcctc 20589



 Score =  129 bits (65), Expect = 9e-27
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                         
Query: 283   caagacggaggacggcatcttcggcacgtccggcgggatcggtttcaccaaggagaacga 342
             |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 19003 caagaccgaggacggcatcttcggcacgtccggtgggatcggtttcaccaaggagaacga 19062

                                      
Query: 343   gctcttcgtcggccgtgttgccatg 367
             ||| |||||||| ||||| ||||||
Sbjct: 19063 gctgttcgtcgggcgtgtcgccatg 19087



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                  
Query: 219   tggccctgttcggcaagtccaagaccaaggccgcgcc 255
             |||| |||||||||| |||||||||||||||||||||
Sbjct: 18820 tggcgctgttcggcaggtccaagaccaaggccgcgcc 18856



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 321   tcggtttcaccaaggagaacgagctcttcgtcggccg 357
             |||| ||||||||||  |||||||| |||||||||||
Sbjct: 20735 tcggcttcaccaaggccaacgagctgttcgtcggccg 20771
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                            
Query: 446     atcccgatctacgaggcggagcccctcctnctcttcttcatcctc 490
               |||||||||||||||| ||||||||||||  ||||||||||||||
Sbjct: 7553031 atcccgatctacgaggtggagcccctcctcatcttcttcatcctc 7552987
to top
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0061L20
          Length = 138926

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 446    atcccgatctacgaggcggagcccctcctnctcttcttcatcctc 490
              |||||||||||||||| ||||||||||||  ||||||||||||||
Sbjct: 131345 atcccgatctacgaggtggagcccctcctcatcttcttcatcctc 131301
to top
>dbj|AP004303.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0407H12
          Length = 167754

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                          
Query: 446   atcccgatctacgaggcggagcccctcctnctcttcttcatcctc 490
             |||||||||||||||| ||||||||||||  ||||||||||||||
Sbjct: 58441 atcccgatctacgaggtggagcccctcctcatcttcttcatcctc 58397
to top
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 245    aaggccgcgccggccaagaagg 266
              ||||||||||||||||||||||
Sbjct: 119343 aaggccgcgccggccaagaagg 119322
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 245    aaggccgcgccggccaagaagg 266
              ||||||||||||||||||||||
Sbjct: 692115 aaggccgcgccggccaagaagg 692136
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>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11,
              complete sequence
          Length = 113677

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 154    gctcgcgctctcctcctcctcg 175
              ||||||||||||||||||||||
Sbjct: 112104 gctcgcgctctcctcctcctcg 112083
to top
>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24,
              complete sequence
          Length = 121056

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 154    gctcgcgctctcctcctcctcg 175
              ||||||||||||||||||||||
Sbjct: 110653 gctcgcgctctcctcctcctcg 110674
to top
>emb|X84225.1|NTPHIIPRC N.tabacum mRNA for precursor of photosysten II 22 kDa protein
          Length = 1081

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 323 ggtttcaccaaggagaacgagctcttcgtcggccgtgttgccatgattgg 372
           |||||||| ||| | || |||||||| || ||||||||||| ||||||||
Sbjct: 340 ggtttcactaagcaaaatgagctctttgttggccgtgttgctatgattgg 389
to top
>dbj|AK103012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116K10, full
           insert sequence
          Length = 2199

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 154 gctcgcgctctcctcctcctcg 175
           ||||||||||||||||||||||
Sbjct: 553 gctcgcgctctcctcctcctcg 574
to top
>dbj|AK059412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C11, full
           insert sequence
          Length = 1370

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 154 gctcgcgctctcctcctcctcg 175
           ||||||||||||||||||||||
Sbjct: 392 gctcgcgctctcctcctcctcg 413
to top
>gb|DQ340567.1| Nicotiana benthamiana chloroplast photosystem II 22 kDa component
           (psbS1) gene, complete cds; nuclear gene for chloroplast
           product
          Length = 3207

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 323 ggtttcaccaaggagaacgagctcttcgtcggccgtgttgccatgattgg 372
           |||||||| ||| | || |||||||| || ||||||||||| ||||||||
Sbjct: 416 ggtttcactaagcaaaatgagctctttgttggccgtgttgctatgattgg 465
to top
>gb|DQ340566.1| Nicotiana benthamiana chloroplast photosystem II 22 kDa component
           (psbS2) gene, complete cds; nuclear gene for chloroplast
           product
          Length = 3212

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 323 ggtttcaccaaggagaacgagctcttcgtcggccgtgttgccatgattgg 372
           |||||||| ||| | || |||||||| || ||||||||||| ||||||||
Sbjct: 396 ggtttcactaagcaaaatgagctctttgttggccgtgttgctatgattgg 445
to top
>emb|CT009717.9| Mouse DNA sequence from clone RP23-216H9 on chromosome 13, complete
             sequence
          Length = 220233

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 467   cccctcctnctcttcttcatcctc 490
             |||||||| |||||||||||||||
Sbjct: 24503 cccctcctcctcttcttcatcctc 24526
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>emb|AL032822.1|HS59B16 Human DNA sequence from clone RP1-59B16 on chromosome 6p22.1-22.3
             Contains an exonuclease FLJ12671 pseudogene, complete
             sequence
          Length = 99902

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 416   atcctgtcccagctgaaccttgaga 440
             |||||||||||| ||||||||||||
Sbjct: 55761 atcctgtcccagttgaaccttgaga 55737
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>gb|BT009375.1| Triticum aestivum clone wlm96.pk029.n15:fis, full insert mRNA
           sequence
          Length = 1031

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 116 gcggccaggccgtcgtcggcgtcca 140
           ||||||| |||||||||||||||||
Sbjct: 236 gcggccacgccgtcgtcggcgtcca 212
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>emb|X59872.2|TAHISTH1 T.aestivum L mRNA for histone H1
          Length = 1031

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 245 aaggccgcgccggccaagaag 265
           |||||||||||||||||||||
Sbjct: 736 aaggccgcgccggccaagaag 756
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 235    gtccaagaccaaggccgcgcc 255
              |||||||||||||||||||||
Sbjct: 591499 gtccaagaccaaggccgcgcc 591519
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 160     gctctcctcctcctcggcggc 180
               |||||||||||||||||||||
Sbjct: 5426215 gctctcctcctcctcggcggc 5426195



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 156      tcgcgctctcctcctcctcg 175
                ||||||||||||||||||||
Sbjct: 16712229 tcgcgctctcctcctcctcg 16712210



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 353     ggccgtgttgccatgattggcttc 376
               ||||||| ||||||||||||||||
Sbjct: 1346504 ggccgtgctgccatgattggcttc 1346527
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>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1524_D08
          Length = 143046

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 160   gctctcctcctcctcggcggc 180
             |||||||||||||||||||||
Sbjct: 79796 gctctcctcctcctcggcggc 79776
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>gb|AF107022.1|AF107022 Triticum aestivum histone H1 WH1A.1 mRNA, complete cds
          Length = 1050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 245 aaggccgcgccggccaagaag 265
           |||||||||||||||||||||
Sbjct: 710 aaggccgcgccggccaagaag 730
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>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete
              sequences
          Length = 190116

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 467    cccctcctnctcttcttcatcctc 490
              |||||||| |||||||||||||||
Sbjct: 135530 cccctcctcctcttcttcatcctc 135553
to top
>gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome 16, complete sequence
          Length = 190373

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 467   cccctcctnctcttcttcatcctc 490
             |||||||| |||||||||||||||
Sbjct: 74672 cccctcctcctcttcttcatcctc 74649
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>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete
              sequence
          Length = 157397

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ctcgcgctctcctcctcctc 174
              ||||||||||||||||||||
Sbjct: 113740 ctcgcgctctcctcctcctc 113759
to top
>gb|BC101974.1| Homo sapiens heart and neural crest derivatives expressed 2, mRNA
           (cDNA clone IMAGE:40003701), complete cds
          Length = 726

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 674 ctcgcgctctcctcctcctc 655
to top
>gb|BC101406.1| Homo sapiens heart and neural crest derivatives expressed 2, mRNA
           (cDNA clone MGC:125303 IMAGE:40003700), complete cds
          Length = 718

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 666 ctcgcgctctcctcctcctc 647
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>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence
          Length = 245594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 468   ccctcctnctcttcttcatcctc 490
             ||||||| |||||||||||||||
Sbjct: 58404 ccctcctcctcttcttcatcctc 58426
to top
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence
          Length = 190303

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    cccagctgaaccttgagacc 442
              ||||||||||||||||||||
Sbjct: 117090 cccagctgaaccttgagacc 117109
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>gb|DQ214252.1| Taeniopygia guttata clone 0058P0055B08 RIKEN cDNA C330007P06-like
           mRNA, complete sequence
          Length = 1105

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 cgctctcctcctcctcggcg 178
           ||||||||||||||||||||
Sbjct: 264 cgctctcctcctcctcggcg 245
to top
>gb|DQ214251.1| Taeniopygia guttata clone 0061P0025G02 RIKEN cDNA C330007P06-like
           mRNA, complete sequence
          Length = 1435

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 cgctctcctcctcctcggcg 178
           ||||||||||||||||||||
Sbjct: 264 cgctctcctcctcctcggcg 245
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>ref|XM_463959.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1015

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ggccgtgttgccatgattggcttc 376
           ||||||| ||||||||||||||||
Sbjct: 577 ggccgtgctgccatgattggcttc 600
to top
>ref|XM_506700.1| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.6 mRNA
          Length = 1096

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ggccgtgttgccatgattggcttc 376
           ||||||| ||||||||||||||||
Sbjct: 577 ggccgtgctgccatgattggcttc 600
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     ctcttcgtcggccgtgttgc 363
               ||||||||||||||||||||
Sbjct: 2041083 ctcttcgtcggccgtgttgc 2041102
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>ref|XM_471717.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 507

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 128 ctcgcgctctcctcctcctc 109
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>gb|AY022931.1| Oryza sativa microsatellite MRG5256 containing (CTC)X8, closest to
           marker RG908, genomic sequence
          Length = 224

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 93  ctcgcgctctcctcctcctc 112
to top
>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence
          Length = 168853

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     ggcaggagcctgctgcaggc 117
              ||||||||||||||||||||
Sbjct: 130826 ggcaggagcctgctgcaggc 130845
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>ref|XM_323144.1| Neurospora crassa OR74A hypothetical protein (NCU03844.1) partial
            mRNA
          Length = 5655

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  ggcaagtccaagaccaaggc 249
            ||||||||||||||||||||
Sbjct: 1327 ggcaagtccaagaccaaggc 1346
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>ref|XM_955498.1| Neurospora crassa OR74A hypothetical protein (NCU03844.1) partial
            mRNA
          Length = 5655

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  ggcaagtccaagaccaaggc 249
            ||||||||||||||||||||
Sbjct: 1327 ggcaagtccaagaccaaggc 1346
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>ref|NM_028188.1| Mus musculus RUN and SH3 domain containing 1 (Rusc1), mRNA
          Length = 3707

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 2543 ggcaggagcctgctgcaggc 2524
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>gb|AC125151.4| Mus musculus BAC clone RP24-355K8 from chromosome 14, complete sequence
          Length = 202916

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    catgccgtccctctccgtcc 212
              ||||||||||||||||||||
Sbjct: 126445 catgccgtccctctccgtcc 126464
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 155      ctcgcgctctcctcctcctc 174
                ||||||||||||||||||||
Sbjct: 22554406 ctcgcgctctcctcctcctc 22554387
to top
>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence
          Length = 218929

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    ggcaggagcctgctgcaggc 117
             ||||||||||||||||||||
Sbjct: 81882 ggcaggagcctgctgcaggc 81901
to top
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cggcgtggcctccggcagga 104
             ||||||||||||||||||||
Sbjct: 84198 cggcgtggcctccggcagga 84217
to top
>gb|BC056360.1| Mus musculus RUN and SH3 domain containing 1, mRNA (cDNA clone
            MGC:73483 IMAGE:6816267), complete cds
          Length = 3326

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 2142 ggcaggagcctgctgcaggc 2123
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>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence
          Length = 166292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 468    ccctcctnctcttcttcatcctc 490
              ||||||| |||||||||||||||
Sbjct: 165148 ccctcctcctcttcttcatcctc 165170
to top
>gb|BC109383.1| Homo sapiens heart and neural crest derivatives expressed 2, mRNA
           (cDNA clone IMAGE:40003698), partial cds
          Length = 491

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 439 ctcgcgctctcctcctcctc 420
to top
>gb|BC052081.1| Mus musculus RUN and SH3 domain containing 1, mRNA (cDNA clone
           IMAGE:6404352), containing frame-shift errors
          Length = 2163

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  ggcaggagcctgctgcaggc 117
           ||||||||||||||||||||
Sbjct: 938 ggcaggagcctgctgcaggc 919
to top
>ref|XM_504443.1| Yarrowia lipolytica CLIB122, YALI0E26895g predicted mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 327 tcaccaaggagaacgagctc 346
           ||||||||||||||||||||
Sbjct: 401 tcaccaaggagaacgagctc 420
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>gb|AY321335.1| Rattus norvegicus Ac2-125 mRNA, complete cds
          Length = 2646

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 1938 ggcaggagcctgctgcaggc 1919
to top
>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer
             Institute Drosophila BAC library) complete sequence
          Length = 199396

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   cctgttcggcaagtccaaga 242
             ||||||||||||||||||||
Sbjct: 10593 cctgttcggcaagtccaaga 10612
to top
>emb|Z11845.1|SAEVESKIP S.americana mRNA encoding even-skipped
          Length = 2133

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 103 gagcctgctgcaggcggcca 122
           ||||||||||||||||||||
Sbjct: 433 gagcctgctgcaggcggcca 452
to top
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   cggcgtccacgcccttctcg 151
             ||||||||||||||||||||
Sbjct: 51215 cggcgtccacgcccttctcg 51234
to top
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    cggcgtccacgcccttctcg 151
              ||||||||||||||||||||
Sbjct: 333975 cggcgtccacgcccttctcg 333994
to top
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    cggcgtccacgcccttctcg 151
              ||||||||||||||||||||
Sbjct: 144713 cggcgtccacgcccttctcg 144694
to top
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ccaggccgtcgtcggcgtcc 139
              ||||||||||||||||||||
Sbjct: 346591 ccaggccgtcgtcggcgtcc 346610
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>emb|CR857412.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0317 (from clone DKFZp469H0317)
          Length = 4330

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  ctcctcctcctcggcggcct 182
            ||||||||||||||||||||
Sbjct: 1052 ctcctcctcctcggcggcct 1033
to top
>gb|AC093551.3| Drosophila melanogaster 3L BAC RP98-48C13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179055

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    cctgttcggcaagtccaaga 242
              ||||||||||||||||||||
Sbjct: 158021 cctgttcggcaagtccaaga 158040
to top
>ref|NM_021973.2| Homo sapiens heart and neural crest derivatives expressed 2 (HAND2),
            mRNA
          Length = 2368

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  ctcgcgctctcctcctcctc 174
            ||||||||||||||||||||
Sbjct: 1625 ctcgcgctctcctcctcctc 1606
to top
>gb|AC107462.5| Homo sapiens BAC clone RP11-338B9 from 4, complete sequence
          Length = 192173

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggcaagtccaagaccaaggc 249
             ||||||||||||||||||||
Sbjct: 46040 ggcaagtccaagaccaaggc 46021
to top
>dbj|AK122739.1| Homo sapiens cDNA FLJ16260 fis, clone IMR322006947, highly  similar
            to Rattus norvegicus mRNA for dHand protein
          Length = 1652

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  ctcgcgctctcctcctcctc 174
            ||||||||||||||||||||
Sbjct: 1020 ctcgcgctctcctcctcctc 1001
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     cctgctgcaggcggccaggc 125
               ||||||||||||||||||||
Sbjct: 4219198 cctgctgcaggcggccaggc 4219179
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>ref|NM_140996.2| Drosophila melanogaster CG4289-RA (CG4289), mRNA
          Length = 1258

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cctgttcggcaagtccaaga 242
           ||||||||||||||||||||
Sbjct: 570 cctgttcggcaagtccaaga 589
to top
>gb|AY089608.1| Drosophila melanogaster RE22286 full insert cDNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 223 cctgttcggcaagtccaaga 242
           ||||||||||||||||||||
Sbjct: 570 cctgttcggcaagtccaaga 589
to top
>gb|AC096576.3| Homo sapiens BAC clone RP11-556G22 from 4, complete sequence
          Length = 213044

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ggcaagtccaagaccaaggc 249
              ||||||||||||||||||||
Sbjct: 206067 ggcaagtccaagaccaaggc 206048
to top
>gb|AC093849.2| Homo sapiens BAC clone RP11-489G11 from 4, complete sequence
          Length = 156195

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ctcgcgctctcctcctcctc 174
              ||||||||||||||||||||
Sbjct: 135766 ctcgcgctctcctcctcctc 135785
to top
>dbj|AK155528.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630312L17
            product:hypothetical protein, full insert sequence
          Length = 2624

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 1653 ggcaggagcctgctgcaggc 1634
to top
>dbj|AK170012.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630008E06
           product:RUN and SH3 domain containing 1, full insert
           sequence
          Length = 1922

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  ggcaggagcctgctgcaggc 117
           ||||||||||||||||||||
Sbjct: 758 ggcaggagcctgctgcaggc 739
to top
>dbj|AK170009.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630008A15
            product:RUN and SH3 domain containing 1, full insert
            sequence
          Length = 2624

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 1653 ggcaggagcctgctgcaggc 1634
to top
>dbj|AK170210.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630030L04
           product:RUN and SH3 domain containing 1, full insert
           sequence
          Length = 1518

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  ggcaggagcctgctgcaggc 117
           ||||||||||||||||||||
Sbjct: 707 ggcaggagcctgctgcaggc 688
to top
>gb|S49864.1| psbS=photosystem II 22 kda polypeptide [spinach, mRNA, 1012 nt]
          Length = 1012

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 329 accaaggagaacgagctcttcgtcggccgtgttgccatgattgg 372
           ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 347 accaaggagaatgaactctttgtgggtcgtgttgctatgattgg 390
to top
>dbj|AK042689.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730016C08 product:NESCA PROTEIN
            homolog [Homo sapiens], full insert sequence
          Length = 3316

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 2152 ggcaggagcctgctgcaggc 2133
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>dbj|AK032334.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430520N11 product:NESCA PROTEIN
            homolog [Homo sapiens], full insert sequence
          Length = 2398

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 1234 ggcaggagcctgctgcaggc 1215
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>dbj|AK039664.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched
            library, clone:A330080H03 product:NESCA PROTEIN homolog
            [Homo sapiens], full insert sequence
          Length = 3707

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 2543 ggcaggagcctgctgcaggc 2524
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>gb|AC175825.2| Pan troglodytes BAC clone CH251-171E12 from chromosome unknown, complete
              sequence
          Length = 179085

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 230    ggcaagtccaagaccaaggc 249
              ||||||||||||||||||||
Sbjct: 134414 ggcaagtccaagaccaaggc 134395
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 160      gctctcctcctcctcggcgg 179
                ||||||||||||||||||||
Sbjct: 26015775 gctctcctcctcctcggcgg 26015756



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     ctctcctcctcctcggcggc 180
               ||||||||||||||||||||
Sbjct: 2742909 ctctcctcctcctcggcggc 2742890
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 155      ctcgcgctctcctcctcctc 174
                ||||||||||||||||||||
Sbjct: 22547435 ctcgcgctctcctcctcctc 22547416
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>ref|NM_174474.1| Bos taurus troponin T1, skeletal, slow (TNNT1), mRNA
          Length = 887

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ctcctcctcctcggcggcct 182
           ||||||||||||||||||||
Sbjct: 80  ctcctcctcctcggcggcct 61
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 148     ctcgcggctcgcgctctcct 167
               ||||||||||||||||||||
Sbjct: 5107398 ctcgcggctcgcgctctcct 5107379
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>ref|XM_574978.1| PREDICTED: Rattus norvegicus similar to Ac2-125 (LOC499654), mRNA
          Length = 3723

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   ggcaggagcctgctgcaggc 117
            ||||||||||||||||||||
Sbjct: 2555 ggcaggagcctgctgcaggc 2536
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>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510F09
          Length = 138277

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    gctcgcgctctcctcctcctcggc 177
              ||||||| ||||||||||||||||
Sbjct: 111922 gctcgcggtctcctcctcctcggc 111945
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>gb|AC161282.5| Pan troglodytes BAC clone CH251-381O9 from chromosome unknown, complete
              sequence
          Length = 172427

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    ggcaagtccaagaccaaggc 249
              ||||||||||||||||||||
Sbjct: 141323 ggcaagtccaagaccaaggc 141342
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>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0482F12
          Length = 147735

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 353   ggccgtgttgccatgattggcttc 376
             ||||||| ||||||||||||||||
Sbjct: 27776 ggccgtgctgccatgattggcttc 27799
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 442     cggcatcccgatctacgagg 461
               ||||||||||||||||||||
Sbjct: 2328787 cggcatcccgatctacgagg 2328768
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>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0529C07
          Length = 174011

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    ctctcctcctcctcggcggc 180
              ||||||||||||||||||||
Sbjct: 154656 ctctcctcctcctcggcggc 154637
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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gctctcctcctcctcggcgg 179
             ||||||||||||||||||||
Sbjct: 53633 gctctcctcctcctcggcgg 53614
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>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0091C16
          Length = 162527

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   tcgcgctctcctcctcctcg 175
             ||||||||||||||||||||
Sbjct: 89284 tcgcgctctcctcctcctcg 89265
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>emb|X68552.1|SOPSII S.oleracea mRNA for photosystem II 22kDa protein
          Length = 972

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 329 accaaggagaacgagctcttcgtcggccgtgttgccatgattgg 372
           ||||||||||| || ||||| || || |||||||| ||||||||
Sbjct: 306 accaaggagaatgaactctttgtgggtcgtgttgctatgattgg 349
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>dbj|AK111276.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-G08, full
           insert sequence
          Length = 1010

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 246 ctcgcgctctcctcctcctc 227
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>dbj|AK106752.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D01, full
           insert sequence
          Length = 2218

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 ctctcctcctcctcggcggc 180
           ||||||||||||||||||||
Sbjct: 262 ctctcctcctcctcggcggc 243
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>dbj|AK101502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E02, full
           insert sequence
          Length = 1014

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ggccgtgttgccatgattggcttc 376
           ||||||| ||||||||||||||||
Sbjct: 576 ggccgtgctgccatgattggcttc 599
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>dbj|AK073555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046A07, full
           insert sequence
          Length = 1414

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 154 gctcgcgctctcctcctcctcggc 177
           ||||||| ||||||||||||||||
Sbjct: 56  gctcgcggtctcctcctcctcggc 79
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>emb|Z63094.1|HS78C5F H.sapiens CpG island DNA genomic Mse1 fragment, clone 78c5, forward
           read cpg78c5.ft1a
          Length = 287

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 155 ctcgcgctctcctcctcctc 174
           ||||||||||||||||||||
Sbjct: 208 ctcgcgctctcctcctcctc 227
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>dbj|AK072625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129O11, full
           insert sequence
          Length = 2153

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 161 ctctcctcctcctcggcggc 180
           ||||||||||||||||||||
Sbjct: 205 ctctcctcctcctcggcggc 186
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>dbj|AK071006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I12, full
           insert sequence
          Length = 1096

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 353 ggccgtgttgccatgattggcttc 376
           ||||||| ||||||||||||||||
Sbjct: 577 ggccgtgctgccatgattggcttc 600
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>gb|BC057034.1| Mus musculus RUN and SH3 domain containing 1, mRNA (cDNA clone
           MGC:67218 IMAGE:5687517), complete cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  ggcaggagcctgctgcaggc 117
           ||||||||||||||||||||
Sbjct: 810 ggcaggagcctgctgcaggc 791
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>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete
              sequence
          Length = 323816

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    cctgttcggcaagtccaaga 242
              ||||||||||||||||||||
Sbjct: 150901 cctgttcggcaagtccaaga 150920
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>emb|AL138479.4|CNS01DWS Human chromosome 14 DNA sequence BAC R-242G5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165228

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ggcaagtccaagaccaaggc 249
             ||||||||||||||||||||
Sbjct: 60478 ggcaagtccaagaccaaggc 60497
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>dbj|AB085601.1| Bos taurus Tnnt1 mRNA for troponin T slow skeletal muscle type,
           complete cds, isoform:sTnT2
          Length = 854

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ctcctcctcctcggcggcct 182
           ||||||||||||||||||||
Sbjct: 80  ctcctcctcctcggcggcct 61
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>dbj|AB085600.1| Bos taurus Tnnt1 mRNA for troponin T slow skeletal muscle type,
           complete cds, isoform:sTnT1
          Length = 887

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ctcctcctcctcggcggcct 182
           ||||||||||||||||||||
Sbjct: 80  ctcctcctcctcggcggcct 61
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 72     tgtccggcgtcaacggcgtggcct 95
              |||||||| |||||||||||||||
Sbjct: 102642 tgtccggcatcaacggcgtggcct 102665
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>gb|DQ176000.1| Xenopus laevis RPGR ORF15 isoform mRNA, partial cds
          Length = 1845

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 468  ccctcctnctcttcttcatcctc 490
            ||||||| |||||||||||||||
Sbjct: 1247 ccctcctcctcttcttcatcctc 1225



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 468  ccctcctnctcttcttcatcctc 490
            ||||||| |||||||||||||||
Sbjct: 1175 ccctcctcctcttcttcatcctc 1153



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 468  ccctcctnctcttcttcatcctc 490
            ||||||| |||||||||||||||
Sbjct: 1151 ccctcctcctcttcttcatcctc 1129



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 468  ccctcctnctcttcttcatcctc 490
            ||||||| |||||||||||||||
Sbjct: 1025 ccctcctgctcttcttcatcctc 1003



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 468 ccctcctnctcttcttcatcctc 490
           ||||||| |||||||||||||||
Sbjct: 953 ccctcctcctcttcttcatcctc 931
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 441     ccggcatcccgatctacgaggcggagcc 468
               ||||||||||| |||||| |||||||||
Sbjct: 3904459 ccggcatcccggtctacgcggcggagcc 3904432
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>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09,
             complete sequence
          Length = 187359

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ctcgcgctctcctcctcctc 174
             ||||||||||||||||||||
Sbjct: 71783 ctcgcgctctcctcctcctc 71802
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 331     caaggagaacgagctcttcgtcgg 354
               ||||||||||||||||||| ||||
Sbjct: 4147229 caaggagaacgagctcttcttcgg 4147206
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     tcaccaaggagaacgagctc 346
               ||||||||||||||||||||
Sbjct: 3188948 tcaccaaggagaacgagctc 3188967
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>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
             sequence
          Length = 220275

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 468   ccctcctnctcttcttcatcctc 490
             ||||||| |||||||||||||||
Sbjct: 79816 ccctcctcctcttcttcatcctc 79838


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,630,007
Number of Sequences: 3902068
Number of extensions: 3630007
Number of successful extensions: 81475
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79678
Number of HSP's gapped (non-prelim): 1792
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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