>RF1_ORYSA (Q76C99) Rf1 protein, mitochondrial precursor (PPR protein)|
           (Fertility restorer) (Restorer for CMS)
          Length = 791

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 20/91 (21%), Positives = 35/91 (38%)
 Frame = +2

Query: 44  VVNAXXXXXXXNKAXSILDEMTAQGAYVGLAIYSPILKAYCKEQKTXXXXXXXXXXXXXG 223
           V+N        +KA S   EM  +G    +  Y+ I+ A CK Q               G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261

Query: 224 LQLDAGSYDALIDASMTAHDFQSAFALFKDM 316
           +  D  +Y++++    ++   + A    K M
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/93 (22%), Positives = 38/93 (40%)
 Frame = +2

Query: 92  ILDEMTAQGAYVGLAIYSPILKAYCKEQKTXXXXXXXXXXXXXGLQLDAGSYDALIDASM 271
           +LD M   G +    ++S ++ AY K+ K              GL  +A +Y A+I    
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC 417

Query: 272 TAHDFQSAFALFKDMXEARLPDLRTSYLTIMTG 370
            +   + A   F+ M +  L      Y +++ G
Sbjct: 418 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 450



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = +2

Query: 83  AXSILDEMTAQGAYVGLAIYSPILKAYCKEQKTXXXXXXXXXXXXXGLQLDAGSYDALID 262
           A  +   +T  G  + L+ Y+ IL   CK + T              L+L+A +++ +ID
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659

Query: 263 ASMTAHDFQSAFALF 307
           A +       A  LF
Sbjct: 660 ALLKVGRNDEAKDLF 674

>Y4791_ARATH (P0C043) Hypothetical PPR-repeat protein At4g17915|
          Length = 463

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +2

Query: 92  ILDEMTAQGAYVGLAIYSPILKAYCKEQK-TXXXXXXXXXXXXXGLQLDAGSYDALIDAS 268
           + DEM   G Y  L  Y+ ++  Y K  K               GL     +Y+ L+DA 
Sbjct: 105 LFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDAL 164

Query: 269 MTAHDFQSAFALFKDMXEARLPDLRTSYLTI 361
                  +A  LFK+M     P+L T  + I
Sbjct: 165 CKCGYIDNALELFKEMQSRFKPELMTYNILI 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,558,116
Number of Sequences: 219361
Number of extensions: 442052
Number of successful extensions: 785
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)