Clone Information

BLAST Search Result

Clone Name	bah62o15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	369	e-102
2	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	337	2e-92
3	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	298	1e-80
4	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	291	8e-79
5	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	246	3e-65
6	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	246	5e-65
7	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	246	5e-65
8	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	242	5e-64
9	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	239	3e-63
10	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	238	1e-62
11	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	237	2e-62
12	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	235	7e-62
13	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	234	1e-61
14	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	234	1e-61
15	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	234	2e-61
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	161	2e-39
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	92	9e-19
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	92	1e-18
19	G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	32	1.4
20	RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae	31	2.4
21	PTR2_CANAL (P46030) Peptide transporter PTR2	31	2.4
22	PCRB_SULAC (Q4JAS3) Protein pcrB homolog	31	2.4
23	KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	2.4
24	KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	2.4
25	ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.2
26	TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1...	30	4.2
27	ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl trans...	30	5.4
28	VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG)...	30	5.4
29	COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	5.4
30	ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl trans...	30	5.4
31	ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl trans...	30	5.4
32	PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC ...	30	5.4
33	KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 ...	30	7.1
34	KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast pr...	30	7.1
35	DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)	30	7.1
36	UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK...	29	9.3
37	UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK...	29	9.3
38	PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor t...	29	9.3
39	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	29	9.3
40	CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor...	29	9.3
41	RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107	29	9.3
42	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	29	9.3
43	CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Casto...	29	9.3
44	PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC ...	29	9.3
45	PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC ...	29	9.3

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  369 bits (948), Expect = e-102
 Identities = 183/184 (99%), Positives = 183/184 (99%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 233
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 234 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGG 413
           WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGG
Sbjct: 61  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGG 120

Query: 414 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 593
           FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS
Sbjct: 121 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 180

Query: 594 AGEL 605
           AGEL
Sbjct: 181 AGEL 184

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  337 bits (863), Expect = 2e-92
 Identities = 168/186 (90%), Positives = 175/186 (94%), Gaps = 2/186 (1%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 230
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + TD 
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 231 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTM 407
            +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTM
Sbjct: 60  DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTM 119

Query: 408 GGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM 587
           GGFYIAP+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIM
Sbjct: 120 GGFYIAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIM 179

Query: 588 MSAGEL 605
           MSAGEL
Sbjct: 180 MSAGEL 185

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  298 bits (762), Expect = 1e-80
 Identities = 152/190 (80%), Positives = 167/190 (87%), Gaps = 6/190 (3%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 221
           MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 222 NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 395
            TD  +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F
Sbjct: 61  QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120

Query: 396 DNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 575
           DN M GFYIA  FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI
Sbjct: 121 DNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 180

Query: 576 NPIMMSAGEL 605
            PIMMSAGEL
Sbjct: 181 TPIMMSAGEL 190

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  291 bits (746), Expect = 8e-79
 Identities = 149/188 (79%), Positives = 163/188 (86%), Gaps = 4/188 (2%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 227
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 228 D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDN 401
           D  +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDN
Sbjct: 55  DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDN 114

Query: 402 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 581
           TM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINP
Sbjct: 115 TMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 174

Query: 582 IMMSAGEL 605
           IMMSAGEL
Sbjct: 175 IMMSAGEL 182

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  246 bits (629), Expect = 3e-65
 Identities = 125/179 (69%), Positives = 143/179 (79%)
 Frame = +3

Query: 69  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 248
           S  V APAST   FLGKK    V +   +   + K+N    + A   D++ + D+W+GLA
Sbjct: 23  SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75

Query: 249 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 428
           YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAP
Sbjct: 76  YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAP 135

Query: 429 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           AFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGEL
Sbjct: 136 AFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGEL 194

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  246 bits (627), Expect = 5e-65
 Identities = 126/195 (64%), Positives = 150/195 (76%), Gaps = 11/195 (5%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 203
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 204 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 380
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 381 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 560
           R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF
Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 561 AKMGINPIMMSAGEL 605
           AKMGINPIMMSAGEL
Sbjct: 180 AKMGINPIMMSAGEL 194

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  246 bits (627), Expect = 5e-65
 Identities = 126/195 (64%), Positives = 150/195 (76%), Gaps = 11/195 (5%)
 Frame = +3

Query: 54  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 203
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 204 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 380
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 381 RKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVF 560
           R+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVF
Sbjct: 120 RQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVF 179

Query: 561 AKMGINPIMMSAGEL 605
           AKMGINPIMMSAGEL
Sbjct: 180 AKMGINPIMMSAGEL 194

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  242 bits (618), Expect = 5e-64
 Identities = 123/181 (67%), Positives = 144/181 (79%), Gaps = 2/181 (1%)
 Frame = +3

Query: 69  SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 242
           SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22  SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 243 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 422
           LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YI
Sbjct: 74  LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYI 133

Query: 423 APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 602
           APAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGE
Sbjct: 134 APAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGE 193

Query: 603 L 605
           L
Sbjct: 194 L 194

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  239 bits (611), Expect = 3e-63
 Identities = 126/194 (64%), Positives = 143/194 (73%), Gaps = 16/194 (8%)
 Frame = +3

Query: 72  STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 209
           ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6   STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 210 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 383
           D K+ TD  +WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 384 KYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFA 563
           +Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF 
Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFR 184

Query: 564 KMGINPIMMSAGEL 605
           KMGINPIMMSAGEL
Sbjct: 185 KMGINPIMMSAGEL 198

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  238 bits (606), Expect = 1e-62
 Identities = 120/178 (67%), Positives = 145/178 (81%), Gaps = 3/178 (1%)
 Frame = +3

Query: 81  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 251
           G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22  GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 431
           D+SDDQQDITRGKG+VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYIAPA
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140

Query: 432 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 198

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  237 bits (604), Expect = 2e-62
 Identities = 121/185 (65%), Positives = 141/185 (76%), Gaps = 4/185 (2%)
 Frame = +3

Query: 63  AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 230
           + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17  SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 231 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMG 410
           +WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ 
Sbjct: 74  RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLD 133

Query: 411 GFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 590
           GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMM
Sbjct: 134 GFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMM 193

Query: 591 SAGEL 605
           SAGEL
Sbjct: 194 SAGEL 198

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  235 bits (600), Expect = 7e-62
 Identities = 125/178 (70%), Positives = 141/178 (79%), Gaps = 3/178 (1%)
 Frame = +3

Query: 81  GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 251
           GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 431
           DISDDQQDITRGKG+VD LFQAP   GTH AV+SSYEY+S GLR+   DN   GFYIAPA
Sbjct: 81  DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138

Query: 432 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL
Sbjct: 139 FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 196

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  234 bits (598), Expect = 1e-61
 Identities = 122/175 (69%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
 Frame = +3

Query: 84  APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 260
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 261 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 440
           DDQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD DN +G FYIAPAFMD
Sbjct: 78  DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137

Query: 441 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGEL
Sbjct: 138 KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGEL 192

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  234 bits (597), Expect = 1e-61
 Identities = 121/196 (61%), Positives = 142/196 (72%), Gaps = 14/196 (7%)
 Frame = +3

Query: 60  AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 197
           AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2   AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 198 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 377
            ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G
Sbjct: 56  EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115

Query: 378 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 557
           LR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 116 LRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 175

Query: 558 FAKMGINPIMMSAGEL 605
           FAKMGINPIMMSAGEL
Sbjct: 176 FAKMGINPIMMSAGEL 191

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  234 bits (596), Expect = 2e-61
 Identities = 120/196 (61%), Positives = 141/196 (71%), Gaps = 14/196 (7%)
 Frame = +3

Query: 60  AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 197
           AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 198 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 377
           A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ 
Sbjct: 59  AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117

Query: 378 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 557
           L+ Y  DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV
Sbjct: 118 LKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 177

Query: 558 FAKMGINPIMMSAGEL 605
           F KMGINPIMMSAGEL
Sbjct: 178 FRKMGINPIMMSAGEL 193

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  161 bits (407), Expect = 2e-39
 Identities = 79/133 (59%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
 Frame = +3

Query: 216 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 386
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 387 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 566
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K
Sbjct: 95  ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

Query: 567 MGINPIMMSAGEL 605
           +GI PI+MSAGEL
Sbjct: 155 LGIAPIVMSAGEL 167

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score = 92.4 bits (228), Expect = 9e-19
 Identities = 39/64 (60%), Positives = 52/64 (81%)
 Frame = +3

Query: 414 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 593
           +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62

Query: 594 AGEL 605
            GEL
Sbjct: 63  GGEL 66

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 39/64 (60%), Positives = 52/64 (81%)
 Frame = +3

Query: 414 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 593
           +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62

Query: 594 AGEL 605
            GEL
Sbjct: 63  GGEL 66

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>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 548

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 363 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 542
           Y SQ +  YD    M   Y+    M+    H++    T+P   +P+I G+ G  GQ   +
Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387

Query: 543 QC 548
           QC
Sbjct: 388 QC 389

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>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +3

Query: 84  APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 263
           +PA+ P+  +G+K++  V+   ++ G   K++   +   +    KR T ++ G  + +SD
Sbjct: 35  SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89

Query: 264 D--QQDITRGKGIVDSLFQAPTGDG 332
           D  ++ + R K  +D +  + T DG
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDG 114

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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -1

Query: 331 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 185
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

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>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 419 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 243
           +EA  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234

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>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 495 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 495 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 276 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 446
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121

Query: 447 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 533
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 251

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 26/95 (27%), Positives = 42/95 (44%)
 Frame = -3

Query: 524 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 345
           L    T++E    +  G ++ G  +  L       +E   G  E + P+A  DVL+ AE 
Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212

Query: 344 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 240
           G+       R+ E   DAL  G  ++  GD+ + T
Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246

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>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 276 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 446
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121

Query: 447 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 533
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa|
           protein) (ORF 2)
          Length = 142

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 574 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 437
           M I++ TSS W   P PL PPQ+P +   ++  R  +   + T S S
Sbjct: 49  MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94

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>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 208

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 489 KIPLILGIWGGKGQGKSFQCELVFAKMG 572
           ++PL++G+ GG G GKS  C ++ A+MG
Sbjct: 4   RLPLLVGVTGGIGSGKSTVCAML-AEMG 30

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>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 276 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 446
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 447 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 533
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 276 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 446
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 447 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 533
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -3

Query: 491 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 327
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   LV A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233

Query: 326 ARGRLEERVHDALPSGDVLLVVG 258
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253

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>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 210

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 465 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           N   L    +P+   I GG G GK  QC+ + AK G+    +S+G+L
Sbjct: 11  NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54

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>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 283

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 495 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 605
           PL + I G    GK  QCEL+  K G+  + +SAG+L
Sbjct: 64  PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98

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>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1060

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = +3

Query: 150  NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 329
            N+H K +      + A +  D  R       LAY+++D    +       D +F A +G 
Sbjct: 807  NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858

Query: 330  GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 488
            G   HEA     E  S+   KYDF+  + G  + P  +  L      NF  L  +
Sbjct: 859  GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907

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>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 495 PLILGIWGGKGQGKSFQCELVFAKMGINPI 584
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52

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>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 495 PLILGIWGGKGQGKSFQCELVFAKMGINPI 584
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52

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>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 252 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 386
           D S   +D  RGKG+            THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 446  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRA 604
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA
Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRA 1980

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>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Epidermal growth factor-like 2) (Multiple epidermal
            growth factor-like domains 3) (Flamingo 1)
          Length = 2923

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 446  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRA 604
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA
Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRA 1979

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>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107|
          Length = 1070

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +3

Query: 162 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 320
           K  + +   +++ E++  K++TDK+  L   +SD+   I   K  V+S +  P
Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +2

Query: 446  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRA 604
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA
Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRA 1204

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>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related|
           protein) (Fragment)
          Length = 255

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 30  QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 137
           QG PS     +  +   G+PA  P+ FLGK +K  V
Sbjct: 52  QGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87

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>PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -3

Query: 491 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 327
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   LV A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISSPEALQNPVHLVIANILLAPLI 233

Query: 326 ARGRLEERVHDALPSGDVLLVVG 258
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253

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>PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -3

Query: 491 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 327
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   L+ A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISTPEALQNPVHLIIANILLAPLI 233

Query: 326 ARGRLEERVHDALPSGDVLLVVG 258
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,770,884
Number of Sequences: 219361
Number of extensions: 1728716
Number of successful extensions: 6102
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 5874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6089
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5367617986
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

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BLAST Search Result