ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63d14 |
|---|---|
| Clone Library Name | barley_pub |
>Y5712_ARATH (O04658) Hypothetical protein At5g27120| Length = 439 Score = 290 bits (743), Expect = 2e-78 Identities = 142/183 (77%), Positives = 164/183 (89%) Frame = +3 Query: 24 KVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGETLAVADSKLGNAIKEK 203 K+V+L AF+KF+NT++AL A L++ PSKGLRKFL+ +C GETLAVADSKLGN IKEK Sbjct: 40 KMVKLVAFDKFDNTAEALEAVAKLLEGTPSKGLRKFLKANCVGETLAVADSKLGNIIKEK 99 Query: 204 LKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSPEKVDTM 383 LKI C+HN+AVMEL+RG+R+QLTEL+SGL + DLGPMSLGLSHSL+RYKLKFS +KVDTM Sbjct: 100 LKIVCVHNNAVMELLRGIRSQLTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTM 159 Query: 384 IIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVNAVNLD 563 IIQAIGLLDDLDKELNTYAMRVREW+GWHFPEL KIV DNI YAKAVK+MGNR+NA LD Sbjct: 160 IIQAIGLLDDLDKELNTYAMRVREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLD 219 Query: 564 FSE 572 FSE Sbjct: 220 FSE 222
>NOP5_RAT (Q9QZ86) Nucleolar protein NOP5 (Nucleolar protein 5)| (Nopp140-associated protein) Length = 534 Score = 209 bits (533), Expect = 3e-54 Identities = 104/188 (55%), Positives = 139/188 (73%), Gaps = 2/188 (1%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDG--ETLAVADSKLGN 188 K K+V+LK F KF++T++AL+A T L++ K +K L+K L+K E LAVAD+KLG Sbjct: 37 KANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGG 96 Query: 189 AIKEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSPE 368 IKEKL + C+H+ V ELMRG+R+Q+ L+ G+ ++ M LGL+HSLSRY+LKFS + Sbjct: 97 VIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSAD 156 Query: 369 KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVN 548 KVDTMI+QAI LLDDLDKELN Y MR REWYGWHFPEL KI++DN+ Y K ++ +G+R N Sbjct: 157 KVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKN 216 Query: 549 AVNLDFSE 572 + SE Sbjct: 217 YASATLSE 224
>NOP5_HUMAN (Q9Y2X3) Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58)| Length = 529 Score = 209 bits (533), Expect = 3e-54 Identities = 104/188 (55%), Positives = 139/188 (73%), Gaps = 2/188 (1%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDG--ETLAVADSKLGN 188 K K+V+LK F KF++T++AL+A T L++ K +K L+K L+K E LAVAD+KLG Sbjct: 37 KANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKKVLKKIVKEAHEPLAVADAKLGG 96 Query: 189 AIKEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSPE 368 IKEKL + C+H+ V ELMRG+R+Q+ L+ G+ ++ M LGL+HSLSRY+LKFS + Sbjct: 97 VIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSAD 156 Query: 369 KVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVN 548 KVDTMI+QAI LLDDLDKELN Y MR REWYGWHFPEL KI++DN+ Y K ++ +G+R N Sbjct: 157 KVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKN 216 Query: 549 AVNLDFSE 572 + SE Sbjct: 217 YASAKLSE 224
>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)| Length = 511 Score = 178 bits (451), Expect = 1e-44 Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 3/189 (1%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQ--KHCDGETLAVADSKLGN 188 K K ++ AF+KF + ++AL A +I+ K S L K L+ K TL V+++KL N Sbjct: 37 KVLKEFKIAAFSKFNSAANALEEANSIIEGKVSSQLEKLLEEIKKDKKSTLIVSETKLAN 96 Query: 189 AI-KEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSP 365 AI K L + + ++ +++ R ++ L EL+ G++++DL MSLGL+HS+ R+KLKFS Sbjct: 97 AINKLGLNFNVVSDAVTLDIYRAIKEYLPELLPGMSDNDLSKMSLGLAHSIGRHKLKFSA 156 Query: 366 EKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRV 545 +KVD MIIQAI LLDDLDKELNTYAMR +EWYGWHFPEL KIV D++ YA+ + MG R Sbjct: 157 DKVDVMIIQAIALLDDLDKELNTYAMRCKEWYGWHFPELAKIVTDSVAYARIILTMGIRS 216 Query: 546 NAVNLDFSE 572 A D SE Sbjct: 217 KASETDLSE 225
>Y5714_ARATH (O04656) Hypothetical protein At5g27140| Length = 435 Score = 169 bits (428), Expect = 5e-42 Identities = 102/194 (52%), Positives = 125/194 (64%), Gaps = 12/194 (6%) Frame = +3 Query: 27 VVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGETLAVADSKLGNAIKEKL 206 +V+LKAF+KF+NTS+ L A LI S R + D L ++D Sbjct: 1 MVKLKAFHKFDNTSE-LQARLWLIQSLEISSQRNWCVFCYD--LLHISD----------- 46 Query: 207 KIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSPEKVD--- 377 I+C+HN AVMEL+RG+R+QLTEL+SGL ++DL P+SL LSH L+RYKLK + +KV Sbjct: 47 -IECVHNDAVMELLRGVRSQLTELLSGLDDNDLAPVSLELSHILARYKLKITSDKVVIEF 105 Query: 378 ---------TMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKM 530 TMII +I LLDDLDKELNTY V E YG HFPEL IV DNI YAK VK+ Sbjct: 106 SVFCFTLAYTMIILSISLLDDLDKELNTYTTSVCELYGLHFPELANIVQDNILYAKVVKL 165 Query: 531 MGNRVNAVNLDFSE 572 MGNR+NA LDFSE Sbjct: 166 MGNRINAATLDFSE 179
>SIK1_YEAST (Q12460) Protein SIK1 (Nucleolar protein NOP56)| Length = 504 Score = 144 bits (364), Expect = 1e-34 Identities = 78/183 (42%), Positives = 112/183 (61%), Gaps = 8/183 (4%) Frame = +3 Query: 24 KVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGE-------TLAVADSKL 182 K++EL +F F+ ++AL A + + S+ L+ L + TLA++D L Sbjct: 46 KLIELVSFAPFKGAAEALENANDISEGLVSESLKAILDLNLPKASSKKKNITLAISDKNL 105 Query: 183 GNAIKEKLK-IDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKF 359 G +IKE+ +DC+ N +L+RG+R +L GL DL LGL H+ SR K+KF Sbjct: 106 GPSIKEEFPYVDCISNELAQDLIRGVRLHGEKLFKGLQSGDLERAQLGLGHAYSRAKVKF 165 Query: 360 SPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGN 539 S +K D IIQAI LLD LDK++NT+AMRV+EWYGWHFPEL K+V DN +AK V + + Sbjct: 166 SVQKNDNHIIQAIALLDQLDKDINTFAMRVKEWYGWHFPELAKLVPDNYTFAKLVLFIKD 225 Query: 540 RVN 548 + + Sbjct: 226 KAS 228
>NOP56_PONPY (Q5RA29) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 594 Score = 144 bits (362), Expect = 2e-34 Identities = 76/180 (42%), Positives = 107/180 (59%), Gaps = 4/180 (2%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGET----LAVADSKL 182 K +V L AF F ++ AL A + + + LR L+ H + L V D K+ Sbjct: 41 KFHNIVRLVAFCPFASSQVALENANAVSEGVVHEDLRLLLETHLPSKKKRVLLGVGDPKI 100 Query: 183 GNAIKEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFS 362 G AI+E+L +C + E++RG+R L+ GL + LGL HS SR K+KF+ Sbjct: 101 GAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRTKVKFN 160 Query: 363 PEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNR 542 +VD MIIQ+I LLD LDK++NT++MRVREWYG+HFPEL KI+ DN Y + + +GNR Sbjct: 161 VNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNR 220
>NOP56_MACFA (Q95K50) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 594 Score = 144 bits (362), Expect = 2e-34 Identities = 76/180 (42%), Positives = 107/180 (59%), Gaps = 4/180 (2%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGET----LAVADSKL 182 K +V L AF F ++ AL A + + + LR L+ H + L V D K+ Sbjct: 41 KFHNIVRLVAFCPFASSQVALENANAVSEGVVHEDLRLLLETHLPSKKKKVLLGVGDPKI 100 Query: 183 GNAIKEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFS 362 G AI+E+L +C + E++RG+R L+ GL + LGL HS SR K+KF+ Sbjct: 101 GAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFN 160 Query: 363 PEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNR 542 +VD MIIQ+I LLD LDK++NT++MRVREWYG+HFPEL KI+ DN Y + + +GNR Sbjct: 161 VNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNR 220
>NOP56_HUMAN (O00567) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 594 Score = 144 bits (362), Expect = 2e-34 Identities = 76/180 (42%), Positives = 107/180 (59%), Gaps = 4/180 (2%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGET----LAVADSKL 182 K +V L AF F ++ AL A + + + LR L+ H + L V D K+ Sbjct: 41 KFHSIVRLVAFCPFASSQVALENANAVSEGVVHEDLRLLLETHLPSKKKKVLLGVGDPKI 100 Query: 183 GNAIKEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFS 362 G AI+E+L +C + E++RG+R L+ GL + LGL HS SR K+KF+ Sbjct: 101 GAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFN 160 Query: 363 PEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNR 542 +VD MIIQ+I LLD LDK++NT++MRVREWYG+HFPEL KI+ DN Y + + +GNR Sbjct: 161 VNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIINDNATYCRLAQFIGNR 220
>NOP56_MOUSE (Q9D6Z1) Nucleolar protein Nop56 (Nucleolar protein 5A)| Length = 580 Score = 142 bits (359), Expect = 5e-34 Identities = 77/180 (42%), Positives = 107/180 (59%), Gaps = 4/180 (2%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGET----LAVADSKL 182 K VV L AF F ++ AL A + + + LR L+ + + L V D K+ Sbjct: 41 KFHNVVRLVAFCPFSSSQVALENANAVSEGVVHEDLRLLLETYLPSKKKKVLLGVGDPKI 100 Query: 183 GNAIKEKLKIDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFS 362 G AI+E+L +C + E++RG+R L+ GL + LGL HS SR K+KF+ Sbjct: 101 GAAIQEELGYNCQTGGVIAEILRGVRLHFHNLVKGLTDLSACKAQLGLGHSYSRAKVKFN 160 Query: 363 PEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNR 542 +VD MIIQ+I LLD LDK++NT++MRVREWYG+HFPEL KIV DN Y + + +GNR Sbjct: 161 VNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHFPELVKIVNDNATYCRLAQFIGNR 220
>YZVL_CAEEL (Q21276) Hypothetical protein K07C5.4 in chromosome V| Length = 486 Score = 120 bits (302), Expect = 2e-27 Identities = 67/187 (35%), Positives = 99/187 (52%), Gaps = 6/187 (3%) Frame = +3 Query: 15 KQXKVVELKAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGE----TLAVADSKL 182 K ++VEL +F+ F+NT AL + + L FLQK + L + DSKL Sbjct: 43 KFSQIVELASFDPFKNTEAALENCNSISEGLAHPDLTNFLQKSLPKKKKHVVLGINDSKL 102 Query: 183 GNAIKEKLK-IDCLHNSAVMELMRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKF 359 ++ E + + + E++RG R L L H L L L HS SR K+KF Sbjct: 103 AGSLTEAFPDLKLVFGGVITEILRGTRVHFERLAKNLPHHSLSKAQLSLGHSYSRSKVKF 162 Query: 360 SPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAK-AVKMMG 536 +VD M+IQ+I LLD LDK++N + MR+REWY +H+PEL ++ D Y++ AV ++ Sbjct: 163 DVHRVDNMVIQSIALLDQLDKDINLFGMRIREWYSYHYPELFRLAPDQYKYSRLAVAILD 222 Query: 537 NRVNAVN 557 A N Sbjct: 223 RNKMAEN 229
>Y694_METJA (Q58105) Hypothetical protein MJ0694| Length = 414 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +3 Query: 327 SHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNI 506 S L++ +K ++ D +IIQ + DLDK LN + R+REWY +FPEL +V + Sbjct: 107 STELTKKVIKSYAQQKDKIIIQVAEAISDLDKTLNLLSERLREWYSLYFPELDHLVNKHE 166 Query: 507 HYAKAVKMMGNRVN 548 YA + +G R N Sbjct: 167 VYANLITKLGKRKN 180
>PRP31_BRARE (Q7SXM7) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 508 Score = 40.8 bits (94), Expect = 0.003 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = +3 Query: 381 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRV 545 +I+ A L ++D ELN VR+ Y FPEL +V + + Y + VK +GN + Sbjct: 103 LIVAANNLTVEIDNELNIIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNNL 157
>PRP31_XENTR (Q6NVP6) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 498 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +3 Query: 381 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVN 548 +I+ A L +++ ELN +R+ Y FPEL +V + + Y + VK +GN ++ Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLD 146
>PRP31_XENLA (Q5U5C5) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) Length = 498 Score = 39.3 bits (90), Expect = 0.008 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +3 Query: 381 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVN 548 +I+ A L +++ ELN +R+ Y FPEL +V + + Y + VK +GN ++ Sbjct: 91 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNNLD 146
>PRP31_MOUSE (Q8CCF0) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) (U4/U6 snRNP 61 kDa protein) (Protein 61K) Length = 499 Score = 38.9 bits (89), Expect = 0.010 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +3 Query: 381 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVN 548 +I+ A L +++ ELN +R+ Y FPEL +V + + Y + VK +GN ++ Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLD 147
>PRP31_HUMAN (Q8WWY3) U4/U6 small nuclear ribonucleoprotein Prp31 (Pre-mRNA| processing factor 31) (U4/U6 snRNP 61 kDa protein) (hPrp31) (Protein 61K) (Serologically defined breast cancer antigen NY-BR-99) Length = 499 Score = 38.9 bits (89), Expect = 0.010 Identities = 18/56 (32%), Positives = 32/56 (57%) Frame = +3 Query: 381 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGNRVN 548 +I+ A L +++ ELN +R+ Y FPEL +V + + Y + VK +GN ++ Sbjct: 92 VIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLD 147
>PRP31_SCHPO (O42904) Pre-mRNA-splicing factor 31| Length = 518 Score = 35.0 bits (79), Expect = 0.15 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = +3 Query: 381 MIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAKAVKMMGN 539 +I+ + + ++D E+ V+EWY FPEL+ +V + Y K V + N Sbjct: 119 LIVDSNSIAMEIDDEILRLHRLVKEWYHDRFPELSSLVLNAFDYCKTVSSLLN 171
>NSDHL_MOUSE (Q9R1J0) Sterol-4-alpha-carboxylate 3-dehydrogenase,| decarboxylating (EC 1.1.1.170) Length = 362 Score = 33.1 bits (74), Expect = 0.58 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = +3 Query: 345 YKLKFSPEKVDTMIIQAIGLLDDLDKELN--TYAMRVREWYGWHFPELTKIVADNIHYAK 518 Y +K +T I+Q +LD D + N T A+R +G P+L I+ D K Sbjct: 153 YAMKPIDYYTETKILQERAVLDANDPKKNFLTAAIRPHGIFGPRDPQLVPILIDAARKGK 212 Query: 519 AVKMMGNRVNAVNLDFSE 572 M+GN N V+ F E Sbjct: 213 MKFMIGNGENLVDFTFVE 230
>TDRD4_HUMAN (Q9NUY9) Tudor domain-containing protein 4| Length = 633 Score = 32.3 bits (72), Expect = 0.98 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 13/146 (8%) Frame = +3 Query: 27 VVELKAFNKFEN---TSDALSAATLLIDSKPSKGLRKFLQKHCDGETLAVADSKLGNAIK 197 VV + K E T LS L+D +P+ G K+ CD +L + G Sbjct: 57 VVNVDCLRKLEENLKTMGRLSLECSLVDIRPAGGSDKWTATACDCLSLYLT----GAVAT 112 Query: 198 EKLKIDCLHNSAVMELM--------RGLRNQLTELM--SGLAEHDLGPMSLGLSHSLSRY 347 L++D N+ L +G R +++ + GLA + +L SHSLS Sbjct: 113 IILQVDSEENNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERRINNLDNSHSLSEK 172 Query: 348 KLKFSPEKVDTMIIQAIGLLDDLDKE 425 L+ E+ D+++ I D DK+ Sbjct: 173 SLEVPLEQEDSVVTNCIKTNFDPDKK 198
>FCGRN_MACFA (Q8SPV9) IgG receptor FcRn large subunit p51 precursor (FcRn)| (Neonatal Fc receptor) (IgG Fc fragment receptor transporter, alpha chain) Length = 365 Score = 31.2 bits (69), Expect = 2.2 Identities = 23/65 (35%), Positives = 30/65 (46%) Frame = +3 Query: 246 MRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKE 425 +R LRN + +G + D GP S G H+ S +K E I+Q GL L E Sbjct: 233 LRFLRNGMA---AGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYCCIVQHAGLAQPLRVE 289 Query: 426 LNTYA 440 L T A Sbjct: 290 LETPA 294
>ENV2_DROME (P20829) Retrovirus-related Env polyprotein from transposon 297| Length = 471 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/71 (30%), Positives = 34/71 (47%) Frame = -3 Query: 569 REVKVHCINTIAHHLHSFSIMDIICNNFRELGKVPTVPFTDPHSISVKLLVKIIQQANCL 390 +EVK C+ I HL+ ICN F+ + + + +P++I L + I NC Sbjct: 284 KEVKNECVTNIIKHLNP------ICN-FKPVHTNEIIKYIEPNTIVTWNLTQTILNQNCQ 336 Query: 389 NDHSINLFRAE 357 N SIN + E Sbjct: 337 N--SINKIKIE 345
>PSD_CLOPA (Q46192) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)| [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] Length = 296 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/55 (30%), Positives = 29/55 (52%) Frame = +3 Query: 39 KAFNKFENTSDALSAATLLIDSKPSKGLRKFLQKHCDGETLAVADSKLGNAIKEK 203 K+FN F++ +D S L+ S+P + FL CDG+ + + + N I+ K Sbjct: 78 KSFNDFKSFNDFFSRK-LIKSSRPIADNKNFLISPCDGKIIVYNNINMNNIIQVK 131
>FCGRN_HUMAN (P55899) IgG receptor FcRn large subunit p51 precursor (FcRn)| (Neonatal Fc receptor) (IgG Fc fragment receptor transporter, alpha chain) Length = 365 Score = 30.4 bits (67), Expect = 3.7 Identities = 23/65 (35%), Positives = 30/65 (46%) Frame = +3 Query: 246 MRGLRNQLTELMSGLAEHDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKE 425 +R LRN L +G + D GP S G H+ S +K E I+Q GL L E Sbjct: 233 LRFLRNGLA---AGTGQGDFGPNSDGSFHASSSLTVKSGDEHHYCCIVQHAGLAQPLRVE 289 Query: 426 LNTYA 440 L + A Sbjct: 290 LESPA 294
>TCO1_PIG (P17630) Transcobalamin-1 precursor (Transcobalamin I) (TCI) (TC I)| (Haptocorrin) (R protein) (Cobalophilin) (Fragment) Length = 416 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -3 Query: 470 VPTVPFTDPHSISVKLLVKIIQQANCLN 387 VP VP P +ISV VKI + +NC+N Sbjct: 317 VPVVPTLSPENISVIYCVKINEISNCIN 344
>SYL_BORGA (Q662B4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 840 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 387 IQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIVADNIHYAK 518 I+A+G D D+E+ T+ +W W F EL K + YAK Sbjct: 115 IKALGFAYDWDREIRTHDENYYKWTQWIFLELYK---KGLAYAK 155
>SYL_MYCPU (Q98RB6) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 807 Score = 29.3 bits (64), Expect = 8.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 Query: 387 IQAIGLLDDLDKELNTYAMRVREWYGWHFPELTK 488 I+++GL D DKE+NT + E W F EL K Sbjct: 109 IKSLGLSYDFDKEVNTTDPKFYEQTQWIFKELYK 142
>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF| 2) (6-deoxyerythronolide B synthase II) (DEBS 2) Length = 3566 Score = 29.3 bits (64), Expect = 8.3 Identities = 21/71 (29%), Positives = 39/71 (54%) Frame = -1 Query: 322 PRLIGPRSCSASPDISSVSWFLSPLISSMTALL*RQSIFSFSLIAFPSLESATANVSPSQ 143 PR I R S SP+++ + L+ + ++TA+ R S+ S + ++++ + S Sbjct: 2197 PRRIAVRYASHSPEVARIEDRLAAELGTITAV--RGSVPLHSTVTGEVIDTSAMDAS--- 2251 Query: 142 CFCRNLRRPLL 110 + RNLRRP+L Sbjct: 2252 YWYRNLRRPVL 2262
>GUAA_EHRCJ (Q3YT30) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 526 Score = 29.3 bits (64), Expect = 8.3 Identities = 17/63 (26%), Positives = 32/63 (50%) Frame = -3 Query: 515 SIMDIICNNFRELGKVPTVPFTDPHSISVKLLVKIIQQANCLNDHSINLFRAELQLIPRQ 336 +++ +ICN R++ + P + + LL I+ A C D ++N F E Q + ++ Sbjct: 156 NVIAMICNEERKIYGMQFHPEVYHTTDGIALLSNFIKIAGCKTDWTMNSFLDEQQRVIKK 215 Query: 335 AVG 327 VG Sbjct: 216 QVG 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,583,214 Number of Sequences: 219361 Number of extensions: 1390774 Number of successful extensions: 4019 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3906 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4010 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
