ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63d14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092O17, full insert sequence Length = 2340 Score = 502 bits (253), Expect = e-139 Identities = 448/513 (87%) Strand = Plus / Plus Query: 23 aaaggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagc 82 |||||||||||||||||||||||||||||||||||| || || || ||||| ||||| || Sbjct: 445 aaaggtggttgagctgaaggctttcaacaagtttgagaacacatctgatgccctttctgc 504 Query: 83 tgcaactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagca 142 |||||| | | ||||| |||||||| | ||| ||| ||||||||||| |||||||||| Sbjct: 505 tgcaaccctcattattgacagcaagcctaccaagggtttgcgcaagttcttgcagaagca 564 Query: 143 ctgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaa 202 |||||| ||||||||||| ||||| || || ||||||||||| |||||||| || || || Sbjct: 565 ctgtgagggtgaaacattagctgtggctgactctaaacttggaaatgctataaaggagaa 624 Query: 203 gctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaa 262 |||||||||||| |||||||| || |||||||| |||||||| ||||||||| | || || Sbjct: 625 gctgaaaattgactgccttcataatagtgctgtgatggagctcatgagagggttaagaaa 684 Query: 263 ccagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctagg 322 |||||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || Sbjct: 685 ccagctcactgaacttatctctggtttgggtgcacaagaccttggtccaatgagccttgg 744 Query: 323 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactat 382 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 745 cttgtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggttgatactat 804 Query: 383 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctat 442 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 805 gatcattcaggccattggcttattggatgatcttgacaaggagcttaacacttatgccat 864 Query: 443 gagggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataa 502 |||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 865 gagggttcgtgaatggtatgggtggcactttccagagctcactaaaattgtagctgataa 924 Query: 503 tatccattatgctaaagctgtgaagatgatggg 535 || || || || |||| ||||||||||||||| Sbjct: 925 catacagtacgcaaaagttgtgaagatgatggg 957
>dbj|AK101143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026N20, full insert sequence Length = 1882 Score = 502 bits (253), Expect = e-139 Identities = 448/513 (87%) Strand = Plus / Plus Query: 23 aaaggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagc 82 |||||||||||||||||||||||||||||||||||| || || || ||||| ||||| || Sbjct: 330 aaaggtggttgagctgaaggctttcaacaagtttgagaacacatctgatgccctttctgc 389 Query: 83 tgcaactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagca 142 |||||| | | ||||| |||||||| | ||| ||| ||||||||||| |||||||||| Sbjct: 390 tgcaaccctcattattgacagcaagcctaccaagggtttgcgcaagttcttgcagaagca 449 Query: 143 ctgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaa 202 |||||| ||||||||||| ||||| || || ||||||||||| |||||||| || || || Sbjct: 450 ctgtgagggtgaaacattagctgtggctgactctaaacttggaaatgctataaaggagaa 509 Query: 203 gctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaa 262 |||||||||||| |||||||| || |||||||| |||||||| ||||||||| | || || Sbjct: 510 gctgaaaattgactgccttcataatagtgctgtgatggagctcatgagagggttaagaaa 569 Query: 263 ccagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctagg 322 |||||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || Sbjct: 570 ccagctcactgaacttatctctggtttgggtgcacaagaccttggtccaatgagccttgg 629 Query: 323 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactat 382 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 630 cttgtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggttgatactat 689 Query: 383 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctat 442 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 690 gatcattcaggccattggcttattggatgatcttgacaaggagcttaacacttatgccat 749 Query: 443 gagggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataa 502 |||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 750 gagggttcgtgaatggtatgggtggcactttccagagctcactaaaattgtagctgataa 809 Query: 503 tatccattatgctaaagctgtgaagatgatggg 535 || || || || |||| ||||||||||||||| Sbjct: 810 catacagtacgcaaaagttgtgaagatgatggg 842
>dbj|AK073164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023B01, full insert sequence Length = 2147 Score = 494 bits (249), Expect = e-136 Identities = 447/513 (87%) Strand = Plus / Plus Query: 23 aaaggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagc 82 ||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 320 aaaggtggtcgagctgaaggctttcaacaagtttgagaacacctccgatgccctttcagc 379 Query: 83 tgcaactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagca 142 |||||| | | ||||| |||||||| | ||| ||| ||||||| ||| |||||||||| Sbjct: 380 tgcaaccctcattattgacagcaagcctaccaagggtttgcgcaaattcttgcagaagca 439 Query: 143 ctgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaa 202 |||||| |||||||| || ||||| || || ||||||||||| |||||||| || || || Sbjct: 440 ctgtgagggtgaaacgttagctgtagctgactctaaacttggaaatgctataaaggagaa 499 Query: 203 gctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaa 262 ||||||||||||||||||||| ||||||||||| |||||||| ||||||||| | ||||| Sbjct: 500 gctgaaaattgattgccttcataacagtgctgtgatggagctcatgagagggttaaggaa 559 Query: 263 ccagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctagg 322 |||||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || Sbjct: 560 ccagctcactgaacttatatctggtttgggtgcacaagaccttggtccaatgagccttgg 619 Query: 323 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactat 382 ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 620 attgtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggttgatactat 679 Query: 383 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctat 442 |||||||||||| ||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 680 gatcattcaggccattggattattggatgatcttgataaggagctcaacacttacgccat 739 Query: 443 gagggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataa 502 |||||| ||||||||||| || |||||||| || |||||||| |||||||| || ||||| Sbjct: 740 gagggttcgtgaatggtatgggtggcacttcccagagctcactaaaattgtagctgataa 799 Query: 503 tatccattatgctaaagctgtgaagatgatggg 535 || || || || |||| ||||||||||||||| Sbjct: 800 catacagtacgcaaaagttgtgaagatgatggg 832
>dbj|AB015431.1| Oryza sativa mRNA for SAR DNA binding protein, partial cds Length = 1638 Score = 494 bits (249), Expect = e-136 Identities = 447/513 (87%) Strand = Plus / Plus Query: 23 aaaggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagc 82 |||||||||||||||||||||||||||||||||||| || || || ||||| ||||| || Sbjct: 299 aaaggtggttgagctgaaggctttcaacaagtttgagaacacatctgatgccctttctgc 358 Query: 83 tgcaactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagca 142 |||||| | | ||||| |||||||| | ||| ||| ||||||||||| |||||||||| Sbjct: 359 tgcaaccctcattattgacagcaagcctaccaagggtttgcgcaagttcttgcagaagca 418 Query: 143 ctgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaa 202 |||||| ||||||||||| ||||| || || ||||||||||| |||||||| || || || Sbjct: 419 ctgtgagggtgaaacattagctgtggctgactctaaacttggaaatgctataaaggagaa 478 Query: 203 gctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaa 262 |||||||||||| |||||||| || |||||||| |||||||| |||||| || | || || Sbjct: 479 gctgaaaattgactgccttcataatagtgctgtgatggagctcatgagaaggttaagaaa 538 Query: 263 ccagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctagg 322 |||||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || Sbjct: 539 ccagctcactgaacttatctctggtttgggtgcacaagaccttggtccaatgagccttgg 598 Query: 323 attgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactat 382 ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 599 cttgtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggttgatactat 658 Query: 383 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctat 442 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 659 gatcattcaggccattggcttattggatgatcttgacaaggagcttaacacttatgccat 718 Query: 443 gagggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgcagataa 502 |||||| ||||||||||| || ||||||||||| |||||||| |||||||| || ||||| Sbjct: 719 gagggttcgtgaatggtatgggtggcactttccagagctcactaaaattgtagctgataa 778 Query: 503 tatccattatgctaaagctgtgaagatgatggg 535 || || || || |||| ||||||||||||||| Sbjct: 779 catacagtacgcaaaagttgtgaagatgatggg 811
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 9e-49 Identities = 150/166 (90%) Strand = Plus / Minus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 13102876 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 13102817 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 489 |||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| Sbjct: 13102816 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 13102757 Query: 490 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 535 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13102756 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13102711 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaacca 265 |||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||||| Sbjct: 13110636 gaaaattgattgccttcataacagtgctgtgatggagctcatgagagggttaaggaacca 13110577 Query: 266 gcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggatt 325 ||| ||||||||||| ||||| | | || ||| || || |||||||||||||| ||||| Sbjct: 13110576 gctcactgaacttatatctggtttgggtgcacaagaccttggtccaatgagccttggatt 13110517 Query: 326 gtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggtt 374 |||||||||| ||||||| ||||||||||||||||| |||||||||||| Sbjct: 13110516 gtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggtt 13110468 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| | Sbjct: 13110191 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 13110132 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 489 ||||||| || |||||||| ||||||||||| || |||||||| || |||||||| |||| Sbjct: 13110131 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 13110072 Query: 490 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 535 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13110071 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13110026 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 25 aggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagctg 84 ||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 13110890 aggtggtcgagctgaaggctttcaacaagtttgagaacacctccgatgccctttcagctg 13110831 Query: 85 caactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagcact 144 |||| | | ||||| |||||||| | ||| ||| ||||||| ||| |||||||||||| Sbjct: 13110830 caaccctcattattgacagcaagcctaccaagggtttgcgcaaattcttgcagaagcact 13110771 Query: 145 gtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagc 204 |||| |||||||| || ||||| || || ||||||||||| |||||||| || || |||| Sbjct: 13110770 gtgagggtgaaacgttagctgtagctgactctaaacttggaaatgctataaaggagaagc 13110711 Query: 205 tg 206 || Sbjct: 13110710 tg 13110709 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 25 aggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagctg 84 |||||||||||||||||||||||||||||||||| || || || ||||| ||||| |||| Sbjct: 13103576 aggtggttgagctgaaggctttcaacaagtttgagaacacatctgatgccctttctgctg 13103517 Query: 85 caactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagcact 144 |||| | | ||||| |||||||| | ||| ||| ||||||||||| |||||||||||| Sbjct: 13103516 caaccctcattattgacagcaagcctaccaagggtttgcgcaagttcttgcagaagcact 13103457 Query: 145 gtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagc 204 |||| ||||||||||| ||||| || || ||||||||||| |||||||| || || |||| Sbjct: 13103456 gtgagggtgaaacattagctgtggctgactctaaacttggaaatgctataaaggagaagc 13103397 Query: 205 tg 206 || Sbjct: 13103396 tg 13103395 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaacca 265 ||||||||| |||||||| || |||||||| |||||||| ||||||||| | || ||||| Sbjct: 13103322 gaaaattgactgccttcataatagtgctgtgatggagctcatgagagggttaagaaacca 13103263 Query: 266 gcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggatt 325 ||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || || Sbjct: 13103262 gctcactgaacttatctctggtttgggtgcacaagaccttggtccaatgagccttggctt 13103203 Query: 326 gtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggt 373 ||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 13103202 gtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggt 13103155
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 202 bits (102), Expect = 9e-49 Identities = 150/166 (90%) Strand = Plus / Plus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 123762 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 123821 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 489 |||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| Sbjct: 123822 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 123881 Query: 490 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 535 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 123882 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 123927 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaacca 265 |||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||||| Sbjct: 116002 gaaaattgattgccttcataacagtgctgtgatggagctcatgagagggttaaggaacca 116061 Query: 266 gcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggatt 325 ||| ||||||||||| ||||| | | || ||| || || |||||||||||||| ||||| Sbjct: 116062 gctcactgaacttatatctggtttgggtgcacaagaccttggtccaatgagccttggatt 116121 Query: 326 gtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggtt 374 |||||||||| ||||||| ||||||||||||||||| |||||||||||| Sbjct: 116122 gtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggtt 116170 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| | Sbjct: 116447 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 116506 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 489 ||||||| || |||||||| ||||||||||| || |||||||| || |||||||| |||| Sbjct: 116507 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 116566 Query: 490 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 535 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 116567 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 116612 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 25 aggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagctg 84 |||||||||||||||||||||||||||||||||| || || || ||||| ||||| |||| Sbjct: 123062 aggtggttgagctgaaggctttcaacaagtttgagaacacatctgatgccctttctgctg 123121 Query: 85 caactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagcact 144 |||| | | ||||| |||||||| | ||| ||| ||||||||||| |||||||||||| Sbjct: 123122 caaccctcattattgacagcaagcctaccaagggtttgcgcaagttcttgcagaagcact 123181 Query: 145 gtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagc 204 |||| ||||||||||| ||||| || || ||||||||||| |||||||| || || |||| Sbjct: 123182 gtgagggtgaaacattagctgtggctgactctaaacttggaaatgctataaaggagaagc 123241 Query: 205 tg 206 || Sbjct: 123242 tg 123243 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 25 aggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagctg 84 ||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 115748 aggtggtcgagctgaaggctttcaacaagtttgagaacacctccgatgccctttcagctg 115807 Query: 85 caactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagcact 144 |||| | | ||||| |||||||| | ||| ||| ||||||| ||| |||||||||||| Sbjct: 115808 caaccctcattattgacagcaagcctaccaagggtttgcgcaaattcttgcagaagcact 115867 Query: 145 gtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagc 204 |||| |||||||| || ||||| || || ||||||||||| |||||||| || || |||| Sbjct: 115868 gtgagggtgaaacgttagctgtagctgactctaaacttggaaatgctataaaggagaagc 115927 Query: 205 tg 206 || Sbjct: 115928 tg 115929 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaacca 265 ||||||||| |||||||| || |||||||| |||||||| ||||||||| | || ||||| Sbjct: 123316 gaaaattgactgccttcataatagtgctgtgatggagctcatgagagggttaagaaacca 123375 Query: 266 gcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggatt 325 ||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || || Sbjct: 123376 gctcactgaacttatctctggtttgggtgcacaagaccttggtccaatgagccttggctt 123435 Query: 326 gtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggt 373 ||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 123436 gtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggt 123483
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 9e-49 Identities = 150/166 (90%) Strand = Plus / Minus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 13099651 aggttgatactatgatcattcaggccattggcttattggatgatcttgacaaggagctta 13099592 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 489 |||||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||| Sbjct: 13099591 acacttatgccatgagggttcgtgaatggtatgggtggcactttccagagctcactaaaa 13099532 Query: 490 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 535 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13099531 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13099486 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaacca 265 |||||||||||||||||| ||||||||||| |||||||| ||||||||| | |||||||| Sbjct: 13107411 gaaaattgattgccttcataacagtgctgtgatggagctcatgagagggttaaggaacca 13107352 Query: 266 gcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggatt 325 ||| ||||||||||| ||||| | | || ||| || || |||||||||||||| ||||| Sbjct: 13107351 gctcactgaacttatatctggtttgggtgcacaagaccttggtccaatgagccttggatt 13107292 Query: 326 gtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggtt 374 |||||||||| ||||||| ||||||||||||||||| |||||||||||| Sbjct: 13107291 gtcccacagcctgtctagatataagctgaagttcagtcctgaaaaggtt 13107243 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Minus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 ||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| | Sbjct: 13106966 aggttgatactatgatcattcaggccattggattattggatgatcttgataaggagctca 13106907 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaa 489 ||||||| || |||||||| ||||||||||| || |||||||| || |||||||| |||| Sbjct: 13106906 acacttacgccatgagggttcgtgaatggtatgggtggcacttcccagagctcactaaaa 13106847 Query: 490 ttgttgcagataatatccattatgctaaagctgtgaagatgatggg 535 |||| || ||||| || || || || |||| ||||||||||||||| Sbjct: 13106846 ttgtagctgataacatacagtacgcaaaagttgtgaagatgatggg 13106801 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 25 aggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagctg 84 ||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||| Sbjct: 13107665 aggtggtcgagctgaaggctttcaacaagtttgagaacacctccgatgccctttcagctg 13107606 Query: 85 caactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagcact 144 |||| | | ||||| |||||||| | ||| ||| ||||||| ||| |||||||||||| Sbjct: 13107605 caaccctcattattgacagcaagcctaccaagggtttgcgcaaattcttgcagaagcact 13107546 Query: 145 gtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagc 204 |||| |||||||| || ||||| || || ||||||||||| |||||||| || || |||| Sbjct: 13107545 gtgagggtgaaacgttagctgtagctgactctaaacttggaaatgctataaaggagaagc 13107486 Query: 205 tg 206 || Sbjct: 13107485 tg 13107484 Score = 155 bits (78), Expect = 2e-34 Identities = 156/182 (85%) Strand = Plus / Minus Query: 25 aggtggttgagctgaaggctttcaacaagtttgaaaatacctccgatgctctttcagctg 84 |||||||||||||||||||||||||||||||||| || || || ||||| ||||| |||| Sbjct: 13100351 aggtggttgagctgaaggctttcaacaagtttgagaacacatctgatgccctttctgctg 13100292 Query: 85 caactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcagaagcact 144 |||| | | ||||| |||||||| | ||| ||| ||||||||||| |||||||||||| Sbjct: 13100291 caaccctcattattgacagcaagcctaccaagggtttgcgcaagttcttgcagaagcact 13100232 Query: 145 gtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagc 204 |||| ||||||||||| ||||| || || ||||||||||| |||||||| || || |||| Sbjct: 13100231 gtgagggtgaaacattagctgtggctgactctaaacttggaaatgctataaaggagaagc 13100172 Query: 205 tg 206 || Sbjct: 13100171 tg 13100170 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgaggaacca 265 ||||||||| |||||||| || |||||||| |||||||| ||||||||| | || ||||| Sbjct: 13100097 gaaaattgactgccttcataatagtgctgtgatggagctcatgagagggttaagaaacca 13100038 Query: 266 gcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctaggatt 325 ||| ||||||||||| ||||| | | || ||| || || |||||||||||||| || || Sbjct: 13100037 gctcactgaacttatctctggtttgggtgcacaagaccttggtccaatgagccttggctt 13099978 Query: 326 gtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggt 373 ||||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 13099977 gtcccacagtttgtctagatataagctgaagttcagtcctgaaaaggt 13099930
>gb|AY106099.1| Zea mays PCO066535 mRNA sequence Length = 1500 Score = 202 bits (102), Expect = 9e-49 Identities = 153/170 (90%) Strand = Plus / Plus Query: 405 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 464 ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 57 ttggatgatcttgacaaggagcttaacacttatgccatgagagttcgtgaatggtatggc 116 Query: 465 tggcactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtg 524 ||||||||||| |||||||| ||||| ||| |||||||||| || ||||| |||| |||| Sbjct: 117 tggcactttccagagctcaccaaaatagttacagataatatacagtatgccaaagttgtg 176 Query: 525 aagatgatgggcaatcgtgttaatgcagtgaaccttgacttctctgagat 574 |||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 177 aagatgatgggcaacagagttaatgcagtcaaccttgacttctctgagat 226 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 383 gatcattcaggcaattggcttgttggatgatcttgacaaggagcttaac 431 |||||| || || ||||| || ||||||||||||||||||||||||||| Sbjct: 66 gatcatccaagccattggattattggatgatcttgacaaggagcttaac 18
>ref|NM_122594.2| Arabidopsis thaliana DNA binding AT5G27120 mRNA, complete cds Length = 1856 Score = 167 bits (84), Expect = 5e-38 Identities = 276/340 (81%) Strand = Plus / Plus Query: 142 actgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaa 201 |||||| |||||||||||| |||||||| |||||||| ||||| ||| ||||| || | Sbjct: 303 actgtgttggtgaaacattagctgttgctgattctaagcttggaaatatcatcaaggaga 362 Query: 202 agctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgagga 261 | |||||||| | || ||||||||| |||||| ||||||||| | ||||| | || | Sbjct: 363 aactgaaaatagtctgtgttcacaacaatgctgttatggagctgttaagaggtatcagaa 422 Query: 262 accagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctag 321 |||||| ||||||||||| |||||| | | ||| || |||||||||||||||||| | | Sbjct: 423 gccagctaactgaacttatatctggattgggtgatcaagatctaggtccaatgagcttgg 482 Query: 322 gattgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatacta 381 | ||||| |||||| | | || ||||| || |||||||| | || ||||| ||||| | Sbjct: 483 ggttgtctcacagccttgccagatataaactaaagttcagttccgacaaggtggatacca 542 Query: 382 tgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgcta 441 |||| || || || ||||| || | |||||||||||||| |||||||||||||| |||| Sbjct: 543 tgataatccaagctattggtctgcttgatgatcttgacaaagagcttaacacttacgcta 602 Query: 442 tgagggtccgtgaatggtacggttggcactttcccgagct 481 ||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 603 tgagggttcgtgaatggtttggttggcattttcctgagct 642
>gb|AY074281.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1856 Score = 167 bits (84), Expect = 5e-38 Identities = 276/340 (81%) Strand = Plus / Plus Query: 142 actgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaa 201 |||||| |||||||||||| |||||||| |||||||| ||||| ||| ||||| || | Sbjct: 303 actgtgttggtgaaacattagctgttgctgattctaagcttggaaatatcatcaaggaga 362 Query: 202 agctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgagga 261 | |||||||| | || ||||||||| |||||| ||||||||| | ||||| | || | Sbjct: 363 aactgaaaatagtctgtgttcacaacaatgctgttatggagctgttaagaggtatcagaa 422 Query: 262 accagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctag 321 |||||| ||||||||||| |||||| | | ||| || |||||||||||||||||| | | Sbjct: 423 gccagctaactgaacttatatctggattgggtgatcaagatctaggtccaatgagcttgg 482 Query: 322 gattgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatacta 381 | ||||| |||||| | | || ||||| || |||||||| | || ||||| ||||| | Sbjct: 483 ggttgtctcacagccttgccagatataaactaaagttcagttccgacaaggtggatacca 542 Query: 382 tgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgcta 441 |||| || || || ||||| || | |||||||||||||| |||||||||||||| |||| Sbjct: 543 tgataatccaagctattggtctgcttgatgatcttgacaaagagcttaacacttacgcta 602 Query: 442 tgagggtccgtgaatggtacggttggcactttcccgagct 481 ||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 603 tgagggttcgtgaatggtttggttggcattttcctgagct 642
>gb|AF302490.1|AF302490 Arabidopsis thaliana NOP58-like protein F108 mRNA, complete cds Length = 1781 Score = 167 bits (84), Expect = 5e-38 Identities = 276/340 (81%) Strand = Plus / Plus Query: 142 actgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaa 201 |||||| |||||||||||| |||||||| |||||||| ||||| ||| ||||| || | Sbjct: 236 actgtgttggtgaaacattagctgttgctgattctaagcttggaaatatcatcaaggaga 295 Query: 202 agctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgagga 261 | |||||||| | || ||||||||| |||||| ||||||||| | ||||| | || | Sbjct: 296 aactgaaaatagtctgtgttcacaacaatgctgttatggagctgttaagaggtatcagaa 355 Query: 262 accagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctag 321 |||||| ||||||||||| |||||| | | ||| || |||||||||||||||||| | | Sbjct: 356 gccagctaactgaacttatatctggattgggtgatcaagatctaggtccaatgagcttgg 415 Query: 322 gattgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatacta 381 | ||||| |||||| | | || ||||| || |||||||| | || ||||| ||||| | Sbjct: 416 ggttgtctcacagccttgccagatataaactaaagttcagttccgacaaggtggatacca 475 Query: 382 tgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgcta 441 |||| || || || ||||| || | |||||||||||||| |||||||||||||| |||| Sbjct: 476 tgataatccaagctattggtctgcttgatgatcttgacaaagagcttaacacttacgcta 535 Query: 442 tgagggtccgtgaatggtacggttggcactttcccgagct 481 ||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 536 tgagggttcgtgaatggtttggttggcattttcctgagct 575
>gb|BT002060.1| Arabidopsis thaliana SAR DNA-binding protein - like (At5g27120) mRNA, partial cds Length = 1351 Score = 167 bits (84), Expect = 5e-38 Identities = 276/340 (81%) Strand = Plus / Plus Query: 142 actgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaa 201 |||||| |||||||||||| |||||||| |||||||| ||||| ||| ||||| || | Sbjct: 318 actgtgttggtgaaacattagctgttgctgattctaagcttggaaatatcatcaaggaga 377 Query: 202 agctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgagga 261 | |||||||| | || ||||||||| |||||| ||||||||| | ||||| | || | Sbjct: 378 aactgaaaatagtctgtgttcacaacaatgctgttatggagctgttaagaggtatcagaa 437 Query: 262 accagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctag 321 |||||| ||||||||||| |||||| | | ||| || |||||||||||||||||| | | Sbjct: 438 gccagctaactgaacttatatctggattgggtgatcaagatctaggtccaatgagcttgg 497 Query: 322 gattgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatacta 381 | ||||| |||||| | | || ||||| || |||||||| | || ||||| ||||| | Sbjct: 498 ggttgtctcacagccttgccagatataaactaaagttcagttccgacaaggtggatacca 557 Query: 382 tgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgcta 441 |||| || || || ||||| || | |||||||||||||| |||||||||||||| |||| Sbjct: 558 tgataatccaagctattggtctgcttgatgatcttgacaaagagcttaacacttacgcta 617 Query: 442 tgagggtccgtgaatggtacggttggcactttcccgagct 481 ||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 618 tgagggttcgtgaatggtttggttggcattttcctgagct 657
>gb|AY096684.1| Arabidopsis thaliana putative SAR DNA-binding protein (At5g27120) mRNA, complete cds Length = 1633 Score = 159 bits (80), Expect = 1e-35 Identities = 275/340 (80%) Strand = Plus / Plus Query: 142 actgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaa 201 |||||| |||||||||||| |||||||| |||||||| ||||| ||| ||||| || | Sbjct: 236 actgtgttggtgaaacattagctgttgctgattctaagcttggaaatatcatcaaggaga 295 Query: 202 agctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctgagga 261 | |||||||| | || ||||||||| |||||| ||||||||| | ||||| | || | Sbjct: 296 aactgaaaatagtctgtgttcacaacaatgctgttatggagctgttaagaggtatcagaa 355 Query: 262 accagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagcctag 321 |||||| ||||||||||| |||||| | | ||| || |||||||||||||||||| | | Sbjct: 356 gccagctaactgaacttatatctggattgggtgatcaagatctaggtccaatgagcttgg 415 Query: 322 gattgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatacta 381 | || || |||||| | | || ||||| || |||||||| | || ||||| ||||| | Sbjct: 416 ggttatctcacagccttgccagatataaactaaagttcagttccgacaaggtggatacca 475 Query: 382 tgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgcta 441 |||| || || || ||||| || | |||||||||||||| |||||||||||||| |||| Sbjct: 476 tgataatccaagctattggtctgcttgatgatcttgacaaagagcttaacacttacgcta 535 Query: 442 tgagggtccgtgaatggtacggttggcactttcccgagct 481 ||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 536 tgagggttcgtgaatggtttggttggcattttcctgagct 575
>gb|BT013761.1| Lycopersicon esculentum clone 132644F, mRNA sequence Length = 2206 Score = 137 bits (69), Expect = 4e-29 Identities = 390/497 (78%) Strand = Plus / Plus Query: 78 tcagctgcaactttgctaattgatagcaagcccagcaaaggtctgcgcaagttcctgcag 137 ||||| |||||||| | || ||||||||||| |||||||| || || ||||| || | Sbjct: 334 tcagcagcaactttattgatagatagcaagcctagcaaaggacttcgaaagtttttgaaa 393 Query: 138 aagcactgtgatggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaa 197 ||||||||||||||||||| ||| | |||| ||||| |||||||| ||||| || ||| Sbjct: 394 gcgcactgtgatggtgaaacactgggtattgctgattcaaaacttggtaatgcgattaaa 453 Query: 198 gaaaagctgaaaattgattgccttcacaacagtgctgtcatggagctgatgagagggctg 257 || || ||| ||||||| || ||||||| | || ||| ||||| ||||||||||| || Sbjct: 454 gagaaactgcaaattgaatgtgttcacaataatgttgtgatggaattgatgagagggttg 513 Query: 258 aggaaccagcttactgaacttatgtctggactagctgaacatgatctaggtccaatgagc 317 || | ||| | |||||||| || ||||| || || || || | | |||||||||| Sbjct: 514 agtagtcagttaactgaactcatatctggtctggccactcaagacttggctccaatgagc 573 Query: 318 ctaggattgtcccacagcttgtctaggtataagctgaagttcagccctgaaaaggttgat 377 | || ||||| ||||| | || || || |||||||| || || ||||| ||||| ||| Sbjct: 574 ttgggtttgtctcacagtctttcaagatacaagctgaaatttagtcctgacaaggtggat 633 Query: 378 actatgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttat 437 || ||||| | ||||| ||||| ||||||||||||||||| || ||||| ||||| ||| Sbjct: 634 acaatgattgtccaggccattggtttgttggatgatcttgataaagagctgaacacctat 693 Query: 438 gctatgagggtccgtgaatggtacggttggcactttcccgagctcacgaaaattgttgca 497 || |||||||| || |||||||| || ||||| ||||| |||||| | || ||||| | Sbjct: 694 gcaatgagggtacgagaatggtatggctggcattttcctgagctcgcaaagattgtacaa 753 Query: 498 gataatatccattatgctaaagctgtgaagatgatgggcaatcgtgttaatgcagtgaac 557 ||||| |||| ||||||||| || || ||| ||||||| | ||||| ||||| | || Sbjct: 754 gataacatcctttatgctaaggcggttaagttgatgggtgaccgtgtcaatgctgcaaag 813 Query: 558 cttgacttctctgagat 574 ||||| ||||||||||| Sbjct: 814 cttgatttctctgagat 830
>dbj|AB059832.1| Nicotiana tabacum MARBPF mRNA for MAR-binding protein, complete cds Length = 1919 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 348 aagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttgttg 407 ||||| ||||| |||||||| ||||| ||||| ||||| | || || ||| |||||||| Sbjct: 502 aagctaaagtttagccctgacaaggtggatacgatgattgtacaagccattagcttgttg 561 Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 ||||| ||||| || ||||| ||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 562 gatgaccttgataaagagctaaacacatatgccatgagggtccgagaatggtacggttgg 621 Query: 468 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 527 || ||||| ||||| | || ||||| |||||| || | ||||| || ||||||||| Sbjct: 622 cattttccggagcttgcaaagattgtacaagataacattctatatgccaaggctgtgaag 681 Query: 528 atgatgggcaatcgtgttaatgc 550 |||||||| | ||||| ||||| Sbjct: 682 ttgatgggcgaccgtgtaaatgc 704 Score = 91.7 bits (46), Expect = 2e-15 Identities = 169/210 (80%) Strand = Plus / Plus Query: 50 caagtttgaaaatacctccgatgctctttcagctgcaactttgctaattgatagcaagcc 109 ||||||||| || ||||| || ||||| || || || |||||| | || ||||||||||| Sbjct: 204 caagtttgagaacacctcagaagctctgtctgcagctactttgttgatagatagcaagcc 263 Query: 110 cagcaaaggtctgcgcaagttcctgcagaagcactgtgatggtgaaacattggctgttgc 169 ||||||||| |||||||||| || | ||||||||||||||||| |||| ||||| Sbjct: 264 cagcaaaggattgcgcaagtttttgaaagctcactgtgatggtgaaactttgggggttgc 323 Query: 170 cgattctaaacttgggaatgctatcaaagaaaagctgaaaattgattgccttcacaacag 229 ||||| || ||||| ||||| || ||||| || ||| ||||||| || |||| || | Sbjct: 324 tgattcaaagcttggaaatgcaattaaagagaaactgcaaattgactgtgttcataataa 383 Query: 230 tgctgtcatggagctgatgagagggctgag 259 |||||||||||| ||||||||||| |||| Sbjct: 384 tgctgtcatggaattgatgagaggggtgag 413
>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence Length = 146189 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 |||| |||||||||||| ||||||| ||||| ||| | ||||||||||| || ||||| | Sbjct: 126457 aggtggatactatgatcgttcaggctattggtttgcttgatgatcttgataaagagctga 126516 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcc 475 |||| ||||| |||||||| ||||||||||| |||||||| ||||| Sbjct: 126517 acacgtatgccatgagggttcgtgaatggtatggttggcattttcc 126562 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 87 actttgctaattgatagcaagcccagcaaaggtctgcgcaagtt 130 |||||||||||||||||||| | ||||| |||||||||||||| Sbjct: 125054 actttgctaattgatagcaaagctagcaagggtctgcgcaagtt 125097 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 87 actttgctaattgatagcaagcccagcaaaggtctgcgcaagtt 130 ||||||||||||||| | || | ||||| |||||||||||||| Sbjct: 141006 actttgctaattgatcgaaaagctagcaagggtctgcgcaagtt 141049
>gb|AC149637.11| Medicago truncatula clone mth2-181h2, complete sequence Length = 116616 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Minus Query: 370 aggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaaggagctta 429 |||| |||||||||||| ||||||| ||||| ||| | ||||||||||| || ||||| | Sbjct: 115311 aggtggatactatgatcgttcaggctattggtttgcttgatgatcttgataaagagctga 115252 Query: 430 acacttatgctatgagggtccgtgaatggtacggttggcactttcc 475 |||| ||||| |||||||| ||||||||||| |||||||| ||||| Sbjct: 115251 acacgtatgccatgagggttcgtgaatggtatggttggcattttcc 115206 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 87 actttgctaattgatagcaagcccagcaaaggtctgcgcaagtt 130 ||||||||||||||| | || | ||||| |||||||||||||| Sbjct: 100762 actttgctaattgatcgaaaagctagcaagggtctgcgcaagtt 100719
>ref|NM_111378.2| Arabidopsis thaliana DNA binding AT3G05060 mRNA, complete cds Length = 2002 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 150 ggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagctgaaa 209 |||||||| |||||||| || ||||| || |||||||||| |||||| || || |||||| Sbjct: 340 ggtgaaaccttggctgtggctgattcaaagcttgggaatgttatcaaggagaaactgaaa 399 Query: 210 attgattgccttcacaacagtgctgtcatggagct 244 ||||||||| ||||||||| |||||| |||||||| Sbjct: 400 attgattgcattcacaacaatgctgttatggagct 434 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 345 tataagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttg 404 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 535 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 594 Query: 405 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 464 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 595 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 654 Query: 465 tggcactttcccgagct 481 ||||| ||||||||||| Sbjct: 655 tggcattttcccgagct 671
>gb|AY060573.1| Arabidopsis thaliana AT3g05060/T12H1_2 mRNA sequence Length = 1520 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 150 ggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagctgaaa 209 |||||||| |||||||| || ||||| || |||||||||| |||||| || || |||||| Sbjct: 340 ggtgaaaccttggctgtggctgattcaaagcttgggaatgttatcaaggagaaactgaaa 399 Query: 210 attgattgccttcacaacagtgctgtcatggagct 244 ||||||||| ||||||||| |||||| |||||||| Sbjct: 400 attgattgcattcacaacaatgctgttatggagct 434 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 345 tataagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttg 404 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 535 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 594 Query: 405 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 464 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 595 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 654 Query: 465 tggcactttcccgagct 481 ||||| ||||||||||| Sbjct: 655 tggcattttcccgagct 671
>gb|AF412080.1|AF412080 Arabidopsis thaliana AT3g05060/T12H1_2 mRNA, complete cds Length = 1873 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 150 ggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagctgaaa 209 |||||||| |||||||| || ||||| || |||||||||| |||||| || || |||||| Sbjct: 332 ggtgaaaccttggctgtggctgattcaaagcttgggaatgttatcaaggagaaactgaaa 391 Query: 210 attgattgccttcacaacagtgctgtcatggagct 244 ||||||||| ||||||||| |||||| |||||||| Sbjct: 392 attgattgcattcacaacaatgctgttatggagct 426 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 345 tataagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttg 404 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 527 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 586 Query: 405 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 464 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 587 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 646 Query: 465 tggcactttcccgagct 481 ||||| ||||||||||| Sbjct: 647 tggcattttcccgagct 663
>gb|AF302491.1|AF302491 Arabidopsis thaliana NOP58-like protein mRNA, complete cds Length = 1602 Score = 93.7 bits (47), Expect = 6e-16 Identities = 83/95 (87%) Strand = Plus / Plus Query: 150 ggtgaaacattggctgttgccgattctaaacttgggaatgctatcaaagaaaagctgaaa 209 |||||||| |||||||| || ||||| || |||||||||| |||||| || || |||||| Sbjct: 247 ggtgaaaccttggctgtggctgattcaaagcttgggaatgttatcaaggagaaactgaaa 306 Query: 210 attgattgccttcacaacagtgctgtcatggagct 244 ||||||||| ||||||||| |||||| |||||||| Sbjct: 307 attgattgcattcacaacaatgctgttatggagct 341 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 345 tataagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttg 404 |||||||| ||||| || |||| ||||| ||||| ||||| || || || ||||| || Sbjct: 442 tataagctaaagtttagttctgacaaggtggataccatgattatccaagctattggtctg 501 Query: 405 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 464 | |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || Sbjct: 502 cttgatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatgga 561 Query: 465 tggcactttcccgagct 481 ||||| ||||||||||| Sbjct: 562 tggcattttcccgagct 578
>gb|AF007271.1|TM021B04 Arabidopsis thaliana BAC TM021B04 Length = 90019 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 |||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||| Sbjct: 80028 gatgatcttgacaaagagcttaacacttacgctatgagggttcgtgaatggtttggttgg 79969 Query: 468 cactttcccgagct 481 || ||||| ||||| Sbjct: 79968 cattttcctgagct 79955 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 220 ttcacaacagtgctgtcatggagctgatgagagggctgaggaaccagcttactgaactta 279 ||||||||| |||||| ||||||||| | ||||| | || | |||||| |||||||||| Sbjct: 80410 ttcacaacaatgctgttatggagctgttaagaggtatcagaagccagctaactgaactta 80351 Query: 280 tgtctggactagctgaacatgatctaggtccaatgagcctaggattgtcccacagc 335 | |||||| | | ||| || |||||||||||||||||| | || ||||| |||||| Sbjct: 80350 tatctggattgggtgatcaagatctaggtccaatgagcttggggttgtctcacagc 80295 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 |||||||||||||| |||||||||||||| ||| ||| || |||||| |||||||| | Sbjct: 73003 gatgatcttgacaaagagcttaacacttacactacgagcgtttgtgaattgtacggtttg 72944 Query: 468 cactttcccgagct 481 || ||||||||||| Sbjct: 72943 cattttcccgagct 72930 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 142 actgtgatggtgaaacattggctgttgccgattctaaacttgg 184 |||||| |||||||||||| |||||||| |||||||| ||||| Sbjct: 80564 actgtgttggtgaaacattagctgttgctgattctaagcttgg 80522
>ref|NM_122596.1| Arabidopsis thaliana DNA binding AT5G27140 mRNA, complete cds Length = 1338 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 |||||||||||||| |||||||||||||| ||| ||| || |||||| |||||||| | Sbjct: 412 gatgatcttgacaaagagcttaacacttacactacgagcgtttgtgaattgtacggtttg 471 Query: 468 cactttcccgagct 481 || ||||||||||| Sbjct: 472 cattttcccgagct 485
>emb|AJ580824.1|LCO580824 Lotus corniculatus var. japonicus har1 gene and genes for transcription factor homolog BTF3-like protein, S-receptor kinase-like protein 1, S-receptor kinase-like protein 2, S-receptor kinase-like protein 3 and SAR DNA-binding protein-like protein Length = 46304 Score = 61.9 bits (31), Expect = 2e-06 Identities = 115/143 (80%) Strand = Plus / Minus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 ||||||||||| |||||| | || || || || |||||||| || |||||||| |||||| Sbjct: 41646 gatgatcttgataaggagttgaatacatacgccatgagggttcgagaatggtatggttgg 41587 Query: 468 cactttcccgagctcacgaaaattgttgcagataatatccattatgctaaagctgtgaag 527 || ||||| ||||| || ||||| || ||||| ||||| |||||||| || || || Sbjct: 41586 cattttccagagcttaccaaaatcattcaggataacatccaatatgctaaggcagtcaaa 41527 Query: 528 atgatgggcaatcgtgttaatgc 550 ||||||| ||||||||||||| Sbjct: 41526 ttgatgggtgatcgtgttaatgc 41504 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagctgatgagaggg 254 |||||||||||| ||||||||| |||||| |||||| ||||||||||| Sbjct: 42576 gaaaattgattgtgttcacaacaatgctgttatggagttgatgagaggg 42528
>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence, complete sequence Length = 140064 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 |||||||||||||| ||||| ||||| || || |||||||| | |||||||| || ||| Sbjct: 10594 gatgatcttgacaaagagctgaacacatacgccatgagggttagagaatggtatggatgg 10535 Query: 468 cactttcccgagct 481 || ||||||||||| Sbjct: 10534 cattttcccgagct 10521 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 206 gaaaattgattgccttcacaacagtgctgtcatggagct 244 ||||||||||||| ||||||||| |||||| |||||||| Sbjct: 11002 gaaaattgattgcattcacaacaatgctgttatggagct 10964 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 agcaaaggtctgcgcaagtt 130 |||||||||||||||||||| Sbjct: 11177 agcaaaggtctgcgcaagtt 11158
>ref|XM_370511.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG07008.4) partial mRNA Length = 1878 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 405 ttggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggt 464 ||||||||||||||||||||||| ||||| || |||||| | ||| || |||||||| Sbjct: 520 ttggatgatcttgacaaggagctgaacacgtacgctatgcgcgtcaaggagtggtacggc 579 Query: 465 tggcactttcccgagct 481 |||||||| || ||||| Sbjct: 580 tggcacttccctgagct 596
>ref|XM_421942.1| PREDICTED: Gallus gallus similar to Nucleolar protein NOP5 (Nucleolar protein 5) (NOP58) (HSPC120) (LOC424087), mRNA Length = 1947 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 453 gaatggtacggttggcactttcccgagct 481 ||||||||||||||||||||||||||||| Sbjct: 635 gaatggtacggttggcactttcccgagct 663
>ref|XM_968327.1| PREDICTED: Tribolium castaneum similar to CG10206-PA (LOC662214), mRNA Length = 1766 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 453 gaatggtacggttggcactttcccgagct 481 ||||||||||||||||||||||||||||| Sbjct: 651 gaatggtacggttggcactttcccgagct 679
>gb|AY950659.1| Euglena gracilis Nop58p mRNA, partial cds Length = 1232 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggt 448 |||||| | ||||||||||| |||||||||||||||||||| Sbjct: 458 gatgatttggacaaggagctcaacacttatgctatgagggt 498
>emb|BX935105.1| Gallus gallus finished cDNA, clone ChEST73m23 Length = 1953 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 453 gaatggtacggttggcactttcccgagct 481 ||||||||||||||||||||||||||||| Sbjct: 636 gaatggtacggttggcactttcccgagct 664
>gb|AF061963.1|AF061963 Pisum sativum SAR DNA-binding protein (SARBP-2) mRNA, complete cds Length = 1953 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 364 ctgaaaaggttgatactatgatcattcaggcaattggcttgttggatgatcttgacaagg 423 |||| ||||| |||||||||||| | || || ||||| || | ||||||||||| || | Sbjct: 579 ctgacaaggtggatactatgatcgtccaagctattggtttactcgatgatcttgataaag 638 Query: 424 agcttaacacttatgctatgagggtccgtgaatggtacggttggcactttcc 475 | || ||||| ||||| ||||| || ||||| ||||| |||||||| ||||| Sbjct: 639 aactgaacacctatgccatgagagttcgtgagtggtatggttggcattttcc 690
>gb|AF061962.1|AF061962 Pisum sativum SAR DNA-binding protein (SARBP-1) mRNA, complete cds Length = 1952 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 ||||||||||| || ||| | || || ||||| ||||||||||| |||||||| |||||| Sbjct: 524 gatgatcttgataaagagttgaatacgtatgccatgagggtccgagaatggtatggttgg 583 Query: 468 cactttcc 475 || ||||| Sbjct: 584 cattttcc 591 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 agcaaaggtctgcgcaagttcctgc 135 ||||| ||||||||||||||||||| Sbjct: 227 agcaagggtctgcgcaagttcctgc 251
>ref|XM_815190.1| Trypanosoma cruzi strain CL Brener nucleolar RNA binding protein (Tc00.1047053508277.230) partial mRNA Length = 1491 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 411 gatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcac 470 ||||||||||||||| |||||| || || ||| ||| ||| || |||||||| ||||| Sbjct: 643 gatcttgacaaggagattaacaaatacgcgatgcgggcccgagagtggtacggatggcat 702 Query: 471 tttcccgagct 481 ||||||||||| Sbjct: 703 tttcccgagct 713
>ref|XM_757287.1| Ustilago maydis 521 hypothetical protein (UM06233.1) partial mRNA Length = 1572 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 381 atgatcattcaggcaattggcttgttggatgatcttgacaaggagcttaacacttatgct 440 |||||||||||||| |||| ||| | || |||||||||||| ||||||||| | | Sbjct: 508 atgatcattcaggcgattgctttgctcgacactcttgacaaggacgttaacactttttcc 567 Query: 441 atgagggtccgtgaatggtacggttggcactttcccga 478 ||| | || || ||||||||||| |||||||||||||| Sbjct: 568 atgcgtgttcgcgaatggtacggctggcactttcccga 605
>ref|NM_058064.3| Drosophila melanogaster nop5 CG10206-RA (nop5), mRNA Length = 1815 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 689 tggtacggttggcactttcccgagct 714
>gb|AY061401.1| Drosophila melanogaster LD32943 full length cDNA Length = 1810 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 669 tggtacggttggcactttcccgagct 694
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone BACR20B21, complete sequence Length = 166512 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 54771 tggtacggttggcactttcccgagct 54796
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 24915 tggtacggttggcactttcccgagct 24890
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete sequence Length = 270751 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 161409 tggtacggttggcactttcccgagct 161384
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete sequence Length = 82849 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 12847 tggtacggttggcactttcccgagct 12872
>emb|AJ249465.1|DME249465 Drosophila melanogaster mRNA for DNop5 protein (Dnop5 gene) Length = 1817 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||||||||| Sbjct: 677 tggtacggttggcactttcccgagct 702
>ref|XM_753615.1| Ustilago maydis 521 hypothetical protein (UM02561.1) partial mRNA Length = 1749 Score = 48.1 bits (24), Expect = 0.032 Identities = 105/132 (79%) Strand = Plus / Plus Query: 348 aagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttgttg 407 ||||| ||||| |||||||| ||||| || || ||| || | || || |||||| || | Sbjct: 481 aagctcaagtttagccctgacaaggtcgacaccatggtcgtacaagcgattggcctgctc 540 Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 || || || ||||||||| | |||| |||||||||| | ||| ||||||||||| ||| Sbjct: 541 gacgacctcgacaaggagatcaacatttatgctatgcgtgtcaaggaatggtacggctgg 600 Query: 468 cactttcccgag 479 ||||| |||||| Sbjct: 601 cacttccccgag 612
>ref|XM_368011.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07915.4) partial mRNA Length = 1545 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 453 gaatggtacggttggcactttcccgagctca 483 ||||||||||| |||||||| |||||||||| Sbjct: 598 gaatggtacggctggcacttccccgagctca 628
>gb|AC138737.10| Mus musculus chromosome 5, clone RP23-307F20, complete sequence Length = 216064 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 178 aacttgggaatgctatcaaagaa 200 ||||||||||||||||||||||| Sbjct: 182188 aacttgggaatgctatcaaagaa 182210
>ref|XM_749189.1| Aspergillus fumigatus Af293 nucleolar protein nop5 (Afu3g13400) partial mRNA Length = 1776 Score = 46.1 bits (23), Expect = 0.13 Identities = 107/135 (79%) Strand = Plus / Plus Query: 348 aagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttgttg 407 |||||||||||| ||| || ||| | ||||||||||| | || || ||||| ||| || Sbjct: 457 aagctgaagttctcccccgataagatcgatactatgattgtgcaagctattggtttgctg 516 Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 ||||| || ||||||||||| ||||| || || ||| | || ||||||||||| ||| Sbjct: 517 gatgacctggacaaggagctcaacacctacgccatgcgtgtgaaggaatggtacggctgg 576 Query: 468 cactttcccgagctc 482 || || ||||||||| Sbjct: 577 catttccccgagctc 591
>ref|NM_058733.3| Caenorhabditis elegans W01B11.3 (W01B11.3) mRNA, complete cds Length = 1788 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Plus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 |||||||||||||||||| | |||| |||| |||| | ||| | ||||||||||| ||| Sbjct: 510 gatgatcttgacaaggagttgaacaactatgttatgcgtgtcagagaatggtacggatgg 569 Query: 468 cactttcccgagctc 482 || || || |||||| Sbjct: 570 catttcccagagctc 584
>gb|DQ124215.2| Dunaliella salina MAR-binding protein mRNA, complete cds Length = 2232 Score = 46.1 bits (23), Expect = 0.13 Identities = 113/143 (79%) Strand = Plus / Plus Query: 330 cacagcttgtctaggtataagctgaagttcagccctgaaaaggttgatactatgatcatt 389 ||||||||||| | || ||||| ||||||||||| || ||||| || || ||||| | Sbjct: 532 cacagcttgtcgcgatacaagctcaagttcagcccagacaaggtcgacaccatgattgtg 591 Query: 390 caggcaattggcttgttggatgatcttgacaaggagcttaacacttatgctatgagggtc 449 || || ||||| || |||| || || ||||||||||| ||||| ||||| ||| | || Sbjct: 592 caagccattgggctgctggacgacctggacaaggagctgaacacgtatgccatgcgtgtg 651 Query: 450 cgtgaatggtacggttggcactt 472 ||||| ||||| || |||||||| Sbjct: 652 cgtgagtggtatggctggcactt 674
>gb|AF043704.1| Caenorhabditis elegans cosmid W01B11, complete sequence Length = 36999 Score = 46.1 bits (23), Expect = 0.13 Identities = 62/75 (82%) Strand = Plus / Plus Query: 408 gatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttgg 467 |||||||||||||||||| | |||| |||| |||| | ||| | ||||||||||| ||| Sbjct: 1904 gatgatcttgacaaggagttgaacaactatgttatgcgtgtcagagaatggtacggatgg 1963 Query: 468 cactttcccgagctc 482 || || || |||||| Sbjct: 1964 catttcccagagctc 1978
>gb|AC116783.7| Mus musculus chromosome 5, clone RP24-145D9, complete sequence Length = 168285 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 178 aacttgggaatgctatcaaagaa 200 ||||||||||||||||||||||| Sbjct: 123850 aacttgggaatgctatcaaagaa 123828
>gb|AY423035.1| Danio rerio nucleolar protein 5A (NOL5A) mRNA, complete cds Length = 1610 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 450 cgtgaatggtacggttggcactttcccgagctca 483 |||||||||||||||| |||||||| ||||||| Sbjct: 638 cgtgaatggtacggttaccactttccagagctca 671
>gb|AY648814.1| Danio rerio NOP56 mRNA, complete cds Length = 2018 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 450 cgtgaatggtacggttggcactttcccgagctca 483 |||||||||||||||| |||||||| ||||||| Sbjct: 617 cgtgaatggtacggttaccactttccagagctca 650
>gb|BC075769.1| Danio rerio nucleolar protein 5A, mRNA (cDNA clone IMAGE:6900431), partial cds Length = 1388 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 450 cgtgaatggtacggttggcactttcccgagctca 483 |||||||||||||||| |||||||| ||||||| Sbjct: 609 cgtgaatggtacggttaccactttccagagctca 642
>ref|XM_322653.1| Neurospora crassa OR74A hypothetical protein (NCU03396.1) partial mRNA Length = 1794 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 414 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 473 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 523 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 582 Query: 474 cccgag 479 |||||| Sbjct: 583 cccgag 588
>ref|XM_951750.1| Neurospora crassa OR74A hypothetical protein (NCU03396.1) partial mRNA Length = 1794 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 414 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 473 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 523 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 582 Query: 474 cccgag 479 |||||| Sbjct: 583 cccgag 588
>gb|BC056732.1| Danio rerio nucleolar protein 5A, mRNA (cDNA clone IMAGE:6795155), partial cds Length = 1478 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 450 cgtgaatggtacggttggcactttcccgagctca 483 |||||||||||||||| |||||||| ||||||| Sbjct: 604 cgtgaatggtacggttaccactttccagagctca 637
>emb|CR762383.11| Zebrafish DNA sequence from clone DKEY-28M7 in linkage group 6, complete sequence Length = 101572 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 acctccgatgctctttcagctgcaac 88 ||||| |||||||||||||||||||| Sbjct: 94974 acctcggatgctctttcagctgcaac 94999
>ref|XM_947073.1| Theileria annulata strain Ankara nucleolar protein Nop5 (TA13805) partial mRNA Length = 1491 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcccgagct 481 |||||||||||||||||||| ||||| Sbjct: 565 tggtacggttggcactttccagagct 590
>gb|AF495927.1| Drosophila melanogaster strain Kenia13 CG3592 (CG3592) gene, partial cds Length = 937 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 tgaaaattgattgccttcacaa 226 |||||||||||||||||||||| Sbjct: 639 tgaaaattgattgccttcacaa 660
>emb|AL669992.1|NCB19C19 Neurospora crassa DNA linkage group II BAC clone B19C19 Length = 61082 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 414 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 473 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 13989 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 14048 Query: 474 cccgag 479 |||||| Sbjct: 14049 cccgag 14054
>ref|NM_201217.1| Danio rerio nucleolar protein 5A (nol5a), mRNA Length = 1610 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 450 cgtgaatggtacggttggcactttcccgagctca 483 |||||||||||||||| |||||||| ||||||| Sbjct: 638 cgtgaatggtacggttaccactttccagagctca 671
>gb|U36470.1|NCU36470 Neurospora crassa vacuolar ATPase 41 kDa subunit (vma6) gene, ribosome-associated protein (rap-1) gene, complete cds Length = 6119 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Minus Query: 414 cttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggttggcacttt 473 |||||||||||||| ||||| || || ||| | ||| ||||||||||| |||||||| Sbjct: 78 cttgacaaggagctcaacacctacgccatgcgtgtcaaggaatggtacggctggcacttc 19 Query: 474 cccgag 479 |||||| Sbjct: 18 cccgag 13
>gb|BC079930.1| Xenopus tropicalis MGC79534 protein, mRNA (cDNA clone MGC:79534 IMAGE:6977964), complete cds Length = 2290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 agttcagccctgaaaaggttg 375 ||||||||||||||||||||| Sbjct: 1050 agttcagccctgaaaaggttg 1070
>ref|XM_422262.1| PREDICTED: Gallus gallus similar to AF464140 (LOC424419), mRNA Length = 1545 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 cgcaagttcctgcagaagcac 143 ||||||||||||||||||||| Sbjct: 950 cgcaagttcctgcagaagcac 970
>gb|AC114634.14| Mus musculus chromosome 8, clone RP24-116E2, complete sequence Length = 198670 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 ctaaacttgggaatgctatcaaaga 199 |||||||||||||| |||||||||| Sbjct: 180665 ctaaacttgggaattctatcaaaga 180689
>gb|AC091320.5| Homo sapiens BAC clone RP11-447A2 from 7, complete sequence Length = 179728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 tgtcatggagctgatgagagg 253 ||||||||||||||||||||| Sbjct: 89924 tgtcatggagctgatgagagg 89944
>gb|AC087289.9| Homo sapiens chromosome 17, clone RP11-552F3, complete sequence Length = 203765 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 246 atgagagggctgaggaaccagctta 270 |||||||||||||| |||||||||| Sbjct: 27621 atgagagggctgagaaaccagctta 27597
>emb|CR381641.12| Zebrafish DNA sequence from clone DKEY-189N10 in linkage group 7, complete sequence Length = 168455 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaact 89 ||||||||||||||||||||| Sbjct: 85880 gatgctctttcagctgcaact 85860
>emb|CR361558.6| Zebrafish DNA sequence from clone DKEY-22K11 in linkage group 13, complete sequence Length = 204631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaact 89 ||||||||||||||||||||| Sbjct: 27250 gatgctctttcagctgcaact 27230
>emb|BX323448.7| Zebrafish DNA sequence from clone CH211-145B13 in linkage group 1, complete sequence Length = 150073 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaact 89 ||||||||||||||||||||| Sbjct: 2297 gatgctctttcagctgcaact 2277
>ref|NM_001007493.1| Xenopus tropicalis MGC79534 protein (MGC79534), mRNA Length = 2290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 agttcagccctgaaaaggttg 375 ||||||||||||||||||||| Sbjct: 1050 agttcagccctgaaaaggttg 1070
>emb|BX119923.12| Zebrafish DNA sequence from clone CH211-203B17 in linkage group 23, complete sequence Length = 159232 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cgatgctctttcagctgcaac 88 ||||||||||||||||||||| Sbjct: 4644 cgatgctctttcagctgcaac 4664
>gb|AC140272.3| Mus musculus BAC clone RP23-332G6 from 8, complete sequence Length = 228667 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 ctaaacttgggaatgctatcaaaga 199 |||||||||||||| |||||||||| Sbjct: 29787 ctaaacttgggaattctatcaaaga 29811
>emb|BX649263.6| Zebrafish DNA sequence from clone DKEY-21O22 in linkage group 4, complete sequence Length = 143254 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaact 89 ||||||||||||||||||||| Sbjct: 121703 gatgctctttcagctgcaact 121683
>emb|CT573507.2| Medicago truncatula chromosome 5 clone mth2-72p17, COMPLETE SEQUENCE Length = 109575 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 agcaaaggtctgcgcaagttcctgc 135 ||||| ||||||||||||||||||| Sbjct: 31295 agcaagggtctgcgcaagttcctgc 31319 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 agcaaaggtctgcgcaagttcctgc 135 ||||||||||||||||| ||||||| Sbjct: 25349 agcaaaggtctgcgcaaattcctgc 25373
>emb|CR762290.2| Xenopus tropicalis finished cDNA, clone TGas091m21 Length = 2230 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 355 agttcagccctgaaaaggttg 375 ||||||||||||||||||||| Sbjct: 1007 agttcagccctgaaaaggttg 1027
>gb|AC006115.1|AC006115 Homo sapiens chromosome 19, BAC CIT-B-470f8 (BC330812), complete sequence Length = 178367 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 aagaaaagctgaaaattgatt 216 ||||||||||||||||||||| Sbjct: 54583 aagaaaagctgaaaattgatt 54563
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gaaaatacctccgatgctctttca 80 ||||||||||| |||||||||||| Sbjct: 1043543 gaaaatacctctgatgctctttca 1043520
>emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in linkage group 14, complete sequence Length = 145610 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 89076 gatgctctttcagctgcaac 89095
>ref|XM_752874.1| Ustilago maydis 521 hypothetical protein (UM01820.1) partial mRNA Length = 723 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cttcacaacagtgctgtcat 238 |||||||||||||||||||| Sbjct: 126 cttcacaacagtgctgtcat 107
>emb|CR855325.15| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5, complete sequence Length = 198456 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 43462 gatgctctttcagctgcaac 43443
>emb|CR382370.13| Zebrafish DNA sequence from clone DKEY-22O12 in linkage group 1, complete sequence Length = 257504 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 10555 gatgctctttcagctgcaac 10574
>ref|XM_818224.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.26.0960) partial mRNA Length = 4917 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4866 gcaagttcctgcagaagcac 4885 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4779 gcaagttcctgcagaagcac 4798 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4680 gcaagttcctgcagaagcac 4699 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4581 gcaagttcctgcagaagcac 4600 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4482 gcaagttcctgcagaagcac 4501 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4398 gcaagttcctgcagaagcac 4417 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4299 gcaagttcctgcagaagcac 4318 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4200 gcaagttcctgcagaagcac 4219 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4116 gcaagttcctgcagaagcac 4135 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 4017 gcaagttcctgcagaagcac 4036 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 3918 gcaagttcctgcagaagcac 3937 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 3834 gcaagttcctgcagaagcac 3853 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 3735 gcaagttcctgcagaagcac 3754 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 3636 gcaagttcctgcagaagcac 3655 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 3552 gcaagttcctgcagaagcac 3571
>emb|BX957359.10| Zebrafish DNA sequence from clone DKEY-234E8 in linkage group 7, complete sequence Length = 180396 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 89196 gatgctctttcagctgcaac 89215
>emb|CR589948.8| Zebrafish DNA sequence from clone CH211-160P12 in linkage group 15, complete sequence Length = 162791 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 64106 gatgctctttcagctgcaac 64087
>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence Length = 253013 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gattgccttcacaacagtgc 232 |||||||||||||||||||| Sbjct: 246744 gattgccttcacaacagtgc 246725
>ref|XM_444941.1| Candida glabrata CBS138 hypothetical protein (CAGL0A04015g) partial mRNA Length = 1527 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 gaatggtacggttggcactt 472 |||||||||||||||||||| Sbjct: 583 gaatggtacggttggcactt 602
>emb|BX957288.10| Zebrafish DNA sequence from clone DKEY-146P4 in linkage group 12, complete sequence Length = 172591 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 128596 gatgctctttcagctgcaac 128615
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 gcagtgaaccttgacttctc 568 |||||||||||||||||||| Sbjct: 78934 gcagtgaaccttgacttctc 78953
>emb|BX664703.21| Zebrafish DNA sequence from clone DKEYP-74A8 in linkage group 6, complete sequence Length = 193958 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 6051 gatgctctttcagctgcaac 6070
>emb|CR790378.10| Zebrafish DNA sequence from clone DKEY-112E17 in linkage group 5, complete sequence Length = 160791 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 52856 gatgctctttcagctgcaac 52837
>emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in linkage group 9, complete sequence Length = 221511 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 205594 gatgctctttcagctgcaac 205613
>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5, complete sequence Length = 190731 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 32984 gatgctctttcagctgcaac 32965
>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14, complete sequence Length = 160671 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 53057 gatgctctttcagctgcaac 53038
>emb|CR391935.9| Zebrafish DNA sequence from clone DKEY-256K13 in linkage group 23, complete sequence Length = 197191 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 61977 gatgctctttcagctgcaac 61996
>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16, complete sequence Length = 91165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 21104 gatgctctttcagctgcaac 21123
>emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in linkage group 2, complete sequence Length = 206746 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 87945 gatgctctttcagctgcaac 87926
>emb|AL359962.15| Human DNA sequence from clone RP11-104L21 on chromosome 1q23.3-25.1 Contains the 3' end of the POU2F1 gene for POU domain class 2 transcription factor 1, the 3' end of the CD3Z gene for CD3Z antigen zeta polypeptide (TiT3 complex) and two CpG islands, complete sequence Length = 67173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ctgaagttcagccctgaaaa 370 |||||||||||||||||||| Sbjct: 25164 ctgaagttcagccctgaaaa 25145
>emb|CR381637.5| Zebrafish DNA sequence from clone DKEY-225P19 in linkage group 21, complete sequence Length = 171229 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 77222 gatgctctttcagctgcaac 77241
>ref|XM_788485.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleolar protein 5 (LOC588821), mRNA Length = 963 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 342 aggtataagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaat 397 ||||| ||| ||||||||||||| || || || ||||| ||||| |||||||||| Sbjct: 16 aggtacaagttgaagttcagccccgacaaagtggataccatgattgttcaggcaat 71
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 gaatggtacggttggcactt 472 |||||||||||||||||||| Sbjct: 398322 gaatggtacggttggcactt 398303
>emb|AL732488.7| Zebrafish DNA sequence from clone RP71-1C10 in linkage group 12 Contains part of a novel ring finger gene, a novel zinc finger pseudogene, a novel zinc finger gene and a novel gene similar to valop (vertebrate ancient long opsin), complete sequence Length = 165151 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 138374 gatgctctttcagctgcaac 138355
>emb|AL772295.5| Zebrafish DNA sequence from clone CH211-14A17 in linkage group 2 Contains a novel gene for a protein similar to apoptotic chromatin condensation inducer in the nucleus (ACINUS), two novel genes, a novel gene for a protein with a short chain dehydrogenase domain, a novel homeodomain gene, two novel genes for proteins with a zona pellucida-like domain, a novel ubiquitin-like gene, a novel gene similar to AP1G2 (adaptor-related protein complex 1, gamma 2 subunit), a novel gene similar to SLC7A8 (solute carrier family 7 (cationic amino acid transporter, y+ system), member 8), a novel gene similar to human and mouse SKB1 homolog (S. pombe), a gene for a novel proteasome, the psmb5 gene for proteasome (prosome, macropain) subunit, beta type, 5 and two CpG islands, complete sequence Length = 194351 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 61882 gatgctctttcagctgcaac 61863
>emb|CR293512.7| Zebrafish DNA sequence from clone DKEY-27M20 in linkage group 23, complete sequence Length = 127255 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 119858 gatgctctttcagctgcaac 119877
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 59768 gatgctctttcagctgcaac 59749
>emb|CR788251.13| Zebrafish DNA sequence from clone DKEY-231F24 in linkage group 13, complete sequence Length = 150523 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 79316 gatgctctttcagctgcaac 79335
>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete sequence Length = 156095 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 19350 gatgctctttcagctgcaac 19331
>emb|BX901894.23| Zebrafish DNA sequence from clone DKEY-71L4 in linkage group 4, complete sequence Length = 157981 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 65507 gatgctctttcagctgcaac 65526
>emb|CR847930.5| Zebrafish DNA sequence from clone DKEY-148H19 in linkage group 19, complete sequence Length = 167262 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 78666 gatgctctttcagctgcaac 78685
>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3, complete sequence Length = 198900 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 69446 gatgctctttcagctgcaac 69427
>emb|AL929155.4| Zebrafish DNA sequence from clone DKEY-265M8 in linkage group 7 Contains a novel gene similar to mouse and human MRPL46 (mitochondrial ribosomal protein L46), a novel gene similar to mouse and human MRPS11 (mitochondrial ribosomal protein S11) and four CpG islands, complete sequence Length = 173326 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 42748 gatgctctttcagctgcaac 42767
>emb|BX927130.13| Zebrafish DNA sequence from clone DKEY-27N6 in linkage group 20 Contains seven novel genes and two CpG islands, complete sequence Length = 186518 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 58115 gatgctctttcagctgcaac 58096
>emb|AL606703.6| Zebrafish DNA sequence from clone BUSM1-181A10 in linkage group 14 Contains the 5' part of the robo2 gene for roundabout homolog 2 and two CpG islands, complete sequence Length = 76265 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 23059 gatgctctttcagctgcaac 23040
>emb|CR846096.4| Zebrafish DNA sequence from clone DKEYP-8C10 in linkage group 14, complete sequence Length = 91350 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 81448 gatgctctttcagctgcaac 81429
>emb|BX545915.7| Zebrafish DNA sequence from clone DKEY-41B16 in linkage group 3, complete sequence Length = 192468 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 94181 gatgctctttcagctgcaac 94162
>emb|CR524483.7| Zebrafish DNA sequence from clone DKEY-151P21 in linkage group 15, complete sequence Length = 210342 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 58828 gatgctctttcagctgcaac 58809
>gb|AC151263.3| Mus musculus BAC clone RP24-464I20 from chromosome 17, complete sequence Length = 182799 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 gattgccttcacaacagtgc 232 |||||||||||||||||||| Sbjct: 145285 gattgccttcacaacagtgc 145266
>emb|BX663533.7| Zebrafish DNA sequence from clone DKEY-85A11 in linkage group 23, complete sequence Length = 33191 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 29663 gatgctctttcagctgcaac 29682
>emb|CR384085.5| Zebrafish DNA sequence from clone CH211-267K7 in linkage group 5, complete sequence Length = 140947 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 131218 gatgctctttcagctgcaac 131237
>emb|BX510348.6| Zebrafish DNA sequence from clone CH211-157E20 in linkage group 6, complete sequence Length = 169275 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 139363 gatgctctttcagctgcaac 139382
>emb|BX276108.6| Zebrafish DNA sequence from clone CH211-265M17 in linkage group 24, complete sequence Length = 144165 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 15023 gatgctctttcagctgcaac 15004
>emb|BX323012.5| Zebrafish DNA sequence from clone DKEYP-46F3, complete sequence Length = 175238 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 31667 gatgctctttcagctgcaac 31686
>emb|BX530071.7| Zebrafish DNA sequence from clone CH211-189P14 in linkage group 10, complete sequence Length = 148539 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 87350 gatgctctttcagctgcaac 87369
>emb|BX640535.7| Zebrafish DNA sequence from clone DKEY-85K22 in linkage group 5, complete sequence Length = 154676 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 15002 gatgctctttcagctgcaac 14983
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 7.8 Identities = 107/136 (78%) Strand = Plus / Minus Query: 346 ataagctgaagttcagccctgaaaaggttgatactatgatcattcaggcaattggcttgt 405 |||||||||||||| || || ||| ||||||||||||| | || || ||||| || Sbjct: 2046048 ataagctgaagttctctcccgataagattgatactatgattgtacaagccattggtctgc 2045989 Query: 406 tggatgatcttgacaaggagcttaacacttatgctatgagggtccgtgaatggtacggtt 465 |||||||| | || |||||||| |||| ||||||||| | || ||||||||||| | Sbjct: 2045988 tggatgatttggataaggagctcaacaactatgctatgcgtgtgaaggaatggtacggct 2045929 Query: 466 ggcactttcccgagct 481 ||||||| || ||||| Sbjct: 2045928 ggcacttccctgagct 2045913
>emb|BX323865.6| Zebrafish DNA sequence from clone CH211-134N22 in linkage group 14, complete sequence Length = 75932 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 52750 gatgctctttcagctgcaac 52731
>emb|BX511312.6| Zebrafish DNA sequence from clone DKEY-76K14 in linkage group 15, complete sequence Length = 40687 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 19078 gatgctctttcagctgcaac 19059
>emb|BX546494.9| Zebrafish DNA sequence from clone DKEYP-118A3 in linkage group 1, complete sequence Length = 174501 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 96256 gatgctctttcagctgcaac 96237
>gb|AC008704.6| Homo sapiens chromosome 5 clone CTB-77C3, complete sequence Length = 95906 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ctatcaaagaaaagctgaaaattg 213 |||||||||||||| ||||||||| Sbjct: 50700 ctatcaaagaaaaggtgaaaattg 50723
>emb|BX255951.13| Zebrafish DNA sequence from clone DKEYP-31E5 in linkage group 5, complete sequence Length = 171425 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 153883 gatgctctttcagctgcaac 153864
>gb|DQ072717.1| Homo sapiens CD3Z antigen, zeta polypeptide (TiT3 complex) (CD3Z) gene, complete cds Length = 90859 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 ctgaagttcagccctgaaaa 370 |||||||||||||||||||| Sbjct: 77261 ctgaagttcagccctgaaaa 77280
>emb|BX548047.12| Zebrafish DNA sequence from clone CH211-77G15 in linkage group 2, complete sequence Length = 179092 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 15258 gatgctctttcagctgcaac 15277
>emb|BX324001.6| Zebrafish DNA sequence from clone CH211-209D21 in linkage group 2, complete sequence Length = 147684 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 131970 gatgctctttcagctgcaac 131989
>emb|BX323984.7| Zebrafish DNA sequence from clone CH211-157H5 in linkage group 1, complete sequence Length = 177080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 43803 gatgctctttcagctgcaac 43822
>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20, complete sequence Length = 151560 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 47643 gatgctctttcagctgcaac 47624
>emb|BX005006.10| Zebrafish DNA sequence from clone DKEY-47K14, complete sequence Length = 232594 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 30974 gatgctctttcagctgcaac 30955
>emb|BX005282.24| Zebrafish DNA sequence from clone DKEY-37M22 in linkage group 11, complete sequence Length = 153270 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 49925 gatgctctttcagctgcaac 49944
>emb|BX294369.6| Zebrafish DNA sequence from clone CH211-223H7 in linkage group 17, complete sequence Length = 111212 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 29602 gatgctctttcagctgcaac 29621
>emb|BX322787.5| Zebrafish DNA sequence from clone CH211-198H5 in linkage group 7, complete sequence Length = 92049 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 87187 gatgctctttcagctgcaac 87206
>emb|BX005392.12| Zebrafish DNA sequence from clone DKEY-117J14 in linkage group 24, complete sequence Length = 178765 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 atgctctttcagctgcaact 89 |||||||||||||||||||| Sbjct: 120657 atgctctttcagctgcaact 120676
>gb|AF196567.2| Pseudomonas stutzeri pdt locus, partial sequence Length = 25746 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cagtgctgtcatggagctga 246 |||||||||||||||||||| Sbjct: 23702 cagtgctgtcatggagctga 23721
>gb|AC090962.33| Mus musculus strain C57BL/6J chromosome 14 clone rp23-124m15, complete sequence Length = 171568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 tatcaaagaaaagctgaaaa 210 |||||||||||||||||||| Sbjct: 47027 tatcaaagaaaagctgaaaa 47008
>gb|AC092418.3| Homo sapiens chromosome 3 clone RP11-229A12, complete sequence Length = 164500 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 515 taaagctgtgaagatgatgg 534 |||||||||||||||||||| Sbjct: 143756 taaagctgtgaagatgatgg 143775
>gb|AF203894.1| Laurencia filiformis small subunit ribosomal RNA gene, complete sequence Length = 1766 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tggtacggttggcactttcc 475 |||||||||||||||||||| Sbjct: 1031 tggtacggttggcactttcc 1050
>emb|BX001055.11| Zebrafish DNA sequence from clone CH211-87M5 in linkage group 9, complete sequence Length = 194418 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 105473 gatgctctttcagctgcaac 105454
>emb|BX004790.9| Zebrafish DNA sequence from clone CH211-215J7 in linkage group 7, complete sequence Length = 209666 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 201410 gatgctctttcagctgcaac 201429
>emb|BX640580.3| Zebrafish DNA sequence from clone CH211-278A6 in linkage group 3, complete sequence Length = 184594 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 169047 gatgctctttcagctgcaac 169028
>emb|BX005082.7| Zebrafish DNA sequence from clone DKEY-148A17 in linkage group 7, complete sequence Length = 151799 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 54791 gatgctctttcagctgcaac 54810
>emb|BX004770.12| Zebrafish DNA sequence from clone DKEY-14K21 in linkage group 10, complete sequence Length = 231131 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 61200 gatgctctttcagctgcaac 61181
>emb|BX571798.5| Zebrafish DNA sequence from clone DKEY-199I24 in linkage group 18, complete sequence Length = 108129 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 30368 gatgctctttcagctgcaac 30349
>emb|AL844186.7| Zebrafish DNA sequence from clone DKEY-265G24, complete sequence Length = 221158 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 140802 gatgctctttcagctgcaac 140821
>emb|AL928674.5| Zebrafish DNA sequence from clone CH211-10E2, complete sequence Length = 205118 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 21320 gatgctctttcagctgcaac 21339
>emb|AL929053.5| Zebrafish DNA sequence from clone DKEY-21N12 in linkage group 20, complete sequence Length = 142345 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 64922 gatgctctttcagctgcaac 64903
>emb|CR394535.19| Zebrafish DNA sequence from clone CH211-198P19 in linkage group 3, complete sequence Length = 190173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 161811 gatgctctttcagctgcaac 161830
>emb|BX248506.9| Zebrafish DNA sequence from clone DKEY-70K11 in linkage group 5, complete sequence Length = 230400 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 215269 gatgctctttcagctgcaac 215288
>emb|BX571842.14| Zebrafish DNA sequence from clone CH211-191A24 in linkage group 20, complete sequence Length = 168790 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 38413 gatgctctttcagctgcaac 38394
>emb|BX649499.11| Zebrafish DNA sequence from clone DKEY-60A16 in linkage group 20, complete sequence Length = 201391 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 84021 gatgctctttcagctgcaac 84040
>emb|BX901929.9| Zebrafish DNA sequence from clone DKEY-11K24 in linkage group 4, complete sequence Length = 70937 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 66015 gatgctctttcagctgcaac 66034
>emb|BX537287.8| Zebrafish DNA sequence from clone CH211-206O8 in linkage group 19, complete sequence Length = 195505 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 139496 gatgctctttcagctgcaac 139477
>emb|AL928827.10| Zebrafish DNA sequence from clone DKEY-284M18 in linkage group 20, complete sequence Length = 192407 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 37235 gatgctctttcagctgcaac 37216
>emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in linkage group 20, complete sequence Length = 176396 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 18982 gatgctctttcagctgcaac 18963
>emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in linkage group 15, complete sequence Length = 156236 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 25767 gatgctctttcagctgcaac 25786
>emb|BX663609.29| Zebrafish DNA sequence from clone DKEY-182H7 in linkage group 7, complete sequence Length = 248960 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 223166 gatgctctttcagctgcaac 223185
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 4785 gatgctctttcagctgcaac 4766
>emb|CR855881.9| Zebrafish DNA sequence from clone DKEY-232G12 in linkage group 10, complete sequence Length = 132337 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 64952 gatgctctttcagctgcaac 64933
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5, complete sequence Length = 142918 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 4835 gatgctctttcagctgcaac 4816
>gb|AC171010.3| Gallus gallus BAC clone CH261-161I5 from chromosome ul, complete sequence Length = 245010 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 aaggtggttgagctgaaggctttc 47 |||||| ||||||||||||||||| Sbjct: 177730 aaggtgtttgagctgaaggctttc 177753
>emb|BX005120.3| Zebrafish DNA sequence from clone CH211-168J2 in linkage group 1, complete sequence Length = 29329 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 25185 gatgctctttcagctgcaac 25204
>emb|AL935163.7| Zebrafish DNA sequence from clone CH211-206K20, complete sequence Length = 158350 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 105546 gatgctctttcagctgcaac 105527
>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17, complete sequence Length = 205685 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 54937 gatgctctttcagctgcaac 54918
>emb|AL845277.11| Mouse DNA sequence from clone RP23-35J6 on chromosome 2, complete sequence Length = 225087 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tgatagcaagcccagcaaag 117 |||||||||||||||||||| Sbjct: 52245 tgatagcaagcccagcaaag 52226
>gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, complete sequence Length = 236246 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 gcagtgaaccttgacttctc 568 |||||||||||||||||||| Sbjct: 221436 gcagtgaaccttgacttctc 221455
>emb|CR383665.9| Zebrafish DNA sequence from clone DKEY-3G23 in linkage group 14, complete sequence Length = 120923 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 17223 gatgctctttcagctgcaac 17204
>emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in linkage group 15, complete sequence Length = 224998 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gatgctctttcagctgcaac 88 |||||||||||||||||||| Sbjct: 125943 gatgctctttcagctgcaac 125924
>emb|Z36281.1|TBI17RN T.brucei I17 mRNA for flagellar antigen Length = 1539 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 555 gcaagttcctgcagaagcac 574 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 294 gcaagttcctgcagaagcac 313 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 123 gcaagttcctgcagaagcac 142 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gcaagttcctgcagaagcac 143 |||||||||||||||||||| Sbjct: 39 gcaagttcctgcagaagcac 58 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,812,263 Number of Sequences: 3902068 Number of extensions: 4812263 Number of successful extensions: 94688 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 94195 Number of HSP's gapped (non-prelim): 461 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
