ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104589.1| Zea mays PCO067801 mRNA sequence 178 3e-42
2gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 163 2e-37
3gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 163 2e-37
4gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 163 2e-37
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-37
6dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 2e-37
7dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 5e-35
8dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 5e-35
9gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence 42 0.49
10emb|AJ337232.1|HSA337232 Homo sapiens genomic sequence surroundi... 40 1.9
11gb|AY105221.1| Zea mays PCO086679 mRNA sequence 40 1.9
12gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, comp... 40 1.9
13gb|AY789530.1| Oryza sativa (indica cultivar-group) syntaxin rel... 38 7.6
14ref|NM_187897.1| Oryza sativa (japonica cultivar-group), Ozsa833... 38 7.6
15gb|DQ217094.1| Taeniopygia guttata clone 0058P0010G11 translocas... 38 7.6
16gb|DQ217093.1| Taeniopygia guttata clone 0058P0036B12 translocas... 38 7.6
17gb|DQ217092.1| Taeniopygia guttata clone 0058P0056A06 translocas... 38 7.6
18gb|DQ217091.1| Taeniopygia guttata clone 0058P0021E04 translocas... 38 7.6
19gb|DQ217090.1| Taeniopygia guttata clone 0058P0017C04 translocas... 38 7.6
20gb|DQ217089.1| Taeniopygia guttata clone 0058P0013H12 translocas... 38 7.6
21ref|XM_429775.1| PREDICTED: Gallus gallus LOC420610 (LOC420610),... 38 7.6
22gb|BC059558.1| Danio rerio chaperonin containing TCP1, subunit 2... 38 7.6
23gb|AY262695.1| Phytophthora sojae isolate UQ1200 clone 48 unknow... 38 7.6
24emb|Z81487.1|CEC54E10 Caenorhabditis elegans Cosmid C54E10, comp... 38 7.6
25emb|CR728712.2|CNS0GP7Y Tetraodon nigroviridis full-length cDNA 38 7.6
26emb|CR724120.2|CNS0GLOE Tetraodon nigroviridis full-length cDNA 38 7.6
27emb|CR722961.2|CNS0GKS7 Tetraodon nigroviridis full-length cDNA 38 7.6
28emb|CR702614.2|CNS0G536 Tetraodon nigroviridis full-length cDNA 38 7.6
29emb|CR683137.2|CNS0FQ25 Tetraodon nigroviridis full-length cDNA 38 7.6
30ref|XM_847299.1| PREDICTED: Canis familiaris similar to Microtub... 38 7.6
31emb|AL353713.7| Human DNA sequence from clone RP5-1090O5 on chro... 38 7.6
32ref|XM_778289.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 7.6
33emb|X17008.1|SVFUSPOL Sendai virus polymerase (P) gene (strain f... 38 7.6
34emb|X17007.1|SV694POL Sendai virus polymerase (P) gene (strain 6... 38 7.6
35emb|X00087.1|PAMYXSEN Sendai virus genome RNA for proteins NP, P... 38 7.6
36dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
37gb|AF506226.1| Danio rerio chaperonin-containing TCP-1 complex b... 38 7.6
38tpg|BK003732.1| TPA: TPA_inf: Drosophila melanogaster HDC05839 (... 38 7.6
39gb|BC050953.1| Danio rerio, clone IMAGE:5776777, mRNA 38 7.6
40ref|NM_075273.2| Caenorhabditis elegans Serpentine Receptor, cla... 38 7.6
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
42gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, r... 38 7.6
43gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, ... 38 7.6
44ref|NM_201455.1| Danio rerio chaperonin containing TCP1, subunit... 38 7.6
45dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.6
46dbj|AB195968.1| Sendai virus genomic RNA, complete genome, strai... 38 7.6
47dbj|AB195967.1| Sendai virus genomic RNA, complete genome, strai... 38 7.6
48dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 7.6
49dbj|AK024484.1| Homo sapiens mRNA for FLJ00083 protein, partial cds 38 7.6
50dbj|AK068204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.6
51gb|AY909550.1| Sendai virus strain 52 P gene region 38 7.6
52gb|AY909543.1| Sendai virus strain Cantell P gene region 38 7.6
53gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25... 38 7.6
54gb|AE017221.1| Thermus thermophilus HB27, complete genome 38 7.6
55gb|M69046.1|SNDT5RCG Sendai virus strain mutant T-5 revertant, c... 38 7.6
56gb|M30203.1|PAFF1RMUT Sendai virus mutant F1-R nucleoprotein (NP... 38 7.6
57gb|M30202.1|PAFZSTR Sendai virus strain Z nucleoprotein (NP), ph... 38 7.6
58gb|M30204.1|PAFTSF1MUT Sendai virus mutant ts-f1 nucleoprotein (... 38 7.6 
>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score =  178 bits (90), Expect = 3e-42
 Identities = 138/155 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
           ||||||||||||||||||||| |||  |   ||||||||||| |||| ||||||||||||
Sbjct: 194 gatgaaggagaaggtggaggcgtcggtggtggacctggaggccgggaccggggagacgct 253

                                                                       
Query: 61  ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
            ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||
Sbjct: 254 gtacccggggatctcgcgcggggagagcgccctccgatggggcttcgtccgcaaggtcta 313

                                              
Query: 121 cggcatnctctgcgcgcanctgctcctcaccaccg 155
           |||||| |||   ||||| ||||||||||||||||
Sbjct: 314 cggcatcctcgctgcgcagctgctcctcaccaccg 348
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score =  163 bits (82), Expect = 2e-37
 Identities = 136/155 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
           ||||||||||||||||||||| |||  |   ||||||||||| || | ||||||||||||
Sbjct: 148 gatgaaggagaaggtggaggcgtcggtggtggacctggaggccggcaccggggagacgct 207

                                                                       
Query: 61  ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
            ||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||
Sbjct: 208 gtacccggggatctcgcgcggggagagcgccctccgatggggcttcgtccgcaaggtcta 267

                                              
Query: 121 cggcatnctctgcgcgcanctgctcctcaccaccg 155
           |||||  |||   ||||| ||||||||||||||||
Sbjct: 268 cggcaccctcgctgcgcagctgctcctcaccaccg 302
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score =  163 bits (82), Expect = 2e-37
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                          
Query: 1      gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
              |||||||||||||||||| |||||  ||   ||||||||||| || | ||||||||||||
Sbjct: 149685 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 149626

                                                                          
Query: 61     ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
               ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||
Sbjct: 149625 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 149566

                                                 
Query: 121    cggcatnctctgcgcgcanctgctcctcaccaccg 155
              |||||| |||  |||||| ||||||||||||||||
Sbjct: 149565 cggcatcctcgccgcgcagctgctcctcaccaccg 149531
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  163 bits (82), Expect = 2e-37
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
             |||||||||||||||||| |||||  ||   ||||||||||| || | ||||||||||||
Sbjct: 47048 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 46989

                                                                         
Query: 61    ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
              ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||
Sbjct: 46988 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 46929

                                                
Query: 121   cggcatnctctgcgcgcanctgctcctcaccaccg 155
             |||||| |||  |||||| ||||||||||||||||
Sbjct: 46928 cggcatcctcgccgcgcagctgctcctcaccaccg 46894
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  163 bits (82), Expect = 2e-37
 Identities = 136/155 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1        gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
                |||||||||||||||||| |||||  ||   ||||||||||| || | ||||||||||||
Sbjct: 19446336 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 19446277

                                                                            
Query: 61       ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
                 ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||
Sbjct: 19446276 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 19446217

                                                   
Query: 121      cggcatnctctgcgcgcanctgctcctcaccaccg 155
                |||||| |||  |||||| ||||||||||||||||
Sbjct: 19446216 cggcatcctcgccgcgcagctgctcctcaccaccg 19446182
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score =  163 bits (82), Expect = 2e-37
 Identities = 136/155 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
           |||||||||||||||||| |||||  ||   ||||||||||| || | ||||||||||||
Sbjct: 141 gatgaaggagaaggtggacgcctccgcggtggacctggaggccggcaccggggagacgct 200

                                                                       
Query: 61  ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
            ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||
Sbjct: 201 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 260

                                              
Query: 121 cggcatnctctgcgcgcanctgctcctcaccaccg 155
           |||||| |||  |||||| ||||||||||||||||
Sbjct: 261 cggcatcctcgccgcgcagctgctcctcaccaccg 295
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>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score =  155 bits (78), Expect = 5e-35
 Identities = 135/155 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
           |||||||||||||||||  |||||  ||   ||||||||||| || | ||||||||||||
Sbjct: 140 gatgaaggagaaggtgggcgcctccgcggtggacctggaggccggcaccggggagacgct 199

                                                                       
Query: 61  ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
            ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||
Sbjct: 200 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 259

                                              
Query: 121 cggcatnctctgcgcgcanctgctcctcaccaccg 155
           |||||| |||  |||||| ||||||||||||||||
Sbjct: 260 cggcatcctcgccgcgcagctgctcctcaccaccg 294
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score =  155 bits (78), Expect = 5e-35
 Identities = 135/155 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   gatgaaggagaaggtggaggcctcgtcgancgacctggaggcggggaacggggagacgct 60
           |||||||||||||||||  |||||  ||   ||||||||||| || | ||||||||||||
Sbjct: 140 gatgaaggagaaggtgggcgcctccgcggtggacctggaggccggcaccggggagacgct 199

                                                                       
Query: 61  ctacccggggatctcgcgcggggagaacgccctccgctggggcttcatccgcaaggtcta 120
            ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||| ||
Sbjct: 200 gtacccggggatctcgcgcggggagagcgccctccggtgggggttcgtccgcaaggtgta 259

                                              
Query: 121 cggcatnctctgcgcgcanctgctcctcaccaccg 155
           |||||| |||  |||||| ||||||||||||||||
Sbjct: 260 cggcatcctcgccgcgcagctgctcctcaccaccg 294
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>gb|AC092193.4| Bos taurus clone RP42-459A17, complete sequence
          Length = 258544

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      tgaaggagaaggtggaggcct 23
              |||||||||||||||||||||
Sbjct: 200699 tgaaggagaaggtggaggcct 200719
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>emb|AJ337232.1|HSA337232 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-FN12RS
          Length = 816

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  cgccctccgctggggcttca 107
           ||||||||||||||||||||
Sbjct: 155 cgccctccgctggggcttca 136
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>gb|AY105221.1| Zea mays PCO086679 mRNA sequence
          Length = 1138

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 45/54 (83%)
 Strand = Plus / Plus

                                                                 
Query: 105 tcatccgcaaggtctacggcatnctctgcgcgcanctgctcctcaccaccgtcg 158
           ||||||||||| |||||| ||| |||| |   || |||||||||||| ||||||
Sbjct: 307 tcatccgcaagatctacgtcattctctccctccagctgctcctcaccgccgtcg 360
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>gb|AC099701.4| Mus musculus chromosome 7, clone RP23-184F6, complete sequence
          Length = 226167

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      gatgaaggagaaggtggagg 20
              ||||||||||||||||||||
Sbjct: 124282 gatgaaggagaaggtggagg 124263
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>gb|AY789530.1| Oryza sativa (indica cultivar-group) syntaxin related protein
           (Vam3) mRNA, complete cds
          Length = 1284

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 32  gacctggaggcggggaacg 50
           |||||||||||||||||||
Sbjct: 88  gacctggaggcggggaacg 106
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>ref|NM_187897.1| Oryza sativa (japonica cultivar-group), Ozsa8339 predicted mRNA
          Length = 843

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 32 gacctggaggcggggaacg 50
          |||||||||||||||||||
Sbjct: 13 gacctggaggcggggaacg 31
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>gb|DQ217094.1| Taeniopygia guttata clone 0058P0010G11 translocase of outer
           mitochondrial membrane 7 variant 1-like mRNA, complete
           sequence
          Length = 467

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 146 cgccatccgctggggcttcatcc 168
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>gb|DQ217093.1| Taeniopygia guttata clone 0058P0036B12 translocase of outer
           mitochondrial membrane 7 variant 1-like mRNA, complete
           sequence
          Length = 457

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 135 cgccatccgctggggcttcatcc 157
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>gb|DQ217092.1| Taeniopygia guttata clone 0058P0056A06 translocase of outer
           mitochondrial membrane 7 variant 2-like mRNA, complete
           sequence
          Length = 415

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 93  cgccatccgctggggcttcatcc 115
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>gb|DQ217091.1| Taeniopygia guttata clone 0058P0021E04 translocase of outer
           mitochondrial membrane 7 variant 1-like mRNA, complete
           sequence
          Length = 457

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 135 cgccatccgctggggcttcatcc 157
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>gb|DQ217090.1| Taeniopygia guttata clone 0058P0017C04 translocase of outer
           mitochondrial membrane 7 variant 2-like mRNA, complete
           sequence
          Length = 1261

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 138 cgccatccgctggggcttcatcc 160
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>gb|DQ217089.1| Taeniopygia guttata clone 0058P0013H12 translocase of outer
           mitochondrial membrane 7 variant 1-like mRNA, complete
           sequence
          Length = 423

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 102 cgccatccgctggggcttcatcc 124
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>ref|XM_429775.1| PREDICTED: Gallus gallus LOC420610 (LOC420610), mRNA
          Length = 1412

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 88  cgccctccgctggggcttcatcc 110
           |||| ||||||||||||||||||
Sbjct: 656 cgccatccgctggggcttcatcc 678
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>gb|BC059558.1| Danio rerio chaperonin containing TCP1, subunit 2 (beta), mRNA
           (cDNA clone MGC:73212 IMAGE:4790853), complete cds
          Length = 1784

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 847 gatgaaggagaaggtggag 865
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>gb|AY262695.1| Phytophthora sojae isolate UQ1200 clone 48 unknown mRNA linked to
           Avr4/6
          Length = 2747

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 4   gaaggagaaggtggaggcc 22
           |||||||||||||||||||
Sbjct: 557 gaaggagaaggtggaggcc 575
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>emb|Z81487.1|CEC54E10 Caenorhabditis elegans Cosmid C54E10, complete sequence
          Length = 38591

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 4    gaaggagaaggtggaggcc 22
            |||||||||||||||||||
Sbjct: 8508 gaaggagaaggtggaggcc 8526
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>emb|CR728712.2|CNS0GP7Y Tetraodon nigroviridis full-length cDNA
          Length = 1133

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  gatgaaggagaaggtggag 19
          |||||||||||||||||||
Sbjct: 74 gatgaaggagaaggtggag 92
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>emb|CR724120.2|CNS0GLOE Tetraodon nigroviridis full-length cDNA
          Length = 1127

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 1  gatgaaggagaaggtggag 19
          |||||||||||||||||||
Sbjct: 75 gatgaaggagaaggtggag 93
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>emb|CR722961.2|CNS0GKS7 Tetraodon nigroviridis full-length cDNA
          Length = 1275

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 224 gatgaaggagaaggtggag 242
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>emb|CR702614.2|CNS0G536 Tetraodon nigroviridis full-length cDNA
          Length = 1873

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 831 gatgaaggagaaggtggag 849
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>emb|CR683137.2|CNS0FQ25 Tetraodon nigroviridis full-length cDNA
          Length = 1341

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 298 gatgaaggagaaggtggag 316
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>ref|XM_847299.1| PREDICTED: Canis familiaris similar to Microtubule-associated
            serine/threonine-protein kinase 2 (LOC612904), mRNA
          Length = 4191

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 3    tgaaggagaaggtggaggc 21
            |||||||||||||||||||
Sbjct: 3479 tgaaggagaaggtggaggc 3497
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>emb|AL353713.7| Human DNA sequence from clone RP5-1090O5 on chromosome 1 Contains GSSs,
             complete sequence
          Length = 82654

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     atgaaggagaaggtggagg 20
             |||||||||||||||||||
Sbjct: 49228 atgaaggagaaggtggagg 49246
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>ref|XM_778289.1| PREDICTED: Strongylocentrotus purpuratus similar to fetal globin
           inducing factor (LOC578101), mRNA
          Length = 1041

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 157 gatgaaggagaaggtggag 175
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>emb|X17008.1|SVFUSPOL Sendai virus polymerase (P) gene (strain fushimi)
          Length = 1893

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 656 gatgaaggagaaggtggag 674
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>emb|X17007.1|SV694POL Sendai virus polymerase (P) gene (strain 6/94)
          Length = 1893

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 656 gatgaaggagaaggtggag 674
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>emb|X00087.1|PAMYXSEN Sendai virus genome RNA for proteins NP, P, C, M and part of F
          Length = 5824

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2395 gatgaaggagaaggtggag 2413
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    gacctggaggcggggaacg 50
             |||||||||||||||||||
Sbjct: 53412 gacctggaggcggggaacg 53394
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>gb|AF506226.1| Danio rerio chaperonin-containing TCP-1 complex beta chain (cct2)
           mRNA, partial cds
          Length = 1554

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 853 gatgaaggagaaggtggag 871
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>tpg|BK003732.1| TPA: TPA_inf: Drosophila melanogaster HDC05839 (HDC05839) gene,
            complete cds
          Length = 3445

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 91   cctccgctggggcttcatc 109
            |||||||||||||||||||
Sbjct: 1143 cctccgctggggcttcatc 1125
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>gb|BC050953.1| Danio rerio, clone IMAGE:5776777, mRNA
          Length = 1835

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 898 gatgaaggagaaggtggag 916
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>ref|NM_075273.2| Caenorhabditis elegans Serpentine Receptor, class I family member
           (sri-10) (sri-10) mRNA, complete cds
          Length = 1038

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 4   gaaggagaaggtggaggcc 22
           |||||||||||||||||||
Sbjct: 846 gaaggagaaggtggaggcc 828
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 32      gacctggaggcggggaacg 50
               |||||||||||||||||||
Sbjct: 8478259 gacctggaggcggggaacg 8478241
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>gb|AC011696.4|AC011696 Drosophila melanogaster, chromosome 2R, region 48A-48C, BAC clone
              BACR35F01, complete sequence
          Length = 170869

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     cctccgctggggcttcatc 109
              |||||||||||||||||||
Sbjct: 120618 cctccgctggggcttcatc 120600
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>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone
              BACR38D12, complete sequence
          Length = 171831

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     cctccgctggggcttcatc 109
              |||||||||||||||||||
Sbjct: 160937 cctccgctggggcttcatc 160919
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>ref|NM_201455.1| Danio rerio chaperonin containing TCP1, subunit 2 (beta) (cct2),
           mRNA
          Length = 1784

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 847 gatgaaggagaaggtggag 865
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>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0705D01
          Length = 147174

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    gacctggaggcggggaacg 50
             |||||||||||||||||||
Sbjct: 93214 gacctggaggcggggaacg 93196
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>dbj|AB195968.1| Sendai virus genomic RNA, complete genome, strain:Nagoya
          Length = 15384

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2396 gatgaaggagaaggtggag 2414
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>dbj|AB195967.1| Sendai virus genomic RNA, complete genome, strain:pi
          Length = 15384

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2396 gatgaaggagaaggtggag 2414
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 1      gatgaaggagaaggtggaggcct 23
              ||||||||||| |||||||||||
Sbjct: 338372 gatgaaggagatggtggaggcct 338350
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>dbj|AK024484.1| Homo sapiens mRNA for FLJ00083 protein, partial cds
          Length = 4823

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 35   ctggaggcggggaacgggg 53
            |||||||||||||||||||
Sbjct: 3710 ctggaggcggggaacgggg 3728
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>dbj|AK068204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136O09, full
           insert sequence
          Length = 1389

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 32  gacctggaggcggggaacg 50
           |||||||||||||||||||
Sbjct: 194 gacctggaggcggggaacg 212
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>gb|AY909550.1| Sendai virus strain 52 P gene region
          Length = 1730

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 576 gatgaaggagaaggtggag 594
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>gb|AY909543.1| Sendai virus strain Cantell P gene region
          Length = 1730

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gatgaaggagaaggtggag 19
           |||||||||||||||||||
Sbjct: 576 gatgaaggagaaggtggag 594
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>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete
              sequence
          Length = 261690

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     cctccgctggggcttcatc 109
              |||||||||||||||||||
Sbjct: 239110 cctccgctggggcttcatc 239092
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 1       gatgaaggagaaggtggaggcct 23
               ||||||||||| |||||||||||
Sbjct: 1547090 gatgaaggagatggtggaggcct 1547112
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>gb|M69046.1|SNDT5RCG Sendai virus strain mutant T-5 revertant, complete genome
          Length = 15384

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2396 gatgaaggagaaggtggag 2414
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>gb|M30203.1|PAFF1RMUT Sendai virus mutant F1-R nucleoprotein (NP), phosphoprotein (P),
            matrix protein (M), fusion protein (F),
            hemagglutinin-neuraminidase (HN), and L protein (L)
            genes, complete cds
          Length = 15384

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2396 gatgaaggagaaggtggag 2414
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>gb|M30202.1|PAFZSTR Sendai virus strain Z nucleoprotein (NP), phosphoprotein (P), matrix
            protein (M), fusion protein (F),
            hemagglutinin-neuraminidase (HN), and L protein (L)
            genes, complete cds
          Length = 15384

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2396 gatgaaggagaaggtggag 2414
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>gb|M30204.1|PAFTSF1MUT Sendai virus mutant ts-f1 nucleoprotein (NP), phosphoprotein (P),
            matrix protein (M), fusion protein (F),
            hemagglutinin-neuraminidase (HN), and L protein (L)
            genes, complete cds
          Length = 15384

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    gatgaaggagaaggtggag 19
            |||||||||||||||||||
Sbjct: 2396 gatgaaggagaaggtggag 2414


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 840,576
Number of Sequences: 3902068
Number of extensions: 840576
Number of successful extensions: 58847
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58486
Number of HSP's gapped (non-prelim): 353
length of query: 158
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 136
effective length of database: 17,147,199,772
effective search space: 2332019168992
effective search space used: 2332019168992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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