Clone Name | bah62o07 |
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Clone Library Name | barley_pub |
>ref|XM_472384.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1899 Score = 567 bits (286), Expect = e-158 Identities = 514/590 (87%) Strand = Plus / Plus Query: 2 aagatatagtagatgcgtctctggttgaaagttcaaaaaatggtgtcacagtaggcattt 61 ||||||||||||||| ||| |||| ||| ||| | || ||||| ||| |||||||||| Sbjct: 533 aagatatagtagatgtgtcgctggctgacagtgcgaagaatggagtcgatgtaggcattt 592 Query: 62 gtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctggaa 121 ||||||||| ||||||||| ||| ||||||| ||| |||||| |||||| | || | Sbjct: 593 ctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggacgtcaggca 652 Query: 122 gagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatggg 181 |||| ||||||||||||||||||||||||||||| || || | ||||||||||||||||| Sbjct: 653 gagacgtttggtggcaggatgttgtgcccaattttccaacaaaatgtgatgtggaatggg 712 Query: 182 ttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 | |||||||||||||||||||||||||| || || ||||| ||||||||||| ||||||| Sbjct: 713 tagatgcagaggatccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 772 Query: 242 gtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgcat 301 ||||||||||||||||||| ||||||||||| || | |||||||||||||| || |||| Sbjct: 773 gtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacgcat 832 Query: 302 ttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactggac 361 ||||| |||| ||| |||| |||||||||||||||||||||||||| ||||||||||| | Sbjct: 833 ttgattacaagccatcagatatatactggtgcactgcagactgtgggtggattactgggc 892 Query: 362 atagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaagggg 421 ||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 893 atagttatgtgacatatggtcctctcctgaatggagccacagttcttgtttacgaagggg 952 Query: 422 ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481 |||||||||| ||||||||| |||| ||||||||| | |||||||||||| ||||| | Sbjct: 953 ctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgacga 1012 Query: 482 tattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgttg 541 ||||||||||||||||||||||||| ||| |||| |||||||||||| ||| ||||||| Sbjct: 1013 tattttatactgcaccaacacttattcgtgcactcatgcgtgatggtaccgagtatgtta 1072 Query: 542 atcggtcctctcgtaagtccctccgagttttaggaagtgtgggtgagcca 591 ||||| |||||||| || || |||||| ||||||| || || |||||| Sbjct: 1073 ctcggtattctcgtaaatctcttcgagttctaggaagcgtaggcgagcca 1122
>ref|XM_466041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2517 Score = 444 bits (224), Expect = e-121 Identities = 416/480 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 913 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 972 Query: 121 agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180 || |||||||||||||||||||||||| ||| |||||| || | || ||||| |||||| Sbjct: 973 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1032 Query: 181 gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240 || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 1033 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1092 Query: 241 ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300 ||||| |||||||| || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 1093 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1152 Query: 301 tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360 |||||| |||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1212 Query: 361 catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420 || || |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 1213 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1272 Query: 421 gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1273 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1332 Query: 481 atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540 |||||||| |||||||||||||| | || ||||| ||||||||||| ||| ||||||| Sbjct: 1333 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1392
>ref|XM_506818.1| PREDICTED Oryza sativa (japonica cultivar-group), P0415B12.41 mRNA Length = 2763 Score = 444 bits (224), Expect = e-121 Identities = 416/480 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 1165 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 1224 Query: 121 agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180 || |||||||||||||||||||||||| ||| |||||| || | || ||||| |||||| Sbjct: 1225 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1284 Query: 181 gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240 || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 1285 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1344 Query: 241 ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300 ||||| |||||||| || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 1345 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1404 Query: 301 tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360 |||||| |||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1464 Query: 361 catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420 || || |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 1465 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1524 Query: 421 gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1525 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1584 Query: 481 atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540 |||||||| |||||||||||||| | || ||||| ||||||||||| ||| ||||||| Sbjct: 1585 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1644
>dbj|AK066073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P13, full insert sequence Length = 2763 Score = 444 bits (224), Expect = e-121 Identities = 416/480 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 1165 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 1224 Query: 121 agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180 || |||||||||||||||||||||||| ||| |||||| || | || ||||| |||||| Sbjct: 1225 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1284 Query: 181 gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240 || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 1285 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1344 Query: 241 ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300 ||||| |||||||| || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 1345 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1404 Query: 301 tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360 |||||| |||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1464 Query: 361 catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420 || || |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 1465 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1524 Query: 421 gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1525 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1584 Query: 481 atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540 |||||||| |||||||||||||| | || ||||| ||||||||||| ||| ||||||| Sbjct: 1585 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1644
>dbj|AK060822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B02, full insert sequence Length = 1625 Score = 444 bits (224), Expect = e-121 Identities = 416/480 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 53 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 112 Query: 121 agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180 || |||||||||||||||||||||||| ||| |||||| || | || ||||| |||||| Sbjct: 113 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 172 Query: 181 gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240 || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 173 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 232 Query: 241 ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300 ||||| |||||||| || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 233 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 292 Query: 301 tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360 |||||| |||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 352 Query: 361 catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420 || || |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 353 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 412 Query: 421 gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 413 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 472 Query: 481 atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540 |||||||| |||||||||||||| | || ||||| ||||||||||| ||| ||||||| Sbjct: 473 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 532
>dbj|AK067696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F19, full insert sequence Length = 2516 Score = 436 bits (220), Expect = e-119 Identities = 415/480 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 912 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 971 Query: 121 agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180 || | |||||||||||||||||||||| ||| |||||| || | || ||||| |||||| Sbjct: 972 aggggtgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1031 Query: 181 gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240 || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| |||||| Sbjct: 1032 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1091 Query: 241 ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300 ||||| |||||||| || |||||||| ||||| || |||||||||||||| ||||| Sbjct: 1092 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1151 Query: 301 tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360 |||||| |||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1152 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1211 Query: 361 catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420 || || |||||||| |||||||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 1212 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1271 Query: 421 gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||| Sbjct: 1272 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1331 Query: 481 atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540 |||||||| |||||||||||||| | || ||||| ||||||||||| ||| ||||||| Sbjct: 1332 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1391
>ref|NM_123046.2| Arabidopsis thaliana catalytic AT5G36880 transcript variant AT5G36880.1 mRNA, complete cds Length = 2521 Score = 174 bits (88), Expect = 2e-40 Identities = 274/336 (81%) Strand = Plus / Plus Query: 166 tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225 ||||| |||||||||||||||||||| ||||| ||||| | || ||||| ||||| || Sbjct: 1058 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 1117 Query: 226 acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285 || || || ||||||||||| | || ||||| || || |||||| | || | || ||| Sbjct: 1118 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1177 Query: 286 acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345 || || ||| |||||||||| ||||| ||||||| |||||||||| || ||||| ||| Sbjct: 1178 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1237 Query: 346 ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405 || ||||| ||||| ||||| ||||| |||||||| || | || ||||||||||| ||| Sbjct: 1238 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1297 Query: 406 ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465 | || | ||| |||||||||||||||||||| ||||| || |||||||| || |||||| Sbjct: 1298 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1357 Query: 466 aaatacaaagtgacaatattttatactgcaccaaca 501 |||||||| || |||||||||||||||| |||||| Sbjct: 1358 aaatacaaggtttcaatattttatactgccccaaca 1393 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 117 tggaagagatgtttggtggcaggatgtt 144 |||||||||||| ||||||||||||||| Sbjct: 1009 tggaagagatgtgtggtggcaggatgtt 1036
>ref|NM_001036897.1| Arabidopsis thaliana catalytic AT5G36880 transcript variant AT5G36880.2 mRNA, complete cds Length = 2570 Score = 174 bits (88), Expect = 2e-40 Identities = 274/336 (81%) Strand = Plus / Plus Query: 166 tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225 ||||| |||||||||||||||||||| ||||| ||||| | || ||||| ||||| || Sbjct: 1020 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 1079 Query: 226 acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285 || || || ||||||||||| | || ||||| || || |||||| | || | || ||| Sbjct: 1080 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1139 Query: 286 acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345 || || ||| |||||||||| ||||| ||||||| |||||||||| || ||||| ||| Sbjct: 1140 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1199 Query: 346 ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405 || ||||| ||||| ||||| ||||| |||||||| || | || ||||||||||| ||| Sbjct: 1200 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1259 Query: 406 ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465 | || | ||| |||||||||||||||||||| ||||| || |||||||| || |||||| Sbjct: 1260 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1319 Query: 466 aaatacaaagtgacaatattttatactgcaccaaca 501 |||||||| || |||||||||||||||| |||||| Sbjct: 1320 aaatacaaggtttcaatattttatactgccccaaca 1355 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 117 tggaagagatgtttggtggcaggatgtt 144 |||||||||||| ||||||||||||||| Sbjct: 971 tggaagagatgtgtggtggcaggatgtt 998
>gb|AY045880.1| Arabidopsis thaliana putative acetyl-CoA synthetase (At5g36880) mRNA, complete cds Length = 2454 Score = 174 bits (88), Expect = 2e-40 Identities = 274/336 (81%) Strand = Plus / Plus Query: 166 tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225 ||||| |||||||||||||||||||| ||||| ||||| | || ||||| ||||| || Sbjct: 1058 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 1117 Query: 226 acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285 || || || ||||||||||| | || ||||| || || |||||| | || | || ||| Sbjct: 1118 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1177 Query: 286 acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345 || || ||| |||||||||| ||||| ||||||| |||||||||| || ||||| ||| Sbjct: 1178 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1237 Query: 346 ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405 || ||||| ||||| ||||| ||||| |||||||| || | || ||||||||||| ||| Sbjct: 1238 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1297 Query: 406 ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465 | || | ||| |||||||||||||||||||| ||||| || |||||||| || |||||| Sbjct: 1298 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1357 Query: 466 aaatacaaagtgacaatattttatactgcaccaaca 501 |||||||| || |||||||||||||||| |||||| Sbjct: 1358 aaatacaaggtttcaatattttatactgccccaaca 1393 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 117 tggaagagatgtttggtggcaggatgtt 144 |||||||||||| ||||||||||||||| Sbjct: 1009 tggaagagatgtgtggtggcaggatgtt 1036
>gb|BT002371.1| Arabidopsis thaliana clone U10380 putative acetyl-CoA synthetase (At5g36880) mRNA, complete cds Length = 2113 Score = 174 bits (88), Expect = 2e-40 Identities = 274/336 (81%) Strand = Plus / Plus Query: 166 tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225 ||||| |||||||||||||||||||| ||||| ||||| | || ||||| ||||| || Sbjct: 880 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 939 Query: 226 acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285 || || || ||||||||||| | || ||||| || || |||||| | || | || ||| Sbjct: 940 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 999 Query: 286 acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345 || || ||| |||||||||| ||||| ||||||| |||||||||| || ||||| ||| Sbjct: 1000 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1059 Query: 346 ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405 || ||||| ||||| ||||| ||||| |||||||| || | || ||||||||||| ||| Sbjct: 1060 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1119 Query: 406 ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465 | || | ||| |||||||||||||||||||| ||||| || |||||||| || |||||| Sbjct: 1120 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1179 Query: 466 aaatacaaagtgacaatattttatactgcaccaaca 501 |||||||| || |||||||||||||||| |||||| Sbjct: 1180 aaatacaaggtttcaatattttatactgccccaaca 1215 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 117 tggaagagatgtttggtggcaggatgtt 144 |||||||||||| ||||||||||||||| Sbjct: 831 tggaagagatgtgtggtggcaggatgtt 858
>gb|AF036618.1|AF036618 Arabidopsis thaliana acetyl-CoA synthetase mRNA, complete cds Length = 2382 Score = 159 bits (80), Expect = 1e-35 Identities = 272/336 (80%) Strand = Plus / Plus Query: 166 tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225 ||||| |||||||||||||||||||| ||||| ||||| | || ||||| ||||| || Sbjct: 923 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 982 Query: 226 acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285 || || || ||||||||||| | || ||||| || || |||||| | || | || ||| Sbjct: 983 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1042 Query: 286 acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345 || || ||| |||||||||| ||||| ||||||| |||||||||| || ||||| ||| Sbjct: 1043 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1102 Query: 346 ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405 || ||||| ||||| ||||| ||||| |||||||| || | || ||||||||||| ||| Sbjct: 1103 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1162 Query: 406 ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465 | || ||| |||||||||||||||||||| ||||| || ||| |||| || |||||| Sbjct: 1163 gttgtccttgagggggctccaaactaccctgaccctggacgctgtcgggatattgttgac 1222 Query: 466 aaatacaaagtgacaatattttatactgcaccaaca 501 |||||||| || |||||||||||||||| |||||| Sbjct: 1223 aaatacaaggtttcaatattttatactgccccaaca 1258 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 117 tggaagagatgtttggtggcaggatgtt 144 |||||||||||| ||||||||||||||| Sbjct: 874 tggaagagatgtgtggtggcaggatgtt 901
>emb|X98506.1|STACS S.tuberosum mRNA for acetyl-CoA synthetase Length = 2383 Score = 157 bits (79), Expect = 5e-35 Identities = 274/339 (80%) Strand = Plus / Plus Query: 165 atgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcag 224 |||||||||||| |||||||||||||| ||||| | || || || ||||||||||| || Sbjct: 963 atgtgatgtggagtgggttgatgcagaagatccccttttcctgctttacactagtgggag 1022 Query: 225 cacaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaac 284 || ||||| || |||||||| |||||||||||||| || |||||||| || | || || Sbjct: 1023 taccggaaagcctaagggtgtcttgcatacaacgggaggatatatggtgtacactgctac 1082 Query: 285 aacatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactg 344 ||||| || |||||||||| |||| || ||||||||||| ||||| || || ||||| Sbjct: 1083 tacattcaagtatgcatttgactacaagccgacagacatatattggtgtacagctgactg 1142 Query: 345 tggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagt 404 ||| ||||||||||| ||||||||||| || ||||| ||| | || |||||||| || || Sbjct: 1143 tggttggattactgggcatagttatgtaacctatggacctttgctaaatggagcaactgt 1202 Query: 405 tctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttga 464 | | |||| ||||||||| ||||| || || ||| || || |||||||| || ||||| Sbjct: 1203 tgtggtttttgaaggggccccaaattatcccgatgtcgggcgttgttgggatattgttga 1262 Query: 465 caaatacaaagtgacaatattttatactgcaccaacact 503 || || || || ||||||||||||| || |||||||| Sbjct: 1263 taagtataaggtttcaatattttatacagctccaacact 1301
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 145 bits (73), Expect = 2e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 329 ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388 ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 58928 ggtgcactgcagactgtgggtggattactgggcatagttatgtgacatatggtcctctcc 58987 Query: 389 tgaatggagccacagttctcgtttatgaagggg 421 ||||||||||||||||||| ||||| ||||||| Sbjct: 58988 tgaatggagccacagttcttgtttacgaagggg 59020 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 136 caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195 |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 58542 caggatgttgtgcccaattttccaacaaaatgtgatgtggaatgggtagatgcagaggat 58601 Query: 196 ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 |||||||||||||| || || ||||| ||||||||||| ||||||| Sbjct: 58602 ccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 58647 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 420 ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479 |||||||||||| ||||||||| |||| ||||||||| | |||||||||||| ||||| Sbjct: 59149 ggctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgac 59208 Query: 480 aatattttatactgcaccaacacttatccgttcacttatgcgtgatggt 528 |||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 59209 gatattttatactgcaccaacacttattcgtgcactcatgcgtgatggt 59257 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 239 agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298 |||||||||||||||||||||| ||||||||||| || | |||||||||||||| || | Sbjct: 58721 agggtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacg 58780 Query: 299 catttgatcacaaaccaacagacatatactggt 331 |||||||| |||| ||| |||| |||||||||| Sbjct: 58781 catttgattacaagccatcagatatatactggt 58813 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 54 aggcatttgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggat 113 |||||||| ||||||||| ||||||||| ||| ||||||| ||| |||||| |||||| Sbjct: 58286 aggcatttctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggac 58345 Query: 114 agctggaagagatgtttggtggcagg 139 | || ||||| ||||||||||||| Sbjct: 58346 gtcaggcagagacgtttggtggcagg 58371
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 145 bits (73), Expect = 2e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 329 ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388 ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 151687 ggtgcactgcagactgtgggtggattactgggcatagttatgtgacatatggtcctctcc 151746 Query: 389 tgaatggagccacagttctcgtttatgaagggg 421 ||||||||||||||||||| ||||| ||||||| Sbjct: 151747 tgaatggagccacagttcttgtttacgaagggg 151779 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 136 caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195 |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 151301 caggatgttgtgcccaattttccaacaaaatgtgatgtggaatgggtagatgcagaggat 151360 Query: 196 ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 |||||||||||||| || || ||||| ||||||||||| ||||||| Sbjct: 151361 ccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 151406 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 420 ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479 |||||||||||| ||||||||| |||| ||||||||| | |||||||||||| ||||| Sbjct: 151908 ggctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgac 151967 Query: 480 aatattttatactgcaccaacacttatccgttcacttatgcgtgatggt 528 |||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 151968 gatattttatactgcaccaacacttattcgtgcactcatgcgtgatggt 152016 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 239 agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298 |||||||||||||||||||||| ||||||||||| || | |||||||||||||| || | Sbjct: 151480 agggtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacg 151539 Query: 299 catttgatcacaaaccaacagacatatactggt 331 |||||||| |||| ||| |||| |||||||||| Sbjct: 151540 catttgattacaagccatcagatatatactggt 151572 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 54 aggcatttgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggat 113 |||||||| ||||||||| ||||||||| ||| ||||||| ||| |||||| |||||| Sbjct: 151045 aggcatttctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggac 151104 Query: 114 agctggaagagatgtttggtggcagg 139 | || ||||| ||||||||||||| Sbjct: 151105 gtcaggcagagacgtttggtggcagg 151130
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 145 bits (73), Expect = 2e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 329 ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388 ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 20089024 ggtgcactgcagactgtgggtggattactgggcatagttatgtgacatatggtcctctcc 20089083 Query: 389 tgaatggagccacagttctcgtttatgaagggg 421 ||||||||||||||||||| ||||| ||||||| Sbjct: 20089084 tgaatggagccacagttcttgtttacgaagggg 20089116 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 136 caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195 |||||||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 20088638 caggatgttgtgcccaattttccaacaaaatgtgatgtggaatgggtagatgcagaggat 20088697 Query: 196 ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 |||||||||||||| || || ||||| ||||||||||| ||||||| Sbjct: 20088698 ccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 20088743 Score = 121 bits (61), Expect = 3e-24 Identities = 97/109 (88%) Strand = Plus / Plus Query: 420 ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479 |||||||||||| ||||||||| |||| ||||||||| | |||||||||||| ||||| Sbjct: 20089245 ggctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgac 20089304 Query: 480 aatattttatactgcaccaacacttatccgttcacttatgcgtgatggt 528 |||||||||||||||||||||||||| ||| |||| |||||||||||| Sbjct: 20089305 gatattttatactgcaccaacacttattcgtgcactcatgcgtgatggt 20089353 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 239 agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298 |||||||||||||||||||||| ||||||||||| || | |||||||||||||| || | Sbjct: 20088817 agggtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacg 20088876 Query: 299 catttgatcacaaaccaacagacatatactggt 331 |||||||| |||| ||| |||| |||||||||| Sbjct: 20088877 catttgattacaagccatcagatatatactggt 20088909 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 54 aggcatttgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggat 113 |||||||| ||||||||| ||||||||| ||| ||||||| ||| |||||| |||||| Sbjct: 20088382 aggcatttctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggac 20088441 Query: 114 agctggaagagatgtttggtggcagg 139 | || ||||| ||||||||||||| Sbjct: 20088442 gtcaggcagagacgtttggtggcagg 20088467
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 329 ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388 |||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||| Sbjct: 19241316 ggtgcactgcagactgtggctggattactggacacagctatgtgacgtatggtccactcc 19241375 Query: 389 tgaatggagccacagttctcgtttatgaagggg 421 |||||||||| ||||||||||||| |||||||| Sbjct: 19241376 tgaatggagcaacagttctcgtttttgaagggg 19241408 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 422 ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||| Sbjct: 19241735 ctccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgacaa 19241794 Query: 482 tattttatactgcaccaacacttatccgttcacttatgcgtgatgg 527 ||||||| |||||||||||||| | || ||||| ||||||||||| Sbjct: 19241795 tattttacactgcaccaacactcgttcgatcactcatgcgtgatgg 19241840 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 136 caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195 |||||||||||| ||| |||||| || | || ||||| |||||||| ||||||||||| Sbjct: 19240914 caggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgggtggatgcagaggac 19240973 Query: 196 ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 |||||||| ||||||||||| |||||||| |||||||| ||||||| Sbjct: 19240974 ccattgttccttctgtacacaagtggcagtacaggaaagccaaagg 19241019 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 19240705 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 19240764 Query: 121 agagatgtttggtggcagg 139 || |||||||||||||||| Sbjct: 19240765 agggatgtttggtggcagg 19240783 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 239 agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298 ||||||| |||||||| || |||||||| ||||| || |||||||||||||| ||| Sbjct: 19241102 agggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatg 19241161 Query: 299 catttgatcacaaaccaacagacatatactggt 331 |||||||| |||| || | ||||||||||||| Sbjct: 19241162 catttgattacaagccgtcggacatatactggt 19241194
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 329 ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388 |||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||| Sbjct: 9114 ggtgcactgcagactgtggctggattactggacacagctatgtgacgtatggtccactcc 9173 Query: 389 tgaatggagccacagttctcgtttatgaagggg 421 |||||||||| ||||||||||||| |||||||| Sbjct: 9174 tgaatggagcaacagttctcgtttttgaagggg 9206 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 422 ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||| Sbjct: 9533 ctccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgacaa 9592 Query: 482 tattttatactgcaccaacacttatccgttcacttatgcgtgatgg 527 ||||||| |||||||||||||| | || ||||| ||||||||||| Sbjct: 9593 tattttacactgcaccaacactcgttcgatcactcatgcgtgatgg 9638 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 136 caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195 |||||||||||| ||| |||||| || | || ||||| |||||||| ||||||||||| Sbjct: 8712 caggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgggtggatgcagaggac 8771 Query: 196 ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 |||||||| ||||||||||| |||||||| |||||||| ||||||| Sbjct: 8772 ccattgttccttctgtacacaagtggcagtacaggaaagccaaagg 8817 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 8503 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 8562 Query: 121 agagatgtttggtggcagg 139 || |||||||||||||||| Sbjct: 8563 agggatgtttggtggcagg 8581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 239 agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298 ||||||| |||||||| || |||||||| ||||| || |||||||||||||| ||| Sbjct: 8900 agggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatg 8959 Query: 299 catttgatcacaaaccaacagacatatactggt 331 |||||||| |||| || | ||||||||||||| Sbjct: 8960 catttgattacaagccgtcggacatatactggt 8992
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 137 bits (69), Expect = 5e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 329 ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388 |||||||||||||||||||||||||||||||||| || |||||||| |||||||| |||| Sbjct: 139565 ggtgcactgcagactgtggctggattactggacacagctatgtgacgtatggtccactcc 139624 Query: 389 tgaatggagccacagttctcgtttatgaagggg 421 |||||||||| ||||||||||||| |||||||| Sbjct: 139625 tgaatggagcaacagttctcgtttttgaagggg 139657 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 422 ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481 ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||| Sbjct: 139984 ctccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgacaa 140043 Query: 482 tattttatactgcaccaacacttatccgttcacttatgcgtgatgg 527 ||||||| |||||||||||||| | || ||||| ||||||||||| Sbjct: 140044 tattttacactgcaccaacactcgttcgatcactcatgcgtgatgg 140089 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 136 caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195 |||||||||||| ||| |||||| || | || ||||| |||||||| ||||||||||| Sbjct: 139163 caggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgggtggatgcagaggac 139222 Query: 196 ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241 |||||||| ||||||||||| |||||||| |||||||| ||||||| Sbjct: 139223 ccattgttccttctgtacacaagtggcagtacaggaaagccaaagg 139268 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 61 tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120 ||||||||||||||||||||| || ||||||| ||| |||||| ||||| ||| ||| Sbjct: 138954 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 139013 Query: 121 agagatgtttggtggcagg 139 || |||||||||||||||| Sbjct: 139014 agggatgtttggtggcagg 139032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 239 agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298 ||||||| |||||||| || |||||||| ||||| || |||||||||||||| ||| Sbjct: 139351 agggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatg 139410 Query: 299 catttgatcacaaaccaacagacatatactggt 331 |||||||| |||| || | ||||||||||||| Sbjct: 139411 catttgattacaagccgtcggacatatactggt 139443
>gb|AY104427.1| Zea mays PCO084078 mRNA sequence Length = 1245 Score = 113 bits (57), Expect = 7e-22 Identities = 168/205 (81%) Strand = Plus / Plus Query: 387 cctgaatggagccacagttctcgtttatgaaggggctccaaactaccctgatcctggtcg 446 ||||||||| || || |||||||||| ||||||| | || |||||||||||| | || || Sbjct: 1 cctgaatggtgctacggttctcgtttttgaagggacgccgaactaccctgattcgggccg 60 Query: 447 gtgttgggacatcgttgacaaatacaaagtgacaatattttatactgcaccaacacttat 506 || ||||| || || ||||| ||||| |||||||||||||||||||| ||||| ||| | Sbjct: 61 atgctgggatattgtggacaagtacaatgtgacaatattttatactgccccaactcttgt 120 Query: 507 ccgttcacttatgcgtgatggttccgtgtatgttgatcggtcctctcgtaagtccctccg 566 |||||||| ||||||||||| | | ||||||| || | |||||| ||||| ||||| Sbjct: 121 tcgttcactcatgcgtgatggcactgagtatgttacacgttactctcgaaagtctctccg 180 Query: 567 agttttaggaagtgtgggtgagcca 591 ||| | |||||||| ||||||||| Sbjct: 181 agtcctgggaagtgttggtgagcca 205
>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8 Length = 70098 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 420 ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479 |||||||||||||||||| ||||| || |||||||| || |||||||||||||| || | Sbjct: 66833 ggctccaaactaccctgaccctggacgctgttgggatattgttgacaaatacaaggtttc 66774 Query: 480 aatattttatactgcaccaaca 501 ||||||||||||||| |||||| Sbjct: 66773 aatattttatactgccccaaca 66752 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 166 tgtgatgtggaatgggttgatgcagaggatcc 197 ||||| |||||||||||||||||||| ||||| Sbjct: 67428 tgtgaggtggaatgggttgatgcagaagatcc 67397 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Minus Query: 337 gcagactgtggctggattactggacatagttatgtgacttatggtcctctcctgaatgga 396 ||||| ||||| ||||| ||||| ||||| ||||| |||||||| || | || |||||| Sbjct: 67090 gcagattgtggttggataactggccatagctatgttacttatggaccaatgcttaatgga 67031 Query: 397 gccac 401 ||||| Sbjct: 67030 gccac 67026
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 225 cacaggaaaaccaaagggtgtattgcatacaacggggggctatatggta 273 |||||||||||| ||||||||| | ||||| |||||||||||||||||| Sbjct: 578158 cacaggaaaacccaagggtgtagtccataccacggggggctatatggta 578110
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 172 gtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagcacagga 231 ||||| ||| ||||||||||||||||| | ||||| || || |||||||| || || ||| Sbjct: 42146 gtggagtggcttgatgcagaggatccactttttctactctatactagtggaagtaccgga 42205 Query: 232 aaaccaaagg 241 ||||| |||| Sbjct: 42206 aaacctaagg 42215 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 265 tatatggtatatgccgcaacaacatttaaacatgcatttgatcacaaaccaacagacata 324 ||||||||||| | |||||||||||||| |||||||||| |||| ||| | ||||| Sbjct: 42334 tatatggtatacactgcaacaacatttaagtatgcatttgactacaagccatctgacatc 42393 Query: 325 tactggt 331 ||||||| Sbjct: 42394 tactggt 42400
>gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) (NR3C1) gene, complete cds Length = 127687 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tttgtttgacatatgaaaatca 80 |||||||||||||||||||||| Sbjct: 38206 tttgtttgacatatgaaaatca 38185
>ref|XM_784861.1| PREDICTED: Strongylocentrotus purpuratus similar to acetyl-CoA synthetase 2-like (LOC585020), partial mRNA Length = 952 Score = 44.1 bits (22), Expect = 0.51 Identities = 37/42 (88%) Strand = Plus / Plus Query: 346 ggctggattactggacatagttatgtgacttatggtcctctc 387 ||||||||||||||||| || ||||| ||||||||||||| Sbjct: 388 ggctggattactggacacagctatgtcgtttatggtcctctc 429
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 346 ggctggattactggacatagttatgtgacttatggtcc 383 ||||||||||| || ||||||||| ||| ||||||||| Sbjct: 3401364 ggctggattacaggtcatagttatctgatttatggtcc 3401327
>emb|AL049644.1|SPCC191 S.pombe chromosome III cosmid c191 Length = 25000 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Minus Query: 188 cagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagggtgt 245 ||||| |||| ||||| ||||| |||||| ||| || ||||||||||| |||||||| Sbjct: 5239 cagagcatcccttgttccttctctacacttctggaagtacaggaaaacccaagggtgt 5182
>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence Length = 164668 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 tttgtttgacatatgaaaatca 80 |||||||||||||||||||||| Sbjct: 84878 tttgtttgacatatgaaaatca 84899
>gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, complete sequence Length = 237712 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 59 tttgtttgacatatgaaaatca 80 |||||||||||||||||||||| Sbjct: 16052 tttgtttgacatatgaaaatca 16031
>ref|NM_001023281.1| Schizosaccharomyces pombe 972h- acetyl-coenzyme A synthetase (SPCC417.14c), partial mRNA Length = 1989 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 188 cagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagggtgt 245 ||||| |||| ||||| ||||| |||||| ||| || ||||||||||| |||||||| Sbjct: 791 cagagcatcccttgttccttctctacacttctggaagtacaggaaaacccaagggtgt 848
>dbj|D89121.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 0447 Length = 1864 Score = 44.1 bits (22), Expect = 0.51 Identities = 49/58 (84%) Strand = Plus / Plus Query: 188 cagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagggtgt 245 ||||| |||| ||||| ||||| |||||| ||| || ||||||||||| |||||||| Sbjct: 503 cagagcatcccttgttccttctctacacttctggaagtacaggaaaacccaagggtgt 560
>gb|AC011292.3| Homo sapiens BAC clone RP11-69N1 from 7, complete sequence Length = 107137 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 376 tatggtcctctcctgaatggagcca 400 |||||||||| |||||||||||||| Sbjct: 5673 tatggtcctcacctgaatggagcca 5649
>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence Length = 220120 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 tatggtcctctcctgaatggagcca 400 |||||||||| |||||||||||||| Sbjct: 213293 tatggtcctcacctgaatggagcca 213317
>gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosome 12, complete sequence Length = 174908 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 aaagtgacaatattttatact 492 ||||||||||||||||||||| Sbjct: 36241 aaagtgacaatattttatact 36261
>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5 Length = 349082 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 tggattactggacatagttat 369 ||||||||||||||||||||| Sbjct: 240965 tggattactggacatagttat 240985
>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence Length = 172715 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 atgtggaatgggttgatgcagagga 194 ||||| ||||||||||||||||||| Sbjct: 22059 atgtgaaatgggttgatgcagagga 22035
>ref|XM_683412.1| PREDICTED: Danio rerio similar to MGC80104 protein (LOC560020), partial mRNA Length = 1130 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 325 tactggtgcactgcagactgtggctggat 353 |||||||||||||||||| ||||||||| Sbjct: 305 tactggtgcactgcagacattggctggat 333
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 319 gacatatactggtgcactgcagactgtggctggattactgg 359 ||||| |||||||||||||| ||| |||||||||||||| Sbjct: 2145034 gacatctactggtgcactgccgacatcggctggattactgg 2145074
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 217 agtggcagcacaggaaaaccaaagg 241 |||||||||||||| |||||||||| Sbjct: 92473 agtggcagcacaggcaaaccaaagg 92449
>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome Length = 2519802 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 319 gacatatactggtgcactgcagactgtggctggattactgg 359 ||||| |||||||||||||| ||| |||||||||||||| Sbjct: 1516887 gacatctactggtgcactgccgacatcggctggattactgg 1516927
>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence Length = 185353 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gtgacttatggtcctctcct 389 |||||||||||||||||||| Sbjct: 105522 gtgacttatggtcctctcct 105541
>gb|AC140482.2| Mus musculus BAC clone RP24-133E1 from chromosome 10, complete sequence Length = 154925 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 catttaaacatgcatttgat 306 |||||||||||||||||||| Sbjct: 13360 catttaaacatgcatttgat 13379
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 tggattactggacatagtta 368 |||||||||||||||||||| Sbjct: 1488069 tggattactggacatagtta 1488050
>emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chromosome 1 Contains the 5' end of a novel gene (FLJ40773) and a CpG island, complete sequence Length = 163621 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tggtcctctcctgaatggag 397 |||||||||||||||||||| Sbjct: 112248 tggtcctctcctgaatggag 112229
>gb|AC098612.3| Homo sapiens chromosome 8 clone RP11-409I21 map 8p21-p11, complete sequence Length = 147588 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 291 taaacatgcatttgatcacaaaccaacagaca 322 |||||||||||||||||| ||| ||| ||||| Sbjct: 1901 taaacatgcatttgatcagaaaacaatagaca 1870
>gb|AC087343.4| Homo sapiens chromosome 8, clone RP11-734J24, complete sequence Length = 54346 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 291 taaacatgcatttgatcacaaaccaacagaca 322 |||||||||||||||||| ||| ||| ||||| Sbjct: 3274 taaacatgcatttgatcagaaaacaatagaca 3305
>gb|AC099514.2| Homo sapiens chromosome 5 clone RP11-454E7, complete sequence Length = 181674 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 caacatttaaacatgcattt 303 |||||||||||||||||||| Sbjct: 110546 caacatttaaacatgcattt 110527
>emb|BX323022.11| Zebrafish DNA sequence from clone DKEYP-77C1 in linkage group 10, complete sequence Length = 145324 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 aacatttaaacatgcatttg 304 |||||||||||||||||||| Sbjct: 14390 aacatttaaacatgcatttg 14371
>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tgtttgacatatgaaaatca 80 |||||||||||||||||||| Sbjct: 46658 tgtttgacatatgaaaatca 46639
>ref|XM_625127.1| PREDICTED: Apis mellifera similar to target of rapamycin (LOC409393), mRNA Length = 7329 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 agttcaaaaaatggtgtcac 50 |||||||||||||||||||| Sbjct: 533 agttcaaaaaatggtgtcac 514
>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence Length = 211987 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 gtttgacatatgaaaatcag 81 |||||||||||||||||||| Sbjct: 93705 gtttgacatatgaaaatcag 93724
>gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167113 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 368 atgtgacttatggtcctctcctga 391 ||||||||||||||||||| |||| Sbjct: 133399 atgtgacttatggtcctctgctga 133376
>emb|BX005449.4| Zebrafish DNA sequence from clone CH211-174A15 in linkage group 10, complete sequence Length = 142054 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 aacatttaaacatgcatttg 304 |||||||||||||||||||| Sbjct: 122342 aacatttaaacatgcatttg 122361
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 8.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 319 gacatatactggtgcactgcagactgtggctggattactggaca 362 ||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct: 332109 gacatattctggtgcactgccgacatcggctggattacgggaca 332152
>dbj|D00711.1|PELLBP Periplaneta americana mRNA for lipopolysaccharide-binding protein, complete cds Length = 2309 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atggagccacagttctcgtt 411 |||||||||||||||||||| Sbjct: 736 atggagccacagttctcgtt 717
>emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chromosome 2, complete sequence Length = 215389 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 aggaaaaccaaagggtgtat 247 |||||||||||||||||||| Sbjct: 108853 aggaaaaccaaagggtgtat 108872
>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence Length = 138670 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tgtttgacatatgaaaatca 80 |||||||||||||||||||| Sbjct: 119965 tgtttgacatatgaaaatca 119946 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,410,577 Number of Sequences: 3902068 Number of extensions: 5410577 Number of successful extensions: 101794 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101486 Number of HSP's gapped (non-prelim): 295 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)