ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62o07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_472384.1| Oryza sativa (japonica cultivar-group), predic... 567 e-158
2ref|XM_466041.1| Oryza sativa (japonica cultivar-group), mRNA 444 e-121
3ref|XM_506818.1| PREDICTED Oryza sativa (japonica cultivar-group... 444 e-121
4dbj|AK066073.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121
5dbj|AK060822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 444 e-121
6dbj|AK067696.1| Oryza sativa (japonica cultivar-group) cDNA clon... 436 e-119
7ref|NM_123046.2| Arabidopsis thaliana catalytic AT5G36880 transc... 174 2e-40
8ref|NM_001036897.1| Arabidopsis thaliana catalytic AT5G36880 tra... 174 2e-40
9gb|AY045880.1| Arabidopsis thaliana putative acetyl-CoA syntheta... 174 2e-40
10gb|BT002371.1| Arabidopsis thaliana clone U10380 putative acetyl... 174 2e-40
11gb|AF036618.1|AF036618 Arabidopsis thaliana acetyl-CoA synthetas... 159 1e-35
12emb|X98506.1|STACS S.tuberosum mRNA for acetyl-CoA synthetase 157 5e-35
13emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 145 2e-31
14emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4,... 145 2e-31
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
17dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
18dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
19gb|AY104427.1| Zea mays PCO084078 mRNA sequence 113 7e-22
20dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 92 2e-15
21dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 66 1e-07
22gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete s... 52 0.002
23gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group ... 44 0.51
24ref|XM_784861.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.51
25emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 44 0.51
26emb|AL049644.1|SPCC191 S.pombe chromosome III cosmid c191 44 0.51
27gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, compl... 44 0.51
28gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, comp... 44 0.51
29ref|NM_001023281.1| Schizosaccharomyces pombe 972h- acetyl-coenz... 44 0.51
30dbj|D89121.1| Schizosaccharomyces pombe mRNA, partial cds, clone... 44 0.51
31gb|AC011292.3| Homo sapiens BAC clone RP11-69N1 from 7, complete... 42 2.0
32gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, comple... 42 2.0
33gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosom... 42 2.0
34emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; se... 42 2.0
35gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence 42 2.0
36ref|XM_683412.1| PREDICTED: Danio rerio similar to MGC80104 prot... 42 2.0
37gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 42 2.0
38gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome 42 2.0
39gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 42 2.0
40gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, com... 40 8.0
41gb|AC140482.2| Mus musculus BAC clone RP24-133E1 from chromosome... 40 8.0
42gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 8.0
43emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chro... 40 8.0
44gb|AC098612.3| Homo sapiens chromosome 8 clone RP11-409I21 map 8... 40 8.0
45gb|AC087343.4| Homo sapiens chromosome 8, clone RP11-734J24, com... 40 8.0
46gb|AC099514.2| Homo sapiens chromosome 5 clone RP11-454E7, compl... 40 8.0
47emb|BX323022.11| Zebrafish DNA sequence from clone DKEYP-77C1 in... 40 8.0
48gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosom... 40 8.0
49ref|XM_625127.1| PREDICTED: Apis mellifera similar to target of ... 40 8.0
50gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, co... 40 8.0
51gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Ca... 40 8.0
52emb|BX005449.4| Zebrafish DNA sequence from clone CH211-174A15 i... 40 8.0
53gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 8.0
54dbj|D00711.1|PELLBP Periplaneta americana mRNA for lipopolysacch... 40 8.0
55emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chro... 40 8.0
56gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome... 40 8.0

>ref|XM_472384.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1899

 Score =  567 bits (286), Expect = e-158
 Identities = 514/590 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    aagatatagtagatgcgtctctggttgaaagttcaaaaaatggtgtcacagtaggcattt 61
            ||||||||||||||| ||| |||| ||| ||| | || ||||| |||   ||||||||||
Sbjct: 533  aagatatagtagatgtgtcgctggctgacagtgcgaagaatggagtcgatgtaggcattt 592

                                                                        
Query: 62   gtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctggaa 121
             ||||||||| |||||||||  ||| ||||||| ||| |||||| ||||||   | || |
Sbjct: 593  ctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggacgtcaggca 652

                                                                        
Query: 122  gagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatggg 181
            |||| ||||||||||||||||||||||||||||| || || | |||||||||||||||||
Sbjct: 653  gagacgtttggtggcaggatgttgtgcccaattttccaacaaaatgtgatgtggaatggg 712

                                                                        
Query: 182  ttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
            | |||||||||||||||||||||||||| || || ||||| ||||||||||| |||||||
Sbjct: 713  tagatgcagaggatccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 772

                                                                        
Query: 242  gtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgcat 301
            ||||||||||||||||||| ||||||||||| ||  | |||||||||||||| || ||||
Sbjct: 773  gtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacgcat 832

                                                                        
Query: 302  ttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactggac 361
            ||||| |||| ||| |||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct: 833  ttgattacaagccatcagatatatactggtgcactgcagactgtgggtggattactgggc 892

                                                                        
Query: 362  atagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaagggg 421
            ||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 893  atagttatgtgacatatggtcctctcctgaatggagccacagttcttgtttacgaagggg 952

                                                                        
Query: 422  ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481
            |||||||||| ||||||||| |||| ||||||||| | ||||||||||||   ||||| |
Sbjct: 953  ctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgacga 1012

                                                                        
Query: 482  tattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgttg 541
            ||||||||||||||||||||||||| ||| |||| |||||||||||| ||| ||||||| 
Sbjct: 1013 tattttatactgcaccaacacttattcgtgcactcatgcgtgatggtaccgagtatgtta 1072

                                                              
Query: 542  atcggtcctctcgtaagtccctccgagttttaggaagtgtgggtgagcca 591
             |||||  |||||||| || || |||||| ||||||| || || ||||||
Sbjct: 1073 ctcggtattctcgtaaatctcttcgagttctaggaagcgtaggcgagcca 1122



to top

>ref|XM_466041.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2517

 Score =  444 bits (224), Expect = e-121
 Identities = 416/480 (86%)
 Strand = Plus / Plus

                                                                        
Query: 61   tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
            |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 913  tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 972

                                                                        
Query: 121  agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180
            || |||||||||||||||||||||||| ||| |||||| || |  || ||||| ||||||
Sbjct: 973  agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1032

                                                                        
Query: 181  gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240
            || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 1033 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1092

                                                                        
Query: 241  ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300
            ||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||||
Sbjct: 1093 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1152

                                                                        
Query: 301  tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360
            |||||| |||| ||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1212

                                                                        
Query: 361  catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420
            || || |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 1213 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1272

                                                                        
Query: 421  gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480
             ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 1273 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1332

                                                                        
Query: 481  atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540
            |||||||| ||||||||||||||  | || ||||| |||||||||||  ||| |||||||
Sbjct: 1333 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1392



to top

>ref|XM_506818.1| PREDICTED Oryza sativa (japonica cultivar-group), P0415B12.41 mRNA
          Length = 2763

 Score =  444 bits (224), Expect = e-121
 Identities = 416/480 (86%)
 Strand = Plus / Plus

                                                                        
Query: 61   tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
            |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 1165 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 1224

                                                                        
Query: 121  agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180
            || |||||||||||||||||||||||| ||| |||||| || |  || ||||| ||||||
Sbjct: 1225 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1284

                                                                        
Query: 181  gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240
            || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 1285 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1344

                                                                        
Query: 241  ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300
            ||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||||
Sbjct: 1345 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1404

                                                                        
Query: 301  tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360
            |||||| |||| ||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1464

                                                                        
Query: 361  catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420
            || || |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 1465 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1524

                                                                        
Query: 421  gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480
             ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 1525 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1584

                                                                        
Query: 481  atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540
            |||||||| ||||||||||||||  | || ||||| |||||||||||  ||| |||||||
Sbjct: 1585 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1644



to top

>dbj|AK066073.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058P13, full
            insert sequence
          Length = 2763

 Score =  444 bits (224), Expect = e-121
 Identities = 416/480 (86%)
 Strand = Plus / Plus

                                                                        
Query: 61   tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
            |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 1165 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 1224

                                                                        
Query: 121  agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180
            || |||||||||||||||||||||||| ||| |||||| || |  || ||||| ||||||
Sbjct: 1225 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1284

                                                                        
Query: 181  gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240
            || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 1285 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1344

                                                                        
Query: 241  ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300
            ||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||||
Sbjct: 1345 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1404

                                                                        
Query: 301  tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360
            |||||| |||| ||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1464

                                                                        
Query: 361  catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420
            || || |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 1465 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1524

                                                                        
Query: 421  gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480
             ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 1525 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1584

                                                                        
Query: 481  atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540
            |||||||| ||||||||||||||  | || ||||| |||||||||||  ||| |||||||
Sbjct: 1585 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1644



to top

>dbj|AK060822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B02, full
           insert sequence
          Length = 1625

 Score =  444 bits (224), Expect = e-121
 Identities = 416/480 (86%)
 Strand = Plus / Plus

                                                                       
Query: 61  tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
           |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 53  tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 112

                                                                       
Query: 121 agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180
           || |||||||||||||||||||||||| ||| |||||| || |  || ||||| ||||||
Sbjct: 113 agggatgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 172

                                                                       
Query: 181 gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240
           || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 173 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 232

                                                                       
Query: 241 ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300
           ||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||||
Sbjct: 233 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 292

                                                                       
Query: 301 tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360
           |||||| |||| ||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 352

                                                                       
Query: 361 catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420
           || || |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 353 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 412

                                                                       
Query: 421 gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480
            ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 413 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 472

                                                                       
Query: 481 atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540
           |||||||| ||||||||||||||  | || ||||| |||||||||||  ||| |||||||
Sbjct: 473 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 532



to top

>dbj|AK067696.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F19, full
            insert sequence
          Length = 2516

 Score =  436 bits (220), Expect = e-119
 Identities = 415/480 (86%)
 Strand = Plus / Plus

                                                                        
Query: 61   tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
            |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 912  tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 971

                                                                        
Query: 121  agagatgtttggtggcaggatgttgtgcccaatttccctactagatgtgatgtggaatgg 180
            || | |||||||||||||||||||||| ||| |||||| || |  || ||||| ||||||
Sbjct: 972  aggggtgtttggtggcaggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgg 1031

                                                                        
Query: 181  gttgatgcagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaag 240
            || ||||||||||| |||||||| ||||||||||| |||||||| |||||||| ||||||
Sbjct: 1032 gtggatgcagaggacccattgttccttctgtacacaagtggcagtacaggaaagccaaag 1091

                                                                        
Query: 241  ggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatgca 300
            ||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||||
Sbjct: 1092 ggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatgca 1151

                                                                        
Query: 301  tttgatcacaaaccaacagacatatactggtgcactgcagactgtggctggattactgga 360
            |||||| |||| ||  | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 tttgattacaagccgtcggacatatactggtgcactgcagactgtggctggattactgga 1211

                                                                        
Query: 361  catagttatgtgacttatggtcctctcctgaatggagccacagttctcgtttatgaaggg 420
            || || |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 1212 cacagctatgtgacgtatggtccactcctgaatggagcaacagttctcgtttttgaaggg 1271

                                                                        
Query: 421  gctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgaca 480
             ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| ||||||
Sbjct: 1272 actccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgaca 1331

                                                                        
Query: 481  atattttatactgcaccaacacttatccgttcacttatgcgtgatggttccgtgtatgtt 540
            |||||||| ||||||||||||||  | || ||||| |||||||||||  ||| |||||||
Sbjct: 1332 atattttacactgcaccaacactcgttcgatcactcatgcgtgatggcaccgagtatgtt 1391



to top

>ref|NM_123046.2| Arabidopsis thaliana catalytic AT5G36880 transcript variant
            AT5G36880.1 mRNA, complete cds
          Length = 2521

 Score =  174 bits (88), Expect = 2e-40
 Identities = 274/336 (81%)
 Strand = Plus / Plus

                                                                        
Query: 166  tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225
            ||||| |||||||||||||||||||| |||||  ||||| | || ||||| ||||| || 
Sbjct: 1058 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 1117

                                                                        
Query: 226  acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285
            || || || |||||||||||  | || ||||| || || |||||| | ||  | || |||
Sbjct: 1118 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1177

                                                                        
Query: 286  acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345
            || || ||| ||||||||||  ||||| |||||||  |||||||||| || ||||| |||
Sbjct: 1178 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1237

                                                                        
Query: 346  ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405
            || ||||| ||||| ||||| ||||| |||||||| ||  | || ||||||||||| |||
Sbjct: 1238 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1297

                                                                        
Query: 406  ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465
             | || | ||| |||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 1298 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1357

                                                
Query: 466  aaatacaaagtgacaatattttatactgcaccaaca 501
            |||||||| ||  |||||||||||||||| ||||||
Sbjct: 1358 aaatacaaggtttcaatattttatactgccccaaca 1393



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 117  tggaagagatgtttggtggcaggatgtt 144
            |||||||||||| |||||||||||||||
Sbjct: 1009 tggaagagatgtgtggtggcaggatgtt 1036



to top

>ref|NM_001036897.1| Arabidopsis thaliana catalytic AT5G36880 transcript variant
            AT5G36880.2 mRNA, complete cds
          Length = 2570

 Score =  174 bits (88), Expect = 2e-40
 Identities = 274/336 (81%)
 Strand = Plus / Plus

                                                                        
Query: 166  tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225
            ||||| |||||||||||||||||||| |||||  ||||| | || ||||| ||||| || 
Sbjct: 1020 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 1079

                                                                        
Query: 226  acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285
            || || || |||||||||||  | || ||||| || || |||||| | ||  | || |||
Sbjct: 1080 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1139

                                                                        
Query: 286  acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345
            || || ||| ||||||||||  ||||| |||||||  |||||||||| || ||||| |||
Sbjct: 1140 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1199

                                                                        
Query: 346  ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405
            || ||||| ||||| ||||| ||||| |||||||| ||  | || ||||||||||| |||
Sbjct: 1200 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1259

                                                                        
Query: 406  ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465
             | || | ||| |||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 1260 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1319

                                                
Query: 466  aaatacaaagtgacaatattttatactgcaccaaca 501
            |||||||| ||  |||||||||||||||| ||||||
Sbjct: 1320 aaatacaaggtttcaatattttatactgccccaaca 1355



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 117 tggaagagatgtttggtggcaggatgtt 144
           |||||||||||| |||||||||||||||
Sbjct: 971 tggaagagatgtgtggtggcaggatgtt 998



to top

>gb|AY045880.1| Arabidopsis thaliana putative acetyl-CoA synthetase (At5g36880) mRNA,
            complete cds
          Length = 2454

 Score =  174 bits (88), Expect = 2e-40
 Identities = 274/336 (81%)
 Strand = Plus / Plus

                                                                        
Query: 166  tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225
            ||||| |||||||||||||||||||| |||||  ||||| | || ||||| ||||| || 
Sbjct: 1058 tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 1117

                                                                        
Query: 226  acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285
            || || || |||||||||||  | || ||||| || || |||||| | ||  | || |||
Sbjct: 1118 actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1177

                                                                        
Query: 286  acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345
            || || ||| ||||||||||  ||||| |||||||  |||||||||| || ||||| |||
Sbjct: 1178 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1237

                                                                        
Query: 346  ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405
            || ||||| ||||| ||||| ||||| |||||||| ||  | || ||||||||||| |||
Sbjct: 1238 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1297

                                                                        
Query: 406  ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465
             | || | ||| |||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 1298 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1357

                                                
Query: 466  aaatacaaagtgacaatattttatactgcaccaaca 501
            |||||||| ||  |||||||||||||||| ||||||
Sbjct: 1358 aaatacaaggtttcaatattttatactgccccaaca 1393



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 117  tggaagagatgtttggtggcaggatgtt 144
            |||||||||||| |||||||||||||||
Sbjct: 1009 tggaagagatgtgtggtggcaggatgtt 1036



to top

>gb|BT002371.1| Arabidopsis thaliana clone U10380 putative acetyl-CoA synthetase
            (At5g36880) mRNA, complete cds
          Length = 2113

 Score =  174 bits (88), Expect = 2e-40
 Identities = 274/336 (81%)
 Strand = Plus / Plus

                                                                        
Query: 166  tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225
            ||||| |||||||||||||||||||| |||||  ||||| | || ||||| ||||| || 
Sbjct: 880  tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 939

                                                                        
Query: 226  acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285
            || || || |||||||||||  | || ||||| || || |||||| | ||  | || |||
Sbjct: 940  actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 999

                                                                        
Query: 286  acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345
            || || ||| ||||||||||  ||||| |||||||  |||||||||| || ||||| |||
Sbjct: 1000 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1059

                                                                        
Query: 346  ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405
            || ||||| ||||| ||||| ||||| |||||||| ||  | || ||||||||||| |||
Sbjct: 1060 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1119

                                                                        
Query: 406  ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465
             | || | ||| |||||||||||||||||||| ||||| || |||||||| || ||||||
Sbjct: 1120 gttgtctttgagggggctccaaactaccctgaccctggacgctgttgggatattgttgac 1179

                                                
Query: 466  aaatacaaagtgacaatattttatactgcaccaaca 501
            |||||||| ||  |||||||||||||||| ||||||
Sbjct: 1180 aaatacaaggtttcaatattttatactgccccaaca 1215



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 117 tggaagagatgtttggtggcaggatgtt 144
           |||||||||||| |||||||||||||||
Sbjct: 831 tggaagagatgtgtggtggcaggatgtt 858



to top

>gb|AF036618.1|AF036618 Arabidopsis thaliana acetyl-CoA synthetase mRNA, complete cds
          Length = 2382

 Score =  159 bits (80), Expect = 1e-35
 Identities = 272/336 (80%)
 Strand = Plus / Plus

                                                                        
Query: 166  tgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagc 225
            ||||| |||||||||||||||||||| |||||  ||||| | || ||||| ||||| || 
Sbjct: 923  tgtgaggtggaatgggttgatgcagaagatcccctgtttttgctctacaccagtggaagt 982

                                                                        
Query: 226  acaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaaca 285
            || || || |||||||||||  | || ||||| || || |||||| | ||  | || |||
Sbjct: 983  actgggaagccaaagggtgtcctacacacaactggagggtatatgatctacactgctaca 1042

                                                                        
Query: 286  acatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactgt 345
            || || ||| ||||||||||  ||||| |||||||  |||||||||| || ||||| |||
Sbjct: 1043 acgttcaaatatgcatttgactacaaatcaacagatgtatactggtgtacagcagattgt 1102

                                                                        
Query: 346  ggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagtt 405
            || ||||| ||||| ||||| ||||| |||||||| ||  | || ||||||||||| |||
Sbjct: 1103 ggttggataactggccatagctatgttacttatggaccaatgcttaatggagccactgtt 1162

                                                                        
Query: 406  ctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttgac 465
             | ||   ||| |||||||||||||||||||| ||||| || ||| |||| || ||||||
Sbjct: 1163 gttgtccttgagggggctccaaactaccctgaccctggacgctgtcgggatattgttgac 1222

                                                
Query: 466  aaatacaaagtgacaatattttatactgcaccaaca 501
            |||||||| ||  |||||||||||||||| ||||||
Sbjct: 1223 aaatacaaggtttcaatattttatactgccccaaca 1258



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 117 tggaagagatgtttggtggcaggatgtt 144
           |||||||||||| |||||||||||||||
Sbjct: 874 tggaagagatgtgtggtggcaggatgtt 901



to top

>emb|X98506.1|STACS S.tuberosum mRNA for acetyl-CoA synthetase
          Length = 2383

 Score =  157 bits (79), Expect = 5e-35
 Identities = 274/339 (80%)
 Strand = Plus / Plus

                                                                        
Query: 165  atgtgatgtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcag 224
            |||||||||||| |||||||||||||| |||||  | || || || ||||||||||| ||
Sbjct: 963  atgtgatgtggagtgggttgatgcagaagatccccttttcctgctttacactagtgggag 1022

                                                                        
Query: 225  cacaggaaaaccaaagggtgtattgcatacaacggggggctatatggtatatgccgcaac 284
             || ||||| || |||||||| |||||||||||||| || |||||||| ||  | || ||
Sbjct: 1023 taccggaaagcctaagggtgtcttgcatacaacgggaggatatatggtgtacactgctac 1082

                                                                        
Query: 285  aacatttaaacatgcatttgatcacaaaccaacagacatatactggtgcactgcagactg 344
             ||||| ||  ||||||||||  |||| || ||||||||||| ||||| || || |||||
Sbjct: 1083 tacattcaagtatgcatttgactacaagccgacagacatatattggtgtacagctgactg 1142

                                                                        
Query: 345  tggctggattactggacatagttatgtgacttatggtcctctcctgaatggagccacagt 404
            ||| ||||||||||| ||||||||||| || ||||| ||| | || |||||||| || ||
Sbjct: 1143 tggttggattactgggcatagttatgtaacctatggacctttgctaaatggagcaactgt 1202

                                                                        
Query: 405  tctcgtttatgaaggggctccaaactaccctgatcctggtcggtgttgggacatcgttga 464
            | | |||| ||||||||| ||||| || || |||   || || |||||||| || |||||
Sbjct: 1203 tgtggtttttgaaggggccccaaattatcccgatgtcgggcgttgttgggatattgttga 1262

                                                   
Query: 465  caaatacaaagtgacaatattttatactgcaccaacact 503
             || || || ||  ||||||||||||| || ||||||||
Sbjct: 1263 taagtataaggtttcaatattttatacagctccaacact 1301



to top

>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
             complete sequence
          Length = 112404

 Score =  145 bits (73), Expect = 2e-31
 Identities = 88/93 (94%)
 Strand = Plus / Plus

                                                                         
Query: 329   ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388
             ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 58928 ggtgcactgcagactgtgggtggattactgggcatagttatgtgacatatggtcctctcc 58987

                                              
Query: 389   tgaatggagccacagttctcgtttatgaagggg 421
             ||||||||||||||||||| ||||| |||||||
Sbjct: 58988 tgaatggagccacagttcttgtttacgaagggg 59020



 Score =  131 bits (66), Expect = 3e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                         
Query: 136   caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195
             |||||||||||||||||||| || || | |||||||||||||||||| ||||||||||||
Sbjct: 58542 caggatgttgtgcccaattttccaacaaaatgtgatgtggaatgggtagatgcagaggat 58601

                                                           
Query: 196   ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
             |||||||||||||| || || ||||| ||||||||||| |||||||
Sbjct: 58602 ccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 58647



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                         
Query: 420   ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479
             |||||||||||| ||||||||| |||| ||||||||| | ||||||||||||   |||||
Sbjct: 59149 ggctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgac 59208

                                                              
Query: 480   aatattttatactgcaccaacacttatccgttcacttatgcgtgatggt 528
              |||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 59209 gatattttatactgcaccaacacttattcgtgcactcatgcgtgatggt 59257



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                         
Query: 239   agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298
             |||||||||||||||||||||| ||||||||||| ||  | |||||||||||||| || |
Sbjct: 58721 agggtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacg 58780

                                              
Query: 299   catttgatcacaaaccaacagacatatactggt 331
             |||||||| |||| ||| |||| ||||||||||
Sbjct: 58781 catttgattacaagccatcagatatatactggt 58813



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 54    aggcatttgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggat 113
             |||||||| ||||||||| |||||||||  ||| ||||||| ||| |||||| |||||| 
Sbjct: 58286 aggcatttctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggac 58345

                                       
Query: 114   agctggaagagatgtttggtggcagg 139
               | || ||||| |||||||||||||
Sbjct: 58346 gtcaggcagagacgtttggtggcagg 58371



to top

>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14,
              complete sequence
          Length = 158312

 Score =  145 bits (73), Expect = 2e-31
 Identities = 88/93 (94%)
 Strand = Plus / Plus

                                                                          
Query: 329    ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388
              ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 151687 ggtgcactgcagactgtgggtggattactgggcatagttatgtgacatatggtcctctcc 151746

                                               
Query: 389    tgaatggagccacagttctcgtttatgaagggg 421
              ||||||||||||||||||| ||||| |||||||
Sbjct: 151747 tgaatggagccacagttcttgtttacgaagggg 151779



 Score =  131 bits (66), Expect = 3e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                          
Query: 136    caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195
              |||||||||||||||||||| || || | |||||||||||||||||| ||||||||||||
Sbjct: 151301 caggatgttgtgcccaattttccaacaaaatgtgatgtggaatgggtagatgcagaggat 151360

                                                            
Query: 196    ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
              |||||||||||||| || || ||||| ||||||||||| |||||||
Sbjct: 151361 ccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 151406



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                          
Query: 420    ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479
              |||||||||||| ||||||||| |||| ||||||||| | ||||||||||||   |||||
Sbjct: 151908 ggctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgac 151967

                                                               
Query: 480    aatattttatactgcaccaacacttatccgttcacttatgcgtgatggt 528
               |||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 151968 gatattttatactgcaccaacacttattcgtgcactcatgcgtgatggt 152016



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                          
Query: 239    agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298
              |||||||||||||||||||||| ||||||||||| ||  | |||||||||||||| || |
Sbjct: 151480 agggtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacg 151539

                                               
Query: 299    catttgatcacaaaccaacagacatatactggt 331
              |||||||| |||| ||| |||| ||||||||||
Sbjct: 151540 catttgattacaagccatcagatatatactggt 151572



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                          
Query: 54     aggcatttgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggat 113
              |||||||| ||||||||| |||||||||  ||| ||||||| ||| |||||| |||||| 
Sbjct: 151045 aggcatttctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggac 151104

                                        
Query: 114    agctggaagagatgtttggtggcagg 139
                | || ||||| |||||||||||||
Sbjct: 151105 gtcaggcagagacgtttggtggcagg 151130



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  145 bits (73), Expect = 2e-31
 Identities = 88/93 (94%)
 Strand = Plus / Plus

                                                                            
Query: 329      ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388
                ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 20089024 ggtgcactgcagactgtgggtggattactgggcatagttatgtgacatatggtcctctcc 20089083

                                                 
Query: 389      tgaatggagccacagttctcgtttatgaagggg 421
                ||||||||||||||||||| ||||| |||||||
Sbjct: 20089084 tgaatggagccacagttcttgtttacgaagggg 20089116



 Score =  131 bits (66), Expect = 3e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                            
Query: 136      caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195
                |||||||||||||||||||| || || | |||||||||||||||||| ||||||||||||
Sbjct: 20088638 caggatgttgtgcccaattttccaacaaaatgtgatgtggaatgggtagatgcagaggat 20088697

                                                              
Query: 196      ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
                |||||||||||||| || || ||||| ||||||||||| |||||||
Sbjct: 20088698 ccattgtttcttctatatacaagtggtagcacaggaaagccaaagg 20088743



 Score =  121 bits (61), Expect = 3e-24
 Identities = 97/109 (88%)
 Strand = Plus / Plus

                                                                            
Query: 420      ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479
                |||||||||||| ||||||||| |||| ||||||||| | ||||||||||||   |||||
Sbjct: 20089245 ggctccaaactatcctgatcctagtcgttgttgggacgttgttgacaaatacggggtgac 20089304

                                                                 
Query: 480      aatattttatactgcaccaacacttatccgttcacttatgcgtgatggt 528
                 |||||||||||||||||||||||||| ||| |||| ||||||||||||
Sbjct: 20089305 gatattttatactgcaccaacacttattcgtgcactcatgcgtgatggt 20089353



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                            
Query: 239      agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298
                |||||||||||||||||||||| ||||||||||| ||  | |||||||||||||| || |
Sbjct: 20088817 agggtgtattgcatacaacgggaggctatatggtgtactctgcaacaacatttaagcacg 20088876

                                                 
Query: 299      catttgatcacaaaccaacagacatatactggt 331
                |||||||| |||| ||| |||| ||||||||||
Sbjct: 20088877 catttgattacaagccatcagatatatactggt 20088909



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 54       aggcatttgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggat 113
                |||||||| ||||||||| |||||||||  ||| ||||||| ||| |||||| |||||| 
Sbjct: 20088382 aggcatttctttgacatacgaaaatcagtcggcaatgaagagagaagacacaaaatggac 20088441

                                          
Query: 114      agctggaagagatgtttggtggcagg 139
                  | || ||||| |||||||||||||
Sbjct: 20088442 gtcaggcagagacgtttggtggcagg 20088467



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                            
Query: 329      ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388
                |||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 19241316 ggtgcactgcagactgtggctggattactggacacagctatgtgacgtatggtccactcc 19241375

                                                 
Query: 389      tgaatggagccacagttctcgtttatgaagggg 421
                |||||||||| ||||||||||||| ||||||||
Sbjct: 19241376 tgaatggagcaacagttctcgtttttgaagggg 19241408



 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                            
Query: 422      ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481
                ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||||
Sbjct: 19241735 ctccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgacaa 19241794

                                                              
Query: 482      tattttatactgcaccaacacttatccgttcacttatgcgtgatgg 527
                ||||||| ||||||||||||||  | || ||||| |||||||||||
Sbjct: 19241795 tattttacactgcaccaacactcgttcgatcactcatgcgtgatgg 19241840



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                            
Query: 136      caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195
                |||||||||||| ||| |||||| || |  || ||||| |||||||| ||||||||||| 
Sbjct: 19240914 caggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgggtggatgcagaggac 19240973

                                                              
Query: 196      ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
                |||||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 19240974 ccattgttccttctgtacacaagtggcagtacaggaaagccaaagg 19241019



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                            
Query: 61       tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
                |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 19240705 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 19240764

                                   
Query: 121      agagatgtttggtggcagg 139
                || ||||||||||||||||
Sbjct: 19240765 agggatgtttggtggcagg 19240783



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                            
Query: 239      agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298
                ||||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||
Sbjct: 19241102 agggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatg 19241161

                                                 
Query: 299      catttgatcacaaaccaacagacatatactggt 331
                |||||||| |||| ||  | |||||||||||||
Sbjct: 19241162 catttgattacaagccgtcggacatatactggt 19241194



to top

>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0458B05
          Length = 144917

 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                        
Query: 329  ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388
            |||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 9114 ggtgcactgcagactgtggctggattactggacacagctatgtgacgtatggtccactcc 9173

                                             
Query: 389  tgaatggagccacagttctcgtttatgaagggg 421
            |||||||||| ||||||||||||| ||||||||
Sbjct: 9174 tgaatggagcaacagttctcgtttttgaagggg 9206



 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                        
Query: 422  ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481
            ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||||
Sbjct: 9533 ctccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgacaa 9592

                                                          
Query: 482  tattttatactgcaccaacacttatccgttcacttatgcgtgatgg 527
            ||||||| ||||||||||||||  | || ||||| |||||||||||
Sbjct: 9593 tattttacactgcaccaacactcgttcgatcactcatgcgtgatgg 9638



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                        
Query: 136  caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195
            |||||||||||| ||| |||||| || |  || ||||| |||||||| ||||||||||| 
Sbjct: 8712 caggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgggtggatgcagaggac 8771

                                                          
Query: 196  ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
            |||||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 8772 ccattgttccttctgtacacaagtggcagtacaggaaagccaaagg 8817



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                        
Query: 61   tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
            |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 8503 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 8562

                               
Query: 121  agagatgtttggtggcagg 139
            || ||||||||||||||||
Sbjct: 8563 agggatgtttggtggcagg 8581



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                        
Query: 239  agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298
            ||||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||
Sbjct: 8900 agggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatg 8959

                                             
Query: 299  catttgatcacaaaccaacagacatatactggt 331
            |||||||| |||| ||  | |||||||||||||
Sbjct: 8960 catttgattacaagccgtcggacatatactggt 8992



to top

>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0415B12
          Length = 157419

 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                          
Query: 329    ggtgcactgcagactgtggctggattactggacatagttatgtgacttatggtcctctcc 388
              |||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||
Sbjct: 139565 ggtgcactgcagactgtggctggattactggacacagctatgtgacgtatggtccactcc 139624

                                               
Query: 389    tgaatggagccacagttctcgtttatgaagggg 421
              |||||||||| ||||||||||||| ||||||||
Sbjct: 139625 tgaatggagcaacagttctcgtttttgaagggg 139657



 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                          
Query: 422    ctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgacaa 481
              ||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||||||
Sbjct: 139984 ctccaaattaccctgattctggtcggtgctgggacattgtggacaagtacaaggtgacaa 140043

                                                            
Query: 482    tattttatactgcaccaacacttatccgttcacttatgcgtgatgg 527
              ||||||| ||||||||||||||  | || ||||| |||||||||||
Sbjct: 140044 tattttacactgcaccaacactcgttcgatcactcatgcgtgatgg 140089



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                          
Query: 136    caggatgttgtgcccaatttccctactagatgtgatgtggaatgggttgatgcagaggat 195
              |||||||||||| ||| |||||| || |  || ||||| |||||||| ||||||||||| 
Sbjct: 139163 caggatgttgtgaccagtttcccaaccaagtgcgatgtagaatgggtggatgcagaggac 139222

                                                            
Query: 196    ccattgtttcttctgtacactagtggcagcacaggaaaaccaaagg 241
              |||||||| ||||||||||| |||||||| |||||||| |||||||
Sbjct: 139223 ccattgttccttctgtacacaagtggcagtacaggaaagccaaagg 139268



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                          
Query: 61     tgtttgacatatgaaaatcagctggccatgaagaaagaggacacacaatggatagctgga 120
              |||||||||||||||||||||   || ||||||| ||| |||||| |||||  ||| |||
Sbjct: 138954 tgtttgacatatgaaaatcagtcagcaatgaagagagaagacacaaaatggcaagcagga 139013

                                 
Query: 121    agagatgtttggtggcagg 139
              || ||||||||||||||||
Sbjct: 139014 agggatgtttggtggcagg 139032



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 77/93 (82%)
 Strand = Plus / Plus

                                                                          
Query: 239    agggtgtattgcatacaacggggggctatatggtatatgccgcaacaacatttaaacatg 298
              ||||||| |||||||| || |||||||| ||||| ||    ||||||||||||||  |||
Sbjct: 139351 agggtgtgttgcatactactgggggctacatggtttacagtgcaacaacatttaagtatg 139410

                                               
Query: 299    catttgatcacaaaccaacagacatatactggt 331
              |||||||| |||| ||  | |||||||||||||
Sbjct: 139411 catttgattacaagccgtcggacatatactggt 139443



to top

>gb|AY104427.1| Zea mays PCO084078 mRNA sequence
          Length = 1245

 Score =  113 bits (57), Expect = 7e-22
 Identities = 168/205 (81%)
 Strand = Plus / Plus

                                                                       
Query: 387 cctgaatggagccacagttctcgtttatgaaggggctccaaactaccctgatcctggtcg 446
           ||||||||| || || |||||||||| ||||||| | || |||||||||||| | || ||
Sbjct: 1   cctgaatggtgctacggttctcgtttttgaagggacgccgaactaccctgattcgggccg 60

                                                                       
Query: 447 gtgttgggacatcgttgacaaatacaaagtgacaatattttatactgcaccaacacttat 506
            || ||||| || || ||||| ||||| |||||||||||||||||||| ||||| ||| |
Sbjct: 61  atgctgggatattgtggacaagtacaatgtgacaatattttatactgccccaactcttgt 120

                                                                       
Query: 507 ccgttcacttatgcgtgatggttccgtgtatgttgatcggtcctctcgtaagtccctccg 566
            |||||||| |||||||||||  | | |||||||   || | |||||| ||||| |||||
Sbjct: 121 tcgttcactcatgcgtgatggcactgagtatgttacacgttactctcgaaagtctctccg 180

                                    
Query: 567 agttttaggaagtgtgggtgagcca 591
           |||  | |||||||| |||||||||
Sbjct: 181 agtcctgggaagtgttggtgagcca 205



to top

>dbj|AB025605.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F5H8
          Length = 70098

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 420   ggctccaaactaccctgatcctggtcggtgttgggacatcgttgacaaatacaaagtgac 479
             |||||||||||||||||| ||||| || |||||||| || |||||||||||||| ||  |
Sbjct: 66833 ggctccaaactaccctgaccctggacgctgttgggatattgttgacaaatacaaggtttc 66774

                                   
Query: 480   aatattttatactgcaccaaca 501
             ||||||||||||||| ||||||
Sbjct: 66773 aatattttatactgccccaaca 66752



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 166   tgtgatgtggaatgggttgatgcagaggatcc 197
             ||||| |||||||||||||||||||| |||||
Sbjct: 67428 tgtgaggtggaatgggttgatgcagaagatcc 67397



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 337   gcagactgtggctggattactggacatagttatgtgacttatggtcctctcctgaatgga 396
             ||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||  | || ||||||
Sbjct: 67090 gcagattgtggttggataactggccatagctatgttacttatggaccaatgcttaatgga 67031

                  
Query: 397   gccac 401
             |||||
Sbjct: 67030 gccac 67026



to top

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                               
Query: 225    cacaggaaaaccaaagggtgtattgcatacaacggggggctatatggta 273
              |||||||||||| ||||||||| | ||||| ||||||||||||||||||
Sbjct: 578158 cacaggaaaacccaagggtgtagtccataccacggggggctatatggta 578110



to top

>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence
          Length = 122801

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 172   gtggaatgggttgatgcagaggatccattgtttcttctgtacactagtggcagcacagga 231
             ||||| ||| ||||||||||||||||| | ||||| || || |||||||| || || |||
Sbjct: 42146 gtggagtggcttgatgcagaggatccactttttctactctatactagtggaagtaccgga 42205

                       
Query: 232   aaaccaaagg 241
             ||||| ||||
Sbjct: 42206 aaacctaagg 42215



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 265   tatatggtatatgccgcaacaacatttaaacatgcatttgatcacaaaccaacagacata 324
             |||||||||||  | ||||||||||||||  ||||||||||  |||| ||| | ||||| 
Sbjct: 42334 tatatggtatacactgcaacaacatttaagtatgcatttgactacaagccatctgacatc 42393

                    
Query: 325   tactggt 331
             |||||||
Sbjct: 42394 tactggt 42400



to top

>gb|AY436590.1| Homo sapiens nuclear receptor subfamily 3, group C, member 1
             (glucocorticoid receptor) (NR3C1) gene, complete cds
          Length = 127687

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 59    tttgtttgacatatgaaaatca 80
             ||||||||||||||||||||||
Sbjct: 38206 tttgtttgacatatgaaaatca 38185



to top

>ref|XM_784861.1| PREDICTED: Strongylocentrotus purpuratus similar to acetyl-CoA
           synthetase 2-like (LOC585020), partial mRNA
          Length = 952

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 346 ggctggattactggacatagttatgtgacttatggtcctctc 387
           ||||||||||||||||| || |||||   |||||||||||||
Sbjct: 388 ggctggattactggacacagctatgtcgtttatggtcctctc 429



to top

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 346     ggctggattactggacatagttatgtgacttatggtcc 383
               ||||||||||| || ||||||||| ||| |||||||||
Sbjct: 3401364 ggctggattacaggtcatagttatctgatttatggtcc 3401327



to top

>emb|AL049644.1|SPCC191 S.pombe chromosome III cosmid c191
          Length = 25000

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 188  cagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagggtgt 245
            ||||| |||| ||||| ||||| ||||||  ||| || ||||||||||| ||||||||
Sbjct: 5239 cagagcatcccttgttccttctctacacttctggaagtacaggaaaacccaagggtgt 5182



to top

>gb|AC091925.3| Homo sapiens chromosome 5 clone RP11-278J6, complete sequence
          Length = 164668

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 59    tttgtttgacatatgaaaatca 80
             ||||||||||||||||||||||
Sbjct: 84878 tttgtttgacatatgaaaatca 84899



to top

>gb|AC012634.8| Homo sapiens chromosome 5 clone CTD-2185H17, complete sequence
          Length = 237712

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 59    tttgtttgacatatgaaaatca 80
             ||||||||||||||||||||||
Sbjct: 16052 tttgtttgacatatgaaaatca 16031



to top

>ref|NM_001023281.1| Schizosaccharomyces pombe 972h- acetyl-coenzyme A synthetase
           (SPCC417.14c), partial mRNA
          Length = 1989

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 cagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagggtgt 245
           ||||| |||| ||||| ||||| ||||||  ||| || ||||||||||| ||||||||
Sbjct: 791 cagagcatcccttgttccttctctacacttctggaagtacaggaaaacccaagggtgt 848



to top

>dbj|D89121.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 0447
          Length = 1864

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 188 cagaggatccattgtttcttctgtacactagtggcagcacaggaaaaccaaagggtgt 245
           ||||| |||| ||||| ||||| ||||||  ||| || ||||||||||| ||||||||
Sbjct: 503 cagagcatcccttgttccttctctacacttctggaagtacaggaaaacccaagggtgt 560



to top

>gb|AC011292.3| Homo sapiens BAC clone RP11-69N1 from 7, complete sequence
          Length = 107137

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 376  tatggtcctctcctgaatggagcca 400
            |||||||||| ||||||||||||||
Sbjct: 5673 tatggtcctcacctgaatggagcca 5649



to top

>gb|AC145906.2| Pan troglodytes BAC clone RP43-9J5 from 7, complete sequence
          Length = 220120

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 376    tatggtcctctcctgaatggagcca 400
              |||||||||| ||||||||||||||
Sbjct: 213293 tatggtcctcacctgaatggagcca 213317



to top

>gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosome 12, complete
             sequence
          Length = 174908

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 472   aaagtgacaatattttatact 492
             |||||||||||||||||||||
Sbjct: 36241 aaagtgacaatattttatact 36261



to top

>emb|BX572091.1| Prochlorococcus marinus MED4 complete genome; segment 2/5
          Length = 349082

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 349    tggattactggacatagttat 369
              |||||||||||||||||||||
Sbjct: 240965 tggattactggacatagttat 240985



to top

>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence
          Length = 172715

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 170   atgtggaatgggttgatgcagagga 194
             ||||| |||||||||||||||||||
Sbjct: 22059 atgtgaaatgggttgatgcagagga 22035



to top

>ref|XM_683412.1| PREDICTED: Danio rerio similar to MGC80104 protein (LOC560020),
           partial mRNA
          Length = 1130

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 325 tactggtgcactgcagactgtggctggat 353
           ||||||||||||||||||  |||||||||
Sbjct: 305 tactggtgcactgcagacattggctggat 333



to top

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 319     gacatatactggtgcactgcagactgtggctggattactgg 359
               ||||| |||||||||||||| |||   ||||||||||||||
Sbjct: 2145034 gacatctactggtgcactgccgacatcggctggattactgg 2145074



to top

>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 217   agtggcagcacaggaaaaccaaagg 241
             |||||||||||||| ||||||||||
Sbjct: 92473 agtggcagcacaggcaaaccaaagg 92449



to top

>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 319     gacatatactggtgcactgcagactgtggctggattactgg 359
               ||||| |||||||||||||| |||   ||||||||||||||
Sbjct: 1516887 gacatctactggtgcactgccgacatcggctggattactgg 1516927



to top

>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence
          Length = 185353

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    gtgacttatggtcctctcct 389
              ||||||||||||||||||||
Sbjct: 105522 gtgacttatggtcctctcct 105541



to top

>gb|AC140482.2| Mus musculus BAC clone RP24-133E1 from chromosome 10, complete sequence
          Length = 154925

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   catttaaacatgcatttgat 306
             ||||||||||||||||||||
Sbjct: 13360 catttaaacatgcatttgat 13379



to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 349     tggattactggacatagtta 368
               ||||||||||||||||||||
Sbjct: 1488069 tggattactggacatagtta 1488050



to top

>emb|AL445704.18| Human DNA sequence from clone RP11-99F4 on chromosome 1 Contains the 5'
              end of a novel gene (FLJ40773) and a CpG island, complete
              sequence
          Length = 163621

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    tggtcctctcctgaatggag 397
              ||||||||||||||||||||
Sbjct: 112248 tggtcctctcctgaatggag 112229



to top

>gb|AC098612.3| Homo sapiens chromosome 8 clone RP11-409I21 map 8p21-p11, complete
            sequence
          Length = 147588

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 291  taaacatgcatttgatcacaaaccaacagaca 322
            |||||||||||||||||| ||| ||| |||||
Sbjct: 1901 taaacatgcatttgatcagaaaacaatagaca 1870



to top

>gb|AC087343.4| Homo sapiens chromosome 8, clone RP11-734J24, complete sequence
          Length = 54346

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 291  taaacatgcatttgatcacaaaccaacagaca 322
            |||||||||||||||||| ||| ||| |||||
Sbjct: 3274 taaacatgcatttgatcagaaaacaatagaca 3305



to top

>gb|AC099514.2| Homo sapiens chromosome 5 clone RP11-454E7, complete sequence
          Length = 181674

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    caacatttaaacatgcattt 303
              ||||||||||||||||||||
Sbjct: 110546 caacatttaaacatgcattt 110527



to top

>emb|BX323022.11| Zebrafish DNA sequence from clone DKEYP-77C1 in linkage group 10,
             complete sequence
          Length = 145324

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   aacatttaaacatgcatttg 304
             ||||||||||||||||||||
Sbjct: 14390 aacatttaaacatgcatttg 14371



to top

>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence
          Length = 133079

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tgtttgacatatgaaaatca 80
             ||||||||||||||||||||
Sbjct: 46658 tgtttgacatatgaaaatca 46639



to top

>ref|XM_625127.1| PREDICTED: Apis mellifera similar to target of rapamycin
           (LOC409393), mRNA
          Length = 7329

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  agttcaaaaaatggtgtcac 50
           ||||||||||||||||||||
Sbjct: 533 agttcaaaaaatggtgtcac 514



to top

>gb|AC129951.9| Mus musculus chromosome 15, clone RP23-127B14, complete sequence
          Length = 211987

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    gtttgacatatgaaaatcag 81
             ||||||||||||||||||||
Sbjct: 93705 gtttgacatatgaaaatcag 93724



to top

>gb|AC024902.54| Homo sapiens 12 BAC RP11-684O24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167113

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 368    atgtgacttatggtcctctcctga 391
              ||||||||||||||||||| ||||
Sbjct: 133399 atgtgacttatggtcctctgctga 133376



to top

>emb|BX005449.4| Zebrafish DNA sequence from clone CH211-174A15 in linkage group 10,
              complete sequence
          Length = 142054

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    aacatttaaacatgcatttg 304
              ||||||||||||||||||||
Sbjct: 122342 aacatttaaacatgcatttg 122361



to top

>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                          
Query: 319    gacatatactggtgcactgcagactgtggctggattactggaca 362
              ||||||| |||||||||||| |||   ||||||||||| |||||
Sbjct: 332109 gacatattctggtgcactgccgacatcggctggattacgggaca 332152



to top

>dbj|D00711.1|PELLBP Periplaneta americana mRNA for lipopolysaccharide-binding protein,
           complete cds
          Length = 2309

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 392 atggagccacagttctcgtt 411
           ||||||||||||||||||||
Sbjct: 736 atggagccacagttctcgtt 717



to top

>emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chromosome 2, complete
              sequence
          Length = 215389

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    aggaaaaccaaagggtgtat 247
              ||||||||||||||||||||
Sbjct: 108853 aggaaaaccaaagggtgtat 108872



to top

>gb|AC132241.3| Mus musculus BAC clone RP24-413I2 from chromosome 1, complete sequence
          Length = 138670

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tgtttgacatatgaaaatca 80
              ||||||||||||||||||||
Sbjct: 119965 tgtttgacatatgaaaatca 119946


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,410,577
Number of Sequences: 3902068
Number of extensions: 5410577
Number of successful extensions: 101794
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101486
Number of HSP's gapped (non-prelim): 295
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top