ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bah63d06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474852.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| ||||| | ||||||| |||||||||||| |||||| Sbjct: 198 cgtcgaccgcatcagcgccctccccgacgcgatcctccgcaacatcgtctcccgcctccc 257 Query: 299 cgtcaaggacggcgcccgcacc 320 ||||||||||| ||| |||||| Sbjct: 258 cgtcaaggacgccgcgcgcacc 279
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| ||||| | ||||||| |||||||||||| |||||| Sbjct: 7218532 cgtcgaccgcatcagcgccctccccgacgcgatcctccgcaacatcgtctcccgcctccc 7218473 Query: 299 cgtcaaggacggcgcccgcacc 320 ||||||||||| ||| |||||| Sbjct: 7218472 cgtcaaggacgccgcgcgcacc 7218451 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||| |||||||||| ||||||||||||||||| ||| |||||| Sbjct: 7228923 cctccgccggatcgtctcccgcctccccgtcaaggacgccgcgcgcacc 7228875 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 gccgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctc 296 |||||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| Sbjct: 7224357 gccgtcgaccgcatcagcgccctccccgacgcgctcctccgcagggtcgtctcccgcctc 7224298 Query: 297 cccgtcaaggacggcgcccgcacc 320 ||||||||||||| ||| |||||| Sbjct: 7224297 cccgtcaaggacgccgcgcgcacc 7224274 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctccg 360 |||||||||||| |||||||||||| Sbjct: 21916963 cggtggcgccacctctggcgctccg 21916939 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 accgcccgccggaggggagg 225 |||||||||||||||||||| Sbjct: 25113954 accgcccgccggaggggagg 25113935 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 21973935 cggtggcgccacctctggcgctcc 21973912 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 293 cctccccgtcaaggacggcgcccgcacc 320 ||||||| |||||||| ||||||||||| Sbjct: 12760909 cctccccttcaaggacagcgcccgcacc 12760882
>dbj|AK069629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024E15, full insert sequence Length = 1869 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| ||||| | ||||||| |||||||||||| |||||| Sbjct: 263 cgtcgaccgcatcagcgccctccccgacgcgatcctccgcaacatcgtctcccgcctccc 322 Query: 299 cgtcaaggacggcgcccgcacc 320 ||||||||||| ||| |||||| Sbjct: 323 cgtcaaggacgccgcgcgcacc 344
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| ||||| | ||||||| |||||||||||| |||||| Sbjct: 82269 cgtcgaccgcatcagcgccctccccgacgcgatcctccgcaacatcgtctcccgcctccc 82210 Query: 299 cgtcaaggacggcgcccgcacc 320 ||||||||||| ||| |||||| Sbjct: 82209 cgtcaaggacgccgcgcgcacc 82188 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||| |||||||||| ||||||||||||||||| ||| |||||| Sbjct: 92660 cctccgccggatcgtctcccgcctccccgtcaaggacgccgcgcgcacc 92612 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 gccgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctc 296 |||||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| Sbjct: 88094 gccgtcgaccgcatcagcgccctccccgacgcgctcctccgcagggtcgtctcccgcctc 88035 Query: 297 cccgtcaaggacggcgcccgcacc 320 ||||||||||||| ||| |||||| Sbjct: 88034 cccgtcaaggacgccgcgcgcacc 88011
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 242 cgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgt 301 ||||||||||||| ||||| |||||| | ||||||| | ||||||||| |||||||| Sbjct: 4320770 cgaccgcatcagcctcctccccgacgacatcctccgcgccgtcgtctcccgcctccccgc 4320829 Query: 302 caaggacggcgcccgcacc 320 |||||||||||| |||||| Sbjct: 4320830 caaggacggcgcgcgcacc 4320848 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| |||||| ||||||| || |||| |||| |||||| Sbjct: 17375444 cgtcgaccgcatcagccgcctccccgacgagctcctccgcgacgtcgtgtcccgcctccc 17375385 Query: 299 cgtcaaggacggcgcccgcacc 320 || || ||||||||| |||||| Sbjct: 17375384 cgccagggacggcgcgcgcacc 17375363 Score = 60.0 bits (30), Expect = 9e-06 Identities = 96/118 (81%) Strand = Plus / Minus Query: 242 cgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgt 301 ||||| |||||||||||||| |||| | ||| || |||||||| ||| ||||||| Sbjct: 11415677 cgaccacatcagcaacctcccggacgccatccttggcgacatcgtcgcccgcctccccac 11415618 Query: 302 caaggacggcgcccgcacccagatcctcgcgtcccggtggcgccacgtctggcgctcc 359 ||| || | || | |||| ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 11415617 caaagaagccggcagcacgcagatcctcgcctgccggtggcgccacatctggcgctcc 11415560
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 242 cgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgt 301 ||||||||||||| ||||| |||||| | ||||||| | ||||||||| |||||||| Sbjct: 4334 cgaccgcatcagcctcctccccgacgacatcctccgcgccgtcgtctcccgcctccccgc 4393 Query: 302 caaggacggcgcccgcacc 320 |||||||||||| |||||| Sbjct: 4394 caaggacggcgcgcgcacc 4412
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 242 cgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgt 301 ||||||||||||| ||||| |||||| | ||||||| | ||||||||| |||||||| Sbjct: 137584 cgaccgcatcagcctcctccccgacgacatcctccgcgccgtcgtctcccgcctccccgc 137643 Query: 302 caaggacggcgcccgcacc 320 |||||||||||| |||||| Sbjct: 137644 caaggacggcgcgcgcacc 137662
>ref|NM_192623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 281 catcgtctccctcctccccgtcaaggacggcgcccgcacc 320 ||||||||| | |||||||||||||||||||||||||||| Sbjct: 171 catcgtctctcgcctccccgtcaaggacggcgcccgcacc 210
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 281 catcgtctccctcctccccgtcaaggacggcgcccgcacc 320 ||||||||| | |||||||||||||||||||||||||||| Sbjct: 23348127 catcgtctctcgcctccccgtcaaggacggcgcccgcacc 23348166 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 246 cgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgtcaag 305 ||||||||| ||||| |||||| |||||||||||||||||||| ||||||| |||| Sbjct: 23356860 cgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaag 23356919 Query: 306 gacggcgcccgcacc 320 || | |||||||||| Sbjct: 23356920 gatgccgcccgcacc 23356934 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 ||||||||||||||||| ||||| ||||| |||| || | ||||||||| |||||| Sbjct: 31758215 cgtcgaccgcatcagcaccctccctgacgagctcctcagcaaggtcgtctcccacctccc 31758156 Query: 299 cgtcaagga 307 ||||||||| Sbjct: 31758155 cgtcaagga 31758147 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacg 309 |||||| |||||||| ||| ||||||||||||||||| Sbjct: 23372888 ctccgcaacatcgtcgcccgcctccccgtcaaggacg 23372924
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 281 catcgtctccctcctccccgtcaaggacggcgcccgcacc 320 ||||||||| | |||||||||||||||||||||||||||| Sbjct: 73825 catcgtctctcgcctccccgtcaaggacggcgcccgcacc 73864 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 246 cgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgtcaag 305 ||||||||| ||||| |||||| |||||||||||||||||||| ||||||| |||| Sbjct: 82558 cgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaag 82617 Query: 306 gacggcgcccgcacc 320 || | |||||||||| Sbjct: 82618 gatgccgcccgcacc 82632 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacg 309 |||||| |||||||| ||| ||||||||||||||||| Sbjct: 98586 ctccgcaacatcgtcgcccgcctccccgtcaaggacg 98622
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 281 catcgtctccctcctccccgtcaaggacggcgcccgcacc 320 ||||||||| | |||||||||||||||||||||||||||| Sbjct: 134869 catcgtctctcgcctccccgtcaaggacggcgcccgcacc 134908 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 246 cgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgtcaag 305 ||||||||| ||||| |||||| |||||||||||||||||||| ||||||| |||| Sbjct: 143602 cgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaag 143661 Query: 306 gacggcgcccgcacc 320 || | |||||||||| Sbjct: 143662 gatgccgcccgcacc 143676
>ref|NM_192625.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1506 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 246 cgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgtcaag 305 ||||||||| ||||| |||||| |||||||||||||||||||| ||||||| |||| Sbjct: 118 cgcatcagcgccctccccgacgacctcctccgccacatcgtctcccgcctccccaccaag 177 Query: 306 gacggcgcccgcacc 320 || | |||||||||| Sbjct: 178 gatgccgcccgcacc 192
>ref|XM_465782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1974 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| |||||| ||||||| || |||| |||| |||||| Sbjct: 204 cgtcgaccgcatcagccgcctccccgacgagctcctccgcgacgtcgtgtcccgcctccc 263 Query: 299 cgtcaaggacggcgcccgcacc 320 || || ||||||||| |||||| Sbjct: 264 cgccagggacggcgcgcgcacc 285
>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0579G08 Length = 164452 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 |||||||||||||||| ||||| |||||| ||||||| || |||| |||| |||||| Sbjct: 148127 cgtcgaccgcatcagccgcctccccgacgagctcctccgcgacgtcgtgtcccgcctccc 148068 Query: 299 cgtcaaggacggcgcccgcacc 320 || || ||||||||| |||||| Sbjct: 148067 cgccagggacggcgcgcgcacc 148046
>dbj|AP004123.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1654_A02 Length = 128520 Score = 60.0 bits (30), Expect = 9e-06 Identities = 96/118 (81%) Strand = Plus / Minus Query: 242 cgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccccgt 301 ||||| |||||||||||||| |||| | ||| || |||||||| ||| ||||||| Sbjct: 85149 cgaccacatcagcaacctcccggacgccatccttggcgacatcgtcgcccgcctccccac 85090 Query: 302 caaggacggcgcccgcacccagatcctcgcgtcccggtggcgccacgtctggcgctcc 359 ||| || | || | |||| ||||||||||| | ||||||||||||| ||||||||||| Sbjct: 85089 caaagaagccggcagcacgcagatcctcgcctgccggtggcgccacatctggcgctcc 85032
>ref|XM_474854.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||| |||||||||| ||||||||||||||||| ||| |||||| Sbjct: 186 cctccgccggatcgtctcccgcctccccgtcaaggacgccgcgcgcacc 234
>dbj|AK100900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131H22, full insert sequence Length = 1828 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||| |||||||||| ||||||||||||||||| ||| |||||| Sbjct: 278 cctccgccggatcgtctcccgcctccccgtcaaggacgccgcgcgcacc 326
>ref|XM_474853.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 gccgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctc 296 |||||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| Sbjct: 145 gccgtcgaccgcatcagcgccctccccgacgcgctcctccgcagggtcgtctcccgcctc 204 Query: 297 cccgtcaaggacggcgcccgcacc 320 ||||||||||||| ||| |||||| Sbjct: 205 cccgtcaaggacgccgcgcgcacc 228
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 293 cctccccgtcaaggacggcgcccgcacc 320 |||||||||||||||||||||||||||| Sbjct: 103085 cctccccgtcaaggacggcgcccgcacc 103058
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 293 cctccccgtcaaggacggcgcccgcacc 320 |||||||||||||||||||||||||||| Sbjct: 18309873 cctccccgtcaaggacggcgcccgcacc 18309846
>dbj|AK106410.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-H10, full insert sequence Length = 1947 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 gccgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctc 296 |||||||||||||||||| ||||| ||||| ||||||| ||||||||| |||| Sbjct: 271 gccgtcgaccgcatcagcgccctccccgacgcgctcctccgcagggtcgtctcccgcctc 330 Query: 297 cccgtcaaggacggcgcccgcacc 320 ||||||||||||| ||| |||||| Sbjct: 331 cccgtcaaggacgccgcgcgcacc 354
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 282 atcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||||| |||||||||||||||||||| |||||| Sbjct: 15073017 atcgtctcccgtctccccgtcaaggacggcgctcgcacc 15073055
>dbj|AP004706.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0683E12 Length = 165766 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 282 atcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||||| |||||||||||||||||||| |||||| Sbjct: 63269 atcgtctcccgtctccccgtcaaggacggcgctcgcacc 63307
>dbj|AP004621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689D06 Length = 146551 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 282 atcgtctccctcctccccgtcaaggacggcgcccgcacc 320 |||||||||| |||||||||||||||||||| |||||| Sbjct: 71931 atcgtctcccgtctccccgtcaaggacggcgctcgcacc 71969
>ref|NM_186811.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1350 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacccagatcctcgc 331 ||||||| | |||||| ||| |||||| ||| |||| ||| ||||| ||| | ||| | Sbjct: 114 cctccgcgagatcgtcacccgcctcccatccaacgacgccgctcgcacgcagctgctctc 173 Query: 332 gtcccggtggcgccacgtctggcgctccgc 361 ||||||||||||||| ||||||||||||| Sbjct: 174 ctcccggtggcgccacctctggcgctccgc 203
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacccagatcctcgc 331 ||||||| | |||||| ||| |||||| ||| |||| ||| ||||| ||| | ||| | Sbjct: 7982896 cctccgcgagatcgtcacccgcctcccatccaacgacgccgctcgcacgcagctgctctc 7982955 Query: 332 gtcccggtggcgccacgtctggcgctccgc 361 ||||||||||||||| ||||||||||||| Sbjct: 7982956 ctcccggtggcgccacctctggcgctccgc 7982985 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcac 319 ||||||| ||||||||| ||||||||||||||||| ||| ||||| Sbjct: 3539805 ctccgccggatcgtctcctgcctccccgtcaaggacgccgcacgcac 3539759 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 tctggcgctccgcccctctgaa 370 |||||||||||||||||||||| Sbjct: 11030459 tctggcgctccgcccctctgaa 11030480 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 tctccctcctccccgtcaaggacggcgcccgcac 319 |||||||||||||| |||||||| ||||||||| Sbjct: 11012870 tctccctcctccccaccaaggacgccgcccgcac 11012837 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 tctccctcctccccgtcaaggacggcgcccgcac 319 |||||||||||||| |||||||| ||||||||| Sbjct: 11005250 tctccctcctccccaccaaggacgccgcccgcac 11005217
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacccagatcctcgc 331 ||||||| | |||||| ||| |||||| ||| |||| ||| ||||| ||| | ||| | Sbjct: 21093 cctccgcgagatcgtcacccgcctcccatccaacgacgccgctcgcacgcagctgctctc 21152 Query: 332 gtcccggtggcgccacgtctggcgctccgc 361 ||||||||||||||| ||||||||||||| Sbjct: 21153 ctcccggtggcgccacctctggcgctccgc 21182
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0418E08 Length = 141040 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 272 cctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcacccagatcctcgc 331 ||||||| | |||||| ||| |||||| ||| |||| ||| ||||| ||| | ||| | Sbjct: 99255 cctccgcgagatcgtcacccgcctcccatccaacgacgccgctcgcacgcagctgctctc 99314 Query: 332 gtcccggtggcgccacgtctggcgctccgc 361 ||||||||||||||| ||||||||||||| Sbjct: 99315 ctcccggtggcgccacctctggcgctccgc 99344
>ref|NM_191290.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 489 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 ||||||||||||||||| ||||| ||||| |||| || | ||||||||| |||||| Sbjct: 186 cgtcgaccgcatcagcaccctccctgacgagctcctcagcaaggtcgtctcccacctccc 245 Query: 299 cgtcaagga 307 ||||||||| Sbjct: 246 cgtcaagga 254
>ref|XM_463368.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1425 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacg 309 |||||| |||||||| ||| ||||||||||||||||| Sbjct: 130 ctccgcaacatcgtcgcccgcctccccgtcaaggacg 166
>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Minus Query: 239 cgtcgaccgcatcagcaacctccacgacgataacctccgccacatcgtctccctcctccc 298 ||||||||||||||||| ||||| ||||| |||| || | ||||||||| |||||| Sbjct: 36253 cgtcgaccgcatcagcaccctccctgacgagctcctcagcaaggtcgtctcccacctccc 36194 Query: 299 cgtcaagga 307 ||||||||| Sbjct: 36193 cgtcaagga 36185
>dbj|AK069151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007D17, full insert sequence Length = 1685 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacg 309 |||||| |||||||| ||| ||||||||||||||||| Sbjct: 181 ctccgcaacatcgtcgcccgcctccccgtcaaggacg 217
>ref|NM_186455.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcac 319 ||||||| ||||||||| ||||||||||||||||| ||| ||||| Sbjct: 684 ctccgccggatcgtctcctgcctccccgtcaaggacgccgcacgcac 638
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcac 319 ||||||| ||||||||| ||||||||||||||||| ||| ||||| Sbjct: 9122 ctccgccggatcgtctcctgcctccccgtcaaggacgccgcacgcac 9076
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 273 ctccgccacatcgtctccctcctccccgtcaaggacggcgcccgcac 319 ||||||| ||||||||| ||||||||||||||||| ||| ||||| Sbjct: 77755 ctccgccggatcgtctcctgcctccccgtcaaggacgccgcacgcac 77709
>ref|XM_477506.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1467 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 tctggcgctccgcccctctgaa 370 |||||||||||||||||||||| Sbjct: 260 tctggcgctccgcccctctgaa 281
>ref|NM_185301.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1551 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 tctccctcctccccgtcaaggacggcgcccgcac 319 |||||||||||||| |||||||| ||||||||| Sbjct: 166 tctccctcctccccaccaaggacgccgcccgcac 199
>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds Length = 70631 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gtcaaggacggcgcccgcacccagat 325 |||||||||| ||||||||||||||| Sbjct: 48535 gtcaaggacgtcgcccgcacccagat 48560
>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045F02 Length = 143668 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 tctggcgctccgcccctctgaa 370 |||||||||||||||||||||| Sbjct: 12978 tctggcgctccgcccctctgaa 12999
>dbj|AB095015.1| Terrabacter sp. DBF63 DNA, angular dioxygenase region Length = 11859 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gtcaaggacggcgcccgcacccagat 325 |||||||||| ||||||||||||||| Sbjct: 3269 gtcaaggacgtcgcccgcacccagat 3294
>dbj|AB054975.1| Terrabacter sp. DBF63 DNA, angular dioxygenase region Length = 8179 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gtcaaggacggcgcccgcacccagat 325 |||||||||| ||||||||||||||| Sbjct: 6108 gtcaaggacgtcgcccgcacccagat 6133
>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0091I19 Length = 126544 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 tctggcgctccgcccctctgaa 370 |||||||||||||||||||||| Sbjct: 92402 tctggcgctccgcccctctgaa 92423 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 tctccctcctccccgtcaaggacggcgcccgcac 319 |||||||||||||| |||||||| ||||||||| Sbjct: 74813 tctccctcctccccaccaaggacgccgcccgcac 74780 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 286 tctccctcctccccgtcaaggacggcgcccgcac 319 |||||||||||||| |||||||| ||||||||| Sbjct: 67193 tctccctcctccccaccaaggacgccgcccgcac 67160
>dbj|AK108035.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C04, full insert sequence Length = 1551 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 tctccctcctccccgtcaaggacggcgcccgcac 319 |||||||||||||| |||||||| ||||||||| Sbjct: 166 tctccctcctccccaccaaggacgccgcccgcac 199
>ref|XM_472612.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1632 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 cggtggcgccacgtctggcgctccg 360 |||||||||||| |||||||||||| Sbjct: 154 cggtggcgccacctctggcgctccg 178
>ref|XM_958485.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B24M22.90 [imported] - Neurospora crassa OR74A ) (NCU08717.1) partial mRNA Length = 1665 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 ccacatcgtctccctcctccccgtc 302 ||||||| ||||||||||||||||| Sbjct: 81 ccacatcttctccctcctccccgtc 105
>ref|XM_330833.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B24M22.90 [imported] - Neurospora crassa OR74A ) (NCU08717.1) partial mRNA Length = 1665 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 ccacatcgtctccctcctccccgtc 302 ||||||| ||||||||||||||||| Sbjct: 81 ccacatcttctccctcctccccgtc 105
>emb|AL390354.1|NCB24M22 Neurospora crassa DNA linkage group II BAC contig B24M22 Length = 90558 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 ccacatcgtctccctcctccccgtc 302 ||||||| ||||||||||||||||| Sbjct: 30695 ccacatcttctccctcctccccgtc 30671
>gb|AF435854.1| Plasmodium cynomolgi merozoite surface protein-9 precursor, gene, complete cds Length = 2823 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 tcgaccgcatcagcaacctcc 261 ||||||||||||||||||||| Sbjct: 1837 tcgaccgcatcagcaacctcc 1817
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctccg 360 |||||||||||| |||||||||||| Sbjct: 101664 cggtggcgccacctctggcgctccg 101640
>ref|NM_194682.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056A20.11), mRNA Length = 1176 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 121 cggtggcgccacctctggcgctcc 144
>ref|XM_472620.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 202 cggtggcgccacctctggcgctcc 225
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 62320 cggtggcgccacctctggcgctcc 62297
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 caccagcgccgtgaacaggt 115 |||||||||||||||||||| Sbjct: 981541 caccagcgccgtgaacaggt 981522
>gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 acgcctggctccggtccgcc 542 |||||||||||||||||||| Sbjct: 176 acgcctggctccggtccgcc 157
>gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 acgcctggctccggtccgcc 542 |||||||||||||||||||| Sbjct: 176 acgcctggctccggtccgcc 157
>gb|AY196441.1| Uncultured nitrogen-fixing bacterium clone c1-HW4 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 acgcctggctccggtccgcc 542 |||||||||||||||||||| Sbjct: 176 acgcctggctccggtccgcc 157
>ref|XM_541526.2| PREDICTED: Canis familiaris similar to Caspase recruitment domain protein 8 (Apoptotic protein NDPP1) (DACAR) (CARD-inhibitor of NF-kappaB activating ligand) (CARDINAL) (Tumor-up-regulated CARD-containing antagonist of CASP9) (TUCAN) (LOC484411), mRNA Length = 1632 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 acctccgccacatcgtctccctcc 294 |||||| ||||||||||||||||| Sbjct: 758 acctcccccacatcgtctccctcc 781
>ref|XM_849808.1| PREDICTED: Canis familiaris similar to Caspase recruitment domain protein 8 (Apoptotic protein NDPP1) (DACAR) (CARD-inhibitor of NF-kappaB activating ligand) (CARDINAL) (Tumor-up-regulated CARD-containing antagonist of CASP9) (TUCAN) (LOC491519), mRNA Length = 1701 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 acctccgccacatcgtctccctcc 294 |||||| ||||||||||||||||| Sbjct: 827 acctcccccacatcgtctccctcc 850
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 1543747 cggtggcgccacctctggcgctcc 1543724
>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete sequence Length = 121130 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 39857 cggtggcgccacctctggcgctcc 39834
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 cgccggaggggaggtagacggagg 235 |||||||||||||||||| ||||| Sbjct: 130754 cgccggaggggaggtagagggagg 130777
>emb|AL662962.3|OSJN00165 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029L02, complete sequence Length = 165786 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 293 cctccccgtcaaggacggcgcccgcacc 320 ||||||| |||||||| ||||||||||| Sbjct: 55128 cctccccttcaaggacagcgcccgcacc 55101
>gb|DQ098200.1| Uncultured nitrogen-fixing bacterium clone B100 dinitrogenase reductase (nifH) gene, partial cds Length = 362 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 acgcctggctccggtccgcc 542 |||||||||||||||||||| Sbjct: 173 acgcctggctccggtccgcc 154
>dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence Length = 104014 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cgcccgcacccagatcctcg 330 |||||||||||||||||||| Sbjct: 7675 cgcccgcacccagatcctcg 7694
>tpg|BK000809.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M220, complete sequence Length = 1229 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 accgcccgccggaggggagg 225 |||||||||||||||||||| Sbjct: 441 accgcccgccggaggggagg 422
>emb|CR592243.1| full-length cDNA clone CS0DF018YE19 of Fetal brain of Homo sapiens (human) Length = 1905 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 cgaggcgccagccgcctccgccgg 32 ||||||||||||||||| |||||| Sbjct: 196 cgaggcgccagccgcctacgccgg 219
>ref|XM_940069.1| PREDICTED: Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3E (PPP1R3E), mRNA Length = 4761 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 cgaggcgccagccgcctccgccgg 32 ||||||||||||||||| |||||| Sbjct: 872 cgaggcgccagccgcctacgccgg 895
>ref|XM_927029.1| PREDICTED: Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3E (PPP1R3E), mRNA Length = 4761 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 cgaggcgccagccgcctccgccgg 32 ||||||||||||||||| |||||| Sbjct: 872 cgaggcgccagccgcctacgccgg 895
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 1543747 cggtggcgccacctctggcgctcc 1543724
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgccggaggggaggtagacg 231 |||||||||||||||||||| Sbjct: 20769438 cgccggaggggaggtagacg 20769457
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcgccagccgcctccgccgg 32 |||||||||||||||||||| Sbjct: 5151544 gcgccagccgcctccgccgg 5151563
>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20, complete sequence Length = 99855 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 46506 cggtggcgccacctctggcgctcc 46483
>gb|AF402142.1| Hyaloraphidium curvatum mitochondrial DNA, complete genome Length = 29593 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 atacttccaagaagaggaag 86 |||||||||||||||||||| Sbjct: 13739 atacttccaagaagaggaag 13720
>gb|AC147282.3| Pan troglodytes BAC clone RP43-86L11 from chromosome 7, complete sequence Length = 223086 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ccgccacatcgtctccctcc 294 |||||||||||||||||||| Sbjct: 2114 ccgccacatcgtctccctcc 2133
>dbj|AB055250.1| Macaca fascicularis brain cDNA, clone:QflA-10033, similar to human kelch domain containing 4 (KLHDC4 ), mRNA, NM_017566.2 Length = 1911 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 295 tccccgtcaaggacggcgcccgcacccagatc 326 ||||||||||| |||| |||| |||||||||| Sbjct: 668 tccccgtcaagcacggggcccacacccagatc 699
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcgccagccgcctccgccgg 32 |||||||||||||||||||| Sbjct: 110582 gcgccagccgcctccgccgg 110601
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 gcgccagccgcctccgccgg 32 |||||||||||||||||||| Sbjct: 18266 gcgccagccgcctccgccgg 18285
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgccggaggggaggtagacg 231 |||||||||||||||||||| Sbjct: 44467 cgccggaggggaggtagacg 44486
>dbj|AK024489.1| Homo sapiens mRNA for FLJ00089 protein, partial cds Length = 4495 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 cgaggcgccagccgcctccgccgg 32 ||||||||||||||||| |||||| Sbjct: 878 cgaggcgccagccgcctacgccgg 901
>dbj|AK064648.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-D08, full insert sequence Length = 1685 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 283 cggtggcgccacctctggcgctcc 306
>emb|AL049829.4|CNS0000B Human chromosome 14 DNA sequence BAC R-124D2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196292 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cgaggcgccagccgcctccgccgg 32 ||||||||||||||||| |||||| Sbjct: 83728 cgaggcgccagccgcctacgccgg 83705
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 336 cggtggcgccacgtctggcgctcc 359 |||||||||||| ||||||||||| Sbjct: 1543744 cggtggcgccacctctggcgctcc 1543721
>gb|AF073896.1|SCCCAGC3 Streptomyces clavuligerus cephalosporin hydroxylase CmcI (cmcI) and methyltransferase CmcJ (cmcJ) genes, complete cds Length = 2291 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 cggggcccggccgccgcttc 479 |||||||||||||||||||| Sbjct: 1705 cggggcccggccgccgcttc 1724
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 accgcccgccggaggggagg 225 |||||||||||||||||||| Sbjct: 61381 accgcccgccggaggggagg 61362
>gb|AY860112.1| Micromonospora sp. ATCC 39149 RpsL (rpsL), RpsG (rpsG), FusA (fusA), Tuf1 (tuf1), RpsJ (rpsJ), RplC (rplC), RplD (rplD), and RplW (rplW) genes, complete cds; and RplB (rplB) gene, partial cds Length = 8196 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 gcaccgccggcgggggcgcc 178 |||||||||||||||||||| Sbjct: 235 gcaccgccggcgggggcgcc 216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,704,852 Number of Sequences: 3902068 Number of extensions: 3704852 Number of successful extensions: 76890 Number of sequences better than 10.0: 85 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75630 Number of HSP's gapped (non-prelim): 1253 length of query: 599 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 576 effective length of database: 17,143,297,704 effective search space: 9874539477504 effective search space used: 9874539477504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
