ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC163402.5| Mus musculus chromosome 7, clone RP23-290H21, com... 50 0.009
2gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, com... 50 0.009
3gb|AC128666.4| Mus musculus BAC clone RP24-153M4 from chromosome... 50 0.009
4gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome... 44 0.56
5emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chro... 44 0.56
6gb|AC111116.13| Mus musculus chromosome 16, clone RP23-214I13, c... 42 2.2
7gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 42 2.2
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 2.2
9gb|AC115731.11| Mus musculus chromosome 16, clone RP23-184A15, c... 42 2.2
10gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp... 42 2.2
11dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 42 2.2
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
14gb|AC108112.2| Homo sapiens chromosome 5 clone RP11-267A15, comp... 42 2.2
15dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
16dbj|AK121387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
17dbj|AK106524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
18dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.2
19gb|AC115015.8| Mus musculus chromosome 3, clone RP24-196A21, com... 40 8.7
20ref|NM_006493.1| Homo sapiens ceroid-lipofuscinosis, neuronal 5 ... 40 8.7
21ref|XM_637793.1| Dictyostelium discoideum transcription factor E... 40 8.7
22gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosom... 40 8.7
23ref|XM_466935.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.7
24gb|BC017226.1| Homo sapiens ring finger protein 166, mRNA (cDNA ... 40 8.7
25gb|AC161122.3| Pan troglodytes BAC clone CH251-727J16 from chrom... 40 8.7
26gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence 40 8.7
27gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 8.7
28gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568... 40 8.7
29gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, co... 40 8.7
30gb|AC146040.2| Pan troglodytes BAC clone RP43-97N16 from 7, comp... 40 8.7
31emb|AJ011373.1|HSA011373 Homo sapiens mRNA for hypothetical prot... 40 8.7
32emb|CT025837.1| Medicago truncatula chromosome 5 clone mth2-28f1... 40 8.7
33gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosom... 40 8.7
34gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome... 40 8.7
35gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, com... 40 8.7
36gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosom... 40 8.7
37gb|AC123805.4| Mus musculus BAC clone RP24-150A12 from chromosom... 40 8.7
38gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, comple... 40 8.7
39gb|AC006978.2| Homo sapiens BAC clone GS1-66B6 from 7, complete ... 40 8.7
40ref|XM_661929.1| Cryptosporidium hominis TU502 testis specific l... 40 8.7
41gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosom... 40 8.7
42gb|AC036125.7| Homo sapiens chromosome 18, clone RP11-482F20, co... 40 8.7
43gb|BC099203.1| Rattus norvegicus cDNA clone IMAGE:7384081 40 8.7
44gb|AC163292.2| Mus musculus BAC clone RP23-241P22 from chromosom... 40 8.7
45gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252... 40 8.7
46emb|CR620092.1| full-length cDNA clone CS0DH007YF22 of T cells (... 40 8.7
47emb|CR612154.1| full-length cDNA clone CS0DD001YA18 of Neuroblas... 40 8.7
48dbj|AK057201.1| Homo sapiens cDNA FLJ32639 fis, clone SYNOV20010... 40 8.7
49emb|CR598819.1| full-length cDNA clone CS0DB005YE18 of Neuroblas... 40 8.7
50dbj|AK057106.1| Homo sapiens cDNA FLJ32544 fis, clone SMINT20005... 40 8.7
51emb|CR596749.1| full-length cDNA clone CS0DC020YE10 of Neuroblas... 40 8.7
52gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, com... 40 8.7
53gb|AC160980.5| Mus musculus BAC clone RP23-386F19 from chromosom... 40 8.7
54ref|XM_626034.1| Cryptosporidium parvum Iowa II leucine-rich rep... 40 8.7
55gb|BC013948.2| Homo sapiens ring finger protein 166, mRNA (cDNA ... 40 8.7
56dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
58gb|AC138028.1| Homo sapiens chromosome 16 clone RP5-1142A6, comp... 40 8.7
59ref|NM_017586.1| Homo sapiens chromosome 9 open reading frame 7 ... 40 8.7
60gb|AC138656.1| Homo sapiens BAC clone RP11-421F20 from 4, comple... 40 8.7
61dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
62emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chro... 40 8.7
63dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
64dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
65gb|AC091716.3| Pan troglodytes clone RP43-147G10, complete sequence 40 8.7
66dbj|AK100670.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.7
67gb|AC101945.33| Mus musculus chromosome 15, clone RP24-123O20, c... 40 8.7
68gb|AF068227.1|AF068227 Homo sapiens putative transmembrane prote... 40 8.7
69gb|AC002325.1|AC002325 Homo sapiens chromosome 9q34, clone 23B4,... 40 8.7
70gb|AC001644.1|AC001644 Genomic sequence from Human 9q34, complet... 40 8.7
71gb|AC001226.1|AC001226 Genomic sequence from Human 13, complete ... 40 8.7
72emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 8.7
73dbj|AP006128.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.7
74dbj|AP004525.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 8.7
75ref|NM_178841.2| Homo sapiens ring finger protein 166 (RNF166), ... 40 8.7
76emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chro... 40 8.7
77gb|M60598.1|WHTDHDPD17 T.aestivum dihydrodipicolinate synthase (... 40 8.7
78emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on ch... 40 8.7
79emb|AL731698.10| Mouse DNA sequence from clone RP23-161B3 on chr... 40 8.7 
>gb|AC163402.5| Mus musculus chromosome 7, clone RP23-290H21, complete sequence
          Length = 240582

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 292    gctgtgtttggcattgttcagtaatagca 320
              |||||||||||||||||||||||| ||||
Sbjct: 176324 gctgtgtttggcattgttcagtaaaagca 176296
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>gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, complete sequence
          Length = 195638

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 292    gctgtgtttggcattgttcagtaatagca 320
              |||||||||||||||||||||||| ||||
Sbjct: 179192 gctgtgtttggcattgttcagtaaaagca 179220
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>gb|AC128666.4| Mus musculus BAC clone RP24-153M4 from chromosome 7, complete sequence
          Length = 138751

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 292   gctgtgtttggcattgttcagtaatagca 320
             |||||||||||||||||||||||| ||||
Sbjct: 50727 gctgtgtttggcattgttcagtaaaagca 50699
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>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence
          Length = 180931

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 499   taactctggctagcctggaagt 520
             ||||||||||||||||||||||
Sbjct: 62322 taactctggctagcctggaagt 62343
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>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete
              sequence
          Length = 209836

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 499    taactctggctagcctggaagt 520
              ||||||||||||||||||||||
Sbjct: 190569 taactctggctagcctggaagt 190548
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>gb|AC111116.13| Mus musculus chromosome 16, clone RP23-214I13, complete sequence
          Length = 173839

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 574   attatgtgaagaaggaaaggg 594
             |||||||||||||||||||||
Sbjct: 19411 attatgtgaagaaggaaaggg 19391



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 535   attatgtgaagaaggaaaggg 555
             |||||||||||||||||||||
Sbjct: 19411 attatgtgaagaaggaaaggg 19391
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>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
             sequence
          Length = 120254

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 381   tcatgctttgtcatcggtgac 401
             |||||||||||||||||||||
Sbjct: 89279 tcatgctttgtcatcggtgac 89259
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 381      tcatgctttgtcatcggtgac 401
                |||||||||||||||||||||
Sbjct: 24384678 tcatgctttgtcatcggtgac 24384698
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>gb|AC115731.11| Mus musculus chromosome 16, clone RP23-184A15, complete sequence
          Length = 228467

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 574    attatgtgaagaaggaaaggg 594
              |||||||||||||||||||||
Sbjct: 207215 attatgtgaagaaggaaaggg 207195



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 535    attatgtgaagaaggaaaggg 555
              |||||||||||||||||||||
Sbjct: 207215 attatgtgaagaaggaaaggg 207195
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>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 556  tgccacaaagcaaagctgatt 576
            |||||||||||||||||||||
Sbjct: 7094 tgccacaaagcaaagctgatt 7114
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 10     cccgcgcagcccccctgctctgacc 34
              |||||||||||||||||| ||||||
Sbjct: 719696 cccgcgcagcccccctgcgctgacc 719672
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 379      ggtcatgctttgtcatcggtg 399
                |||||||||||||||||||||
Sbjct: 20603625 ggtcatgctttgtcatcggtg 20603645
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 381      tcatgctttgtcatcggtgac 401
                |||||||||||||||||||||
Sbjct: 24302147 tcatgctttgtcatcggtgac 24302167
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>gb|AC108112.2| Homo sapiens chromosome 5 clone RP11-267A15, complete sequence
          Length = 154752

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 556    tgccacaaagcaaagctgatt 576
              |||||||||||||||||||||
Sbjct: 151043 tgccacaaagcaaagctgatt 151063
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>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0427B07
          Length = 172058

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   ggtcatgctttgtcatcggtg 399
             |||||||||||||||||||||
Sbjct: 26032 ggtcatgctttgtcatcggtg 26052
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>dbj|AK121387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127P05, full
           insert sequence
          Length = 1962

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 379 ggtcatgctttgtcatcggtg 399
           |||||||||||||||||||||
Sbjct: 472 ggtcatgctttgtcatcggtg 452
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>dbj|AK106524.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D09, full
           insert sequence
          Length = 3237

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 379 ggtcatgctttgtcatcggtg 399
           |||||||||||||||||||||
Sbjct: 533 ggtcatgctttgtcatcggtg 513
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>dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2528N2, complete
              sequences
          Length = 208600

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 205    ccaagccacaagcgcatcctgccct 229
              ||||||||||||| |||||||||||
Sbjct: 121168 ccaagccacaagctcatcctgccct 121144
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>gb|AC115015.8| Mus musculus chromosome 3, clone RP24-196A21, complete sequence
          Length = 137911

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 41    aaccccaaccagttcggctccaaaatct 68
             ||||||||||||| ||| ||||||||||
Sbjct: 75568 aaccccaaccagtccggttccaaaatct 75595
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>ref|NM_006493.1| Homo sapiens ceroid-lipofuscinosis, neuronal 5 (CLN5), mRNA
          Length = 4080

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  aagtacttgaaagttgaaac 266
            ||||||||||||||||||||
Sbjct: 3713 aagtacttgaaagttgaaac 3694
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>ref|XM_637793.1| Dictyostelium discoideum transcription factor E2F/dimerisation
           partner (TDP) family protein (DDB0220101), partial mRNA
          Length = 1974

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 311 agtaatagcataaatgaggctaat 334
           ||||||||||| ||||||||||||
Sbjct: 358 agtaatagcattaatgaggctaat 381
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>gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosome 8, complete sequence
          Length = 224322

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 167544 taactctggctagcctggaa 167563
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>ref|XM_466935.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2196

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 342 caagttcatcggaatgttcttgcgctggcgtcatctcggtcatgctttgtcatcggtgac 401
           ||||| |||||  |||| |||||  |||| || |||||||||||||| ||| | ||||| 
Sbjct: 238 caagtgcatcgacatgtacttgcattggcatcttctcggtcatgcttcgtccttggtgat 297

                               
Query: 402 catctcccgttcagaatgct 421
           || || || |||||||||||
Sbjct: 298 caccttccattcagaatgct 317
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>gb|BC017226.1| Homo sapiens ring finger protein 166, mRNA (cDNA clone MGC:14381
            IMAGE:4299817), complete cds
          Length = 1895

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacctggagctgccgccgtc 96
            ||||||||||||||||||||
Sbjct: 1063 gacctggagctgccgccgtc 1082
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>gb|AC161122.3| Pan troglodytes BAC clone CH251-727J16 from chromosome 7, complete
              sequence
          Length = 211581

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 615    tatgtcaagaaggaaagggt 634
              ||||||||||||||||||||
Sbjct: 200613 tatgtcaagaaggaaagggt 200632
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>gb|AC087860.2| Bos taurus clone RP42-135P2, complete sequence
          Length = 203696

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   gaagaaggaaagggtgccac 561
             ||||||||||||||||||||
Sbjct: 86009 gaagaaggaaagggtgccac 86028
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 542    gaagaaggaaagggtgccac 561
              ||||||||||||||||||||
Sbjct: 676513 gaagaaggaaagggtgccac 676532
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>gb|AC117076.3| Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4,
              complete sequence
          Length = 146570

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 311    agtaatagcataaatgaggctaat 334
              ||||||||||| ||||||||||||
Sbjct: 131680 agtaatagcattaatgaggctaat 131657
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>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 114953 taactctggctagcctggaa 114934
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>gb|AC146040.2| Pan troglodytes BAC clone RP43-97N16 from 7, complete sequence
          Length = 175808

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 243   tataaagtacttgaaagttgaaacataactac 274
             |||||||||||| |||||| ||||| ||||||
Sbjct: 30133 tataaagtactttaaagttcaaacagaactac 30164
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>emb|AJ011373.1|HSA011373 Homo sapiens mRNA for hypothetical protein (C9orf7 gene)
          Length = 2695

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 582  aagaaggaaagggcgccaca 601
            ||||||||||||||||||||
Sbjct: 2619 aagaaggaaagggcgccaca 2600
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>emb|CT025837.1| Medicago truncatula chromosome 5 clone mth2-28f11, COMPLETE SEQUENCE
          Length = 99258

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   acttgaaagttgaaacataa 270
             ||||||||||||||||||||
Sbjct: 13655 acttgaaagttgaaacataa 13636
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>gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosome 8, complete sequence
          Length = 194109

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 132873 taactctggctagcctggaa 132854
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>gb|AC127292.4| Mus musculus BAC clone RP23-375J3 from chromosome 9, complete sequence
          Length = 157088

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   taactctggctagcctggaa 518
             ||||||||||||||||||||
Sbjct: 48215 taactctggctagcctggaa 48196
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>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   taactctggctagcctggaa 518
             ||||||||||||||||||||
Sbjct: 84444 taactctggctagcctggaa 84463
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>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence
          Length = 162530

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 148875 taactctggctagcctggaa 148856
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>gb|AC123805.4| Mus musculus BAC clone RP24-150A12 from chromosome 7, complete sequence
          Length = 160666

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 158021 taactctggctagcctggaa 158002
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>gb|AC124574.4| Mus musculus BAC clone RP23-160J13 from 7, complete sequence
          Length = 176188

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   taactctggctagcctggaa 518
             ||||||||||||||||||||
Sbjct: 82747 taactctggctagcctggaa 82728
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>gb|AC006978.2| Homo sapiens BAC clone GS1-66B6 from 7, complete sequence
          Length = 113006

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 243   tataaagtacttgaaagttgaaacataactac 274
             |||||||||||| |||||| ||||| ||||||
Sbjct: 86141 tataaagtactttaaagttcaaacagaactac 86110
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>ref|XM_661929.1| Cryptosporidium hominis TU502 testis specific leucine rich repeat
            protein (Chro.50306) partial mRNA
          Length = 5613

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 573  gattatgtgaagaaggaaag 592
            ||||||||||||||||||||
Sbjct: 5257 gattatgtgaagaaggaaag 5276



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  gattatgtgaagaaggaaag 553
            ||||||||||||||||||||
Sbjct: 5257 gattatgtgaagaaggaaag 5276
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>gb|AC159895.2| Mus musculus BAC clone RP23-260J19 from chromosome 9, complete sequence
          Length = 191882

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 136286 taactctggctagcctggaa 136267
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>gb|AC036125.7| Homo sapiens chromosome 18, clone RP11-482F20, complete sequence
          Length = 172579

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    acccaaaccccaaccagttcggct 59
             ||||||||||||||||||| ||||
Sbjct: 22647 acccaaaccccaaccagtttggct 22624
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>gb|BC099203.1| Rattus norvegicus cDNA clone IMAGE:7384081
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 499 taactctggctagcctggaa 518
           ||||||||||||||||||||
Sbjct: 297 taactctggctagcctggaa 316
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>gb|AC163292.2| Mus musculus BAC clone RP23-241P22 from chromosome 13, complete
             sequence
          Length = 208105

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   taactctggctagcctggaa 518
             ||||||||||||||||||||
Sbjct: 10859 taactctggctagcctggaa 10840
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>gb|AC090647.6| Genomic sequence for Mus musculus, clone RP23-252I12, complete sequence
          Length = 139891

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ctctgacctacccaaacccc 46
             ||||||||||||||||||||
Sbjct: 36087 ctctgacctacccaaacccc 36068
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>emb|CR620092.1| full-length cDNA clone CS0DH007YF22 of T cells (Jurkat cell line)
           of Homo sapiens (human)
          Length = 1633

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  gacctggagctgccgccgtc 96
           ||||||||||||||||||||
Sbjct: 879 gacctggagctgccgccgtc 898
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>emb|CR612154.1| full-length cDNA clone CS0DD001YA18 of Neuroblastoma Cot
            50-normalized of Homo sapiens (human)
          Length = 1802

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacctggagctgccgccgtc 96
            ||||||||||||||||||||
Sbjct: 1036 gacctggagctgccgccgtc 1055
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>dbj|AK057201.1| Homo sapiens cDNA FLJ32639 fis, clone SYNOV2001014, weakly similar
           to Mus musculus Zfp228 (Znf228) mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  gacctggagctgccgccgtc 96
           ||||||||||||||||||||
Sbjct: 733 gacctggagctgccgccgtc 752
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>emb|CR598819.1| full-length cDNA clone CS0DB005YE18 of Neuroblastoma Cot
            10-normalized of Homo sapiens (human)
          Length = 1796

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacctggagctgccgccgtc 96
            ||||||||||||||||||||
Sbjct: 1034 gacctggagctgccgccgtc 1053
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>dbj|AK057106.1| Homo sapiens cDNA FLJ32544 fis, clone SMINT2000545, weakly similar to
            Mus musculus Zfp228 (Znf228) mRNA
          Length = 2419

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacctggagctgccgccgtc 96
            ||||||||||||||||||||
Sbjct: 1662 gacctggagctgccgccgtc 1681
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>emb|CR596749.1| full-length cDNA clone CS0DC020YE10 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1153

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  gacctggagctgccgccgtc 96
           ||||||||||||||||||||
Sbjct: 372 gacctggagctgccgccgtc 391
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>gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, complete sequence
          Length = 151032

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 36 acccaaaccccaaccagttcggct 59
          ||||||||||||||||||| ||||
Sbjct: 42 acccaaaccccaaccagtttggct 65
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>gb|AC160980.5| Mus musculus BAC clone RP23-386F19 from chromosome 13, complete sequence
          Length = 184857

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 125674 taactctggctagcctggaa 125693
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>ref|XM_626034.1| Cryptosporidium parvum Iowa II leucine-rich repeat protein
            (cgd5_810), partial mRNA
          Length = 7017

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 573  gattatgtgaagaaggaaag 592
            ||||||||||||||||||||
Sbjct: 5257 gattatgtgaagaaggaaag 5276



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  gattatgtgaagaaggaaag 553
            ||||||||||||||||||||
Sbjct: 5257 gattatgtgaagaaggaaag 5276
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>gb|BC013948.2| Homo sapiens ring finger protein 166, mRNA (cDNA clone MGC:2647
            IMAGE:3509621), complete cds
          Length = 1341

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacctggagctgccgccgtc 96
            ||||||||||||||||||||
Sbjct: 1011 gacctggagctgccgccgtc 1030
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                            
Query: 342      caagttcatcggaatgttcttgcgctggcgtcatctcggtcatgctttgtcatcggtgac 401
                ||||| |||||  |||| |||||  |||| || |||||||||||||| ||| | ||||| 
Sbjct: 25531333 caagtgcatcgacatgtacttgcattggcatcttctcggtcatgcttcgtccttggtgat 25531274

                                    
Query: 402      catctcccgttcagaatgct 421
                || || || |||||||||||
Sbjct: 25531273 caccttccattcagaatgct 25531254
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 180      ccctttctgccccgcacatt 199
                ||||||||||||||||||||
Sbjct: 24555889 ccctttctgccccgcacatt 24555870
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>gb|AC138028.1| Homo sapiens chromosome 16 clone RP5-1142A6, complete sequence
          Length = 127698

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    gacctggagctgccgccgtc 96
             ||||||||||||||||||||
Sbjct: 81386 gacctggagctgccgccgtc 81405
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>ref|NM_017586.1| Homo sapiens chromosome 9 open reading frame 7 (C9orf7), mRNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 582  aagaaggaaagggcgccaca 601
            ||||||||||||||||||||
Sbjct: 2619 aagaaggaaagggcgccaca 2600
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>gb|AC138656.1| Homo sapiens BAC clone RP11-421F20 from 4, complete sequence
          Length = 57169

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   ctggaagtccaaagcaaagc 532
             ||||||||||||||||||||
Sbjct: 41939 ctggaagtccaaagcaaagc 41920
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>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0686E09
          Length = 156425

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    ccctttctgccccgcacatt 199
              ||||||||||||||||||||
Sbjct: 136273 ccctttctgccccgcacatt 136254
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>emb|AL929404.19| Mouse DNA sequence from clone RP23-71H9 on chromosome 2, complete
             sequence
          Length = 187610

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   taactctggctagcctggaa 518
             ||||||||||||||||||||
Sbjct: 88616 taactctggctagcctggaa 88597
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>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0014E22
          Length = 157627

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 342  caagttcatcggaatgttcttgcgctggcgtcatctcggtcatgctttgtcatcggtgac 401
            ||||| |||||  |||| |||||  |||| || |||||||||||||| ||| | ||||| 
Sbjct: 1380 caagtgcatcgacatgtacttgcattggcatcttctcggtcatgcttcgtccttggtgat 1321

                                
Query: 402  catctcccgttcagaatgct 421
            || || || |||||||||||
Sbjct: 1320 caccttccattcagaatgct 1301
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>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1581_H09
          Length = 86699

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                         
Query: 342   caagttcatcggaatgttcttgcgctggcgtcatctcggtcatgctttgtcatcggtgac 401
             ||||| |||||  |||| |||||  |||| || |||||||||||||| ||| | ||||| 
Sbjct: 22732 caagtgcatcgacatgtacttgcattggcatcttctcggtcatgcttcgtccttggtgat 22673

                                 
Query: 402   catctcccgttcagaatgct 421
             || || || |||||||||||
Sbjct: 22672 caccttccattcagaatgct 22653
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>gb|AC091716.3| Pan troglodytes clone RP43-147G10, complete sequence
          Length = 122710

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 243   tataaagtacttgaaagttgaaacataactac 274
             |||||||||||| |||||| ||||| ||||||
Sbjct: 14256 tataaagtactttaaagttcaaacagaactac 14225
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>dbj|AK100670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112J15, full
           insert sequence
          Length = 2196

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                       
Query: 342 caagttcatcggaatgttcttgcgctggcgtcatctcggtcatgctttgtcatcggtgac 401
           ||||| |||||  |||| |||||  |||| || |||||||||||||| ||| | ||||| 
Sbjct: 238 caagtgcatcgacatgtacttgcattggcatcttctcggtcatgcttcgtccttggtgat 297

                               
Query: 402 catctcccgttcagaatgct 421
           || || || |||||||||||
Sbjct: 298 caccttccattcagaatgct 317
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>gb|AC101945.33| Mus musculus chromosome 15, clone RP24-123O20, complete sequence
          Length = 184305

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 437   ctctgggttccatcagactgcttg 460
             ||||||||||||||||| ||||||
Sbjct: 73625 ctctgggttccatcagaatgcttg 73648
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>gb|AF068227.1|AF068227 Homo sapiens putative transmembrane protein (CLN5) mRNA, complete cds
          Length = 4080

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  aagtacttgaaagttgaaac 266
            ||||||||||||||||||||
Sbjct: 3713 aagtacttgaaagttgaaac 3694
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>gb|AC002325.1|AC002325 Homo sapiens chromosome 9q34, clone 23B4, complete sequence
          Length = 44762

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 582  aagaaggaaagggcgccaca 601
            ||||||||||||||||||||
Sbjct: 7163 aagaaggaaagggcgccaca 7182
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>gb|AC001644.1|AC001644 Genomic sequence from Human 9q34, complete sequence
          Length = 42415

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   aagaaggaaagggcgccaca 601
             ||||||||||||||||||||
Sbjct: 26882 aagaaggaaagggcgccaca 26901
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>gb|AC001226.1|AC001226 Genomic sequence from Human 13, complete sequence
          Length = 106988

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   aagtacttgaaagttgaaac 266
             ||||||||||||||||||||
Sbjct: 33575 aagtacttgaaagttgaaac 33556
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 229     tgaacttgctgagatataaa 248
               ||||||||||||||||||||
Sbjct: 1580178 tgaacttgctgagatataaa 1580197
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>dbj|AP006128.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT36M08, TM0213,
             complete sequence
          Length = 106033

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 599   acagagcaaagctgattatgtcaagaag 626
             |||| |||||||||| ||||||||||||
Sbjct: 62217 acagggcaaagctgaatatgtcaagaag 62244
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>dbj|AP004525.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08O18, TM0052b,
             complete sequence
          Length = 86497

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 599   acagagcaaagctgattatgtcaagaag 626
             |||| |||||||||| ||||||||||||
Sbjct: 67671 acagggcaaagctgaatatgtcaagaag 67698
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>ref|NM_178841.2| Homo sapiens ring finger protein 166 (RNF166), mRNA
          Length = 1895

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   gacctggagctgccgccgtc 96
            ||||||||||||||||||||
Sbjct: 1063 gacctggagctgccgccgtc 1082
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>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete
              sequence
          Length = 211194

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 499    taactctggctagcctggaa 518
              ||||||||||||||||||||
Sbjct: 167939 taactctggctagcctggaa 167958
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>gb|M60598.1|WHTDHDPD17 T.aestivum dihydrodipicolinate synthase (DHDPS) mRNA, complete cds,
           clone pDA17
          Length = 1458

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 159 cgcgttgccgccatcgccgttccctttctgccccgc 194
           ||||| |||||| ||||||||||| |||| ||||||
Sbjct: 150 cgcgtcgccgccgtcgccgttcccgttcttccccgc 185
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>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete
             sequence
          Length = 141790

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   ctaactctggctagcctgga 517
             ||||||||||||||||||||
Sbjct: 42226 ctaactctggctagcctgga 42207
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>emb|AL731698.10| Mouse DNA sequence from clone RP23-161B3 on chromosome 2, complete
             sequence
          Length = 61072

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   taactctggctagcctggaa 518
             ||||||||||||||||||||
Sbjct: 18514 taactctggctagcctggaa 18495


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,411,443
Number of Sequences: 3902068
Number of extensions: 5411443
Number of successful extensions: 98659
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98306
Number of HSP's gapped (non-prelim): 353
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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