Clone Information

BLAST Search Result

Clone Name	bah63d02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CLPAB_LYCES (P31542) ATP-dependent Clp protease ATP-binding subu...	209	4e-54
2	CLPC_PEA (P35100) ATP-dependent Clp protease ATP-binding subunit...	208	9e-54
3	CLPAA_LYCES (P31541) ATP-dependent Clp protease ATP-binding subu...	206	3e-53
4	CLPA_BRANA (P46523) ATP-dependent Clp protease ATP-binding subun...	186	6e-47
5	CLPC_GUITH (O78410) ATP-dependent Clp protease ATP-binding subun...	179	4e-45
6	CLPC_PORPU (P51332) ATP-dependent Clp protease ATP-binding subun...	176	5e-44
7	CLPC_CYACA (Q9TM05) ATP-dependent Clp protease ATP-binding subun...	168	1e-41
8	CLPC_ODOSI (P49574) ATP-dependent Clp protease ATP-binding subun...	132	6e-31
9	CLPC_MYCTU (P0A522) Probable ATP-dependent Clp protease ATP-bind...	121	2e-27
10	CLPC_MYCBO (P0A523) Probable ATP-dependent Clp protease ATP-bind...	121	2e-27
11	CLPC_MYCLE (P24428) Probable ATP-dependent Clp protease ATP-bind...	119	7e-27
12	CLPC_BACSU (P37571) Negative regulator of genetic competence clp...	107	2e-23
13	CLPB_OCEIH (Q8EU05) Chaperone clpB	103	3e-22
14	CLPC_CHLPN (Q9Z8A6) Probable ATP-dependent Clp protease ATP-bind...	86	1e-16
15	CLPC_CHLMU (Q9PKA8) Probable ATP-dependent Clp protease ATP-bind...	84	4e-16
16	CLPC_CHLTR (O84288) Probable ATP-dependent Clp protease ATP-bind...	84	4e-16
17	ERD1_ARATH (P42762) ERD1 protein, chloroplast precursor	62	2e-09
18	HLYB_TREHY (Q54316) Hemolysin B	59	9e-09
19	CLPB2_STRAW (Q826F2) Chaperone clpB 2	44	4e-04
20	Y2686_MYCBO (P0A525) Hypothetical protein Mb2686	43	6e-04
21	Y2667_MYCTU (P0A524) Hypothetical protein Rv2667/MT2741	43	6e-04
22	CLPA_POPEU (P84565) ATP-dependent Clp protease ATP-binding subun...	41	0.002
23	CLPB2_SYNP7 (O34209) Chaperone clpB 2	40	0.004
24	CLPB1_SYNY3 (P74459) Chaperone clpB 1	39	0.012
25	CLPB_PROMM (Q7V8B1) Chaperone clpB	39	0.012
26	CLPB_FUSNN (Q8RHQ8) Chaperone clpB	38	0.020
27	HS101_ORYSA (Q6F2Y7) Heat shock protein 101	37	0.059
28	CLPB_BRAJA (Q89UL2) Chaperone clpB	36	0.077
29	CLPB1_SYNP7 (P53533) Chaperone clpB 1	36	0.10
30	CLPB_GLOVI (Q7NFE9) Chaperone clpB	35	0.23
31	CLPB_RHOPA (Q6N1H2) Chaperone clpB	34	0.29
32	CLPB_DESVH (Q72AW6) Chaperone clpB	34	0.29
33	ZNHI4_MOUSE (Q99PT3) Zinc finger HIT domain-containing protein 4...	33	0.66
34	CLPB_MEIRU (Q7X2S8) Chaperone clpB	33	0.66
35	CLPB_LEPIN (Q8F509) Chaperone clpB	33	0.86
36	CLPB_LEPIC (Q72QU2) Chaperone clpB	33	0.86
37	CLPB_WOLPM (Q73IE4) Chaperone clpB	32	1.1
38	ZNHI4_HUMAN (Q9C086) Zinc finger HIT domain-containing protein 4...	32	1.9
39	CLPB2_ANASP (Q8YM56) Chaperone clpB 2	31	2.5
40	Y394_PSEAE (P24562) Hypothetical UPF0001 protein PA0394	31	3.3
41	CLPB_YERPE (Q74X11) Chaperone clpB	31	3.3
42	TEPA_BACHD (Q9KA93) Translocation-enhancing protein tepA	31	3.3
43	RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ra...	30	4.2
44	CLPB_BRUSU (Q7CEG6) Chaperone clpB	30	4.2
45	CLPB_BRUME (Q8YJ91) Chaperone clpB	30	4.2
46	RANB9_MOUSE (P69566) Ran-binding protein 9 (RanBP9) (Ran-binding...	30	4.2
47	UN84A_HUMAN (O94901) Sad1/unc-84 protein-like 1 (Unc-84 homolog A)	30	5.6
48	CLPB_PARUW (Q6MD97) Chaperone clpB	30	5.6
49	LAMA4_HUMAN (Q16363) Laminin alpha-4 chain precursor	30	7.2
50	TM16F_MOUSE (Q6P9J9) Transmembrane protein 16F	30	7.2
51	HS101_ARATH (P42730) Heat shock protein 101	30	7.2
52	LAMA4_MOUSE (P97927) Laminin alpha-4 chain precursor	30	7.2
53	FEN1A_ORYSA (Q9SXQ6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a)	30	7.2
54	GRP1_HORVU (P17816) Glycine-rich cell wall structural protein pr...	29	9.5
55	PROC_HUMAN (P04070) Vitamin K-dependent protein C precursor (EC ...	29	9.5
56	EXOC2_CAEEL (Q22706) Probable exocyst complex component 2 (Exocy...	29	9.5
57	NCAP_IAWIL (P15682) Nucleoprotein	29	9.5

>CLPAB_LYCES (P31542) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog CD4B, chloroplast precursor
          Length = 923

 Score =  209 bits (533), Expect = 4e-54
 Identities = 117/185 (63%), Positives = 138/185 (74%), Gaps = 2/185 (1%)
 Frame = +1

Query: 61  MAGTLVLPVALETTFAGRTGGRHWKSHGTRRTPSMLAMSLNRPVRMAAFVGLRSVHSFSA 240
           MA  LV   ++ ++ AG    +   S  T+R  +ML  + +  + +  F GLR  ++   
Sbjct: 1   MARALVQSTSIPSSVAGERTTKFNGSGKTKRAVTMLCNAQSSSLTLRDFTGLRGCNAIDT 60

Query: 241 MRSSN--FRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 414
           +  S    +S VA+  + RR R   FV +AMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  LVRSGETLQSKVAAATYVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 415 EQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLEL 594
           EQ+LLGL+GEGTGIAAKVLKSMGINLKDARVEVEKIIGRG+GFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 595 SLEEA 609
           SLEEA
Sbjct: 181 SLEEA 185



 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 37/88 (42%), Positives = 61/88 (69%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + FV  A+   FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG G+AA+VL+
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215

Query: 475 SMGINLKDARVEVEKIIGRGNGFVAVEI 558
           ++G +  + R +V +++G  N  V   +
Sbjct: 216 NLGADPSNIRTQVIRMVGESNEAVGASV 243

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>CLPC_PEA (P35100) ATP-dependent Clp protease ATP-binding subunit clpC|
           homolog, chloroplast precursor
          Length = 922

 Score =  208 bits (530), Expect = 9e-54
 Identities = 116/185 (62%), Positives = 135/185 (72%), Gaps = 2/185 (1%)
 Frame = +1

Query: 61  MAGTLVLPVALETTFAGRTGGRHWKSHGTRRTPSMLAMSLNRPVRMAAFVGLRSVHSFSA 240
           MA  L   +++    AG    +H  S  ++R+   +       +RM+ F GLR+ +  + 
Sbjct: 1   MARVLAQSLSVPGLVAGHKDSQHKGSGKSKRSVKTMCALRTSGLRMSGFSGLRTFNHLNT 60

Query: 241 MRSS--NFRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 414
           M     +F S V+    SRR R   F+ RAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
Sbjct: 61  MMRPGLDFHSKVSKAVSSRRARAKRFIPRAMFERFTEKAIKVIMLAQEEARRLGHNFVGT 120

Query: 415 EQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLEL 594
           EQ+LLGL+GEGTGIAAKVLKSMGINLKDARVEVEKIIGRG+GFVAVEIPFTPRAKRVLEL
Sbjct: 121 EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL 180

Query: 595 SLEEA 609
           S EEA
Sbjct: 181 SQEEA 185



 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 37/88 (42%), Positives = 61/88 (69%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + FV  A+   FT +A +V+ L+QEEAR+LGHN++G+E +LLGL+ EG G+AA+VL+
Sbjct: 158 GRGSGFV--AVEIPFTPRAKRVLELSQEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 215

Query: 475 SMGINLKDARVEVEKIIGRGNGFVAVEI 558
           ++G +  + R +V +++G     V   +
Sbjct: 216 NLGADPTNIRTQVIRMVGESADSVTATV 243

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>CLPAA_LYCES (P31541) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog CD4A, chloroplast precursor
          Length = 926

 Score =  206 bits (525), Expect = 3e-53
 Identities = 118/186 (63%), Positives = 132/186 (70%), Gaps = 3/186 (1%)
 Frame = +1

Query: 61  MAGTLVLPVALETTFAGRTGGRHWKSHGTRRTPSMLAMSLNRPVRMAAFVGLRSVHSFSA 240
           MA  LV    +  + AG   G+   S   +RT  ML        R+  F GLR  ++   
Sbjct: 2   MARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALDT 61

Query: 241 M---RSSNFRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVG 411
           +         S VA+  F RR R   FV +AMFERFTEKAIKVIMLAQEEARRLGHNFVG
Sbjct: 62  LLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVG 121

Query: 412 TEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLE 591
           TEQ+LLGL+GEGTGIAAKVLKSMGINLKDARVEVEKIIGRG+GF+AVEIPFTPRAKRVLE
Sbjct: 122 TEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVLE 181

Query: 592 LSLEEA 609
           LSLEEA
Sbjct: 182 LSLEEA 187



 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 35/88 (39%), Positives = 61/88 (69%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + F+  A+   FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG G+AA+VL+
Sbjct: 160 GRGSGFI--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 217

Query: 475 SMGINLKDARVEVEKIIGRGNGFVAVEI 558
           ++G +  + R +V +++G  +  V   +
Sbjct: 218 NLGADPTNIRTQVIRMVGESSEAVGASV 245

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>CLPA_BRANA (P46523) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog, chloroplast precursor (Fragment)
          Length = 874

 Score =  186 bits (471), Expect = 6e-47
 Identities = 95/106 (89%), Positives = 102/106 (96%)
 Frame = +1

Query: 292 RGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVL 471
           +G+ +  V +AMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ+LLGL+GEGTGIAAKVL
Sbjct: 30  KGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVL 89

Query: 472 KSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
           KSMGINLKDARVEVEKIIGRG+GFVAVEIPFTPRAKRVLELSLEEA
Sbjct: 90  KSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEA 135



 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 37/85 (43%), Positives = 60/85 (70%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + FV  A+   FT +A +V+ L+ EEAR+LGHN++G+E +LLGL+ EG G+AA+VL+
Sbjct: 108 GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLE 165

Query: 475 SMGINLKDARVEVEKIIGRGNGFVA 549
           ++G +  + R +V +++G  N   A
Sbjct: 166 NLGADPSNIRTQVIRMVGENNEVTA 190

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>CLPC_GUITH (O78410) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog
          Length = 819

 Score =  179 bits (455), Expect = 4e-45
 Identities = 91/95 (95%), Positives = 95/95 (100%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ+LLGL+GEGTGIAAKVLKSMG+NLKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGVNLKDAR 60

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
           VEVEKIIGRG+GFVAVEIPFTPRAKRVLELSLEEA
Sbjct: 61  VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEA 95



 Score = 73.2 bits (178), Expect = 6e-13
 Identities = 36/78 (46%), Positives = 58/78 (74%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + FV  A+   FT +A +V+ L+ EEAR+LGHN++GTE +LLGL+ EG G+AA+VL+
Sbjct: 68  GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLE 125

Query: 475 SMGINLKDARVEVEKIIG 528
           ++ ++L   R +V +++G
Sbjct: 126 NLALDLTKVRTQVIRLLG 143

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>CLPC_PORPU (P51332) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog
          Length = 821

 Score =  176 bits (446), Expect = 5e-44
 Identities = 90/95 (94%), Positives = 94/95 (98%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQ+LLGLVGEGTGIAA+VLKSM +NLKDAR
Sbjct: 1   MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLVGEGTGIAAQVLKSMNVNLKDAR 60

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
           VEVEKIIGRG+GFVAVEIPFTPRAKRVLELSLEEA
Sbjct: 61  VEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEA 95



 Score = 72.8 bits (177), Expect = 7e-13
 Identities = 36/78 (46%), Positives = 58/78 (74%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + FV  A+   FT +A +V+ L+ EEAR+LGHN++GTE +L+GLV EG G+AA+VL+
Sbjct: 68  GRGSGFV--AVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLMGLVREGEGVAARVLE 125

Query: 475 SMGINLKDARVEVEKIIG 528
           ++ +++   R EV +++G
Sbjct: 126 NLAVDVSSIRAEVIQMLG 143

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>CLPC_CYACA (Q9TM05) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog
          Length = 854

 Score =  168 bits (425), Expect = 1e-41
 Identities = 80/95 (84%), Positives = 93/95 (97%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFERFTEKA+KVIMLAQEEARRLGHNFVGTEQ+LLG++GEGTG+AAK LKSMGI LKDAR
Sbjct: 32  MFERFTEKAVKVIMLAQEEARRLGHNFVGTEQILLGILGEGTGLAAKALKSMGITLKDAR 91

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
           +EVEKIIGRG+GFVA+EIPFTPRAK++LEL++EE+
Sbjct: 92  IEVEKIIGRGSGFVAIEIPFTPRAKKILELAIEES 126



 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 37/78 (47%), Positives = 56/78 (71%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR + FV  A+   FT +A K++ LA EE+R L HN+VGTE +LLGL+ EG G+AA+VL+
Sbjct: 99  GRGSGFV--AIEIPFTPRAKKILELAIEESRILTHNYVGTEHLLLGLIKEGEGVAARVLE 156

Query: 475 SMGINLKDARVEVEKIIG 528
           ++G++L   R  + ++IG
Sbjct: 157 NLGVDLPKLRSNIIRMIG 174

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>CLPC_ODOSI (P49574) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog
          Length = 885

 Score =  132 bits (333), Expect = 6e-31
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFE+FTE AIKVIML+QEEARR+GHNFVGTEQ+LLG++G+  GI A+ LK   + LK AR
Sbjct: 1   MFEKFTEGAIKVIMLSQEEARRMGHNFVGTEQLLLGIIGQRHGIGARALKKQKVTLKKAR 60

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEE 606
            E+E  IGRG GFVA EIPFTPRAKRVLE+++ E
Sbjct: 61  REIELYIGRGTGFVASEIPFTPRAKRVLEMAVHE 94



 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = +1

Query: 295 GRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           GR   FV   +   FT +A +V+ +A  E + LG NFVGTE +LL L+ E  G+A + L 
Sbjct: 68  GRGTGFVASEI--PFTPRAKRVLEMAVHEGKDLGQNFVGTEHILLALISESDGVAMRTLD 125

Query: 475 SMGINLKDAR 504
            +G+N+   R
Sbjct: 126 KLGVNIPKLR 135

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>CLPC_MYCTU (P0A522) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 848

 Score =  121 bits (303), Expect = 2e-27
 Identities = 59/95 (62%), Positives = 78/95 (82%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFERFT++A +V++LAQEEAR L HN++GTE +LLGL+ EG G+AAK L+S+GI+L+  R
Sbjct: 1   MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            +VE+IIG+G    +  IPFTPRAK+VLELSL EA
Sbjct: 61  SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREA 95



 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVE 516
           FT +A KV+ L+  EA +LGHN++GTE +LLGL+ EG G+AA+VL  +G  L   R +V 
Sbjct: 80  FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139

Query: 517 KIIGRGNGFVAVE 555
           +++    G  A E
Sbjct: 140 QLLSGYQGKEAAE 152

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>CLPC_MYCBO (P0A523) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 848

 Score =  121 bits (303), Expect = 2e-27
 Identities = 59/95 (62%), Positives = 78/95 (82%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFERFT++A +V++LAQEEAR L HN++GTE +LLGL+ EG G+AAK L+S+GI+L+  R
Sbjct: 1   MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVR 60

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            +VE+IIG+G    +  IPFTPRAK+VLELSL EA
Sbjct: 61  SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREA 95



 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVE 516
           FT +A KV+ L+  EA +LGHN++GTE +LLGL+ EG G+AA+VL  +G  L   R +V 
Sbjct: 80  FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139

Query: 517 KIIGRGNGFVAVE 555
           +++    G  A E
Sbjct: 140 QLLSGYQGKEAAE 152

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>CLPC_MYCLE (P24428) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 848

 Score =  119 bits (298), Expect = 7e-27
 Identities = 59/95 (62%), Positives = 76/95 (80%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFERFT++A +V++LAQEEAR L HN++GTE +LLGL+ EG G+AAK L S+GI+L+  R
Sbjct: 1   MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLDSLGISLEAVR 60

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            +VE IIG+G    +  IPFTPRAK+VLELSL EA
Sbjct: 61  SQVEDIIGQGQQAPSGHIPFTPRAKKVLELSLREA 95



 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVE 516
           FT +A KV+ L+  EA +LGHN++GTE +LLGL+ EG G+AA+VL  +G  L   R +V 
Sbjct: 80  FTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVI 139

Query: 517 KIIGRGNGFVAVE 555
           +++    G  A E
Sbjct: 140 QLLSGYQGKEAAE 152

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>CLPC_BACSU (P37571) Negative regulator of genetic competence clpC/mecB|
          Length = 810

 Score =  107 bits (268), Expect = 2e-23
 Identities = 56/95 (58%), Positives = 74/95 (77%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MF RFTE+A KV+ LAQEEA RLGHN +GTE +LLGLV EG GIAAK L+++G+  +  +
Sbjct: 2   MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQ 61

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            EVE +IGRG   ++  I +TPRAK+V+ELS++EA
Sbjct: 62  KEVESLIGRGQE-MSQTIHYTPRAKKVIELSMDEA 95



 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 33/64 (51%), Positives = 52/64 (81%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVE 516
           +T +A KVI L+ +EAR+LGH++VGTE +LLGL+ EG G+AA+VL ++G++L  AR +V 
Sbjct: 80  YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139

Query: 517 KIIG 528
           +++G
Sbjct: 140 QLLG 143

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>CLPB_OCEIH (Q8EU05) Chaperone clpB|
          Length = 809

 Score =  103 bits (258), Expect = 3e-22
 Identities = 56/95 (58%), Positives = 71/95 (74%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MF RFTE+A KV+ L+QEEA RLGHN +GTE +LLGLV EG GIAAK L+S+G+ +   +
Sbjct: 2   MFGRFTERAQKVLALSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQ 61

Query: 505 VEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            EVEK+IG G       I +TPRAK+V+ELS +EA
Sbjct: 62  EEVEKLIGVGKQ-PTQSIHYTPRAKKVVELSQDEA 95



 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 33/64 (51%), Positives = 53/64 (82%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVE 516
           +T +A KV+ L+Q+EAR+LGH++VGTE +LLGL+ EG G+AA+VL ++G++L  AR +V 
Sbjct: 80  YTPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139

Query: 517 KIIG 528
           +++G
Sbjct: 140 QLLG 143

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>CLPC_CHLPN (Q9Z8A6) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 845

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 46/96 (47%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFE+FT +A +VI LA++EA+RL HN++GTE +LLGL+  G G+A  VL+++GI+   AR
Sbjct: 1   MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDTAR 60

Query: 505 VEVEKIIGRGNGFVAVEIP-FTPRAKRVLELSLEEA 609
            EVE++IG G        P  T R K+  E + EEA
Sbjct: 61  QEVERLIGYGPEIQVYGDPALTGRVKKSFESANEEA 96



 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 23/60 (38%), Positives = 38/60 (63%)
 Frame = +1

Query: 340 TEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEK 519
           T +  K    A EEA  L HN+VGTE +LLG++ +   +A +VL+++ I+ ++ R E+ K
Sbjct: 82  TGRVKKSFESANEEASLLEHNYVGTEHLLLGILHQSDSVALQVLENLHIDPREVRKEILK 141

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>CLPC_CHLMU (Q9PKA8) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 870

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 44/96 (45%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFE+FT +A +VI LA++EA+RL HN++GTE +LLGL+  G G+A  VL+++G++   A+
Sbjct: 17  MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAK 76

Query: 505 VEVEKIIGRGNGFVAVEIP-FTPRAKRVLELSLEEA 609
            EVE++IG G        P  T R K+  E + EEA
Sbjct: 77  NEVERLIGYGPEIQVYGDPALTGRVKKSFESANEEA 112



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 29/78 (37%), Positives = 45/78 (57%)
 Frame = +1

Query: 340 TEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEK 519
           T +  K    A EEA  L HN+VGTE +LLG++ +  G+A +VL+++ I+ K+ R E+ K
Sbjct: 98  TGRVKKSFESANEEASILEHNYVGTEHLLLGILNQADGVALQVLENLHIDPKEIRKEILK 157

Query: 520 IIGRGNGFVAVEIPFTPR 573
            +   N  +      TPR
Sbjct: 158 ELETFNLQLPPSSSITPR 175

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>CLPC_CHLTR (O84288) Probable ATP-dependent Clp protease ATP-binding subunit|
          Length = 854

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 44/96 (45%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           MFE+FT +A +VI LA++EA+RL HN++GTE +LLGL+  G G+A  VL+++G++   A+
Sbjct: 1   MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAK 60

Query: 505 VEVEKIIGRGNGF-VAVEIPFTPRAKRVLELSLEEA 609
            EVE++IG G    V  +   T R K+  E + EEA
Sbjct: 61  HEVERLIGYGPEIQVCGDPALTGRVKKSFESANEEA 96



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = +1

Query: 340 TEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEK 519
           T +  K    A EEA  L HN+VGTE +LLG++ +  G+A +VL+++ ++ K+ R E+ K
Sbjct: 82  TGRVKKSFESANEEAALLEHNYVGTEHLLLGILNQSDGVALQVLENLHVDPKEIRKEILK 141

Query: 520 IIGRGNGFVAVEIPFTPR 573
            +   N  +      TPR
Sbjct: 142 ELETFNLQLPPSSSITPR 159

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>ERD1_ARATH (P42762) ERD1 protein, chloroplast precursor|
          Length = 945

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
 Frame = +1

Query: 217 RSVHSFSAMRSSNFRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLG 396
           R++H FS    +N R      RF +R R+      A+FERFTE+AI+ I+ +Q+EA+ LG
Sbjct: 50  RTIHRFSTT-PTNLR------RFPQRKRKKFTPISAVFERFTERAIRAIIFSQKEAKSLG 102

Query: 397 HNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNG------------ 540
            + V T+ +LLGL+ E      +     GI +  AR  V  I    N             
Sbjct: 103 KDMVYTQHLLLGLIAEDRD--PQGFLGSGITIDKAREAVWSIWDEANSDSKQEEASSTSY 160

Query: 541 FVAVEIPFTPRAKRVLELSLE 603
             + ++PF+   KRV E ++E
Sbjct: 161 SKSTDMPFSISTKRVFEAAVE 181

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>HLYB_TREHY (Q54316) Hemolysin B|
          Length = 828

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = +1

Query: 325 MFE-RFTEKAIKVIML-AQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKD 498
           MF+   T KA KVI L AQEEA+RL H+ V  E +LLGL+ E   +A +VL  + I+L  
Sbjct: 1   MFQFHLTSKAKKVIELYAQEEAKRLNHDMVTPEHILLGLLYESEALATRVLMRLKIDLDR 60

Query: 499 ARVEVEK-IIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            ++E+E  ++      V   +P  PR ++++  S EEA
Sbjct: 61  LKLELESAMVKSSTTKVFGTLPTAPRVQKLISRSAEEA 98



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 29/58 (50%), Positives = 40/58 (68%)
 Frame = +1

Query: 355 KVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIG 528
           K+I  + EEAR L HN++GTE +LLGL+ E +G A  VL SMG+ L   R E+ K++G
Sbjct: 89  KLISRSAEEARALSHNYIGTEHLLLGLLREESGTAYNVLTSMGLELTILRQEILKMLG 146

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>CLPB2_STRAW (Q826F2) Chaperone clpB 2|
          Length = 879

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           R T+K+ + +  AQ  A R+GH  V  E +LL L+ +  G+  ++L+  G   K+ R  V
Sbjct: 5   RLTQKSQEALQEAQTAAGRMGHTEVDGEHLLLALLDQEDGLIPRLLQQAGTEPKELRAAV 64

Query: 514 EKIIGR-----GNGFVAVEIPFTPRAKRVLELSLEEA 609
            + +       G G    ++  T R  R+L+ +  EA
Sbjct: 65  REELSHRPKATGPGAAPGQVFVTQRLARLLDAAEREA 101

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>Y2686_MYCBO (P0A525) Hypothetical protein Mb2686|
          Length = 252

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 31/122 (25%), Positives = 54/122 (44%)
 Frame = +1

Query: 244 RSSNFRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQV 423
           +S       A  RF  R    +  +   F RFT +A   ++ AQ  A     + +  + +
Sbjct: 68  KSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEITPDHL 127

Query: 424 LLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLE 603
           LLG++ +   +A  +L+   I++   R  V   +          IPF+  A++VLEL+  
Sbjct: 128 LLGVLTDPAALATALLQQQEIDIATLRTAV--TLPPAVTEPPQPIPFSGPARKVLELTFR 185

Query: 604 EA 609
           EA
Sbjct: 186 EA 187



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLV 438
           F+  A KV+ L   EA RLGHN++GTE +LL L+
Sbjct: 172 FSGPARKVLELTFREALRLGHNYIGTEHLLLALL 205

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>Y2667_MYCTU (P0A524) Hypothetical protein Rv2667/MT2741|
          Length = 252

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 31/122 (25%), Positives = 54/122 (44%)
 Frame = +1

Query: 244 RSSNFRSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQV 423
           +S       A  RF  R    +  +   F RFT +A   ++ AQ  A     + +  + +
Sbjct: 68  KSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEITPDHL 127

Query: 424 LLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLE 603
           LLG++ +   +A  +L+   I++   R  V   +          IPF+  A++VLEL+  
Sbjct: 128 LLGVLTDPAALATALLQQQEIDIATLRTAV--TLPPAVTEPPQPIPFSGPARKVLELTFR 185

Query: 604 EA 609
           EA
Sbjct: 186 EA 187



 Score = 38.1 bits (87), Expect = 0.020
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLV 438
           F+  A KV+ L   EA RLGHN++GTE +LL L+
Sbjct: 172 FSGPARKVLELTFREALRLGHNYIGTEHLLLALL 205

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>CLPA_POPEU (P84565) ATP-dependent Clp protease ATP-binding subunit clpA|
           homolog (Fragments)
          Length = 72

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +1

Query: 532 GNGFVAVEIPFTPRAKRVLELSLEEA 609
           G+GFVAVEIPFTP   RVLELSLEEA
Sbjct: 1   GSGFVAVEIPFTP---RVLELSLEEA 23

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>CLPB2_SYNP7 (O34209) Chaperone clpB 2|
          Length = 895

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 22/66 (33%), Positives = 38/66 (57%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           RFT++A   I+ +Q  AR+L    +  E VLL L+ + +G+AA++L   G+ + + R  +
Sbjct: 8   RFTDQAWDAIVESQTVARQLRQQQLEVEHVLLALLDQESGVAAEILAKAGVAVANLRQPL 67

Query: 514 EKIIGR 531
           E    R
Sbjct: 68  EDFARR 73

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>CLPB1_SYNY3 (P74459) Chaperone clpB 1|
          Length = 898

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 20/66 (30%), Positives = 38/66 (57%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTE+A   I+ +QE ARR  +  +  E +LL L+ +  G+AA++ +   ++ +  R ++
Sbjct: 8   KFTEQAWDAIVKSQEVARRYKNTNLEVEHILLALLEQDMGLAARIFQRAAVDGEGLRQQL 67

Query: 514 EKIIGR 531
           E    R
Sbjct: 68  EIFTNR 73

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>CLPB_PROMM (Q7V8B1) Chaperone clpB|
          Length = 865

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 20/62 (32%), Positives = 39/62 (62%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVE 510
           ++FTEK    I+LAQ+ A++  H  + TE +LL L+ +   +A ++L+  G+++ + +  
Sbjct: 6   DQFTEKGWAAIVLAQQLAQQRKHQQLETEHLLLSLL-QQNALAGRILEKAGVSIGNLQTA 64

Query: 511 VE 516
           VE
Sbjct: 65  VE 66

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>CLPB_FUSNN (Q8RHQ8) Chaperone clpB|
          Length = 857

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 23/75 (30%), Positives = 41/75 (54%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTE  I  I LA + ++      +  E + LGL+ +  G+  +V++ MG+NL+    E+
Sbjct: 5   QFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYIISEL 64

Query: 514 EKIIGRGNGFVAVEI 558
           EK +   N +  VE+
Sbjct: 65  EKEM---NNYPKVEV 76

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>HS101_ORYSA (Q6F2Y7) Heat shock protein 101|
          Length = 912

 Score = 36.6 bits (83), Expect = 0.059
 Identities = 20/59 (33%), Positives = 34/59 (57%)
 Frame = +1

Query: 352 IKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIG 528
           IKVI  AQ   ++ G + +  +Q+LLGL+ +   + +  LK  G++    R E+EK+ G
Sbjct: 92  IKVIRRAQSAQKKRGDSHLAVDQLLLGLLED--SLISDCLKEAGVSAARVRAELEKLRG 148

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>CLPB_BRAJA (Q89UL2) Chaperone clpB|
          Length = 879

 Score = 36.2 bits (82), Expect = 0.077
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGIN------- 489
           E++TE++   I  AQ  A R GH    T  VL  L+ +  G+AA ++   G N       
Sbjct: 4   EKYTERSRGFIQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGNSRAILKA 63

Query: 490 LKDARVEVEKIIGRGNG--FVAVEIPFT 567
            +DA  +V K+ G G G  ++A E+  T
Sbjct: 64  TEDALNKVPKVSGGGAGQIYLAPELART 91

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>CLPB1_SYNP7 (P53533) Chaperone clpB 1|
          Length = 874

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTEKA + I+   + A++  H  + +E + L L+ E  G+A  +LK  G+     +   
Sbjct: 8   QFTEKAWEAIVRTTDVAKQAQHQQIESEHLFLALLQE-PGLALNILKKAGLEAAQLQQFT 66

Query: 514 EKIIGR 531
           E+ I R
Sbjct: 67  ERFIAR 72

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>CLPB_GLOVI (Q7NFE9) Chaperone clpB|
          Length = 872

 Score = 34.7 bits (78), Expect = 0.23
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTEKA   I+   E A+      + +E +   L+ +  G+A  +    G+NL      V
Sbjct: 8   QFTEKAWDAIVRTTEVAKEYRQQQLESEHLFKALLDQDGGLAGSIFTKAGVNLTKLGERV 67

Query: 514 EKIIGR 531
           E+ I R
Sbjct: 68  EQFINR 73

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>CLPB_RHOPA (Q6N1H2) Chaperone clpB|
          Length = 879

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGIN------- 489
           E++TE+    I  AQ  A R GH       +L  L+ +  G+A  ++   G N       
Sbjct: 4   EKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKA 63

Query: 490 LKDARVEVEKIIGRGNGFVAVEIPFTPRAKRVLELSLEEA 609
            ++A  ++ K+ G G G V +  P T RA    E + E+A
Sbjct: 64  TEEALGKMPKVSGSGAGQVYL-APATARAFDAAEKAAEKA 102

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>CLPB_DESVH (Q72AW6) Chaperone clpB|
          Length = 865

 Score = 34.3 bits (77), Expect = 0.29
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTEK+ + +  AQ  A R GH  V  E +   LV +  G+  ++L  MG   +     +
Sbjct: 5   KFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEAFAEAL 64

Query: 514 EKIIGR 531
           E+ +G+
Sbjct: 65  ERELGK 70

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>ZNHI4_MOUSE (Q99PT3) Zinc finger HIT domain-containing protein 4|
           (PAP-1-associated protein 1) (PAPA-1) (High mobility
           group AT-hook 1-like 4)
          Length = 345

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -1

Query: 575 ARGVNGISTATKPLPLPMI-FSTSTRASFRFIPMDLSTFAAIPV-PSPTRPNRTCSVPTK 402
           ARG      A  P P PM+ + +  + S    P  + T  A+   P+P+ P   CSVP  
Sbjct: 244 ARGERRGGRAAAPAPAPMVRYCSGAQGSTLSFPPGVPTPTAVAQRPAPSGPAPRCSVPGC 303

Query: 401 L*PRRLASS 375
             PRR A S
Sbjct: 304 PHPRRYACS 312

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>CLPB_MEIRU (Q7X2S8) Chaperone clpB|
          Length = 854

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVE 510
           ER+TE+A + I  +Q  AR   H+ +    +   ++ +  G+ AK+++  G N ++    
Sbjct: 4   ERYTEQARQAIAQSQVLARESAHSKIDLPHLAAVMLRDAAGLPAKIVQKAGQNPQNIYQA 63

Query: 511 VEKIIGR 531
            +  +GR
Sbjct: 64  AQSELGR 70

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>CLPB_LEPIN (Q8F509) Chaperone clpB|
          Length = 860

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGI 486
           F+  A+ ++  A E  + L   ++ T+ +LLGL+  GTG        +G+
Sbjct: 84  FSRSAVSLLKAADEVRKELKDEYLSTDHILLGLMKNGTGSLKTEFLKLGL 133

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>CLPB_LEPIC (Q72QU2) Chaperone clpB|
          Length = 860

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 337 FTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGI 486
           F+  A+ ++  A E  + L   ++ T+ +LLGL+  GTG        +G+
Sbjct: 84  FSRSAVSLLKAADEVRKELKDEYLSTDHILLGLMKNGTGSLKTEFLKLGL 133

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>CLPB_WOLPM (Q73IE4) Chaperone clpB|
          Length = 853

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTEKA  +I  AQ +A   GH     E +L  ++ + +G+   ++ + G N++     V
Sbjct: 5   KFTEKAKSLIQSAQMKALGAGHQIFMPEHLLKVMLEDESGLVQDLINACGGNVQSISDAV 64

Query: 514 EKII 525
           +  I
Sbjct: 65  DSAI 68

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>ZNHI4_HUMAN (Q9C086) Zinc finger HIT domain-containing protein 4|
           (PAP-1-associated protein 1) (PAPA-1) (High mobility
           group AT-hook 1-like 4)
          Length = 343

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 23/67 (34%), Positives = 29/67 (43%)
 Frame = -1

Query: 575 ARGVNGISTATKPLPLPMIFSTSTRASFRFIPMDLSTFAAIPVPSPTRPNRTCSVPTKL* 396
           ARG      A  P P+    S +  ++  F P   +  A    PSP+ P   CSVP    
Sbjct: 244 ARGERRGGRAAAPAPMVRYCSGAQGSTLSFPPGVPAPTAVSQRPSPSGPPPRCSVPGCPH 303

Query: 395 PRRLASS 375
           PRR A S
Sbjct: 304 PRRYACS 310

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>CLPB2_ANASP (Q8YM56) Chaperone clpB 2|
          Length = 872

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 20/66 (30%), Positives = 35/66 (53%)
 Frame = +1

Query: 334 RFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEV 513
           +FTEKA + I    E A++     + +E ++  L+ E  G+A+ +L   G+NL+      
Sbjct: 8   QFTEKAWEAIAHTPEIAKQHQQQQIESEHLMKALL-EQDGLASGILTKAGVNLQKISDRT 66

Query: 514 EKIIGR 531
           E+ I R
Sbjct: 67  EQYIQR 72

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>Y394_PSEAE (P24562) Hypothetical UPF0001 protein PA0394|
          Length = 230

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -2

Query: 175 TLPTLRESSWFHETSSVDRLYGLQKLSQEQPAGLRSL 65
           T P      W H   SVDRL   Q+LS+++PAGL  L
Sbjct: 87  TRPIAEHFQWVH---SVDRLKIAQRLSEQRPAGLPPL 120

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>CLPB_YERPE (Q74X11) Chaperone clpB|
          Length = 857

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVE 510
           +R T K    +  AQ  A    + F+    ++  L+ +  G    +L S GIN+   R +
Sbjct: 4   DRLTSKFQLALADAQSLALGRDNQFIEPLHLMSALLNQDGGTVRPLLTSAGINVARLRSD 63

Query: 511 VEKIIGR 531
           +E+ +GR
Sbjct: 64  IEQALGR 70

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>TEPA_BACHD (Q9KA93) Translocation-enhancing protein tepA|
          Length = 256

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 298 RRASFVTRAMFERFTEKAIKVIMLAQEEARR-LGHNFVGTEQVLLGLVGEGTGIAAKVLK 474
           R  SFVT+      +E+  K +M ++    R +G N +GT+ V  GL+ E  GI   + K
Sbjct: 180 RVVSFVTK--HSHISEEKFKELMFSKGNLTRDIGTNVIGTDAVTYGLIDEVGGIGKAMQK 237

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>RANB9_HUMAN (Q96S59) Ran-binding protein 9 (RanBP9) (RanBP7) (Ran-binding|
           protein M) (RanBPM) (BPM90) (BPM-L)
          Length = 729

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +3

Query: 435 GWRRHWYCGEGA*VHGYKSEGCPCGSGEDHWEGQRFCCCRNTIHTTC 575
           GW +H Y   G   H + S G     G     G    CC N I+ TC
Sbjct: 246 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTC 292

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>CLPB_BRUSU (Q7CEG6) Chaperone clpB|
          Length = 874

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVE 510
           E++TE+    I  AQ  A   G+     E +L  L+ +  G+AA +++  G  + D R+ 
Sbjct: 4   EKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGRVGDVRMG 63

Query: 511 VEKII 525
           ++  +
Sbjct: 64  LQSAL 68

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>CLPB_BRUME (Q8YJ91) Chaperone clpB|
          Length = 874

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/65 (26%), Positives = 33/65 (50%)
 Frame = +1

Query: 331 ERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVE 510
           E++TE+    I  AQ  A   G+     E +L  L+ +  G+AA +++  G  + D R+ 
Sbjct: 4   EKYTERVRGFIQSAQTFALSSGNQQFTPEHILKVLIDDDEGLAASLVERAGGRVGDVRMG 63

Query: 511 VEKII 525
           ++  +
Sbjct: 64  LQSAL 68

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>RANB9_MOUSE (P69566) Ran-binding protein 9 (RanBP9) (Ran-binding protein M)|
           (RanBPM) (B cell antigen receptor Ig beta-associated
           protein 1) (IBAP-1)
          Length = 653

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +3

Query: 435 GWRRHWYCGEGA*VHGYKSEGCPCGSGEDHWEGQRFCCCRNTIHTTC 575
           GW +H Y   G   H + S G     G     G    CC N I+ TC
Sbjct: 171 GWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTC 217

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>UN84A_HUMAN (O94901) Sad1/unc-84 protein-like 1 (Unc-84 homolog A)|
          Length = 812

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 196 SLQDGLMTLPTLRESSWFHETSSVDRLYGL 107
           SLQD +   P + + SW  E ++VD  +GL
Sbjct: 123 SLQDAVTRRPPVLDESWIREQTTVDHFWGL 152

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>CLPB_PARUW (Q6MD97) Chaperone clpB|
          Length = 868

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 19/67 (28%), Positives = 29/67 (43%)
 Frame = +1

Query: 325 MFERFTEKAIKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDAR 504
           M + FT+   + I  A  EA+RL H  V    +L   + +  G    +L  +G N +   
Sbjct: 1   MNQNFTDHVAEAIQAAFAEAQRLNHTEVTENHLLWAFLKDKEGYFYSLLNGLGTNPQKLF 60

Query: 505 VEVEKII 525
            E E  I
Sbjct: 61  QETENNI 67

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>LAMA4_HUMAN (Q16363) Laminin alpha-4 chain precursor|
          Length = 1823

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +3

Query: 477 HGYKSEGCPC---GSGEDHWEGQRFC--CCRNTIHTTCKTCFRAFIGGS 608
           H    E  PC   G+  +  +G  +C  C RNT    C+ C   +IG S
Sbjct: 73  HTLSGECVPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDS 121

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>TM16F_MOUSE (Q6P9J9) Transmembrane protein 16F|
          Length = 911

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = -1

Query: 473 LSTFAAIPVPSPTRPNRTCSVPTKL*PRRLASSCASIMTFIAFSV---NLSNIALVTKEA 303
           LS F       P  PN T  +   L P+   S  ASI++FI   +       +A++    
Sbjct: 479 LSVFIVFSTTLPKNPNGTDPIQKYLTPQMATSITASIISFIIIMILNTIYEKVAIMITNF 538

Query: 302 RLPRLENL*DATVDLKL 252
            LPR +   + ++ +K+
Sbjct: 539 ELPRTQTDYENSLTMKM 555

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>HS101_ARATH (P42730) Heat shock protein 101|
          Length = 911

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/60 (28%), Positives = 31/60 (51%)
 Frame = +1

Query: 352 IKVIMLAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVEVEKIIGR 531
           IKVI  AQ   +  G   +  +Q+++GL+ +       +L  +G+     + EVEK+ G+
Sbjct: 90  IKVIRRAQAAQKSRGDTHLAVDQLIMGLLEDSQ--IRDLLNEVGVATARVKSEVEKLRGK 147

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>LAMA4_MOUSE (P97927) Laminin alpha-4 chain precursor|
          Length = 1816

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +3

Query: 498 CPC-GSGEDHWEGQRFC--CCRNTIHTTCKTCFRAFIGGS 608
           C C G+  +  +G  FC  C RNT    C+ C   +IG S
Sbjct: 82  CDCNGNSHECLDGSGFCLHCQRNTTGEHCEKCLDGYIGDS 121

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>FEN1A_ORYSA (Q9SXQ6) Flap endonuclease 1a (EC 3.1.-.-) (OsFEN-1a)|
          Length = 380

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
 Frame = +1

Query: 109 GRTGGRHWKSHGTRRTPSMLAMSLNRPVRMAAFVGLRSVHSFSAMRSSNFRSTVASYRFS 288
           GRTG     +     T  +  M  NR +R+    G++ V+ F   +  + +    + R+S
Sbjct: 47  GRTGMETLTNEAGEVTSHLQGM-FNRTIRLLE-AGIKPVYVFDG-KPPDLKKQELAKRYS 103

Query: 289 RRGRRASFVTRAM-------FERFTEKAIKVIMLAQEEARRL 393
           +R      +T A+        E+F+++ +KV     EE +RL
Sbjct: 104 KREDATKELTEAVEEGDKDAIEKFSKRTVKVTKQHNEECKRL 145

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>GRP1_HORVU (P17816) Glycine-rich cell wall structural protein precursor|
          Length = 200

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +3

Query: 429 GSGWRRHWYCGEGA*VHGYKSEGCPC-GSGEDHWEGQRF--CCCRNTIHTTCKTCFRA 593
           G G   H + GEG   +G    G P  G G  H  G+    CC    +H  C+ C RA
Sbjct: 135 GGGGGYHGHGGEGGGGYGGGGGGYPGHGGGGGHGGGRCKWGCCGHGFLHHGCRCCARA 192

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>PROC_HUMAN (P04070) Vitamin K-dependent protein C precursor (EC 3.4.21.69)|
           (Autoprothrombin IIA) (Anticoagulant protein C) (Blood
           coagulation factor XIV) [Contains: Vitamin K-dependent
           protein C light chain; Vitamin K-dependent protein C
           heavy chain; Act
          Length = 461

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +3

Query: 456 CGEGA*VHGYKSEGCPCGSGEDHWEGQRFC 545
           CG G  + G  S  C C SG   WEG RFC
Sbjct: 106 CGHGTCIDGIGSFSCDCRSG---WEG-RFC 131

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>EXOC2_CAEEL (Q22706) Probable exocyst complex component 2 (Exocyst complex|
           component Sec5)
          Length = 884

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 16/48 (33%), Positives = 31/48 (64%)
 Frame = +1

Query: 367 LAQEEARRLGHNFVGTEQVLLGLVGEGTGIAAKVLKSMGINLKDARVE 510
           LAQE  ++ G+N + T+++L+  VG+   I AK L ++G  +++  V+
Sbjct: 654 LAQEPGQKKGNNEITTKKLLIA-VGDIEFIIAKTLNNVGKKMQECGVK 700

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>NCAP_IAWIL (P15682) Nucleoprotein|
          Length = 498

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
 Frame = +1

Query: 88  ALETTFAGRTGGRHWKSHGTRRTPSMLA---MSLNRPVRMAAFVGLRSVHSFSAMRSSNF 258
           A+ T   G T  +   S      P+      +  +RP  MAAF G       +  R+S+ 
Sbjct: 387 AIRTRSGGNTNQQRASSGQISIQPTFSVQRNLPFDRPTIMAAFTGN------TEGRTSDM 440

Query: 259 RSTVASYRFSRRGRRASFVTRAMFERFTEKAIKVIM 366
           R+ +     S R    SF  R +FE   EKA   I+
Sbjct: 441 RTEIIRLMESARPEDVSFQGRGVFELSDEKAASPIV 476


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,200,091
Number of Sequences: 219361
Number of extensions: 2062085
Number of successful extensions: 7198
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 6908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7186
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result